[Bio] / FigWebServices / fabric.cgi Repository:
ViewVC logotype

View of /FigWebServices/fabric.cgi

Parent Directory Parent Directory | Revision Log Revision Log


Revision 1.1 - (download) (annotate)
Sat Sep 19 16:02:00 2009 UTC (10 years, 1 month ago) by overbeek
Branch: MAIN
CVS Tags: mgrast_dev_08112011, mgrast_dev_08022011, rast_rel_2014_0912, myrast_rel40, mgrast_dev_05262011, mgrast_dev_04082011, rast_rel_2010_0928, mgrast_version_3_2, mgrast_dev_12152011, mgrast_dev_06072011, rast_rel_2009_0925, rast_rel_2010_0526, rast_rel_2014_0729, mgrast_dev_02212011, rast_rel_2010_1206, mgrast_release_3_0, mgrast_dev_03252011, rast_rel_2010_0118, rast_rel_2011_0119, mgrast_release_3_0_4, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_1, mgrast_dev_03312011, mgrast_release_3_1_2, mgrast_release_3_1_1, mgrast_release_3_1_0, mgrast_dev_04132011, mgrast_dev_04012011, rast_rel_2010_0827, myrast_33, rast_rel_2011_0928, mgrast_dev_04052011, mgrast_dev_02222011, mgrast_dev_10262011, HEAD
explore differences in functional fabric

########################################################################
# -*- perl -*-
#
# Copyright (c) 2003-2006 University of Chicago and Fellowship
# for Interpretations of Genomes. All Rights Reserved.
#
# This file is part of the SEED Toolkit.
# 
# The SEED Toolkit is free software. You can redistribute
# it and/or modify it under the terms of the SEED Toolkit
# Public License. 
#
# You should have received a copy of the SEED Toolkit Public License
# along with this program; if not write to the University of Chicago
# at info@ci.uchicago.edu or the Fellowship for Interpretation of
# Genomes at veronika@thefig.info or download a copy from
# http://www.theseed.org/LICENSE.TXT.
#

use URI::Escape;  # uri_escape
use FIG;
my $fig = new FIG;

use HTML;
use strict;

use CGI;
my $cgi = new CGI;

if (0)
{
    my $VAR1;
    eval(join("",`cat /tmp/fabric`));
    $cgi = $VAR1;
#   print STDERR &Dumper($cgi);
}

if (0)
{
    print $cgi->header;
    my @params = $cgi->param;
    print "<pre>\n";
    foreach $_ (@params)
    {
	print "$_\t:",join(",",$cgi->param($_)),":\n";
    }

    if (0)
    {
	if (open(TMP,">/tmp/fabric"))
	{
	    print TMP &Dumper($cgi);
	    close(TMP);
	}
    }
    exit;
}
my $html = [];

my $tax1    = $cgi->param('tax1');
my $tax2    = $cgi->param('tax2');

if ($tax1 && $tax2)
{
    &show_diffs($fig,$cgi,$html,$tax1,$tax2);
}
else
{
    &initial_page($fig,$cgi,$html);
}

&HTML::show_page($cgi,$html);
exit;

sub show_diffs {
    my($fig,$cgi,$html,$tax1,$tax2) = @_;

    my $to_role = &load_roles;
    my $to_subsys = &load_role_to_subsys;
    
    $/ = "\n//\n";
    my($v1,$v2);
    $/ = "\n//\n";
    while (defined($_ = <DATA>))
    {
	chomp;
	if ($_ =~ /^(\S[^\n]*\S)\n([^\n]*)/s)
	{
	    my $tax = $1;
	    if (($tax eq $tax1) || ($tax eq $tax2))
	    {
		my $vec = &unit_vector([split(/\t/,$2)]);
		if ($tax eq $tax1)
		{
		    $v1 = $vec;
		}
		else
		{
		    $v2 = $vec;
		}
	    }
	}
    }
    $/ = "\n";

    my @coords1 = ();
    my @coords2 = ();
    my $i;
    my $tot1 = 0;
    my $tot2 = 0;
    for ($i=0; ($i < @$v1); $i++)
    {
	my $diff = abs($v1->[$i] - $v2->[$i]);
	if ($diff > 0.001)
	{
	    if ($v1->[$i] > $v2->[$i])
	    {
		push(@coords1,[$i,$diff]);
	    }
	    else
	    {
		push(@coords2,[$i,$diff]);
	    }
	}
	$tot1 += $v1->[$i];
	$tot2 += $v2->[$i];
    }
    @coords1 = sort { $b->[1] <=> $a->[1] } @coords1;
    @coords2 = sort { $b->[1] <=> $a->[1] } @coords2;
    my @tab1 = &build_tab($tax1,$tax2,$v1,$v2,$tot1,$tot2,$fig,\@coords1,$to_role,$to_subsys);
    push(@$html,@tab1);
    my @tab2 = &build_tab($tax2,$tax1,$v2,$v1,$tot2,$tot1,$fig,\@coords2,$to_role,$to_subsys);
    push(@$html,@tab2);
}

sub build_tab {
    my($taxA,$taxB,$vA,$vB,$totA,$totB,$fig,$coords,$to_role,$to_subsys) = @_;

    my $col_hdrs = [$taxA,$taxB,'Role','Subsystems'];
    my $tab = [];
    foreach my $tuple (@$coords)
    {
	my($role_num,$diff) = @$tuple;
	my $xA = sprintf("%0.6f",$vA->[$role_num]/$totA);
	my $xB = sprintf("%0.6f",$vB->[$role_num]/$totB);
	my $role = $to_role->[$role_num];
	my $subsys = join("<br>",map { &link_to_subsys($_) } @{$to_subsys->{$role}});
	push(@$tab,[$xA,$xB,$role,$subsys]);
    }
    return &HTML::make_table($col_hdrs,$tab,"Extra Functionality in $taxA");
}

sub link_to_subsys {
    my($subsys) = @_;

    my $subsysQ = uri_escape($subsys);
    my $link = "<a href=http://anno-3.nmpdr.org/anno/FIG/SubsysEditor.cgi?page=ShowSpreadsheet&subsystem=$subsysQ>$subsys</a>";
    return $link;
}

sub load_roles {

    my $to_role = [];
    my $i = 0;
    while (defined($_ = <DATA>) && ($_ ne "//\n"))
    {
	if ($_ =~ /^(\S.*\S)/)
	{
	    $to_role->[$i] = $1;
	}
	$i++;
    }
    return $to_role;
}

sub load_role_to_subsys {

    my $to_subsys = {};
    while (defined($_ = <DATA>) && ($_ ne "//\n"))
    {
	chomp;
	my @subs = split(/\t/,$_);
	my $role = shift @subs;
	$to_subsys->{$role} = [@subs];
    }
    return $to_subsys;
}

sub unit_vector {
    my($v) = @_;

    my $tot = 0;
    my $uv  = [];
    my $i;
    for ($i = 0; ($i < @$v); $i++)
    {
        my $x = $v->[$i];
        if (defined($x))
        {
            $tot += $x * $x;
        }
    }
    my $nf = sqrt($tot);

    for ($i = 0; ($i < @$v); $i++)
    {
        my $x = $v->[$i];
        $x    = $x ? $x : 0;
        push(@$uv,$nf ? ($x / $nf) : 0);
    }
    return wantarray ? @$uv : $uv;
}

sub initial_page {
    my($fig,$cgi,$html) = @_;

