[Bio] Log of /FortyEight/Makefile

Revision 1.31 - (view) (download) (annotate) - [select for diffs]
Thu Mar 12 21:20:40 2009 UTC (10 years, 8 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2009_03_26, rast_rel_2009_05_18
Changes since 1.30: +2 -1 lines
Diff to previous 1.30

plasmid rast makefile changes

Revision 1.30 - (view) (download) (annotate) - [select for diffs]
Mon Dec 22 23:33:47 2008 UTC (10 years, 11 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2009_02_05
Changes since 1.29: +11 -2 lines
Diff to previous 1.29

Add support for suexec - if CGI directory contains "public_html", ensure that any
installed CGI scripts and the CGI directory itself are not group or world writable.

Revision 1.29 - (view) (download) (annotate) - [select for diffs]
Fri Nov 7 22:42:29 2008 UTC (11 years, 1 month ago) by olson
Branch: MAIN
CVS Tags: mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, rast_rel_2008_11_24, rast_rel_2008_12_18
Changes since 1.28: +2 -1 lines
Diff to previous 1.28

First working versoin of the peer sims code.

Revision 1.27 - (view) (download) (annotate) - [select for diffs]
Mon Apr 7 20:07:27 2008 UTC (11 years, 8 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2008_04_23
Changes since 1.26: +2 -1 lines
Diff to previous 1.26

Add reset-failed-rp which will fix a job which RP broke for.

Revision 1.26 - (view) (download) (annotate) - [select for diffs]
Wed Apr 2 18:22:12 2008 UTC (11 years, 8 months ago) by olson
Branch: MAIN
Changes since 1.25: +5 -4 lines
Diff to previous 1.25

remove no longer used modules from the makefile

Revision 1.25 - (view) (download) (annotate) - [select for diffs]
Mon Feb 11 21:45:26 2008 UTC (11 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.24: +1 -1 lines
Diff to previous 1.24

Add support for deadline scheduling & job export.

Revision 1.24 - (view) (download) (annotate) - [select for diffs]
Wed Feb 6 22:16:37 2008 UTC (11 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.23: +1 -1 lines
Diff to previous 1.23

Support lustre work directory.

Revision 1.23 - (view) (download) (annotate) - [select for diffs]
Wed Oct 31 23:16:50 2007 UTC (12 years, 1 month ago) by olson
Branch: MAIN
Changes since 1.22: +3 -4 lines
Diff to previous 1.22

Rollup of import changes.

Revision 1.22 - (view) (download) (annotate) - [select for diffs]
Tue Oct 23 18:58:31 2007 UTC (12 years, 1 month ago) by olson
Branch: MAIN
Changes since 1.21: +2 -1 lines
Diff to previous 1.21

Add reset_stage.

Revision 1.21 - (view) (download) (annotate) - [select for diffs]
Thu Oct 11 18:32:16 2007 UTC (12 years, 1 month ago) by olson
Branch: MAIN
Changes since 1.20: +5 -4 lines
Diff to previous 1.20

attribute indexer

Revision 1.20 - (view) (download) (annotate) - [select for diffs]
Thu Oct 11 17:01:32 2007 UTC (12 years, 1 month ago) by mkubal
Branch: MAIN
Changes since 1.19: +4 -1 lines
Diff to previous 1.19

adding PHOBIUS and CELLO scripts

Revision 1.19 - (view) (download) (annotate) - [select for diffs]
Fri Oct 5 17:25:53 2007 UTC (12 years, 2 months ago) by olson
Branch: MAIN
Changes since 1.18: +1 -1 lines
Diff to previous 1.18

Updates to the Teach stuff. Small mod to build_nr to support condtional setting of sort buffer size.

Revision 1.18 - (view) (download) (annotate) - [select for diffs]
Wed Oct 3 20:55:54 2007 UTC (12 years, 2 months ago) by olson
Branch: MAIN
Changes since 1.17: +3 -1 lines
Diff to previous 1.17

Pipeline scripts for computing critica and glimmer calls for the Teach project.

