[Bio] / FigWebServices / local_sim_compute.cgi Repository:
ViewVC logotype

View of /FigWebServices/local_sim_compute.cgi

Parent Directory Parent Directory | Revision Log Revision Log


Revision 1.3 - (download) (annotate)
Wed Jan 25 18:58:37 2006 UTC (14 years ago) by olson
Branch: MAIN
CVS Tags: mgrast_dev_08112011, rast_rel_2009_05_18, mgrast_dev_08022011, rast_rel_2014_0912, rast_rel_2008_06_18, myrast_rel40, rast_rel_2008_06_16, mgrast_dev_05262011, rast_rel_2008_12_18, mgrast_dev_04082011, rast_rel_2008_07_21, rast_rel_2010_0928, rast_2008_0924, mgrast_version_3_2, mgrast_dev_12152011, rast_rel_2008_04_23, mgrast_dev_06072011, rast_rel_2008_09_30, rast_rel_2009_0925, rast_rel_2010_0526, rast_rel_2014_0729, mgrast_dev_02212011, rast_rel_2010_1206, caBIG-05Apr06-00, mgrast_release_3_0, mgrast_dev_03252011, rast_rel_2010_0118, mgrast_rel_2008_0924, mgrast_rel_2008_1110_v2, rast_rel_2009_02_05, rast_rel_2011_0119, mgrast_rel_2008_0625, mgrast_release_3_0_4, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_1, mgrast_dev_03312011, mgrast_release_3_1_2, mgrast_release_3_1_1, mgrast_release_3_1_0, mgrast_dev_04132011, rast_rel_2008_10_09, mgrast_dev_04012011, rast_release_2008_09_29, mgrast_rel_2008_0806, mgrast_rel_2008_0923, mgrast_rel_2008_0919, rast_rel_2009_07_09, rast_rel_2010_0827, mgrast_rel_2008_1110, myrast_33, rast_rel_2011_0928, rast_rel_2008_09_29, mgrast_rel_2008_0917, rast_rel_2008_10_29, mgrast_dev_04052011, mgrast_dev_02222011, caBIG-13Feb06-00, rast_rel_2009_03_26, mgrast_dev_10262011, rast_rel_2008_11_24, rast_rel_2008_08_07, HEAD
Changes since 1.2: +33 -0 lines
more fixes to sim compute stuff.

#
# CGI that display the status of any local sim computations, including information about the 
# queue of pegs awaiting computation, queued computations, and any running computations.
#
# It might also include information about the current size of the set of dynamic sims.
#

use FIG;
use FIG_Config;
use FIG_CGI;
use HTML;

my $html = [];

my $sim_q = "$FIG_Config::global/queued_similarities";

my($fig, $cgi, $user) = FIG_CGI::init(debug_save => 0,
				      debug_load => 0,
				      print_params => 0);

push @$html,
    $cgi->title("Similarity queue manager"),
    $cgi->h1("Similarity queue manager"),
    ;


#
# Actions.
#

if ($cgi->param('start'))
{
    start_computation();
}


#
# Gather information.
#

push @$html, $cgi->start_form(-name => 'control_form');


my $sim_q_size = -s $sim_q;
my $sim_q_count;

if ($sim_q_size and $sim_q_size < 100000)
{
    $sim_q_count = 0;
    open(S, "<$sim_q");
    while (<S>)
    {
	$sim_queue_count++;
    }
    close(S);
}

push @$html, "Similarity queue: $sim_q_size bytes ";
push @$html, "$sim_queue_count pegs" if $sim_queue_count;
push @$html, $cgi->p, "\n";

my $db = $fig->db_handle();

if ($db->table_exists("sim_queue"))
{
    my $res = $db->SQL("select qid, finished, count(chunk_id), sum(len) from sim_queue group by qid, finished order by qid, finished");

    if (@$res > 0)
    {
	push @$html, HTML::make_table(["Queue ID", "Is finished", "Number of chunks", "Size in bytes"],
				      $res);
    }
}

#
# Controls.
#

if ($sim_q_size)
{
    push @$html, $cgi->submit(-value => "Start sim computation",
			      -name => "start");
}

HTML::show_page($cgi, $html);

#
# Start up the queued sims. This means creating a sim askfor pool.
#
sub start_computation
{
    my $pool_id = $fig->create_sim_askfor_pool();

    push(@$html, "Created new sim pool $pool_id<p>\n");
}

MCS Webmaster
ViewVC Help
Powered by ViewVC 1.0.3