[Bio] / Sprout / GenomeSaplingLoader.pm Repository:
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revision 1.11, Mon Oct 11 16:22:43 2010 UTC revision 1.12, Thu Oct 14 17:27:37 2010 UTC
# Line 217  Line 217 
217      # Get the Sapling object.      # Get the Sapling object.
218      my $sapling = $self->db();      my $sapling = $self->db();
219      # Get the name of the taxonomy dump directory.      # Get the name of the taxonomy dump directory.
220      my $taxDir = $FIG_Config::taxData || "$FIG_Config::global/Taxonomy";      my $taxDir = "/vol/biodb/ncbi/taxonomy";
221      # The first step is to read in all the names. We will build a hash that maps      # The first step is to read in all the names. We will build a hash that maps
222      # each taxonomy ID to a list of its names. The first scientific name encountered      # each taxonomy ID to a list of its names. The first scientific name encountered
223      # will be saved as the primary name. Only scientific names, synonoyms, and      # will be saved as the primary name. Only scientific names, synonoyms, and

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