Revision 1.17 - (view) (download) (annotate) - [select for diffs]
Fri Sep 28 20:27:06 2007 UTC (12 years, 2 months ago) by olson
Branch: MAIN
Changes since 1.16: +2 -1 lines
Diff to previous 1.16

remove syntax check

Revision 1.16 - (view) (download) (annotate) - [select for diffs]
Tue Sep 25 19:06:28 2007 UTC (12 years, 2 months ago) by mkubal
Branch: MAIN
Changes since 1.15: +2 -2 lines
Diff to previous 1.15

added pfam attribute generation scripts

Revision 1.15 - (view) (download) (annotate) - [select for diffs]
Tue Sep 25 18:45:53 2007 UTC (12 years, 2 months ago) by olson
Branch: MAIN
Changes since 1.14: +1 -1 lines
Diff to previous 1.14

Add sim submission script

Revision 1.14 - (view) (download) (annotate) - [select for diffs]
Thu Sep 13 19:56:29 2007 UTC (12 years, 2 months ago) by olson
Branch: MAIN
Changes since 1.13: +2 -1 lines
Diff to previous 1.13

new scripts

Revision 1.13 - (view) (download) (annotate) - [select for diffs]
Wed Sep 5 20:59:03 2007 UTC (12 years, 3 months ago) by olson
Branch: MAIN
Changes since 1.12: +6 -1 lines
Diff to previous 1.12

Rollup of RAST->SEED import stuff.

Revision 1.12 - (view) (download) (annotate) - [select for diffs]
Thu Jul 26 19:35:21 2007 UTC (12 years, 4 months ago) by parrello
Branch: MAIN
Changes since 1.11: +5 -5 lines
Diff to previous 1.11

Converted cp -p to cp to avoid a problem with makefiles.

Revision 1.11 - (view) (download) (annotate) - [select for diffs]
Fri Jun 1 16:26:26 2007 UTC (12 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.10: +1 -1 lines
Diff to previous 1.10

Add scenario computation.

Revision 1.10 - (view) (download) (annotate) - [select for diffs]
Thu May 31 17:02:01 2007 UTC (12 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.9: +2 -1 lines
Diff to previous 1.9

new stuf

Revision 1.9 - (view) (download) (annotate) - [select for diffs]
Fri May 11 19:18:04 2007 UTC (12 years, 6 months ago) by paarmann
Branch: MAIN
Changes since 1.8: +3 -1 lines
Diff to previous 1.8

*** empty log message ***

Revision 1.8 - (view) (download) (annotate) - [select for diffs]
Tue Feb 27 21:00:27 2007 UTC (12 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.7: +1 -1 lines
Diff to previous 1.7

move email support to Job48
remove stopligth status
make quality_check set up correction.status and correction.request if corrections needed

Revision 1.7 - (view) (download) (annotate) - [select for diffs]
Thu Feb 1 20:03:54 2007 UTC (12 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.6: +2 -1 lines
Diff to previous 1.6

rollup of 48hr fixes

Revision 1.6 - (view) (download) (annotate) - [select for diffs]
Tue Jan 16 21:09:07 2007 UTC (12 years, 10 months ago) by paczian
Branch: MAIN
Changes since 1.5: +9 -6 lines
Diff to previous 1.5

added subdirectory WebPage

Revision 1.5 - (view) (download) (annotate) - [select for diffs]
Mon Jan 15 21:43:51 2007 UTC (12 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.4: +1 -1 lines
Diff to previous 1.4

Add bbhs support,changes to postproc sims to compute expanded sims the new way

Revision 1.4 - (view) (download) (annotate) - [select for diffs]
Fri Dec 1 21:39:11 2006 UTC (13 years ago) by olson
Branch: MAIN
Changes since 1.3: +2 -1 lines
Diff to previous 1.3

48hr fixes

Revision 1.3 - (view) (download) (annotate) - [select for diffs]
Wed Nov 22 21:01:42 2006 UTC (13 years ago) by olson
Branch: MAIN
Changes since 1.2: +1 -1 lines
Diff to previous 1.2

48hr mods

Revision 1.2 - (view) (download) (annotate) - [select for diffs]
Tue Nov 14 17:26:14 2006 UTC (13 years ago) by olson
Branch: MAIN
Changes since 1.1: +9 -1 lines
Diff to previous 1.1

Adding some utility stuff and the start of the master-check script.

Revision 1.1 - (view) (download) (annotate) - [select for diffs]
Fri Nov 10 17:05:11 2006 UTC (13 years ago) by paarmann
Branch: MAIN
Branch point for: fig

Initial revision

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