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revision 1.60, Mon Jan 19 21:46:21 2009 UTC revision 1.61, Mon Mar 2 22:31:59 2009 UTC
# Line 7  Line 7 
7      optimized for searching. In particular, the Feature table contains an extra copy of the      optimized for searching. In particular, the Feature table contains an extra copy of the
8      feature's functional role and a list of possible search terms.</Notes>      feature's functional role and a list of possible search terms.</Notes>
9      <Entities>      <Entities>
10          <Entity name="Genome" keyType="string">          <Entity name="Genome" keyType="float">
11              <DisplayInfo theme="nmpdr" col="3" row="1" />              <DisplayInfo theme="nmpdr" col="3" row="1" />
12              <Notes>A Genome contains the sequence data for a particular individual organism.</Notes>              <Notes>A Genome contains the sequence data for a particular individual organism.</Notes>
13              <Fields>              <Fields>
# Line 176  Line 176 
176              the contig is split into multiple pieces called sequences. The sequences              the contig is split into multiple pieces called sequences. The sequences
177              contain the characters that represent the residues as well as data on the quality of              contain the characters that represent the residues as well as data on the quality of
178              the residue identification.</Notes>              the residue identification.</Notes>
179                <Fields>
180                    <Field name="length" type="counter">
181                        <Notes>Number of base pairs in this contig.</Notes>
182                    </Field>
183                </Fields>
184          </Entity>          </Entity>
185          <Entity name="Sequence" keyType="string">          <Entity name="Sequence" keyType="string">
186              <Notes>A sequence is a continuous piece of a contig. Contigs are split into              <Notes>A sequence is a continuous piece of a contig. Contigs are split into
# Line 970  Line 975 
975                  </IndexFields>                  </IndexFields>
976              </ToIndex>              </ToIndex>
977          </Relationship>          </Relationship>
978          <Relationship name="IsLocatedIn" from="Feature" to="Contig" arity="MM">          <Relationship name="IsLocatedIn" from="Feature" to="Contig" arity="MM" converse="IsLocusFor">
979              <DisplayInfo caption="Is\nLocation\nOf" theme="nmpdr" />              <DisplayInfo caption="Is\nLocation\nOf" theme="nmpdr" />
980              <Notes>This relationship connects a feature to the contig segments that work together              <Notes>This relationship connects a feature to the contig segments that work together
981              to effect it. The segments are numbered sequentially starting from 1. The database is              to effect it. The segments are numbered sequentially starting from 1. The database is

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