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Revision 1.23 - (view) (download) (annotate) - [select for diffs]
Fri Apr 16 21:37:09 2010 UTC (9 years, 11 months ago) by olson
Branch: MAIN
CVS Tags: HEAD, mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, myrast_rel40, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119, rast_rel_2011_0928, rast_rel_2014_0729, rast_rel_2014_0912
Changes since 1.22: +1 -1 lines
Diff to previous 1.22
Push down default max requests.

Revision 1.22 - (view) (download) (annotate) - [select for diffs]
Thu Dec 10 19:58:21 2009 UTC (10 years, 3 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2010_0118
Changes since 1.21: +2 -2 lines
Diff to previous 1.21
Use back-compat Kmers code

Revision 1.21 - (view) (download) (annotate) - [select for diffs]
Thu Oct 29 18:30:56 2009 UTC (10 years, 5 months ago) by parrello
Branch: MAIN
Changes since 1.20: +14 -0 lines
Diff to previous 1.20
Final server updates.

Revision 1.20 - (view) (download) (annotate) - [select for diffs]
Fri Aug 21 21:30:22 2009 UTC (10 years, 7 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2009_0925
Changes since 1.19: +29 -10 lines
Diff to previous 1.19
Use new set-based interface for computing protein assignments with kmers.pm.

Revision 1.19 - (view) (download) (annotate) - [select for diffs]
Mon Jul 20 21:49:27 2009 UTC (10 years, 8 months ago) by olson
Branch: MAIN
Changes since 1.18: +101 -0 lines
Diff to previous 1.18
add find_rnas

Revision 1.18 - (view) (download) (annotate) - [select for diffs]
Wed Jul 1 21:29:51 2009 UTC (10 years, 9 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2009_07_09
Changes since 1.17: +1 -1 lines
Diff to previous 1.17
fix reurn type

Revision 1.17 - (view) (download) (annotate) - [select for diffs]
Wed Jul 1 21:26:12 2009 UTC (10 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.16: +1 -1 lines
Diff to previous 1.16
fix reurn type

Revision 1.16 - (view) (download) (annotate) - [select for diffs]
Wed Jul 1 21:24:41 2009 UTC (10 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.15: +6 -1 lines
Diff to previous 1.15
change call_genes otput format back to yaml and include tbl infomration

Revision 1.15 - (view) (download) (annotate) - [select for diffs]
Wed Jul 1 18:14:27 2009 UTC (10 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.14: +11 -1 lines
Diff to previous 1.14
chagne output generation, make locations shwo up as comments

Revision 1.14 - (view) (download) (annotate) - [select for diffs]
Wed Jul 1 17:43:07 2009 UTC (10 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.13: +65 -0 lines
Diff to previous 1.13
add call_genes

Revision 1.13 - (view) (download) (annotate) - [select for diffs]
Wed Jul 1 17:42:40 2009 UTC (10 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.12: +14 -3 lines
Diff to previous 1.12
Misc fixes

Revision 1.12 - (view) (download) (annotate) - [select for diffs]
Mon Jun 29 16:33:40 2009 UTC (10 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.11: +11 -0 lines
Diff to previous 1.11
some protocol changes.

Revision 1.11 - (view) (download) (annotate) - [select for diffs]
Tue Jun 23 20:30:56 2009 UTC (10 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.10: +28 -183 lines
Diff to previous 1.10
fixes from running figfam server

Revision 1.10 - (view) (download) (annotate) - [select for diffs]
Tue Jun 16 16:04:30 2009 UTC (10 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.9: +6 -2 lines
Diff to previous 1.9
add max-requests support

Revision 1.9 - (view) (download) (annotate) - [select for diffs]
Thu May 21 21:31:56 2009 UTC (10 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.8: +11 -12 lines
Diff to previous 1.8
more api changes

Revision 1.8 - (view) (download) (annotate) - [select for diffs]
Wed May 13 20:42:01 2009 UTC (10 years, 10 months ago) by arodri7
Branch: MAIN
CVS Tags: rast_rel_2009_05_18
Changes since 1.7: +59 -0 lines
Diff to previous 1.7
added FIGfam functions org_of, function_of, seq_of, aliases_of, and more

Revision 1.7 - (view) (download) (annotate) - [select for diffs]
Tue May 12 20:37:17 2009 UTC (10 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.6: +46 -4 lines
Diff to previous 1.6
Support for running figfam_server_2 out of regular CGI again

Revision 1.6 - (view) (download) (annotate) - [select for diffs]
Tue May 12 20:17:55 2009 UTC (10 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.5: +9 -0 lines
Diff to previous 1.5
add families_containing_peg

Revision 1.5 - (view) (download) (annotate) - [select for diffs]
Mon May 11 20:55:05 2009 UTC (10 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.4: +3 -1 lines
Diff to previous 1.4
Parameterize assign_functions_to_DNA to add $min_hits (default to 3) and $max_gap (default to 600) arguments.

Revision 1.4 - (view) (download) (annotate) - [select for diffs]
Mon May 11 20:17:11 2009 UTC (10 years, 10 months ago) by disz
Branch: MAIN
Changes since 1.3: +2 -2 lines
Diff to previous 1.3
cgi header fixup

Revision 1.3 - (view) (download) (annotate) - [select for diffs]
Mon May 11 20:13:00 2009 UTC (10 years, 10 months ago) by olson
Branch: MAIN
Changes since 1.2: +9 -1 lines
Diff to previous 1.2
local changes

Revision 1.2 - (view) (download) (annotate) - [select for diffs]
Fri May 8 17:08:14 2009 UTC (10 years, 11 months ago) by olson
Branch: MAIN
Changes since 1.1: +24 -13 lines
Diff to previous 1.1
final? changes to the Figfam server code

Revision 1.1 - (view) (download) (annotate) - [select for diffs]
Thu May 7 22:07:32 2009 UTC (10 years, 11 months ago) by olson
Branch: MAIN
fastcgi-based figfam server, with some YAML output added

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