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Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jul 8 20:18:46 2009 UTC (10 years, 6 months ago) by olson
Branch: MAIN
CVS Tags: HEAD, mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, rast_rel_2009_07_09, rast_rel_2009_0925, rast_rel_2010_0118, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119, rast_rel_2011_0928, rast_rel_2014_0729, rast_rel_2014_0912
Changes since 1.4: +32 -13 lines
Diff to previous 1.4 , to selected 1.2
Add support for pulling sims from sims server and submitting only those that don't match to be computed.

Add use of $FIG_Config::rast_sims_data to point at the directory holding
nr & peg.synonyms; explicitly here for the purposes of more easily updating
to new sims databases.

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Mar 16 18:47:00 2009 UTC (10 years, 10 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2009_03_26, rast_rel_2009_05_18
Changes since 1.3: +18 -1 lines
Diff to previous 1.3 , to selected 1.2
Add -include-self flag on rp_chunk_sims that cause the sims to the given fasta file to
be computed. Add that flag to the invocation in check_jobs.pl.

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 5 20:59:03 2007 UTC (12 years, 4 months ago) by olson
Branch: MAIN
CVS Tags: mgrast_rel_2008_0625, mgrast_rel_2008_0806, mgrast_rel_2008_0917, mgrast_rel_2008_0919, mgrast_rel_2008_0923, mgrast_rel_2008_0924, mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, rast_2008_0924, rast_rel_2008_04_23, rast_rel_2008_06_16, rast_rel_2008_06_18, rast_rel_2008_07_21, rast_rel_2008_08_07, rast_rel_2008_09_29, rast_rel_2008_09_30, rast_rel_2008_10_09, rast_rel_2008_10_29, rast_rel_2008_11_24, rast_rel_2008_12_18, rast_rel_2009_02_05, rast_release_2008_09_29
Changes since 1.2: +18 -2 lines
Diff to previous 1.2
Rollup of RAST->SEED import stuff.

Revision 1.2 - (view) (download) (as text) (annotate) - [selected]
Wed Nov 29 15:19:19 2006 UTC (13 years, 1 month ago) by olson
Branch: MAIN
Changes since 1.1: +1 -1 lines
Diff to previous 1.1
Rollup commit of 48hr changes.

Added add_virtual_genome to Subsystem.pm to support UnvSubsys doing
the right thing when handed a FIGV.

Added propagation of 48hr_job thru the various link generation scripts in order for protein.cgi/display_subsys.cgi
to properly show virtual genomes.

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Nov 22 21:01:42 2006 UTC (13 years, 2 months ago) by olson
Branch: MAIN
Diff to selected 1.2
48hr mods

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