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revision 1.16, Tue Sep 25 19:06:28 2007 UTC revision 1.23, Wed Oct 31 23:16:50 2007 UTC
# Line 38  Line 38 
38          create_import_job.pl import_pipeline.pl imp_build_nr.pl imp_prepare_sims.pl imp_process_sims.pl \          create_import_job.pl import_pipeline.pl imp_build_nr.pl imp_prepare_sims.pl imp_process_sims.pl \
39          imp_merge_sims.pl imp_check_tl_sim_status.pl  imp_finish_tl_sims.pl  \          imp_merge_sims.pl imp_check_tl_sim_status.pl  imp_finish_tl_sims.pl  \
40          imp_salvage.pl imp_submit_tl_sims.pl \          imp_salvage.pl imp_submit_tl_sims.pl \
41            rp_HMM_PFAM_search_on_timelogic.pl rp_PFAM_attribute_generation.pl rp_make_PFAM_HMM_derived_attributes.pl \
42          validate_tl_sims.pl \          validate_tl_sims.pl \
43          rp_HMM_PFAM_search_on_timelogic.pl rp_PFAM_attribute_generation.pl rp_make_PFAM_HMM_derived_attributes.pl          rp_critica.pl rp_glimmer.pl rp_gen_teach_sims.pl rp_index_attributes.pl \
44            rp_HMM_PFAM_search_on_timelogic.pl rp_PFAM_attribute_generation.pl rp_make_PFAM_HMM_derived_attributes.pl \
45            rp_CELLO_attribute_generation.pl rp_CELLO_search.pl rp_make_CELLO_attributes.pl \
46            rp_PHOBIUS_attribute_generation.pl rp_PHOBIUS_search.pl rp_make_PHOBIUS_attributes.pl \
47            get_nmpdr_group.pl reset_stage.pl
48    
49    
50  INST_PERL_LIB = $(foreach var, $(PERL_LIB), $(libdir)/$(PKGNAME)/$(var))  INST_PERL_LIB = $(foreach var, $(PERL_LIB), $(libdir)/$(PKGNAME)/$(var))
51  PERL_BIN = $(subst .pl,, $(PERL_BIN_SRC))  PERL_BIN = $(subst .pl,, $(PERL_BIN_SRC))
# Line 103  Line 109 
109          cp  $< $@          cp  $< $@
110    
111  $(bindir)/%: $(TOPDIR)/$(PKGNAME)/%.pl $(TOOL_HDR)  $(bindir)/%: $(TOPDIR)/$(PKGNAME)/%.pl $(TOOL_HDR)
         perl -I.. -c $<  
112          ( cat $(TOOL_HDR) $< > $@; chmod +x $@ )          ( cat $(TOOL_HDR) $< > $@; chmod +x $@ )
113    
114    #       perl -I.. -c $<
115    

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