[Bio] / SubsystemExtension Repository:
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Index of /SubsystemExtension

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File (rev) Rev. Age Author Last log entry
 Parent Directory        
SubsystemCandidateFactory/        
SubsystemCandidate/        
SequenceFactory/        
RoleCandidateFactory/        
RoleCandidate/        
GeckoInterface/        
FigWebServices/        
FigKernelScripts/        
ExtensionInterface/        
ClusterView/        
subsystem_extension.pl  1.3  13 years  heiko  will always create variant prediction now
multiple_subsystem_extension.pl  1.3  12 years  overbeek  RAE: Adding automatic subsystems extension and queue to Heikos tool
gecko.pl  1.1  13 years  olson  Rearrangement for easier installation.
evaluate_gecko_joining.pl  1.1  13 years  olson  Rearrangement for easier installation.
evaluate_gecko.pl  1.1  13 years  olson  Rearrangement for easier installation.
cluster_detection.pl  1.1  13 years  olson  Rearrangement for easier installation.
check_subsystem_extension.pl  1.1  12 years  overbeek  RAE: Adding automatic subsystems extension and queue to Heikos tool
aeos.pl  1.1  13 years  olson  Rearrangement for easier installation.
VariantAnalysis.pm  1.4  12 years  heiko  will tolerate non-numerical variants
ValidationInterface.pm  1.2  13 years  heiko  variant output added
SubsystemVariant.pm  1.2  13 years  heiko  output added, better scoring model
SubsystemCandidateFactory.pm  1.3  12 years  overbeek  RAE: Updating default extension values
SubsystemCandidate.pm  1.6  13 years  heiko  better score visulaization
SequenceFactory.pm  1.1.1.1  13 years  heiko  Initial import
RoleFamilies.pm  1.1.1.1  13 years  heiko  Initial import
RoleCandidateScore.pm  1.3  12 years  heiko  Changes in the scoring scheme, adapted -log(e-value) to 181 for 0.0 values.
RoleCandidateMatch.pm  1.2  13 years  heiko  added length to gfx output
RoleCandidateFactory.pm  1.3  12 years  overbeek  RAE: Updating default extension values
RoleCandidate.pm  1.4  12 years  heiko  added sub matched_peg
Makefile  1.4  12 years  overbeek  RAE: Adding automatic subsystems extension and queue to Heikos tool
JoinedCluster.pm  1.1.1.1  13 years  heiko  Initial import
GeckoInterface.pm  1.1.1.1  13 years  heiko  Initial import
GeckoConfig.pm  1.1.1.1  13 years  heiko  Initial import
ExtensionInterface.pm  1.1.1.1  13 years  heiko  Initial import
ExtensionConfig.pm  1.6  12 years  heiko  added MULTIPLEROLES flag
ClusterView.pm  1.1.1.1  13 years  heiko  Initial import
ClusterList.pm  1.1.1.1  13 years  heiko  Initial import
ClusterDetectionSparse.pm  1.1.1.1  13 years  heiko  Initial import
ClusterDetectionArray.pm  1.1.1.1  13 years  heiko  Initial import
ClusterDetection.pm  1.1.1.1  13 years  heiko  Initial import
Cluster.pm  1.1.1.1  13 years  heiko  Initial import
AEOS.pm  1.4  12 years  heiko  added MULTIPLEROLES flag

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