    $/ = "\n//\n";
    my @tax = map { $_ =~ /^(\S[^\n]*\S)/; $1 } <DATA>;
    shift @tax; shift @tax;
    my @tax = sort @tax;
    $/ = "\n";

    push @$html, $cgi->start_form(-method => 'POST', -action => "fabric.cgi");
    push(@$html,$cgi->h1("Exploring the Fabric"),"<br><br>",
	 "Pick Taxonomic Groups to be Compared:<br>",
	 $cgi->scrolling_list( -name => 'tax1',
			       -values => \@tax,
			       -size => 20),
	 $cgi->scrolling_list( -name => 'tax2',
			       -values => \@tax,
			       -size => 20),
	 "<br><br>",
	 $cgi->submit('Show Differences in Fabric'));
    push @$html, $cgi->end_form;
}    
__DATA__
10 kDa culture filtrate antigen CFP-10 (EsxB)
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
1,2-dihydroxybenzyl pyruvate aldolase
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)
1,2-dihydroxynaphthalene dioxygenase
12-oxophytodienoate reductase (OPR3)(DDE1)
1,4-alpha-glucan branching enzyme (EC 2.4.1.18)
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
1,4-alpha-glucan phosphorylase (EC 2.4.1.1)
1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.-)
14 kDa peptide of ubiquinol-cytochrome C2 oxidoreductase complex
15,16-dihydrobiliverdin:ferredoxin oxidoreductase PebA (EC 1.3.7.2)
16S rRNA m(5)C 967 methyltransferase (EC 2.1.1.-)
16S rRNA processing protein RimM
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)
1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.4.3)
1-phosphofructokinase (EC 2.7.1.56)
1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22)
21 kDa hemolysin precursor
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal type (EC 5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)
2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)
2,3-butanediol dehydrogenase, S-alcohol forming, (S)-acetoin-specific (EC 1.1.1.76)
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)
2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase(CmtB) (EC 1.1.1.100)
2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase (EC 1.3.1.-)
2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)
2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58), pyochelin biosynthesis protein PchD
2,3-dihydroxybiphenyl 1,2-dioxygenase
2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC)
2,3-dihydroxyphenylpropionate 1,2-dioxygenase (EC 1.13.11.-)
2,3-diketo-5-methylthiopentyl-1-phosphate enolase
2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase (EC 3.1.3.77)
2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor
2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN
2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM
2,4-diaminopentanoate dehydrogenase (EC 1.4.1.12)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-)
2,4-diketo-3-deoxy-L-fuconate hydrolase
2,5-diketo-D-gluconate reductase A (EC 1.1.1.274)
2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274)
2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)
2-(acetamidomethylene)succinate hydrolase (EC 3.5.1.29)
2-Amino-2-deoxy-isochorismate hydrolase (EC 3.-.-.-)
2-Amino-2-deoxy-isochorismate synthase (EC 4.1.3.-)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC 2.5.1.-)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45)
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)
2-amino-4-ketopentanoate thiolase, alpha subunit
2-amino-4-ketopentanoate thiolase, beta subunit
2'-aminobiphenyl-2,3-diol 1,2-dioxygenase
2-aminoethylphosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)
2-aminoethylphosphonate ABC transporter periplasmic binding component (TC 3.A.1.9.1)
2-aminoethylphosphonate ABC transporter permease protein II (TC 3.A.1.9.1)
2-aminoethylphosphonate ABC transporter permease protein I (TC 3.A.1.9.1)
2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
2-aminoethylphosphonate uptake and metabolism regulator
2-aminomuconate deaminase (EC 3.5.99.5)
2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32)
2-chlorobenzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.13)
2-chlorobenzoate 1,2-dioxygenase beta subunit (EC 1.14.12.13)
2-chlorobenzoate 1,2-dioxygenase (EC 1.14.12.13)
2-chlorobenzoate 1,2-dioxygenase reductase component
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)
2-cys peroxiredoxin BAS1, chloroplast precursor
2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
2-dehydro-3-deoxygluconate aldolase (EC 4.1.2-)
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
2-dehydropantoate 2-reductase (EC 1.1.1.169)
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase BchC
2-haloalkanoic acid dehalogenase (EC 3.8.1.2)
2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.-)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (EC 3.7.1.-)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
2-hydroxychromene-2-carboxylate isomerase
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9)
2-hydroxypent-2,4-dienoate hydratase (EC 4.2.-.-)
2-hydroxypenta-2,4-dienoate hydratase (CmtF) (EC 4.2.1.-)
2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase alpha subunit (EC 1.1.1.35)
2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase beta subunit (EC 1.1.1.35)
2-hydroxyphytanoyl-CoA lyase-related protein [EC:4.1.-.-]
2-isopropylmalate synthase (EC 2.3.3.13)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II PhzC (EC 2.5.1.54)
2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)
2-keto-3-deoxygluconate permease (KDG permease)
2-keto-3-deoxy-L-fuconate dehydrogenase
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
2-keto-4-pentenoate hydratase (EC 4.2.1.-)
2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-)
2-ketobutyrate formate-lyase (EC 2.3.1.-)
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, cytochrome c
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, flavoprotein
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, gamma subunit
2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)
2-ketogluconate kinase (EC 2.7.1.13)
2-ketogluconate transporter
2-ketogluconate utilization repressor PtxS
2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase (EC 1.14.12.4)
2-methyl-6-phytyl-1,4-benzoquinone cyclase
2-methyl-6-phytyl-1,4-benzoquinone methyltransferase
2-methyl-6-solanyl-1,4-benzoquinone methyltransferase
2-methylaconitate racemase
2-Methylcitrate dehydratase AcnD
2-methylcitrate dehydratase (EC 4.2.1.79)
2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
2-methylcitrate synthase (EC 2.3.3.5)
2-methylisocitrate dehydratase (EC 4.2.1.99)
2-nitropropane dioxygenase (EC 1.13.11.32)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)
2-octaprenyl-6-methoxyphenol hydroxylase (EC 1.14.13.-)
2'-O-glycosyltransferase CruG
2-Oxobutyrate dehydrogenase E1 (EC:1.2.4.1)
2-Oxobutyrate oxidase, putative
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
2-oxoglutarate/malate translocator
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3)
2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
2-vinyl bacteriochlorophyllide hydratase BchF (EC 4.2.1.-)
3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)
3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-)
33 kDa chaperonin (Heat shock protein 33) (HSP33)
3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase (EC 2.1.1.114)
3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15)
3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)
3,5-diaminobexanoate dehydrogenase (EC 1.4.1.11)
3,7-dideoxy-D-threo-hepto-2, 6-diulosonate synthase (EC 4.2.3.-)
3-aminobutyrl-CoA ammonia lyase (EC 4.3.1.14)
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
3-dehydro-L-gulonate 2-dehydrogenase (EC 1.1.1.130)
3-dehydroquinate dehydratase I (EC 4.2.1.10)
3-dehydroquinate dehydratase II (EC 4.2.1.10)
3-dehydroquinate synthase (EC 4.2.3.4)
3-dehydroshikimate dehydratase
3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)
3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-)
3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)
3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)
3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase (EC 4.1.1.51)
3-hydroxy-3isohexenylglutaryl-CoA:acetate lyase
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase PaaC (EC 1.1.1.-)
3-hydroxyacyl-CoA dehydrogenase (PaaH) (EC 1.1.1.157)
3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6)
3-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, alternative (EC 4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60), inferred for ABFAE pathway
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
