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Index of /Sprout

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File Rev. Age Author Last log entry
 Parent Directory        
ERDataBase/        
Shuffler/        
AttrDBRefresh.pl  1.24  11 years  parrello  Converted to new multi-table design concept for attributes.
AttrTime.pl  1.2  11 years  parrello  Removed obsolete use clauses.
AttributeReport.pl  1.4  11 years  parrello  Converted escapeHTML to safer Clean.
AttributeTest.pl  1.5  11 years  parrello  Changed so that it can run on a system without a FIG database.
AttributesDBD.xml  1.10  11 years  parrello  Converted to new multi-table design concept for attributes.
BBHCheck.pl  1.6  11 years  parrello  Removed obsolete use clauses.
Blocks.txt  1.1.1.1  14 years  parrello  no message
CompileTemplate.pl  1.5  11 years  parrello  Removed obsolete use clauses.
ContigDNA.pm  1.3  11 years  parrello  Fixed a POD error.
CorePegs.pl  1.2  11 years  parrello  Added the "orgs" parameter to enable specifying all, all NMPDR, or only core gen...
CustomAttributes.pm  1.34  11 years  parrello  Fixed a bug in the handling of generic patterns in the value list.
DBConvert.pl  1.3  11 years  parrello  Removed obsolete use clauses.
DBQuery.pm  1.8  11 years  parrello  Changed POD format for better compatability with Wiki.
DeleteGenomes.pl  1.3  11 years  parrello  Removed obsolete use clauses.
DrugClean.pl  1.2  11 years  parrello  Removed obsolete use clauses.
DupCheck.pl  1.3  11 years  parrello  Removed obsolete use clauses.
ERDB.pm  1.100  11 years  parrello  Added new methods used by attribute database.
ERDBLoad.pm  1.22  11 years  parrello  Added new methods used by attribute database.
ERDBObject.pm  1.5  11 years  parrello  Removed reference to AddToListMap.
EvCodeRefresh.pl  1.4  11 years  parrello  Converted to new multi-table design concept for attributes.
ExportAttributes.pl  1.2  11 years  parrello  Removed obsolete use clauses.
FIGSproutTest.pl  1.3  14 years  olson  Fixes to put XML file in FIGdisk/FIG.
FidCheck.pm  1.3  11 years  parrello  Changed POD format for better compatability with Wiki.
FigConfigFix.pl  1.3  11 years  parrello  Fixed to properly update the url_base configuration items.
GeneFile.pl  1.4  11 years  parrello  Removed obsolete use clauses.
GenomeStats.pl  1.33  11 years  parrello  Changed link to PEG definition page to the new, more compact style.
LoadFIGTables.pl  1.2  11 years  parrello  Removed obsolete use clauses.
LoadScript.pl  1.4  11 years  parrello  Removed obsolete use clauses.
LoadSproutTables.pl  1.47  11 years  parrello  Removed some incorrect comments.
Makefile  1.20  11 years  golsen  Fix to path for pod2html
MarkupTest.pl  1.3  11 years  parrello  Removed obsolete use clauses.
NMPDRSetup.pl  1.11  11 years  parrello  Added KEGG map support.
NewStuffCheck.pl  1.26  11 years  parrello  Changed the style on a table header.
NmpdrPage.pm  1.1  13 years  parrello  Moved NMPDRPage to Sprout directory.
NmpdrSearch.png  1.2  13 years  parrello  Changed to the globe thingy.
NmpdrSearch.src  1.2  13 years  parrello  Fixed a bad URL.
NmpdrStatus.pl  1.2  11 years  parrello  Removed obsolete use clauses.
NmpdrSwitch.pl  1.2  11 years  parrello  Removed obsolete use clauses.
RHFeatures.pm  1.8  11 years  parrello  Changed viewer link to go to the seed viewer feature page.
RHLigands.pm  1.3  11 years  parrello  Changed POD format for better compatability with Wiki.
RHLocations.pm  1.4  11 years  parrello  Changed POD format for better compatability with Wiki.
ResultHelper.pm  1.5  11 years  parrello  Changed POD format for better compatability with Wiki.
SHDrugSearch.pm  1.11  11 years  parrello  Changed POD format for better compatability with Wiki.
SHGeneSearch.pm  1.3  11 years  parrello  Changed POD format for better compatability with Wiki.
SHOpSearch.pm  1.4  11 years  parrello  Changed POD format for better compatability with Wiki.
SHPropSearch.pm  1.7  11 years  parrello  Changed POD format for better compatability with Wiki.
SHSigGenes.pm  1.19  11 years  parrello  Fixed a typo.
SHSubSearch.pm  1.9  11 years  parrello  Changed title of page.
SHToolSearch.pm  1.5  11 years  parrello  Changed POD format for better compatability with Wiki.
SHWordSearch.pm  1.10  11 years  parrello  Changed POD format for better compatability with Wiki.
SaplingDBD.xml  1.1  11 years  parrello  Initial Sapling DBD.
SearchHelper.pm  1.40  11 years  parrello  Changed hint function to use the new wiki syntax for links.
SetGroup.pl  1.2  11 years  parrello  Removed obsolete use clauses.
SetPermissions.pl  1.8  11 years  parrello  Removed obsolete use clauses.
ShowCounts.pl  1.16  11 years  parrello  Changed to use the new genome menu code for generating genome controls.
SimBlocks.pm  1.11  11 years  parrello  Changed POD format for better compatability with Wiki.
SimBlocksDBD.xml  1.5  13 years  parrello  Replaced field "end" with "endpoint" to fix reserved word problem.
SimLoad.pl  1.11  11 years  parrello  Changed POD format for better compatability with Wiki.
SingleTableLoad.pl  1.3  11 years  parrello  Removed obsolete use clauses.
SiteMeter.html  1.1  11 years  parrello  Added to make SiteMeter code more generally available.
SpanishInquisition.pl  1.2  11 years  parrello  Converted to use StandardSetup.
Sprout.pm  1.113  11 years  parrello  Updated to be more aggressive in the GenomeOf function.
SproutDBD.xml  1.55  11 years  parrello  Converted to work with the new diagrammer.
SproutGFF.pl  1.3  11 years  parrello  Removed obsolete use clauses.
SproutLoad.pm  1.92  11 years  parrello  Added code to pull the corresponding IDs into the feature keyword list.
SproutNotes.htm  1.1.1.1  14 years  parrello  no message
SproutQuery.pm  1.2  13 years  parrello  Fxied obsolete references to the {_erdb} member.
SproutStats.pl  1.2  13 years  parrello  Fxied obsolete references to the {_erdb} member.
SproutSubsys.pm  1.15  11 years  parrello  Added stub for get_hope_reactions_for_genome.
TagCount.pl  1.4  11 years  parrello  Added ability to specify an alternate database and a counter for features change...
locations.pl  1.2  12 years  parrello  Fixed default trace level.
robots.txt  1.3  11 years  parrello  Increased the crawl delay.
startconsole.bat  1.1  14 years  parrello  Added this script for starting a FIG console on Windows machines.
variation.html  1.1.1.1  14 years  parrello  no message

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