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Revision 1.70 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Feb 11 19:26:15 2015 UTC (4 years, 9 months ago) by olson
Branch: MAIN
CVS Tags: HEAD
Changes since 1.69: +4 -1 lines
Diff to previous 1.69
add compare regions links

Revision 1.69 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jun 16 23:38:23 2011 UTC (8 years, 5 months ago) by redwards
Branch: MAIN
Changes since 1.68: +2 -2 lines
Diff to previous 1.68
Removing duplicates from columns list

Revision 1.68 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 21 15:41:58 2011 UTC (8 years, 7 months ago) by olson
Branch: MAIN
Changes since 1.67: +12 -9 lines
Diff to previous 1.67
when user subset is missing don't crash

Revision 1.67 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Jan 29 22:28:01 2011 UTC (8 years, 10 months ago) by redwards
Branch: MAIN
CVS Tags: myrast_33
Changes since 1.66: +3 -2 lines
Diff to previous 1.66
merging diagram and illustration menus

Revision 1.66 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jan 27 22:37:23 2011 UTC (8 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.65: +3 -1 lines
Diff to previous 1.65
Speedups; begin support for fcgi server.

Revision 1.65 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jan 21 20:25:21 2011 UTC (8 years, 10 months ago) by redwards
Branch: MAIN
Changes since 1.64: +8 -1 lines
Diff to previous 1.64
Adding phage as a choice!

Revision 1.64 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jun 17 18:22:23 2010 UTC (9 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.63: +1 -1 lines
Diff to previous 1.63
Some more FF fixes.

Revision 1.63 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jun 16 21:57:36 2010 UTC (9 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.62: +14 -8 lines
Diff to previous 1.62
Changes to support new figfams interface.

Revision 1.62 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Aug 14 10:02:18 2009 UTC (10 years, 3 months ago) by bartels
Branch: MAIN
Changes since 1.61: +5 -3 lines
Diff to previous 1.61
added a feature to check genomes with certain variants

Revision 1.61 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jul 3 09:16:54 2009 UTC (10 years, 5 months ago) by bartels
Branch: MAIN
Changes since 1.60: +11 -9 lines
Diff to previous 1.60
hopefully resolved the bug that checking a column does not work

Revision 1.60 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jun 29 10:00:12 2009 UTC (10 years, 5 months ago) by bartels
Branch: MAIN
Changes since 1.59: +4 -1 lines
Diff to previous 1.59
added a user for resolve_paralogs.cgi

Revision 1.59 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jun 26 14:10:35 2009 UTC (10 years, 5 months ago) by bartels
Branch: MAIN
Changes since 1.58: +6 -1 lines
Diff to previous 1.58
added a button for resolving paralogs

Revision 1.58 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jun 11 15:04:10 2009 UTC (10 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.57: +9 -3 lines
Diff to previous 1.57
*** empty log message ***

Revision 1.57 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jun 11 12:57:37 2009 UTC (10 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.56: +7 -4 lines
Diff to previous 1.56
added prteference for -1 variants and solved a bug where coloring by attributes would not work

Revision 1.56 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 2 12:05:41 2009 UTC (10 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.55: +1 -1 lines
Diff to previous 1.55
solved an excel export problem

Revision 1.55 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 2 11:48:24 2009 UTC (10 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.54: +1 -1 lines
Diff to previous 1.54
*** empty log message ***

Revision 1.54 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 2 11:39:04 2009 UTC (10 years, 6 months ago) by bartels
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Changes since 1.53: +4 -4 lines
Diff to previous 1.53
*** empty log message ***

Revision 1.53 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 2 11:24:29 2009 UTC (10 years, 6 months ago) by bartels
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Changes since 1.52: +3 -3 lines
Diff to previous 1.52
*** empty log message ***