3-hydroxyphenylpropionic acid transporter
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
3-isopropylmalate dehydrogenase (EC 1.1.1.85)
3-keto-5-aminohexanoate cleavage enzyme
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
3-keto-L-gulonate 6-phosphate decarboxylase
3-keto-L-gulonate 6-phosphate decarboxylase homolog
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), inferred for ABFAE pathway
3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) in cluster with unspecified monosaccharide transporter
3-oxoacyl-(acyl-carrier-protein) synthase
3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41), FabV inferred for ABFAE pathway
3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41), inferred for ABFAE pathway
3-oxoacyl-[acyl-carrier-protein] synthase, KASI, alternative (EC 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)
3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
3-Oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6)
3-Oxoadipate CoA-transferase subunit B (EC 2.8.3.6)
3-Oxoadipate enol-lactonase (EC 3.1.1.24)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
3-phenylpropionate dioxygenase, alpha subunit (EC 1.14.12.19)
3-phenylpropionate dioxygenase, beta subunit (EC 1.14.12.19)
3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component (EC 1.18.1.3)
3-phenylpropionate dioxygenase ferredoxin subunit
3'-phosphoadenosine 5'-phosphosulfate sulfurtransferase DndC
3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-)
3'-to-5' exoribonuclease RNase R
4,4'-diapolycopene oxidase
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
4-amino, 4-deoxychorismate mutase (EC 5.4.99.-)
4-amino-4-deoxychorismate synthase, amidotransferase component , aminase component (EC 2.6.1.-)
4-amino, 4-deoxyprephenate dehydrogenase (EC 1.3.1.-)
4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19)
4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
4-coumarate--CoA ligase 1 (EC 6.2.1.12)
4-cresol dehydrogenase [hydroxylating] cytochrome c subunit precursor
4-cresol dehydrogenase [hydroxylating] flavoprotein subunit (EC 1.17.99.1)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)
4Fe-4S ferredoxin, iron-sulfur binding
4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16)
4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
4-hydroxybenzoate transporter
4-hydroxybenzoyl-CoA reductase, beta subunit (EC 1.3.99.20)
4-hydroxybenzoyl-CoA reductase, gamma subunit (EC 1.3.99.20)
4-hydroxybenzoyl-CoA thioesterase domain protein
4-hydroxybenzoyl-CoA thioesterase family active site
4-hydroxycinnamoyl CoA hydratase/lyase (Enoyl-CoA hydratase/lyase) (EC 4.2.1.17)
4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)
4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-)
4-hydroxyphenylacetate symporter, major facilitator superfamily (MFS)
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
4-hydroxyproline epimerase (EC 5.1.1.8)
4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)
4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase
4-oxalocrotonate decarboxylase (EC 4.1.1.77)
4-oxalocrotonate tautomerase (EC 5.3.2.-)
4'-phosphopantetheinyl transferase (EC 2.7.8.-)
4'-phosphopantetheinyl transferase (EC 2.7.8.-) in polymyxin biosynthetic cluster
4'-phosphopantetheinyl transferase entD (EC 2.7.8.-)
4-pyridoxic acid dehydrogenase
4-pyridoxolactonase (EC 3.1.1.27)
50S ribosomal protein acetyltransferase
50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
5,10-Methylenetetrahydrofolate reductase (EC 1.7.99.5)
5,6-dimethylbenzimidazole synthase, flavin destructase family
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
5-aminolevulinate synthase (EC 2.3.1.37)
5-aminopentanamidase (EC 3.5.1.30)
5-aminovalerate aminotransferase (EC 2.6.1.48)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60)
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68)
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase
5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
5-deoxy-glucuronate isomerase (EC 5.3.1.-)
5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
5-FCL-like protein
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase [form 2] (EC 4.1.2.29)
5-keto-2-deoxygluconokinase (EC 2.7.1.92)
5-keto-D-gluconate 5-reductase (EC 1.1.1.69)
5-methyl-dCTP pyrophosphohydrolase (EC 3.6.1.-)
5-methyltetrahydrofolate corrinoid iron sulfur protein methyltransferase
5-methyltetrahydrofolate:corrinoid iron-sulfur protein methyltransferase
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
5'-methylthioadenosine nucleosidase (EC 3.2.2.16)
5'-methylthioadenosine phosphorylase (EC 2.4.2.28)
5-methylthioribose kinase (EC 2.7.1.100)
5'-nucleotidase (EC 3.1.3.5)
5'-nucleotidase surE (EC 3.1.3.5)
5'-nucleotidase YjjG (EC 3.1.3.5)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase.
5-oxoprolinase (EC 3.5.2.9)
5S rRNA
5-tetrahydromethanopterin:corrinoid iron-sulfur protein methyltransferase
60S ribosome subunit biogenesis protein NIP7
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
6-deoxychalcone synthase
6 kDa early secretory antigenic target ESAT-6 (EsxA)
6-phospho-3-hexuloisomerase
6-phospho-beta-galactosidase (EC 3.2.1.85)
6-phospho-beta-glucosidase ascB (EC 3.2.1.86)
6-phospho-beta-glucosidase (EC 3.2.1.86)
6-phosphofructokinase class II (EC 2.7.1.11)
6-phosphofructokinase (EC 2.7.1.11)
6-phosphofructokinase, eukaryotic type (EC 2.7.1.11)
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
6-phosphogluconolactonase (EC 3.1.1.31)
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12)
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2
8-amino-7-oxononanoate synthase (EC 2.3.1.47)
8-amino-7-oxononanoate synthase (EC 2.3.1.47) / CqsA
AA3-600 quinol oxidase subunit I
AA3-600 quinol oxidase subunit II
AA3-600 quinol oxidase subunit IIII
AA3-600 quinol oxidase subunit IV
AAA family ATPase, ESX-1 secretion system component Rv3868
ABC alpha-glucoside transporter, inner membrane subunit AglF
ABC efflux pump, fused inner membrane and ATPase subunits in pyochelin gene cluster
ABC transporter ATP-binding protein SkfF
ABC transporter ATP-binding protein USSDB6B
ABC transporter ATP-binding protein uup
ABC transporter, ATP-binding protein Vex2
ABC transporter ATP-binding protein YvcR
ABC transporter in pyoverdin gene cluster, ATP-binding component
ABC transporter in pyoverdin gene cluster, periplasmic component
ABC transporter in pyoverdin gene cluster, permease component
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ABC transporter membrane-spanning permease, Pep export, Vex1
ABC transporter membrane-spanning permease, Pep export, Vex3
ABC transporter multidrug efflux pump, fused ATP-binding domains
ABC transporter, periplasmic spermidine putrescine-binding protein potD (TC_3.A.1.11.1)
ABC transporter, permease protein YbbP clustered with maltose/maltodextrin transporter
ABC transporter permease protein YvcS
ABC transporter, predicted N-acetylneuraminate-binding protein
ABC transporter, predicted N-acetylneuraminate transport system permease protein 1
ABC transporter, predicted N-acetylneuraminate transport system permease protein 2
ABC transporter protein IroC
ABC transporter SkfE
ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing
ABC transport system, permease component YbhR
ABC transport system, permease component YbhS
ABC-type Fe3+ transport system protein
ABC-type hemin transport system, ATPase component
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
ABC-type polar amino acid transport system, ATPase component
ABC-type probable sulfate transporter, ATPase component
ABC-type probable sulfate transporter, periplasmic binding protein
ABC-type probable sulfate transporter, permease protein
ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE
ABC-type siderophore export system, fused ATPase and permease components
ABC-type sugar transport system, periplasmic binding protein YcjN
ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C
ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A
ABC-type tungstate transport system, ATP-binding protein
ABC-type tungstate transport system, periplasmic binding protein
ABC-type tungstate transport system, permease protein
ABC-type vanadate transport system, ATP-binding protein
ABC-type vanadate transport system, periplasmic binding protein
ABC-type vanadate transport system, permease protein
Accessory cholera enterotoxin
Accessory colonization factor AcfA
Accessory colonization factor AcfB
