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Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Oct 12 15:35:53 2007 UTC (12 years, 1 month ago) by olson
Branch: MAIN
CVS Tags: HEAD, mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_rel_2008_0625, mgrast_rel_2008_0806, mgrast_rel_2008_0917, mgrast_rel_2008_0919, mgrast_rel_2008_0923, mgrast_rel_2008_0924, mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, rast_2008_0924, rast_rel_2008_04_23, rast_rel_2008_06_16, rast_rel_2008_06_18, rast_rel_2008_07_21, rast_rel_2008_08_07, rast_rel_2008_09_29, rast_rel_2008_09_30, rast_rel_2008_10_09, rast_rel_2008_10_29, rast_rel_2008_11_24, rast_rel_2008_12_18, rast_rel_2009_02_05, rast_rel_2009_03_26, rast_rel_2009_05_18, rast_rel_2009_07_09, rast_rel_2009_0925, rast_rel_2010_0118, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119, rast_rel_2011_0928, rast_rel_2014_0729, rast_rel_2014_0912, rast_release_2008_09_29
Changes since 1.3: +2 -0 lines
Diff to previous 1.3
add the FIG bin and external bin dirs to the path so that run_glimmer2 can find stuff.

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Oct 10 20:50:55 2007 UTC (12 years, 1 month ago) by olson
Branch: MAIN
Changes since 1.2: +2 -0 lines
Diff to previous 1.2
Disable contig splitting, quality check, and correction when keep_genecalls is enabled.

Ensure that *.running is set to "no" in all rp_* scripts, both on normal exit and in &fatal.

Fix error returns for failed quality check execution.

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Oct 5 17:25:53 2007 UTC (12 years, 1 month ago) by olson
Branch: MAIN
Changes since 1.1: +1 -1 lines
Diff to previous 1.1
Updates to the Teach stuff. Small mod to build_nr to support condtional setting of sort buffer size.

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Oct 3 20:55:54 2007 UTC (12 years, 1 month ago) by olson
Branch: MAIN
Pipeline scripts for computing critica and glimmer calls for the Teach project.

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