Revision 1.52 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 2 11:17:06 2009 UTC (10 years, 6 months ago) by bartels
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Changes since 1.51: +2 -2 lines
Diff to previous 1.51
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Revision 1.51 - (view) (download) (as text) (annotate) - [select for diffs]
Wed May 13 14:29:48 2009 UTC (10 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.50: +7 -4 lines
Diff to previous 1.50
fixed a bug where comments were not ignored in annotations

Revision 1.50 - (view) (download) (as text) (annotate) - [select for diffs]
Tue May 12 13:32:45 2009 UTC (10 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.49: +0 -1 lines
Diff to previous 1.49
deleted use ImageMagick

Revision 1.49 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jan 5 11:41:53 2009 UTC (10 years, 11 months ago) by bartels
Branch: MAIN
Changes since 1.48: +7 -0 lines
Diff to previous 1.48
added a filter for number of clustered cells per genome (request by Ross)

Revision 1.48 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Dec 9 15:29:27 2008 UTC (11 years ago) by bartels
Branch: MAIN
Changes since 1.47: +58 -19 lines
Diff to previous 1.47
added a color function and some filters to the table

Revision 1.47 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Oct 24 10:15:31 2008 UTC (11 years, 1 month ago) by bartels
Branch: MAIN
Changes since 1.46: +1 -2 lines
Diff to previous 1.46
bugfix

Revision 1.46 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Oct 21 11:13:34 2008 UTC (11 years, 1 month ago) by bartels
Branch: MAIN
Changes since 1.45: +164 -22 lines
Diff to previous 1.45
bugfix and addition of color by sims

Revision 1.45 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Oct 17 13:38:51 2008 UTC (11 years, 1 month ago) by bartels
Branch: MAIN
Changes since 1.44: +49 -36 lines
Diff to previous 1.44
bugfix...

Revision 1.44 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Oct 16 13:35:25 2008 UTC (11 years, 1 month ago) by bartels
Branch: MAIN
Changes since 1.43: +51 -26 lines
Diff to previous 1.43
color by figfams added

Revision 1.43 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Oct 7 09:37:01 2008 UTC (11 years, 2 months ago) by bartels
Branch: MAIN
Changes since 1.42: +3 -1 lines
Diff to previous 1.42
added menu entry for subsets

Revision 1.42 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Sep 25 08:25:23 2008 UTC (11 years, 2 months ago) by bartels
Branch: MAIN
Changes since 1.41: +1 -1 lines
Diff to previous 1.41
bugfix (OlgaZs problem with collapsing)

Revision 1.41 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Sep 22 14:02:49 2008 UTC (11 years, 2 months ago) by bartels
Branch: MAIN
Changes since 1.40: +7 -5 lines
Diff to previous 1.40
rna elements are now correctly shown

Revision 1.40 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 16 15:17:15 2008 UTC (11 years, 2 months ago) by bartels
Branch: MAIN
Changes since 1.39: +195 -257 lines
Diff to previous 1.39
*** empty log message ***

Revision 1.39 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Sep 5 08:55:10 2008 UTC (11 years, 3 months ago) by bartels
Branch: MAIN
Changes since 1.38: +2 -2 lines
Diff to previous 1.38
put the tax id behind the genome name

Revision 1.38 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 14 20:03:45 2008 UTC (11 years, 3 months ago) by bartels
Branch: MAIN
Changes since 1.37: +4 -3 lines
Diff to previous 1.37
changed link from old protein page to seedviewer and made button RED !