Accessory colonization factor AcfC
Accessory colonization factor AcfD precursor
Accessory secretory protein Asp1
Accessory secretory protein Asp2
Accessory secretory protein Asp3
Accumulation-associated protein AAP
Acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10)
Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol
Acetaldehyde dehydrogenase (EC 1.2.1.10)
Acetaldehyde dehydrogenase, ethanolamine utilization cluster
Acetate kinase (EC 2.7.2.1)
Acetate permease ActP (cation/acetate symporter)
Acetate permease ActP (cation/acetate symporter) PaaL
Acetoacetate metabolism regulatory protein AtoC
Acetoacetyl-CoA reductase (EC 1.1.1.36)
Acetoacetyl-CoA synthetase (EC 6.2.1.16)
Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16)
Acetoin catabolism protein X
Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)
Acetoin (diacetyl) reductase (EC 1.1.1.5)
Acetolactate synthase, catabolic (EC 2.2.1.6)
Acetolactate synthase large subunit (EC 2.2.1.6)
Acetolactate synthase small subunit (EC 2.2.1.6)
Acetolactate synthase small subunit (EC 2.2.1.6), predicted
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type 2
Acetolactate synthase small subunit (EC 2.2.1.6), Xanthomonadales type
Acetone carboxylase, alpha subunit (EC 6.4.1.6)
Acetone carboxylase, beta subunit (EC 6.4.1.6)
Acetone carboxylase, gamma subunit (EC 6.4.1.6)
Acetophenone carboxylase subunit Apc1
Acetophenone carboxylase subunit Apc2
Acetophenone carboxylase subunit Apc3
Acetophenone carboxylase subunit Apc4
Acetophenone carboxylase subunit Apc5
Acetylaminoadipate kinase (EC 2.7.2.-)
Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8)
Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8)
Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD
Acetyl-CoA synthase
Acetyl-CoA synthase corrinoid iron-sulfur protein, large subunit
Acetyl-CoA synthase corrinoid iron-sulfur protein, small subunit
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative
Acetyl-CoA synthetase (ADP-forming) alpha chain (EC 6.2.1.13)
Acetyl-CoA synthetase (ADP-forming) beta chain (EC 6.2.1.13)
Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)
Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)
Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Acetylglutamate kinase (EC 2.7.2.8)
Acetylornithine aminotransferase 1 (EC 2.6.1.11)
Acetylornithine aminotransferase 2 (EC 2.6.1.11)
Acetylornithine aminotransferase (EC 2.6.1.11)
Acetylornithine aminotransferase, mitochondrial precursor (EC 2.6.1.11) (ACOAT)
Acetylornithine deacetylase (EC 3.5.1.16)
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Acetyltransferase SypM
Aconitate hydratase 2 (EC 4.2.1.3)
Aconitate hydratase (EC 4.2.1.3)
Aconitate hydratase large subunit (EC 4.2.1.3)
Aconitate hydratase small subunit (EC 4.2.1.3)
Aconitate hydratase X, predicted
Acriflavin resistance protein
ACT domain protein
Actin-assembly inducing protein ActA precursor
Acting phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Activator of the mannose operon (transcriptional antiterminator), BglG family
Acyclic terpenes utilization regulator AtuR, TetR family
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)
Acyl carrier protein
Acyl carrier protein phosphodiesterase (EC 3.1.4.14)
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Acyl-CoA hydrolase (EC 3.1.2.20)
Acyl-CoA reductase (EC 1.2.1.50)
Acyl-CoA thioesterase II (EC 3.1.2.-)
Acyl-CoA thioesterase YciA, involved in membrane biogenesis
Acyl coenzyme A dehydrogenase, BldA, contributes to the proper timing of aerial mycelium formation and antibiotic production
Acyl coenzyme A dehydrogenase (EC 1.3.99.13)
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Acyl dehydratase
Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching
Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY
Acylphosphate phosphohydrolase (EC 3.6.1.7), putative
Acyl transferase (EC 2.3.1.-)
Acyltransferase (EC 2.3.1.-)
ADA regulatory protein
Additional component NikL of nickel ECF transporter
Additional lipoprotein component of predicted cobalamin ECF transporter
Additional periplasmic component NikK of nickel ECF transporter
Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Additional substrate-specific component CbiN of cobalt ECF transporter
Additional substrate-specific component NikN of nickel ECF transporter
Adenine deaminase (EC 3.5.4.2)
Adenine phosphoribosyltransferase (EC 2.4.2.7)
Adenine-specific methyltransferase (EC 2.1.1.72)
Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)
Adenosine deaminase (EC 3.5.4.4)
Adenosine kinase (EC 2.7.1.20)
Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Adenosylcobinamide-phosphate synthase
Adenosylhomocysteinase (EC 3.3.1.1)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
Adenylate cyclase
Adenylate cyclase (EC 4.6.1.1)
adenylate cyclase ExoY
Adenylate/guanylate cyclase (EC 4.6.1.2)
Adenylate kinase (EC 2.7.4.3)
Adenylosuccinate lyase (EC 4.3.2.2)
Adenylosuccinate synthetase (EC 6.3.4.4)
Adenylylsulfate kinase (EC 2.7.1.25)
Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
Adhesin of unknown specificity SdrC
Adhesin of unknown specificity SdrD
Adhesin of unknown specificity SdrE, similar to bone sialoprotein-binding protein Bbp
ADP compounds hydrolase NudE (EC 3.6.1.-)
ADP-dependent glucokinase (EC 2.7.1.147)
ADP-dependent phosphofructokinase (EC 2.7.1.146)
ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)
ADP-heptose--lipooligosaccharide heptosyltransferase, putative
ADP-heptose synthase (EC 2.7.-.-)
ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)
ADP-ribose 1'',2''-cyclic phosphate phophodiesterase
ADP-ribose 1"-phosphate phophatase
ADP-ribose pyrophosphatase (EC 3.6.1.13)
ADP-ribose pyrophosphatase, mitochondrial precursor (EC 3.6.1.13)
Aerobactin siderophore biosynthesis protein IucA
Aerobactin siderophore biosynthesis protein IucB
Aerobactin siderophore biosynthesis protein IucC
Aerobactin siderophore biosynthesis protein iucD
Aerobactin siderophore receptor IutA
Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate
Aerobic cobaltochelatase cobS subunit (EC 6.6.1.2)
Aerobic cobaltochelatase cobT subunit (EC 6.6.1.2)
Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
Aerobic respiration control protein arcA
Aerobic respiration control sensor protein arcB (EC 2.7.3.-)
Aerotaxis sensor receptor protein
(AF179595) Vco33
A-factor biosynthesis protein AfsA
Agglutination protein
Aggregation substance Asa1/PrgB
Agmatinase (EC 3.5.3.11)
Agmatine deiminase (EC 3.5.3.12)
Agmatine/putrescine antiporter, associated with agmatine catabolism
Agropine transporter ATP-binding protein AgtA
Agropine transporter periplasmic substrate-binding protein AgtB
Agropine transporter permease protein AgtC
Agropine transporter permease protein AgtD
Agropinic acid transporter ATP-binding protein AgaD
Agropinic acid transporter periplasmic substrate-binding protein AgaA
Agropinic acid transporter permease protein AgaB
Agropinic acid transporter permease protein AgaC
A/G-specific adenine glycosylase (EC 3.2.2.-)
A heat shock protein involved in translation, predicted protease
Alanine-anticapsin ligase BacD
Alanine dehydrogenase (EC 1.4.1.1)
Alanine racemase, biosynthetic (EC 5.1.1.1)
Alanine racemase, catabolic (EC 5.1.1.1)
Alanine racemase (EC 5.1.1.1)
Alanyl-tRNA synthetase domain protein
Alanyl-tRNA synthetase (EC 6.1.1.7)
Alanyl-tRNA synthetase (EC 6.1.1.7), mitochondrial
Alcaligin biosynthesis complex, large chain
Alcaligin biosynthesis complex, long chain
Alcaligin biosynthesis complex, short chain
Alcaligin biosynthesis enzyme (EC 1.-.-.-)
Alcohol dehydrogenase (EC 1.1.1.1)
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1)
Alcohol sulfotransferase (EC 2.8.2.2)
Aldehyde dehydrogenase 2B4, mitochondrial precursor (EC 1.2.1.3) (ALDH2a)
Aldehyde dehydrogenase A (EC 1.2.1.22)
Aldehyde dehydrogenase B (EC 1.2.1.22)
Aldehyde dehydrogenase (EC 1.2.1.3)
Aldehyde dehydrogenase (EC 1.2.1.3) in 4-hydroxyproline catabolic gene cluster
Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Aldehyde dehydrogenase in hypothetical Actinobacterial gene cluster
Aldehyde dehydrogenase in Methylamine utilization cluster
Aldehyde dehydrogenase, mitochondrial precursor (EC 1.2.1.3)
Aldo-keto reductase family 1 member B10 (EC 1.1.1.-)
Aldo-keto reductase family 1, member C3 (EC 1.1.1.-)
Aldolase YihT
Aldose 1-epimerase (EC 5.1.3.3)
Aldose 1-epimerase family protein YeaD
Aldose 1-epimerase family protein YphB
Aldose-ketose isomerase YihS
