[Bio] Log of /Sprout/GenomeStats.pl

Revision 1.33 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Apr 29 20:50:13 2008 UTC (11 years, 7 months ago) by parrello
Branch: MAIN
CVS Tags: mgrast_rel_2008_0806, mgrast_rel_2008_0917, mgrast_rel_2008_0919, rast_rel_2008_06_16, rast_rel_2008_06_18, rast_rel_2008_07_21, rast_rel_2008_08_07
Changes since 1.32: +1 -1 lines
Diff to previous 1.32 , to selected 1.21

Changed link to PEG definition page to the new, more compact style.

Revision 1.32 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Mar 23 16:10:47 2008 UTC (11 years, 8 months ago) by parrello
Branch: MAIN
CVS Tags: rast_rel_2008_04_23
Changes since 1.31: +206 -281 lines
Diff to previous 1.31 , to selected 1.21

Reworked to publish to the wiki.

Revision 1.31 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Feb 5 05:47:32 2008 UTC (11 years, 10 months ago) by parrello
Branch: MAIN
Changes since 1.30: +0 -2 lines
Diff to previous 1.30 , to selected 1.21

Removed obsolete use clauses.

Revision 1.30 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 6 14:58:03 2007 UTC (12 years ago) by parrello
Branch: MAIN
Changes since 1.29: +256 -239 lines
Diff to previous 1.29 , to selected 1.21

Changed POD format for better compatability with Wiki.

Revision 1.29 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Aug 20 23:14:33 2007 UTC (12 years, 3 months ago) by parrello
Branch: MAIN
Changes since 1.28: +24 -12 lines
Diff to previous 1.28 , to selected 1.21

Generalized the treatment of special attribute columns so that it's easier to add new ones. Added a special attribute column for phenotype.

Revision 1.28 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Apr 10 06:01:56 2007 UTC (12 years, 8 months ago) by parrello
Branch: MAIN
Changes since 1.27: +37 -21 lines
Diff to previous 1.27 , to selected 1.21

Upgraded to include serotype support. Enhanced for better handling of old versions with different DBDs.

Revision 1.27 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Oct 8 20:55:06 2006 UTC (13 years, 2 months ago) by parrello
Branch: MAIN
Changes since 1.26: +0 -2 lines
Diff to previous 1.26 , to selected 1.21

Fixed the comments.

Revision 1.26 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Oct 8 05:44:55 2006 UTC (13 years, 2 months ago) by parrello
Branch: MAIN
Changes since 1.25: +6 -4 lines
Diff to previous 1.25 , to selected 1.21

Fixed the evil "my my" bug.

Revision 1.25 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Oct 4 16:02:41 2006 UTC (13 years, 2 months ago) by parrello
Branch: MAIN
Changes since 1.24: +24 -7 lines
Diff to previous 1.24 , to selected 1.21

Added an option to suppress checking the old genome counts.

Revision 1.24 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Oct 3 02:48:59 2006 UTC (13 years, 2 months ago) by parrello
Branch: MAIN
Changes since 1.23: +1 -0 lines
Diff to previous 1.23 , to selected 1.21

Fixed default trace level.

Revision 1.23 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 13 04:26:44 2006 UTC (13 years, 2 months ago) by parrello
Branch: MAIN
Changes since 1.22: +1 -1 lines
Diff to previous 1.22 , to selected 1.21

Changed the name of the summary include file to match the web site.

Revision 1.22 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 6 19:28:47 2006 UTC (13 years, 3 months ago) by parrello
Branch: MAIN
Changes since 1.21: +75 -56 lines
Diff to previous 1.21

Added code to generate the organism summary table.

Revision 1.21 - (view) (download) (as text) (annotate) - [selected]
Sun Aug 27 00:05:04 2006 UTC (13 years, 3 months ago) by parrello
Branch: MAIN
Changes since 1.20: +5 -3 lines
Diff to previous 1.20

Added header to subsystem column and changed it from a button to a linked count.

Revision 1.20 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 24 18:13:50 2006 UTC (13 years, 3 months ago) by parrello
Branch: MAIN
Changes since 1.19: +1 -1 lines
Diff to previous 1.19 , to selected 1.21

Turned off the border for the new SS image.

