[Bio] / SubsystemExtension Repository:
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Index of /SubsystemExtension

Files shown:32
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File Rev. Age Author Last log entry
 Parent Directory        
ClusterView/        
ExtensionInterface/        
FigKernelScripts/        
FigWebServices/        
GeckoInterface/        
RoleCandidate/        
RoleCandidateFactory/        
SequenceFactory/        
SubsystemCandidate/        
SubsystemCandidateFactory/        
RoleCandidateScore.pm  1.3  12 years  heiko  Changes in the scoring scheme, adapted -log(e-value) to 181 for 0.0 values.
ClusterDetectionArray.pm  1.1.1.1  12 years  heiko  Initial import
GeckoInterface.pm  1.1.1.1  12 years  heiko  Initial import
GeckoConfig.pm  1.1.1.1  12 years  heiko  Initial import
JoinedCluster.pm  1.1.1.1  12 years  heiko  Initial import
ClusterList.pm  1.1.1.1  12 years  heiko  Initial import
ClusterDetectionSparse.pm  1.1.1.1  12 years  heiko  Initial import
ClusterDetection.pm  1.1.1.1  12 years  heiko  Initial import
Cluster.pm  1.1.1.1  12 years  heiko  Initial import
RoleFamilies.pm  1.1.1.1  12 years  heiko  Initial import
SequenceFactory.pm  1.1.1.1  12 years  heiko  Initial import
ClusterView.pm  1.1.1.1  12 years  heiko  Initial import
ExtensionInterface.pm  1.1.1.1  12 years  heiko  Initial import
check_subsystem_extension.pl  1.1  12 years  overbeek  RAE: Adding automatic subsystems extension and queue to Heikos tool
multiple_subsystem_extension.pl  1.3  12 years  overbeek  RAE: Adding automatic subsystems extension and queue to Heikos tool
Makefile  1.4  12 years  overbeek  RAE: Adding automatic subsystems extension and queue to Heikos tool
RoleCandidateFactory.pm  1.3  12 years  overbeek  RAE: Updating default extension values
SubsystemCandidateFactory.pm  1.3  12 years  overbeek  RAE: Updating default extension values
evaluate_gecko.pl  1.1  12 years  olson  Rearrangement for easier installation.
cluster_detection.pl  1.1  12 years  olson  Rearrangement for easier installation.
evaluate_gecko_joining.pl  1.1  12 years  olson  Rearrangement for easier installation.
aeos.pl  1.1  12 years  olson  Rearrangement for easier installation.
gecko.pl  1.1  12 years  olson  Rearrangement for easier installation.
ExtensionConfig.pm  1.6  12 years  heiko  added MULTIPLEROLES flag
AEOS.pm  1.4  12 years  heiko  added MULTIPLEROLES flag
RoleCandidateMatch.pm  1.2  12 years  heiko  added length to gfx output
RoleCandidate.pm  1.4  12 years  heiko  added sub matched_peg
SubsystemCandidate.pm  1.6  12 years  heiko  better score visulaization
SubsystemVariant.pm  1.2  12 years  heiko  output added, better scoring model
ValidationInterface.pm  1.2  12 years  heiko  variant output added
subsystem_extension.pl  1.3  12 years  heiko  will always create variant prediction now
VariantAnalysis.pm  1.4  12 years  heiko  will tolerate non-numerical variants

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