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1 : paarmann 1.1 #
2 :     # Copyright (c) 2003-2006 University of Chicago and Fellowship
3 :     # for Interpretations of Genomes. All Rights Reserved.
4 :     #
5 :     # This file is part of the SEED Toolkit.
6 :     #
7 :     # The SEED Toolkit is free software. You can redistribute
8 :     # it and/or modify it under the terms of the SEED Toolkit
9 :     # Public License.
10 :     #
11 :     # You should have received a copy of the SEED Toolkit Public License
12 :     # along with this program; if not write to the University of Chicago
13 :     # at info@ci.uchicago.edu or the Fellowship for Interpretation of
14 :     # Genomes at veronika@thefig.info or download a copy from
15 :     # http://www.theseed.org/LICENSE.TXT.
16 :     #
17 :    
18 :     #
19 :     # seed_running_perl.fragement is the piece of perl code that
20 :     # checks to see if the seed server is up, and prints a message and returns
21 :     # if it is not.
22 :     #
23 :     SEED_RUNNING_PERL = seed_running_perl.fragment
24 :    
25 :     PERLCGISCRIPTS := $(subst .pl,,$(wildcard *.cgi))
26 :    
27 : olson 1.4 PERL_BIN_SRC = check_jobs.pl rp_chunk_sims.pl rp_compute_sims.pl rp_postproc_sims.pl \
28 :     rp_auto_assign.pl rp_quality_check.pl rp_correction.pl
29 : olson 1.2
30 : paarmann 1.1 PERL_LIB = \
31 :     WebPage/Login.pm \
32 :     WebPage/UserManagement.pm \
33 :     WebPage/Nosuchpage.pm
34 :    
35 :     INST_PERL_LIB = $(foreach var, $(PERL_LIB), $(libdir)/$(PKGNAME)/$(var))
36 : olson 1.2 PERL_BIN = $(subst .pl,, $(PERL_BIN_SRC))
37 :     INST_PERL_BIN = $(foreach var, $(PERL_BIN), $(bindir)/$(var))
38 : paarmann 1.1
39 :     all: lib
40 :    
41 :     show:
42 :     @echo cgis $(foreach var, $(PERLCGISCRIPTS), $(cgidir)/$(var))
43 :     @echo top $(TOPDIR)
44 :     @echo pkg $(PKGNAME)
45 :     @echo toolhdr $(TOOL_HDR)
46 : olson 1.2
47 :     bin: $(INST_PERL_BIN)
48 : paarmann 1.1
49 :     lib: $(foreach var, $(PERLCGISCRIPTS), $(cgidir)/$(var)) copy_htaccess $(INST_PERL_LIB)
50 :    
51 :     htaccess_src = $(RTROOT)/config/all.htaccess
52 :     htaccess_dst = $(cgidir)/.htaccess
53 :    
54 :     copy_htaccess: force
55 :     if test -f $(htaccess_src); then \
56 :     cp $(htaccess_src) $(htaccess_dst) ; \
57 :     fi
58 :    
59 :     force:
60 :    
61 :     schematools:
62 :     stDeclFiles:
63 :     stGeneratedFiles:
64 :    
65 :    
66 :     test:
67 :    
68 :     clean:
69 :    
70 :     $(cgidir)/%: $(TOPDIR)/$(PKGNAME)/% $(TOOL_HDR)
71 :     ( cat $(TOOL_HDR) $< > $@; chmod +x $@ )
72 :    
73 :     #
74 :     # We have a config problem at the moment. I do not want to depend
75 :     # upon explicit calls to other packages, as done here nor do I want
76 :     # to assume that package was built first. For now, we live with this.
77 :    
78 :     #$(TOOL_HDR):
79 :     # cd $(workdir); $(TOPDIR)/FigCommon/configure-env $(RTARCH) $(TOPDIR)
80 :    
81 :    
82 :     #
83 :     # Since our lib files have directories, need to create the target
84 :     # directory if it doesn't yet exist.
85 :     #
86 :     $(libdir)/$(PKGNAME)/%.pm: $(TOPDIR)/$(PKGNAME)/%.pm
87 :     tgt_dir=`dirname $@`; \
88 :     if [ ! -d $$tgt_dir ] ; then \
89 :     mkdir $$tgt_dir; \
90 :     fi
91 :     cp -p $< $@
92 :    
93 : olson 1.2 $(bindir)/%: $(TOPDIR)/$(PKGNAME)/%.pl $(TOOL_HDR)
94 :     ( cat $(TOOL_HDR) $< > $@; chmod +x $@ )
95 :    

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