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revision 1.1, Mon Aug 20 23:28:33 2007 UTC revision 1.3, Tue Feb 5 05:47:32 2008 UTC
# Line 69  Line 69 
69    
70  use strict;  use strict;
71  use Tracer;  use Tracer;
 use DocUtils;  
 use TestUtils;  
72  use Cwd;  use Cwd;
73  use File::Copy;  use File::Copy;
74  use File::Path;  use File::Path;
# Line 113  Line 111 
111              # genomes for each group in a hash.              # genomes for each group in a hash.
112              my %baseGroups = $sprout->GetGroups();              my %baseGroups = $sprout->GetGroups();
113              # Fix it into a hash by super-group.              # Fix it into a hash by super-group.
114              my %coreGroups = Sprout::Fix(%baseGroups);              my %coreGroups = $sprout->Fix(%baseGroups);
115              for my $coreGroup (keys %coreGroups) {              for my $coreGroup (keys %coreGroups) {
116                  # Compute the directory and isure it exists.                  # Compute the directory and isure it exists.
117                  my $superDirectory = "$outDir/$coreGroup";                  my $superDirectory = "$outDir/$coreGroup";
# Line 159  Line 157 
157    
158  =head3 CleanGenomeName  =head3 CleanGenomeName
159    
160  C<< my $cleaned = CleanGenomeName($name); >>      my $cleaned = CleanGenomeName($name);
161    
162  Clean up a genome name so it can be used as a file name.  Clean up a genome name so it can be used as a file name.
163    

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