Revision 1.37 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jul 31 14:25:26 2008 UTC (11 years, 4 months ago) by bartels
Branch: MAIN
Changes since 1.36: +5 -1 lines
Diff to previous 1.36
*** empty log message ***

Revision 1.36 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jul 28 15:24:13 2008 UTC (11 years, 4 months ago) by bartels
Branch: MAIN
Changes since 1.35: +5 -2 lines
Diff to previous 1.35
*** empty log message ***

Revision 1.35 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jul 7 18:51:28 2008 UTC (11 years, 5 months ago) by bartels
Branch: MAIN
Changes since 1.34: +2 -1 lines
Diff to previous 1.34
*** empty log message ***

Revision 1.34 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jun 18 19:44:11 2008 UTC (11 years, 5 months ago) by bartels
Branch: MAIN
Changes since 1.33: +46 -20 lines
Diff to previous 1.33
fixed a bug

Revision 1.33 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jun 16 15:38:39 2008 UTC (11 years, 5 months ago) by bartels
Branch: MAIN
Changes since 1.32: +9 -2 lines
Diff to previous 1.32
*** empty log message ***

Revision 1.32 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jun 12 18:02:44 2008 UTC (11 years, 5 months ago) by bartels
Branch: MAIN
Changes since 1.31: +1 -1 lines
Diff to previous 1.31
*** empty log message ***

Revision 1.31 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jun 11 22:03:18 2008 UTC (11 years, 5 months ago) by bartels
Branch: MAIN
Changes since 1.30: +206 -12 lines
Diff to previous 1.30
added all that region stuff

Revision 1.30 - (view) (download) (as text) (annotate) - [select for diffs]
Fri May 23 16:36:16 2008 UTC (11 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.29: +24 -14 lines
Diff to previous 1.29
bugfix

Revision 1.29 - (view) (download) (as text) (annotate) - [select for diffs]
Mon May 19 20:54:08 2008 UTC (11 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.28: +1 -0 lines
Diff to previous 1.28
fixed the variant code bug...

Revision 1.28 - (view) (download) (as text) (annotate) - [select for diffs]
Mon May 19 19:55:49 2008 UTC (11 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.27: +2 -2 lines
Diff to previous 1.27
Emptycells are now IN

Revision 1.27 - (view) (download) (as text) (annotate) - [select for diffs]
Mon May 19 18:04:34 2008 UTC (11 years, 6 months ago) by bartels
Branch: MAIN
Changes since 1.26: +6 -4 lines
Diff to previous 1.26
*** empty log message ***

Revision 1.26 - (view) (download) (as text) (annotate) - [select for diffs]
Thu May 8 16:21:28 2008 UTC (11 years, 7 months ago) by bartels
Branch: MAIN
Changes since 1.25: +2 -2 lines
Diff to previous 1.25
hovers are now everywhere !

Revision 1.25 - (view) (download) (as text) (annotate) - [select for diffs]
Mon May 5 15:25:41 2008 UTC (11 years, 7 months ago) by bartels
Branch: MAIN
Changes since 1.24: +43 -34 lines
Diff to previous 1.24
edited escaped ssnames

Revision 1.24 - (view) (download) (as text) (annotate) - [select for diffs]
Thu May 1 21:44:08 2008 UTC (11 years, 7 months ago) by bartels
Branch: MAIN
Changes since 1.23: +39 -2 lines
Diff to previous 1.23
*** empty log message ***

Revision 1.23 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Apr 25 20:58:44 2008 UTC (11 years, 7 months ago) by bartels
Branch: MAIN
Changes since 1.22: +51 -21 lines
Diff to previous 1.22
hope subsets do function as intended now

Revision 1.22 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Apr 21 15:52:16 2008 UTC (11 years, 7 months ago) by bartels
Branch: MAIN
Changes since 1.21: +115 -52 lines
Diff to previous 1.21
bugfix

Revision 1.21 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 9 18:18:07 2008 UTC (11 years, 8 months ago) by bartels
Branch: MAIN
Changes since 1.20: +20 -7 lines
Diff to previous 1.20
added expert annotations to attribute list (color by)

Revision 1.20 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Apr 7 21:03:20 2008 UTC (11 years, 8 months ago) by bartels
Branch: MAIN
Changes since 1.19: +1 -1 lines
Diff to previous 1.19
changed just the menu

Revision 1.19 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Mar 20 19:25:35 2008 UTC (11 years, 8 months ago) by bartels
Branch: MAIN
Changes since 1.18: +4 -2 lines
Diff to previous 1.18
changed some little things