Alfa-L-rhamnosidase (EC 3.2.1.40) in L-rhamnose subsystem
Alginate biosynthesis protein Alg8
alginate biosynthesis protein AlgJ
Alginate biosynthesis protein AlgX
Alginate biosynthesis transcriptional activator
Alginate lyase (EC 4.2.2.3)
Alginate lyase precursor (EC 4.2.2.3)
alginate o-acetyltransferase AlgF
Alkaline phosphatase (EC 3.1.3.1)
Alkaline phosphatase isozyme conversion protein precursor (EC 3.4.11.-)
Alkaline phosphatase like protein
Alkaline phosphatase synthesis transcriptional regulatory protein
Alkanal monooxygenase alpha chain (EC 1.14.14.3)
Alkanal monooxygenase beta chain (EC 1.14.14.3)
Alkanesulfonate monooxygenase (EC 1.14.14.5)
Alkanesulfonates ABC transporter ATP-binding protein
Alkanesulfonates-binding protein
Alkanesulfonates transport system permease protein
Alkanesulfonate utilization operon LysR-family regulator CbI
Alkylated DNA repair protein AlkB
Alkylhydroperoxidase protein D
Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)
Alkyl hydroperoxide reductase subunit C-like protein
Alkylphosphonate utilization operon protein PhnA
All3116 protein
Allantoate amidohydrolase (EC 3.5.3.9)
Allantoicase (EC 3.5.3.4)
Allantoinase (EC 3.5.2.5)
Allantoin permease
Allene-oxide cyclase
Allene oxide synthase, chloroplast precursor (EC 4.2.1.92)
Allophanate hydrolase
Allophanate hydrolase subunit 1 (EC 3.5.1.54)
Allophanate hydrolase subunit 2 (EC 3.5.1.54)
Allophycocyanin alpha chain
Allophycocyanin-B
Allophycocyanin beta chain
Alpha-1,2-mannosidase
Alpha-1,3-N-acetylgalactosamine transferase PglA (EC 2.4.1.-)
alpha-1,3-rhamnosyltransferase
Alpha-1,4-N-acetylgalactosamine transferase PglH (EC 2.4.1.-)
Alpha-1,4-N-acetylgalactosamine transferase PglJ (EC 2.4.1.-)
alpha-1,6-rhamnosyltransferase
alpha-1,6-rhamnosyltransferase paralog
Alpha-1-peptidase inhibitor, protease inhibitor I04.001
Alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal precursor
Alpha-2-macroglobulin, protease inhibitor I39.001
Alpha-acetolactate decarboxylase (EC 4.1.1.5)
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)
Alpha-aminoadipate aminotransferase (EC 2.6.1.39)
alpha-amylase (EC 3.2.1.1)
Alpha-amylase (EC 3.2.1.1)
Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)
Alpha-amylase SusG (EC 3.2.1.1)
alpha-arabinosides ABC transport system, permease protein araP
alpha-arabinosides ABC transport system, permease protein araQ
alpha-arabinosides ABC transport system, substrate-binding protein araN
Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21)
Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-)
Alpha-fimbriae chaperone protein
Alpha-fimbriae major subunit
Alpha-fimbriae tip adhesin
Alpha-fimbriae usher protein
Alpha-galactosidase (EC 3.2.1.22)
Alpha-galactosidase precursor (EC 3.2.1.22)
Alpha-glucosidase AglA
Alpha-glucosidase (EC 3.2.1.20)
Alpha-glucosidase, family 31 of glycosyl hydrolases, COG1501
Alpha-glucosidase SusB (EC 3.2.1.20)
Alpha-glucosides-binding periplasmic protein AglE precursor
Alpha-glucoside transport ATP-binding protein AglK
Alpha-glucoside transport system permease protein AglG
Alpha-glucosyltransferase YihQ
Alpha-glycerophosphate oxidase (EC 1.1.3.21)
Alpha-hemolysin precursor
Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)
Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55)
Alpha-L-fucosidase (EC 3.2.1.51)
Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L- rhamnosyltransferase (EC 2.4.1.-)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-)
Alpha-mannosidase (EC 3.2.1.24)
Alpha-N-acetylglucosaminidase (EC 3.2.1.50)
Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55)
Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Alpha-related fimbriae chaperone 1
Alpha-related fimbriae chaperone 2
Alpha-related fimbriae major subunit
Alpha-related fimbriae minor subunit 1
Alpha-related fimbriae minor subunit 2
Alpha-related fimbriae usher protein
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
Alpha-xylosidase (EC 3.2.1.-)
alternate gene name: yzbB
Alternative cytochrome c oxidase polypeptide CoxM (EC 1.9.3.1)
Alternative cytochrome c oxidase polypeptide CoxN (EC 1.9.3.1)
Alternative cytochrome c oxidase polypeptide CoxO (EC 1.9.3.1)
Alternative cytochrome c oxidase polypeptide CoxP (EC 1.9.3.1)
Alternative dihydrofolate reductase 2
Alternative dihydrofolate reductase 3
Alternative Folylglutamate Synthase
alternative photosystem I reaction center subunit X (PsaK2)
alternative Ribulokinase (EC 2.7.1.16)
Altronate hydrolase (EC 4.2.1.7)
Altronate oxidoreductase (EC 1.1.1.58)
Amidase clustered with urea ABC transporter and nitrile hydratase functions
Amide synthase component of siderophore synthetase
Amidophosphoribosyltransferase (EC 2.4.2.14)
Amiloride-sensitive amine oxidase [copper-containing] precursor (EC 1.4.3.6)
Amino-acid ABC transporter ATP-binding protein PebC
Amino acid-binding ACT
Amino acid/metabolite permease in hypothetical Actinobacterial gene cluster
Amino acid permease in 4-hydroxyproline catabolic gene cluster
Amino acid permease in hypothetical Actinobacterial gene cluster
Amino acid regulated cytosolic protein
Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
Aminobenzoyl-glutamate transport protein
Aminodeoxychorismate lyase (EC 4.1.3.38)
Aminoglycoside N6'-acetyltransferase (EC 2.3.1.82)
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Aminomethyl transferase, THF-dependent (glycine cleavage system T protein) (EC 2.1.2.10), mitochondrial
Aminopeptidase C (EC 3.4.22.40)
Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.-)
Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.-)
Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)
Amino terminal CAAX family protease SkfD
Amino-terminal intein-mediated trans-splice
Aminotransferase, anthrose biosynthesis
Aminotransferase involved in DMSP breakdown
Aminotransferase ScrA
ammonium/methylammonium permease
Ammonium transporter
Ammonium transporter family
AmpG permease
AMP nucleosidase (EC 3.2.2.4)
AMP phosphohydrolase
Anaerobic C4-dicarboxylate transporter dcuC
Anaerobic dehydrogenases, typically selenocysteine-containing
Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)
Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.99.5)
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
Anaerobic nitric oxide reductase flavorubredoxin
Anaerobic sulfite reductase subunit A
Anaerobic sulfite reductase subunit B
Anaerobic sulfite reductase subunit C (EC 1.8.1.-)
Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-)
Anthranilate dioxygenase large subunit
Anthranilate dioxygenase reductase
Anthranilate dioxygenase small subunit
Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Anthranilate synthase, aminase component (EC 4.1.3.27)
anthrax toxin moiety, protective antigen, pagA formerly pag, plasmid pXO1, B. anthracis (M22589, P13423)
Antiadhesin Pls, binding to squamous nasal epithelial cells
Anti anti-sigma regulatory factor SypA
Antibiotic biosynthesis monooxygenase
Anti-cleavage anti-GreA transcription factor Gfh1
Antigen 85-A precursor (85A) (Antigen 85 complex A) (Ag85A) (Mycolyl transferase 85A) (EC 2.3.1.-)
Antiholin-like protein LrgA
Antimicrobial protein SkfB
Antimicrobial protein SkfC
Antiphagocytic M protein
Antirepressor [Bacteriophage A118]
Antirepressor [SA bacteriophages 11, Mu50B]
anti sigma b factor antagonist RsbV
anti-sigma B factor RsbT
Antisigma transmembrane sensor FpvR
Antithrombin III, protease inhibitor I04.018
ApaG protein
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
Apolipoprotein N-acyltransferase (EC 2.3.1.-)
Aquaporin (Major Intrinsic Protein Family)
Aquaporin Z
Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
Arabinose 5-phosphate isomerase (EC 5.3.1.13)
Arabinose operon protein araL
Arabinose operon protein araM
Arabinose operon regulatory protein
Arabinose-proton symporter
Arabinose-regulated TonB-dependent outer membrane receptor
archaeal ATPase, fused to C-terminal DUF234 domain
Archaeal DNA polymerase I (EC 2.7.7.7)
Archaeal DNA polymerase II large subunit (EC 2.7.7.7)
Archaeal DNA polymerase II small subunit (EC 2.7.7.7)
Archaeal S-adenosylmethionine synthetase (EC 2.5.1.6)
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Archaeal transcription factor E
Archaeal-type H+-ATPase subunit H
Archaeosine cluster gene X
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) PUA domain
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 1
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 2
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 5
Archease
