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revision 1.1, Sun Mar 16 18:27:02 2008 UTC revision 1.2, Tue May 27 23:41:17 2008 UTC
# Line 8  Line 8 
8    
9  use strict;  use strict;
10  use FIG;  use FIG;
11    use Data::Dumper;
12  use FIG_Config;  use FIG_Config;
13  use File::Basename;  use File::Basename;
14  use File::Copy;  use File::Copy;
# Line 74  Line 75 
75          if ($filetest =~ /qual$/) { $qual_file = $filetest}          if ($filetest =~ /qual$/) { $qual_file = $filetest}
76  }  }
77    
78  unless (-e "$jobdir/raw/$fna_file") {&fatal("Cannot find a fasta file in $jobdir/raw")}  unless ($fna_file && -e "$jobdir/raw/$fna_file") {&fatal("Cannot find a fasta file in $jobdir/raw Expected to find '$fna_file'")}
79  print STDERR "Working on FNA: $fna_file QUAL: $qual_file\n";  print STDERR "Working on FNA: $fna_file QUAL: $qual_file\n";
80    
81    

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