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Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jun 8 20:58:35 2011 UTC (8 years, 5 months ago) by olson
Branch: MAIN
CVS Tags: mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, rast_rel_2011_0928
Changes since 1.10: +10 -0 lines
Diff to previous 1.10
Spreadsheet export, new script for dumping queue data.

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Nov 22 22:06:13 2010 UTC (8 years, 11 months ago) by olson
Branch: MAIN
CVS Tags: mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, myrast_33, rast_rel_2010_1206, rast_rel_2011_0119
Changes since 1.9: +28 -5 lines
Diff to previous 1.9
add fasta exports

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jan 15 20:26:56 2010 UTC (9 years, 10 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2010_0118, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928
Changes since 1.8: +3 -2 lines
Diff to previous 1.8
adjust signature writing

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jan 15 16:21:23 2010 UTC (9 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.7: +29 -0 lines
Diff to previous 1.7
Invoke the signature generation to the pipeline.

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Nov 4 20:09:13 2009 UTC (10 years ago) by olson
Branch: MAIN
Changes since 1.6: +12 -0 lines
Diff to previous 1.6
Write go mappings to genome direcotry before packing it up.

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Nov 2 22:02:30 2009 UTC (10 years ago) by olson
Branch: MAIN
Changes since 1.5: +8 -0 lines
Diff to previous 1.5
If we haven't corrected frameshifts, run correct_frameshifts -justMark to get the
possible frameshift report.

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 8 21:51:11 2008 UTC (10 years, 11 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2008_12_18, rast_rel_2009_02_05, rast_rel_2009_03_26, rast_rel_2009_05_18, rast_rel_2009_07_09, rast_rel_2009_0925
Changes since 1.4: +31 -20 lines
Diff to previous 1.4
Don't run the verify genome directory if keep_geencalls is enabled.

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Aug 12 20:14:21 2008 UTC (11 years, 3 months ago) by olson
Branch: MAIN
CVS Tags: mgrast_rel_2008_0625, mgrast_rel_2008_0806, mgrast_rel_2008_0917, mgrast_rel_2008_0919, mgrast_rel_2008_0923, mgrast_rel_2008_0924, mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, rast_2008_0924, rast_rel_2008_08_07, rast_rel_2008_09_29, rast_rel_2008_09_30, rast_rel_2008_10_09, rast_rel_2008_10_29, rast_rel_2008_11_24, rast_release_2008_09_29
Changes since 1.3: +34 -0 lines
Diff to previous 1.3
Rollup of RAST release changes.

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Feb 13 19:06:48 2008 UTC (11 years, 9 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2008_04_23, rast_rel_2008_06_16, rast_rel_2008_06_18, rast_rel_2008_07_21
Changes since 1.2: +17 -0 lines
Diff to previous 1.2
Create contig btrees if not already there; this HUGEly accelerates download creation on large genomes.

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Feb 13 18:02:11 2008 UTC (11 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.1: +42 -16 lines
Diff to previous 1.1
Fix exports.

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Feb 11 21:45:26 2008 UTC (11 years, 9 months ago) by olson
Branch: MAIN
Add support for deadline scheduling & job export.

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