[Bio] / MGRASTBackend / mg_compute_figfam_sims.pl Repository:
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revision 1.2, Thu Jul 23 21:18:43 2009 UTC revision 1.3, Thu Jul 23 22:19:52 2009 UTC
# Line 87  Line 87 
87  #$status_db->disconnect();  #$status_db->disconnect();
88    
89  open(E, ">$err") or die "Cannot open $err: $!";  open(E, ">$err") or die "Cannot open $err: $!";
90  open(P, "$FIG_Config::bin/compute_ff_sims $sims_jobdir/.. $fasta $in $out $fam_data 2>&1 |") or die "Cannot run blastall: $!";  open(P, "$FIG_Config::bin/compute_ff_sims $jobdir $fasta $in $out $fam_data 2>&1 |") or die "Cannot run blastall: $!";
91    
92  while (<P>)  while (<P>)
93  {  {

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