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revision 1.4, Wed Feb 9 21:35:13 2005 UTC revision 1.9, Mon Dec 5 19:12:12 2005 UTC
# Line 1  Line 1 
1    #
2    # Copyright (c) 2003-2006 University of Chicago and Fellowship
3    # for Interpretations of Genomes. All Rights Reserved.
4    #
5    # This file is part of the SEED Toolkit.
6    #
7    # The SEED Toolkit is free software. You can redistribute
8    # it and/or modify it under the terms of the SEED Toolkit
9    # Public License.
10    #
11    # You should have received a copy of the SEED Toolkit Public License
12    # along with this program; if not write to the University of Chicago
13    # at info@ci.uchicago.edu or the Fellowship for Interpretation of
14    # Genomes at veronika@thefig.info or download a copy from
15    # http://www.theseed.org/LICENSE.TXT.
16    #
17    
18  use Frontier::RPC2;  use Frontier::RPC2;
19    
20  use FIG;  use FIG;
# Line 158  Line 175 
175      'all_subsystems'   => $wrapper->wrap_array_return("all_subsystems"),      'all_subsystems'   => $wrapper->wrap_array_return("all_subsystems"),
176      'assign_function' => $wrapper->wrap_scalar_return("assign_function"),      'assign_function' => $wrapper->wrap_scalar_return("assign_function"),
177      'assign_functionF' => $wrapper->wrap_scalar_return("assign_functionF"),      'assign_functionF' => $wrapper->wrap_scalar_return("assign_functionF"),
178        'assigned_pegs'   => $wrapper->wrap_array_return("assigned_pegs"),
179        'assigned_pegs_in_ss' => $wrapper->wrap_array_return("assigned_pegs_in_ss"),
180        'assigned_pegs_not_in_ss'   => $wrapper->wrap_array_return("assigned_pegs_not_in_ss"),
181      'assignments_made'   => $wrapper->wrap_array_return("assignments_made"),      'assignments_made'   => $wrapper->wrap_array_return("assignments_made"),
182      'auto_assign' => $wrapper->wrap_scalar_return("auto_assign"),      'auto_assign' => $wrapper->wrap_scalar_return("auto_assign"),
183      'auto_assignF' => $wrapper->wrap_scalar_return("auto_assignF"),      'auto_assignF' => $wrapper->wrap_scalar_return("auto_assignF"),
# Line 248  Line 268 
268      'sort_fids_by_taxonomy'   => $wrapper->wrap_array_return("sort_fids_by_taxonomy"),      'sort_fids_by_taxonomy'   => $wrapper->wrap_array_return("sort_fids_by_taxonomy"),
269      'sort_genomes_by_taxonomy'   => $wrapper->wrap_array_return("sort_genomes_by_taxonomy"),      'sort_genomes_by_taxonomy'   => $wrapper->wrap_array_return("sort_genomes_by_taxonomy"),
270      'subsystem_info' => $wrapper->wrap_array_return("subsystem_info"),      'subsystem_info' => $wrapper->wrap_array_return("subsystem_info"),
271        'subsystem_to_roles' => $wrapper->wrap_array_return("subsystem_to_roles"),
272      'subsystems_for_peg' => $wrapper->wrap_array_return("subsystems_for_peg"),      'subsystems_for_peg' => $wrapper->wrap_array_return("subsystems_for_peg"),
273      'sz_family'   => $wrapper->wrap_scalar_return("sz_family"),      'sz_family'   => $wrapper->wrap_scalar_return("sz_family"),
274      'taxonomic_groups_of_complete'   => $wrapper->wrap_array_return("taxonomic_groups_of_complete"),      'taxonomic_groups_of_complete'   => $wrapper->wrap_array_return("taxonomic_groups_of_complete"),

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