AreA (Esterase for aryl ester catabolic pathway) (EC 3.1.1.-)
AreB (Aryl-alcohol dehydrogenase) (EC 1.1.1.90)
Arginase (EC 3.5.3.1)
Arginine ABC transporter, ATP-binding protein ArtP
Arginine ABC transporter, periplasmic arginine-binding protein ArtI
Arginine ABC transporter, periplasmic arginine-binding protein ArtJ
Arginine ABC transporter, permease protein ArtM
Arginine ABC transporter, permease protein ArtQ
Arginine/agmatine antiporter
Arginine decarboxylase, catabolic (EC 4.1.1.19)
Arginine decarboxylase (EC 4.1.1.19)
Arginine decarboxylase (EC 4.1.1.19) / Lysine decarboxylase (EC 4.1.1.18)
Arginine deiminase (EC 3.5.3.6)
Arginine exporter protein ArgO
Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109)
Arginine N-succinyltransferase, beta subunit (EC 2.3.1.109)
Arginine N-succinyltransferase (EC 2.3.1.109)
Arginine/ornithine ABC transporter, ATP-binding protein AotP
Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein
Arginine/ornithine ABC transporter, permease protein AotM
Arginine/ornithine ABC transporter, permease protein AotQ
Arginine/ornithine antiporter
Arginine/ornithine antiporter ArcD
Arginine pathway regulatory protein ArgR, repressor of arg regulon
Arginine permease RocE
Arginine-tRNA-protein transferase (EC 2.3.2.8)
Arginine utilization protein RocB
Arginine utilization regulatory protein RocR
Argininosuccinate lyase (EC 4.3.2.1)
Argininosuccinate synthase (EC 6.3.4.5)
Arginyl-tRNA synthetase (EC 6.1.1.19)
Arginyl-tRNA synthetase (EC 6.1.1.19), mitochondrial
Arogenate dehydratase (EC 4.2.1.91)
Arogenate dehydrogenase (EC 1.3.1.43)
Aromatic-amino-acid aminotransferase (EC 2.6.1.57)
Aromatic amino acid aminotransferase gamma (EC 2.6.1.57)
Aromatic amino acid transport protein aroP
Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family)
Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28)
Aromatic ring-opening dioxygenase
AroM protein
Arrested fork binding
Arsenate reductase (EC 1.20.4.1)
Arsenical pump-driving ATPase (EC 3.6.3.16)
Arsenical resistance operon repressor
Arsenical resistance operon trans-acting repressor ArsD
Arsenical-resistance protein ACR3
Arsenic efflux pump protein
Arsenic resistance protein ArsH
Arylsulfatase B precursor (EC 3.1.6.12)
Arylsulfatase (EC 3.1.6.1)
AscBF operon repressor
Asparagine-rich ORFan next to Sag operon
Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
Asparagine--tRNA ligase related protein
Asparaginyl-tRNA synthetase (EC 6.1.1.22)
Asparaginyl-tRNA synthetase (EC 6.1.1.22), mitochondrial
Aspartate 1-decarboxylase (EC 4.1.1.11)
Aspartate aminotransferase (EC 2.6.1.1)
Aspartate--ammonia ligase (EC 6.3.1.1)
Aspartate ammonia-lyase (EC 4.3.1.1)
Aspartate carbamoyltransferase (EC 2.1.3.2)
Aspartate carbamoyltransferase regulatory chain (PyrI)
Aspartate/ornithine carbamoyltransferase family protein protein YgeW
Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Aspartokinase (EC 2.7.2.4)
Aspartokinase (EC 2.7.2.4) associated with ectoine biosynthesis
Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.-)
Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.-)
Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.-)
Aspartyl-tRNA(Asn) synthetase
Aspartyl-tRNA synthetase (EC 6.1.1.12)
Aspartyl-tRNA synthetase (EC 6.1.1.12), mitochondrial
Asp-X dipeptidase
Assimilatory nitrate reductase large subunit (EC:1.7.99.4)
ATPase, AFG1 family
ATPase component BioM of energizing module of biotin ECF transporter
ATPase component CbiO of energizing module of cobalt ECF transporter
ATPase component MtsB of energizing module of methionine-regulated ECF transporter
ATPase component NikO of energizing module of nickel ECF transporter
ATPase component of energizing module of predicted pantothenate ECF transporter
ATPase component of general energizing module of ECF transporters
ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter
ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter
ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11)
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)
ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB11
ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB4
ATPase with chaperone activity, associated with Flp pilus assembly
ATPase YjeE, predicted to have essential role in cell wall biosynthesis
ATP-binding protein p271
ATP-binding protein PhnN
ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17), ethanolamine utilization
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease ATP-binding subunit ClpA
ATP-dependent Clp protease, ATP-binding subunit ClpC
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
ATP-dependent DNA helicase pcrA (EC 3.6.1.-)
ATP-dependent DNA helicase RecG (EC 3.6.1.-)
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase, RecQ family
ATP-dependent DNA helicase Rep
ATP-dependent DNA helicase UvrD/PcrA
ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog
ATP-dependent DNA helicase UvrD/PcrA, clostridial paralog
ATP-dependent DNA helicase UvrD/PcrA, clostridial paralog 2
ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog
ATP-dependent DNA helicase UvrD/PcrA/Rep
ATP-dependent DNA helicase UvrD/PcrA/Rep, cyanobacterial paralog
ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 1
ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 2
ATP-dependent DNA helicase UvrD/PcrA/Rep family, Francisella type
ATP-dependent DNA ligase (EC 6.5.1.1)
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
ATP-dependent DNA ligase (EC 6.5.1.1) LigC
ATP-dependent helicase, DEAD/DEAH box family, associated with Flp pilus assembly
ATP-dependent helicase DinG/Rad3
ATP-dependent hsl protease ATP-binding subunit HslU
ATP-dependent nuclease, subunit A
ATP-dependent nuclease, subunit B
ATP-dependent protease domain protein (EC 3.4.21.-)
ATP-dependent protease HslV (EC 3.4.25.-)
ATP-dependent protease La (EC 3.4.21.53)
ATP-dependent protease La (EC 3.4.21.53) LonB Type I
ATP-dependent protease La (EC 3.4.21.53) Type I
ATP-dependent protease La (EC 3.4.21.53) Type II
ATP-dependent protease LonB-like Type I
ATP-dependent RNA helicase Atu1833
ATP-dependent RNA helicase BA2475
ATP-dependent RNA helicase Bcep18194_A5658
ATP-dependent RNA helicase DbpA
ATP-dependent RNA helicase NGO0650
ATP-dependent RNA helicase PA3950
ATP-dependent RNA helicase RhlB
ATP-dependent RNA helicase RhlE
ATP-dependent RNA helicase SO1501
ATP-dependent RNA helicase SrmB
ATP-dependent RNA helicase VC1407
ATP-dependent RNA helicase VCA0061
ATP-dependent RNA helicase VCA0768
ATP-dependent RNA helicase VCA0990
ATP-dependent RNA helicase VF1437
ATP-dependent RNA helicase VVA0939
ATP-dependent RNA helicase YfmL
ATP-dependent RNA helicase YqfR
ATP-dependent RNA helicase YxiN
ATP diphosphatase (EC 3.6.1.8)
ATP/GTP-binding site motif A
ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)
ATP phosphoribosyltransferase (EC 2.4.2.17)
ATP phosphoribosyltransferase regulatory subunit, divergent variant (EC 2.4.2.17)
ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)
ATP synthase A chain (EC 3.6.3.14)
ATP synthase alpha chain (EC 3.6.3.14)
ATP synthase B chain (EC 3.6.3.14)
ATP synthase B' chain (EC 3.6.3.14)
ATP synthase beta chain (EC 3.6.3.14)
ATP synthase C chain (EC 3.6.3.14)
ATP synthase delta chain (EC 3.6.3.14)
ATP synthase epsilon chain (EC 3.6.3.14)
ATP synthase gamma chain (EC 3.6.3.14)
ATP synthase protein I
AttE component of AttEFGH ABC transport system
AttF component of AttEFGH ABC transport system
AttG component of AttEFGH ABC transport system
AttH component of AttEFGH ABC transport system
Autoinducer 1 sensor kinase/phosphatase LuxN (EC 2.7.3.-) (EC 3.1.3.-)
Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)
Autoinducer 2 (AI-2) modifying protein LsrG
Autoinducer 2-binding periplasmic protein LuxP precursor
Autoinducer 2 sensor kinase/phosphatase LuxQ (EC 2.7.3.-) (EC 3.1.3.-)
Autoinducer synthesis protein LuxI
Autolysin [SA bacteriophages 11, Mu50B]
Autolysin sensor kinase (EC 2.7.3.-)
Autolysis histidine kinase LytS
Autolysis response regulater LytR
B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2)
Bacillolysin (EC 3.4.24.28)
Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE
Bacillosamine/Legionaminic acid biosynthesis N-acetyltrasferase PglD (PseH and NeuD homolog)
Bacilysin biosynthesis oxidoreductase BacC
Bacilysin biosynthesis protein BacA
Bacilysin biosynthesis protein BacB
Bacilysin exporter protein BacE
Bacitracin export ATP-binding protein BceA
Bacitracin export permease protein BceB
