[Bio] View of /Sprout/Genomes.pl

Revision 1.1 - (download) (as text) (annotate)
Mon Jan 19 21:49:02 2009 UTC (10 years, 10 months ago) by parrello
Branch: MAIN
CVS Tags: mgrast_dev_08112011, mgrast_dev_08022011, rast_rel_2014_0912, mgrast_dev_04082011, rast_rel_2010_0928, mgrast_version_3_2, mgrast_dev_12152011, mgrast_dev_06072011, rast_rel_2009_0925, rast_rel_2010_0526, rast_rel_2014_0729, rast_rel_2009_05_18, rast_rel_2010_1206, mgrast_release_3_0, mgrast_dev_03252011, rast_rel_2010_0118, rast_rel_2009_02_05, rast_rel_2011_0119, mgrast_release_3_0_4, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_1, mgrast_dev_03312011, mgrast_release_3_1_2, mgrast_release_3_1_1, mgrast_release_3_1_0, mgrast_dev_04132011, mgrast_dev_04012011, rast_rel_2009_07_09, rast_rel_2010_0827, myrast_33, rast_rel_2011_0928, mgrast_dev_04052011, rast_rel_2009_03_26, mgrast_dev_10262011, HEAD

Tutorial examples.

#!/usr/bin/perl -w
use strict;

use ERDB;

my $erdb = ERDB::GetDatabase('Sprout');

my $qh = $erdb->Get('Genome', 'Genome(complete) = 1', []);

while (my $genome = $qh->Fetch()) {
    my ($id, $name) = $genome->Values(['id', 'scientific-name']);
    print "$id\t$name\n";
}