[Bio] / FortyEight / rp_make_PFAM_HMM_derived_attributes.pl Repository:
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revision 1.1, Tue Sep 25 19:07:49 2007 UTC revision 1.2, Mon Oct 1 20:58:57 2007 UTC
# Line 2  Line 2 
2  my $genome = shift(@ARGV);  my $genome = shift(@ARGV);
3    
4  my $input_file = $jobdir."/$genome_PFAM_HMM_search_results.txt";  my $input_file = $jobdir."/$genome_PFAM_HMM_search_results.txt";
5  my $output_file = $jobdir."/PFAM_HMM_derived_attributes_for_$genome.txt";  my $output_file = $jobdir."/rp/$genome/PFAM_HMM_derived_attributes_for_$genome.txt";
6    
7  open(IN,"$input_file");  open(IN,"$input_file");
8  open(PFAM,">$output_file");  open(PFAM,">$output_file");

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