[Bio] Log of /Sprout/SproutSubsys.pm

Revision 1.18 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 9 21:02:10 2008 UTC (11 years, 2 months ago) by parrello
Branch: MAIN
Changes since 1.17: +97 -7 lines
Diff to previous 1.17

Changes for v24 database.

Revision 1.17 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 9 00:27:25 2008 UTC (11 years, 3 months ago) by parrello
Branch: MAIN
Changes since 1.16: +1 -1 lines
Diff to previous 1.16

Changed an Open so that if it fails, it shows up in the RSS feed.

Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Sep 7 03:12:55 2008 UTC (11 years, 3 months ago) by parrello
Branch: MAIN
Changes since 1.15: +2 -2 lines
Diff to previous 1.15

Added HACK markers to the places that need changing in v24.

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jun 11 17:48:03 2008 UTC (11 years, 5 months ago) by parrello
Branch: MAIN
CVS Tags: mgrast_rel_2008_0806, rast_rel_2008_07_21, rast_rel_2008_08_07
Changes since 1.14: +85 -0 lines
Diff to previous 1.14

Added stub for get_hope_reactions_for_genome.

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Apr 29 20:56:39 2008 UTC (11 years, 7 months ago) by parrello
Branch: MAIN
CVS Tags: rast_rel_2008_06_16, rast_rel_2008_06_18
Changes since 1.13: +50 -9 lines
Diff to previous 1.13

Fixed some bad documentation, added get_roles_for_genome.

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Mar 23 16:34:17 2008 UTC (11 years, 8 months ago) by parrello
Branch: MAIN
CVS Tags: rast_rel_2008_04_23
Changes since 1.12: +17 -2 lines
Diff to previous 1.12

Implemented get_description.

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 6 14:50:08 2007 UTC (12 years ago) by parrello
Branch: MAIN
Changes since 1.11: +189 -24 lines
Diff to previous 1.11

Changed POD format for better compatability with Wiki. Added support for "get_row", "get_hope_reaction", and "get_row_subset".

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jul 16 19:59:33 2007 UTC (12 years, 4 months ago) by parrello
Branch: MAIN
Changes since 1.10: +80 -3 lines
Diff to previous 1.10

Updated to use a more PPO-friendly database structure.

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Apr 10 06:16:22 2007 UTC (12 years, 8 months ago) by parrello
Branch: MAIN
Changes since 1.9: +29 -0 lines
Diff to previous 1.9

Added support for SEED Viewer methods.

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Oct 17 18:45:58 2006 UTC (13 years, 1 month ago) by parrello
Branch: MAIN
Changes since 1.8: +148 -11 lines
Diff to previous 1.8

Added diagram support.

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 05:50:10 2006 UTC (13 years, 5 months ago) by parrello
Branch: MAIN
Changes since 1.7: +2 -0 lines
Diff to previous 1.7

Fixed a space.

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jun 8 19:44:02 2006 UTC (13 years, 6 months ago) by parrello
Branch: MAIN
Changes since 1.6: +1 -1 lines
Diff to previous 1.6

Fixed to use the correct key when trying to access a spreadsheet cell.

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 8 19:51:37 2005 UTC (14 years ago) by parrello
Branch: MAIN
Changes since 1.5: +11 -6 lines
Diff to previous 1.5

Fixed a bug in "get_diagrams".

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 8 18:04:12 2005 UTC (14 years ago) by parrello
Branch: MAIN
Changes since 1.4: +1 -1 lines
Diff to previous 1.4

Fixed a bug in the get_variant_code method.

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Nov 28 22:52:11 2005 UTC (14 years ago) by parrello
Branch: MAIN
Changes since 1.3: +62 -2 lines
Diff to previous 1.3

Fixed some comments.
Added "get_diagrams".

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Oct 20 10:19:30 2005 UTC (14 years, 1 month ago) by parrello
Branch: MAIN
Changes since 1.2: +3 -1 lines
Diff to previous 1.2

Fixed reaction hash table to include only roles with reactions attached. Previously, such roles would map to an empty list.

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Oct 18 20:06:22 2005 UTC (14 years, 1 month ago) by parrello
Branch: MAIN
Changes since 1.1: +2 -0 lines
Diff to previous 1.1

Fixed error in initializing the reaction data.

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Oct 12 03:30:08 2005 UTC (14 years, 1 month ago) by parrello
Branch: MAIN

Added to provide limited Subsystem.pm functionality for Sprout.

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