[Bio] / FortyEightMeta / mg_postproc_taxa_sims.pl Repository:
ViewVC logotype

Diff of /FortyEightMeta/mg_postproc_taxa_sims.pl

Parent Directory Parent Directory | Revision Log Revision Log | View Patch Patch

revision 1.7, Sun Jul 8 23:33:32 2007 UTC revision 1.8, Mon Jul 9 15:35:11 2007 UTC
# Line 185  Line 185 
185      #      #
186    
187      my $peg_syns = "$FIG_Config::fortyeight_data/peg.synonyms";      my $peg_syns = "$FIG_Config::fortyeight_data/peg.synonyms";
188        my $exp_sims = "$orgdir/expanded_similarities";
189      &run_pipe(\*STDOUT, "$FIG_Config::bin/expand_sims",      &run_pipe(\*STDOUT, "$FIG_Config::bin/expand_sims",
190                "-orgdir", $orgdir,                "-orgdir", $orgdir,
191                $peg_syns,                $peg_syns,
192                $out_sims, $exp_sims);                "$orgdir/similarities", $exp_sims);
193    
194  #     my $fig = new FIGV($orgdir);  #     my $fig = new FIGV($orgdir);
195    
# Line 199  Line 200 
200    
201  #     my $syns = load_peg_syns($syns_fh);  #     my $syns = load_peg_syns($syns_fh);
202    
 #     my $exp_sims = "$orgdir/expanded_similarities";  
203  #     eval {  #     eval {
204  #       expand_sims($fig, $out_sims, $exp_sims, $syns);  #       expand_sims($fig, $out_sims, $exp_sims, $syns);
205  #     };  #     };

Legend:
Removed from v.1.7  
changed lines
  Added in v.1.8

MCS Webmaster
ViewVC Help
Powered by ViewVC 1.0.3