Revision 1.18 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Mar 17 20:03:50 2008 UTC (11 years, 8 months ago) by bartels
Branch: MAIN
Changes since 1.17: +1 -3 lines
Diff to previous 1.17
*** empty log message ***

Revision 1.17 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Mar 17 20:03:12 2008 UTC (11 years, 8 months ago) by bartels
Branch: MAIN
Changes since 1.16: +13 -1 lines
Diff to previous 1.16
added user preference for sorting spreadsheet

Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Mar 12 15:08:50 2008 UTC (11 years, 9 months ago) by bartels
Branch: MAIN
Changes since 1.15: +9 -4 lines
Diff to previous 1.15
*** empty log message ***

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Mar 11 15:31:11 2008 UTC (11 years, 9 months ago) by bartels
Branch: MAIN
Changes since 1.14: +1 -1 lines
Diff to previous 1.14
*** empty log message ***

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Mar 6 17:20:29 2008 UTC (11 years, 9 months ago) by bartels
Branch: MAIN
Changes since 1.13: +16 -133 lines
Diff to previous 1.13
added Tobi's new OrganismSelect to the page...

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Mar 3 17:35:04 2008 UTC (11 years, 9 months ago) by bartels
Branch: MAIN
Changes since 1.12: +14 -12 lines
Diff to previous 1.12
added Missing with matches...

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Feb 26 20:23:04 2008 UTC (11 years, 9 months ago) by bartels
Branch: MAIN
Changes since 1.11: +10 -4 lines
Diff to previous 1.11
added info box instead of long list

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Feb 26 17:33:50 2008 UTC (11 years, 9 months ago) by bartels
Branch: MAIN
Changes since 1.10: +224 -70 lines
Diff to previous 1.10
added show missing with matches and some other things...

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jan 17 21:42:34 2008 UTC (11 years, 10 months ago) by bartels
Branch: MAIN
Changes since 1.9: +48 -9 lines
Diff to previous 1.9
*** empty log message ***

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Dec 11 21:55:45 2007 UTC (12 years ago) by bartels
Branch: MAIN
Changes since 1.8: +5 -4 lines
Diff to previous 1.8
now writes the seed user, not the ppo userlogin into the subsystem

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 10 20:24:29 2007 UTC (12 years ago) by bartels
Branch: MAIN
Changes since 1.7: +49 -77 lines
Diff to previous 1.7
removed a stupid error so that this should be faster now...

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 10 16:35:53 2007 UTC (12 years ago) by bartels
Branch: MAIN
Changes since 1.6: +9 -1 lines
Diff to previous 1.6
added a confirm for refilling all genomes in the spreadshee
CVSt

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Dec 4 20:52:26 2007 UTC (12 years ago) by bartels
Branch: MAIN
Changes since 1.5: +16 -7 lines
Diff to previous 1.5
fixed that mean cluster coloring bug

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 3 22:42:12 2007 UTC (12 years ago) by bartels
Branch: MAIN
Changes since 1.4: +19 -2 lines
Diff to previous 1.4
added buttons to show and hide -1 variants

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Nov 19 16:26:53 2007 UTC (12 years ago) by bartels
Branch: MAIN
Changes since 1.3: +1 -1 lines
Diff to previous 1.3
*** empty log message ***

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Nov 19 15:51:10 2007 UTC (12 years ago) by bartels
Branch: MAIN
Changes since 1.2: +1179 -141 lines
Diff to previous 1.2
*** empty log message ***

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 16 21:09:00 2007 UTC (12 years, 3 months ago) by bartels
Branch: MAIN
Changes since 1.1: +490 -4 lines
Diff to previous 1.1
*** empty log message ***

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jul 31 21:53:32 2007 UTC (12 years, 4 months ago) by bartels
Branch: MAIN
*** empty log message ***

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