Revision 1.19 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 24 17:29:45 2006 UTC (13 years, 3 months ago) by parrello
Branch: MAIN
Changes since 1.18: +5 -0 lines
Diff to previous 1.18 , to selected 1.21

Added a subsystem button.

Revision 1.18 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 10 07:34:13 2006 UTC (13 years, 4 months ago) by parrello
Branch: MAIN
Changes since 1.17: +2 -4 lines
Diff to previous 1.17 , to selected 1.21

Changed to use the same Sprout methods used in the genome_statistics page. This insures the organism summary tables match the statistics displayed.

Revision 1.17 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jul 13 07:08:42 2006 UTC (13 years, 4 months ago) by parrello
Branch: MAIN
Changes since 1.16: +5 -0 lines
Diff to previous 1.16 , to selected 1.21

Fixed to show "n/d" when the RNA count is zero.

Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 27 16:44:18 2006 UTC (13 years, 5 months ago) by parrello
Branch: MAIN
Changes since 1.15: +1 -1 lines
Diff to previous 1.15 , to selected 1.21

Fixed a comment.

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jun 23 23:12:43 2006 UTC (13 years, 5 months ago) by parrello
Branch: MAIN
Changes since 1.14: +1 -1 lines
Diff to previous 1.14 , to selected 1.21

*** empty log message ***

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jun 23 23:09:04 2006 UTC (13 years, 5 months ago) by parrello
Branch: MAIN
Changes since 1.13: +2 -1 lines
Diff to previous 1.13 , to selected 1.21

Fixed file names used.

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 10:07:00 2006 UTC (13 years, 5 months ago) by parrello
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Changes since 1.12: +1 -1 lines
Diff to previous 1.12 , to selected 1.21

*** empty log message ***

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 10:03:38 2006 UTC (13 years, 5 months ago) by parrello
Branch: MAIN
Changes since 1.11: +3 -3 lines
Diff to previous 1.11 , to selected 1.21

Changed to comma-format the big numbers.

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 08:55:16 2006 UTC (13 years, 5 months ago) by parrello
Branch: MAIN
Changes since 1.10: +1 -1 lines
Diff to previous 1.10 , to selected 1.21

Fixed an error in the parameters used for the counter links.

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 08:52:31 2006 UTC (13 years, 5 months ago) by parrello
Branch: MAIN
Changes since 1.9: +20 -5 lines
Diff to previous 1.9 , to selected 1.21

Enhanced to allow more style control on the table cells.

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 08:10:42 2006 UTC (13 years, 5 months ago) by parrello
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Changes since 1.8: +5 -4 lines
Diff to previous 1.8 , to selected 1.21

*** empty log message ***

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 07:53:45 2006 UTC (13 years, 5 months ago) by parrello
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Changes since 1.7: +7 -4 lines
Diff to previous 1.7 , to selected 1.21

*** empty log message ***

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 07:39:38 2006 UTC (13 years, 5 months ago) by parrello
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Changes since 1.6: +1 -1 lines
Diff to previous 1.6 , to selected 1.21

*** empty log message ***

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 07:33:37 2006 UTC (13 years, 5 months ago) by parrello
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Changes since 1.5: +1 -1 lines
Diff to previous 1.5 , to selected 1.21

*** empty log message ***

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 07:16:57 2006 UTC (13 years, 5 months ago) by parrello
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Changes since 1.4: +1 -1 lines
Diff to previous 1.4 , to selected 1.21

*** empty log message ***

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 07:12:58 2006 UTC (13 years, 5 months ago) by parrello
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Changes since 1.3: +1 -0 lines
Diff to previous 1.3 , to selected 1.21

*** empty log message ***

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 07:01:33 2006 UTC (13 years, 5 months ago) by parrello
Branch: MAIN
Changes since 1.2: +1 -1 lines
Diff to previous 1.2 , to selected 1.21

*** empty log message ***

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 07:00:00 2006 UTC (13 years, 5 months ago) by parrello
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Changes since 1.1: +1 -1 lines
Diff to previous 1.1 , to selected 1.21

*** empty log message ***

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jun 18 05:37:14 2006 UTC (13 years, 5 months ago) by parrello
Branch: MAIN
Diff to selected 1.21

Added to generate statistics tables for the NMPDR organism pages.

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