Bacterial proteasome-activating AAA-ATPase (PAN)
Bacteriochlorophyllide c C12 methyltransefase BchR
Bacteriochlorophyllide c C8 methyltransefase BchQ
Bacteriocin immunity protein BlpL
Bacteriocin-like peptide I BlpI
Bacteriocin-like peptide J BlpJ
Bacteriocin-like peptide M BlpM
Bacteriocin-like peptide N BlpN
Bacteriocin-like peptide O BlpO
Bacteriocin production protein
Bacterioferritin
Bacterioferritin-associated ferredoxin
bacteriophytochrome heme oxygenase BphO
Bacterocin transport accessory protein
Bactriocin immunity protein BlpX
Bactriocin immunity protein BlpY
BarA-associated response regulator UvrY (= GacA = SirA)
BarA sensory histidine kinase (= VarS = GacS)
BatA (Bacteroides aerotolerance operon)
BatB
BatC
BatD
BatE
benABC operon transcriptional activator BenR
Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)
Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)
Benzoate 1,2-dioxygenase (EC 1.14.12.10)
Benzoate catabolic operon transcription regulator
Benzoate-CoA ligase (EC 6.2.1.25)
benzoate degradation ring-cleavage hydrolase
benzoate dioxygenase, ferredoxin reductase component
benzoate MFS transporter BenK
benzoate-specific porin
Benzoate transport, ATPase component
Benzoate transport, ATP binding protein
Benzoate transport, extracellular ligand-binding receptor
Benzoate transport, inner-membrane translocator
Benzoate transport, inner-membrane translocator precursor
Benzoate transport, inner membrane transport component
Benzoate transport protein
Benzoate transport related protein
Benzoylacetate CoA-ligase
benzoyl-CoA-dihydrodiol lyase (BoxC)
Benzoyl-CoA oxygenase component A
Benzoyl-CoA oxygenase component B
Benzoylformate decarboxylase (EC 4.1.1.7)
Benzoylsuccinyl-CoA thiolase alpha subunit (EC:2.3.1.-)
Benzoylsuccinyl-CoA thiolase beta subunit (EC:2.3.1.-)
Benzylsuccinate synthase activating enzyme (EC 1.97.1.4)
Benzylsuccinate synthase alpha subunit (EC 4.1.99.11)
Benzylsuccinate synthase beta subunit (EC 4.1.99.11)
Benzylsuccinate synthase gamma subunit (EC 4.1.99.11)
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA (EC 3.6.3.42)
Beta-1,3-glucosyltransferase
Beta-1,4-galactosyltransferase
Beta-1,4-N-acetylgalactosaminyltransferase (EC 2.4.1.-)
Beta-amylase (EC 3.2.1.2)
Beta-amyrin synthase
Beta-carotene hydroxylase
Beta-carotene ketolase (EC 1.14.-.-)
Beta-fimbriae chaperone protein
Beta-fimbriae probable major subunit
Beta-fimbriae usher protein
Beta-galactosidase 3
Beta-galactosidase (EC 3.2.1.23)
Beta-galactosidase large subunit (EC 3.2.1.23)
Beta-galactosidase small subunit (EC 3.2.1.23)
Beta-glucanase precursor (EC 3.2.1.73)
Beta-glucosidase (EC 3.2.1.21)
Beta-glucoside bgl operon antiterminator, BglG family
Beta-glucuronidase (EC 3.2.1.31)
Beta-hexosaminidase (EC 3.2.1.52)
Betaine aldehyde dehydrogenase (EC 1.2.1.8)
Betaine--homocysteine S-methyltransferase (EC 2.1.1.5)
Betaine reductase component B alpha subunit (EC 1.21.4.4)
Betaine reductase component B beta subunit (EC 1.21.4.4)
Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Beta-ketoadipyl CoA thiolase (EC 2.3.1.9)
Beta-lactamase
Beta-lactamase AmpS
Beta-lactamase (Cephalosporinase) (EC 3.5.2.6)
Beta-lactamase class A
Beta-lactamase, class C
Beta-lactamase class C and other penicillin binding proteins
Beta-lactamase class D
Beta-lactamase CTX-M-16
Beta-lactamase (EC 3.5.2.6)
beta-lactamase-like
Beta-lactamase PSE-2 precursor (EC 3.5.2.6)
Beta-lactamase regulatory sensor-transducer BlaR1
Beta-lactamase repressor BlaI
Beta-lysine acetyltransferase (EC 2.3.1.-)
Beta-mannosidase (EC 3.2.1.25)
Beta N-acetyl-glucosaminidase (EC 3.2.1.52)
Beta-phosphoglucomutase (EC 5.4.2.6)
beta-ribofuranosylaminobenzene 5'-phosphate synthase
Beta-ureidopropionase (EC 3.5.1.6)
Beta-ureidopropionase, eukaryotic type (EC 3.5.1.6)
Beta-xylosidase (EC 3.2.1.37)
BH1670 unknown conserved protein in B. subtilis
BH2577 unknown conserved protein in B. subtilis
BH3430 unknown conserved protein
BH3433 unknown conserved protein in B. subtilis
Bicarbonate transporter, bicarbonate binding protein
Bicarbonate transporter, bicarbonate binding protein 2
Bicarbonate transport system permease protein
Bifunctional autolysin Atl
bifunctional hemolysin-adenylate cyclase precursor
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
Bilin biosynthesis protein CpeY
Bilin biosynthesis protein CpeZ
Bilin biosynthesis protein MpeU
Bilin biosynthesis protein PecE
Bilin biosynthesis protein PecF
Biliverdin reductase (EC 1.3.1.24)
Binding-protein-dependent transport systems inner membrane component:ATP/GTP-binding site motif A (P-loop) :TrkA-N:Potassium e
Biofilm operon icaABCD HTH-type negative transcriptional regulator IcaR
Biofilm PGA outer membrane secretin PgaA
Biofilm PGA synthesis auxiliary protein PgaD
Biofilm PGA synthesis deacetylase PgaB (EC 3.-)
Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-)
Biopolymer transport ExbD protein
Biopolymer transport protein ExbD1
Biopolymer transport protein ExbD/TolR
Biosynthetic arginine decarboxylase (EC 4.1.1.19)
Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)
Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)
Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)
Biotin carboxylase of methylcrotonyl-CoA carboxylase (EC 6.3.4.14)
Biotin carboxylase of Propionyl-CoA carboxylase (EC 6.3.4.14)
Biotin carboxyl carrier protein of acetyl-CoA carboxylase
Biotin carboxyl carrier protein of glutaconyl-CoA decarboxylase
Biotin carboxyl carrier protein of methylcrotonyl-CoA carboxylase
Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase
Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase
Biotin carboxyl carrier protein of oxaloacetate decarboxylase
Biotin carboxyl carrier protein of Propionyl-CoA carboxylase
Biotin operon repressor
Biotin-protein ligase (EC 6.3.4.15)
Biotin sulfoxide reductase (EC 1.-.-.-)
Biotin synthase (EC 2.8.1.6)
Biotin synthesis protein bioC
Biotin synthesis protein bioG
Biotin synthesis protein bioH
Biotin synthesis protein bioK
Biotin synthesis protein bioZ
Biphenyl-2,3-diol 1,2-dioxygenase (EC 1.13.11.39)
biphenyl-2,3-diol 1,2-dioxygenase III-related protein
biphenyl-2,3-diol 1,2-dioxygenase III-related protein VCA0463 VCA0328 VCA0341
Biphenyl dioxygenase alpha subunit (EC 1.14.12.18)
Biphenyl dioxygenase beta subunit (EC 1.14.12.18)
Biphenyl dioxygenase system ferredoxin component
Biphenyl dioxygenase system ferredoxin--NAD( ) reductase component (EC 1.18.1.3)
Bipolar DNA helicase
Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41)
BlpT protein, fusion
BlpZ protein, fusion
Blr3520 protein homolog, hypothetical protein
Blue copper oxidase CueO precursor
Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1)
Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Branched-chain amino acid transport ATP-binding protein livF (TC 3.A.1.4.1)
Branched-chain amino acid transport ATP-binding protein livG (TC 3.A.1.4.1)
Branched-chain amino acid transport system permease protein livM (TC 3.A.1.4.1)
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldA
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldB
Broad-substrate range phospholipase C (EC 3.1.4.3)
Bsl0345 protein
B. subtilis YutD-like protein lmo2402
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)
Butyrate kinase (EC 2.7.2.7)
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
C-1'-hydroxylase CruF
C3-degrading proteinase
C3 family ADP-ribosyltransferase (EC 2.4.2.-)
C4 aminotransferase specific for PseB product (PseC, second step of pseudaminic acid biosynthesis)
C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
C4-type zinc finger protein, DksA/TraR family
C50 carotenoid epsilon cyclase
C5a peptidase (EC 3.4.21.-)
Ca(2+) Citrate symporter (TC 2.A.11.1.2)
Cadherin-4 precursor
Cadmium efflux system accessory protein
Cadmium resistance protein
Cadmium-transporting ATPase (EC 3.6.3.3)
Caffeic-o-methyltransferase (EC 2.1.1.68)
calmodulin sensitive adenylate cyclase, edema factor, cya, plasmid pXO1, B. anthracis (M23179, M24074)
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
cAMP-dependent Kef-type K+ transport system
CAMP factor
CAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily
cAMP-specific 3',5'-cyclic phosphodiesterase 4A (EC 3.1.4.17)
Candidate substrate-specific domain of ECF transporters in Mycobacteria
Cannabinoid receptor 1
Cannabinoid receptor 2
CapK protein, putative
Capsular polysaccharide ABC transporter, ATP-binding protein KpsT
Capsular polysaccharide ABC transporter, permease protein KpsM
