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revision 1.5, Thu Feb 7 00:07:03 2008 UTC revision 1.9, Wed May 7 23:09:47 2008 UTC
# Line 77  Line 77 
77    
78  Specify the stage at which to start. The current stages are as follows  Specify the stage at which to start. The current stages are as follows
79    
80  =over 4  =over 8
81    
82  =item 1 Set up directories and check out the source.  =item 1
83    
84  =item 2 Bootstrap and build the new FIG.  Set up directories and check out the source.
85    
86  =item 3 Perform configuration fixes.  =item 2
87    
88  =item 4 Fix file permissions.  Bootstrap and build the new FIG.
89    
90  =item 5 Copy the cover pages.  =item 3
91    
92  =item 6 Copy the drug target files.  Perform configuration fixes.
93    
94    =item 4
95    
96    Fix file permissions.
97    
98    =item 5
99    
100    Copy the cover pages.
101    
102    =item 6
103    
104    Copy the drug target files.
105    
106  =back  =back
107    
# Line 376  Line 388 
388      my %changes = (      my %changes = (
389                     temp_url          => "\$nmpdr_site_url/FIG-Tmp",                     temp_url          => "\$nmpdr_site_url/FIG-Tmp",
390                     cgi_url           => "\$nmpdr_site_url/FIG",                     cgi_url           => "\$nmpdr_site_url/FIG",
391                       temp_base         => "/next/FIG-Tmp",
392                       cgi_base          => "/next/FIG",
393                     template_url      => "\$nmpdr_site_url/templates",                     template_url      => "\$nmpdr_site_url/templates",
394                     dbms              => "mysql",                     dbms              => "mysql",
395                     sproutDbms        => "mysql",                     sproutDbms        => "mysql",
# Line 420  Line 434 
434                     lib               => "\$FIG_Config::fig_disk/dist/releases/$version_rel/$FIG_Config::arch/lib",                     lib               => "\$FIG_Config::fig_disk/dist/releases/$version_rel/$FIG_Config::arch/lib",
435                     wiki_data         => "\$FIG_Config::fig/WikiData",                     wiki_data         => "\$FIG_Config::fig/WikiData",
436                     web_app_db        => "{ -database => 'WebAppBackend', -host => 'bioseed.mcs.anl.gov', -user => 'root' };",                     web_app_db        => "{ -database => 'WebAppBackend', -host => 'bioseed.mcs.anl.gov', -user => 'root' };",
437                       app_name          => "NMPDR",
438                     live_server       => 0,                     live_server       => 0,
439                     sprout_host       => "localhost",                     sprout_host       => "localhost",
440                       ontology_db       => "\$FIG_Config::global/Ontology/ontology.sqlite",
441                       file_images_only  => 1,
442                       error_feed        => "rss2trace.xml",
443                       nmpdr_source      => "\$FIG_Config::fig_disk/dist/releases/current",
444                    );                    );
445      # Pull forward the server values from the current version.      # Pull forward the server values from the current version.
446      for my $serverKey (qw(bbh_server_url sim_server_url pin_server_url pch_server_url use_pch_server)) {      for my $serverKey (qw(bbh_server_url sim_server_url pin_server_url pch_server_url use_pch_server)) {

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