Capsular polysaccharide biosynthesis/export periplasmic protein WcbA
Capsular polysaccharide biosynthesis/export periplasmic protein WcbC
Capsular polysaccharide biosynthesis fatty acid synthase WcbR
Capsular polysaccharide biosynthesis heptosyltransferase HddD
capsular polysaccharide biosynthesis protein
Capsular polysaccharide biosynthesis protein CapD
Capsular polysaccharide biosynthesis protein Cps4E
Capsular polysaccharide biosynthesis protein CpsK(V)
capsular polysaccharide biosynthesis protein, putative
Capsular polysaccharide biosynthesis protein WcbF
Capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent epimerase/dehydratase family
Capsular polysaccharide biosynthesis protein WcbQ
Capsular polysaccharide biosythesis protein CpsI
Capsular polysaccharide export system inner membrane protein KpsE
Capsular polysaccharide export system periplasmic protein KpsD
Capsular polysaccharide export system protein KpsC
Capsular polysaccharide export system protein KpsF
Capsular polysaccharide export system protein KpsS
Capsular polysaccharide glycosyltransferase biosynthesis protein WcbB
Capsular polysaccharide repeating-unit polymerase CpsH
Capsular polysaccharide repeat unit transporter CpsL
Capsular polysaccharide synthesis enzyme Cap5A
Capsular polysaccharide synthesis enzyme Cap5B
Capsular polysaccharide synthesis enzyme Cap5C
Capsular polysaccharide synthesis enzyme Cap5D
Capsular polysaccharide synthesis enzyme Cap5E
Capsular polysaccharide synthesis enzyme Cap5F
Capsular polysaccharide synthesis enzyme Cap5G
Capsular polysaccharide synthesis enzyme Cap5H
Capsular polysaccharide synthesis enzyme Cap5I
Capsular polysaccharide synthesis enzyme Cap5J
Capsular polysaccharide synthesis enzyme Cap5K
Capsular polysaccharide synthesis enzyme Cap5L
Capsular polysaccharide synthesis enzyme Cap5M
Capsular polysaccharide synthesis enzyme Cap5N
Capsular polysaccharide synthesis enzyme Cap5O
Capsular polysaccharide synthesis enzyme Cap5P
Capsular polysaccharide synthesis enzyme Cap8A
Capsular polysaccharide synthesis enzyme Cap8B
Capsular polysaccharide synthesis enzyme Cap8C
Capsular polysaccharide synthesis enzyme Cap8D
Capsular polysaccharide synthesis enzyme Cap8E
Capsular polysaccharide synthesis enzyme Cap8F
Capsular polysaccharide synthesis enzyme Cap8G
Capsular polysaccharide synthesis enzyme Cap8H
Capsular polysaccharide synthesis enzyme Cap8I
Capsular polysaccharide synthesis enzyme Cap8J
Capsular polysaccharide synthesis enzyme Cap8K
Capsular polysaccharide synthesis enzyme Cap8L
Capsular polysaccharide synthesis enzyme Cap8M
Capsular polysaccharide synthesis enzyme Cap8N
Capsular polysaccharide synthesis enzyme Cap8O
Capsular polysaccharide synthesis enzyme Cap8P
Capsular polysaccharide synthesis enzyme CpsA, sugar transferase
Capsular polysaccharide synthesis enzyme CpsB
Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export
Capsular polysaccharide synthesis enzyme CpsD, exopolysaccharide synthesis
Capsular polysaccharide synthesis enzyme CpsE
Capsular polysaccharide synthesis enzyme cpsF, glycosyltransferase
Capsular polysaccharide synthesis enzyme cpsG, Lipid A core - O-antigen ligase
Capsular polysaccharide synthesis enzyme cpsH
Capsular polysaccharide synthesis enzyme cpsI, glycosyltransferase
Capsular polysaccharide synthesis enzyme cpsJ, Membrane protein, export of O-antigen and teichoic acid
Capsule synthesis positive regulator AcpA
Capsule synthesis positive regulator AcpB
Carbamate kinase (EC 2.7.2.2)
Carbamate kinase-like protein YqeA
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Carbamoyltransferase in large core OS assembly cluster
Carbon dioxide concentrating mechanism protein CcmO
Carbonic anhydrase (EC 4.2.1.1)
Carbonic anhydrase, gamma class (EC 4.2.1.1)
Carbon monoxide dehydrogenase
Carbon monoxide dehydrogenase CooS subunit (EC 1.2.99.2)
carbon monoxide dehydrogenase D protein
carbon monoxide dehydrogenase E protein
Carbon-monoxide dehydrogenase form II, large subunit (EC 1.2.99.2)
Carbon monoxide dehydrogenase form I, large chain( EC:1.2.99.2 )
Carbon monoxide dehydrogenase F protein
carbon monoxide dehydrogenase G protein
Carbon monoxide dehydrogenase large chain (EC 1.2.99.2)
Carbon monoxide dehydrogenase large chain (EC 1.2.99.2) parolog without usual motifs
Carbon monoxide dehydrogenase large chain (EC 1.2.99.2) without typical motifs
Carbon monoxide dehydrogenase medium chain (EC 1.2.99.2)
carbon monoxide dehydrogenase operon C protein
Carbon monoxide dehydrogenase small chain (EC 1.2.99.2)
Carbon monoxide-induced hydrogenase iron-sulfur protein CooX
Carbon monoxide-induced hydrogenase large subunit CooH
Carbon monoxide-induced hydrogenase membrane protein CooM
Carbon monoxide-induced hydrogenase NuoC-like protein CooU
Carbon monoxide-induced hydrogenase proton translocating subunit CooK
Carbon monoxide-induced hydrogenase small subunit CooL
Carbon monoxide-responsive transcriptional activator CooA
Carbon starvation protein A
Carbon starvation protein A paralog
Carbon storage regulator
Carboxyl-terminal protease (EC 3.4.21.102)
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-)
Carboxypeptidase U, proteinase M14.009
Carboxysome protein CcmL
Carboxysome protein CcmM
Carboxysome protein CcmN
carboxysome shell protein CsoS1
carboxysome shell protein CsoS2
carboxysome shell protein CsoS3
Carboxy-terminal intein-mediated trans-splice
Cardiolipin synthetase (EC 2.7.8.-)
Carnitine operon protein CaiE
Carnitine racemase (EC 5.-.-.-)
Carnitinyl-CoA dehydratase (EC 4.2.1.-)
Carotenoid cis-trans isomerase (EC 5.2.-.-)
Catabolite control protein A
Catabolite repression HPr-like protein Crh
Catalase (EC 1.11.1.6)
Catalitic subunit of carbazole 1,9a-dioxygenase
Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A
Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit B
Catechol 1,2-dioxygenase 1 (EC 1.13.11.1)
Catechol 1,2-dioxygenase (EC 1.13.11.1)
Catechol 2,3-dioxygenase (EC 1.13.11.2)
Catechol siderophore ABC transporter, ATP-binding component
Catechol siderophore ABC transporter, permease component
Catechol siderophore ABC transporter, substrate-binding protein
Cation ABC transporter, periplasmic cation-binding protein, PA2407 homolog
Cation efflux system protein CusA
Cation efflux system protein CusC precursor
Cation efflux system protein cusF precursor
CblX, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase
CblY, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase
CblZ, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase
CBS domain protein sometimes clustered with YjeE
cb-type cytochrome c oxidase subunit IV [EC:1.9.3.1]
CcdA protein (antitoxin to CcdB)
CcdB toxin protein
Ccs1/ResB-related putative cytochrome C-type biogenesis protein
CD44 antigen precursor
Cd(II)/Pb(II)-responsive transcriptional regulator
CDK-activating kinase assembly factor MAT1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)
CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)
CDP-glycerol: N-acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenyl glycerophosphotransferase
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12)
CDP-ribitol:poly(ribitol phosphate) ribitol phosphotransferase
CDS_ID OB2202
Cell division control protein 6
cell division cycle 37 homolog (S. cerevisiae)
Cell division inhibitor
cell-division initiation protein
Cell division initiation protein DivIVA
Cell division protein BolA
Cell division protein DivIC
Cell division protein FtsA
Cell division protein FtsB
Cell division protein FtsH (EC 3.4.24.-)
Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)
Cell division protein ftsJ
Cell division protein FtsK
Cell division protein FtsL
Cell division protein FtsN
Cell division protein ftsQ
Cell division protein FtsQ
Cell division protein FtsQ homolog
Cell division protein FtsW
Cell division protein FtsX
Cell division protein FtsZ (EC 3.4.24.-)
Cell division protein GpsB, coordinates the switch between cylindrical and septal cell wall synthesis by re-localization of PBP1
Cell division protein MraZ
cell division protein PELOTA
Cell division protein ZipA
Cell division topological specificity factor MinE
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)
Cell division trigger factor (EC 5.2.1.8)
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F1 (as in PMID19099556)
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2 (as in PMID19099556)
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F4 (as in PMID19099556)
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M (as in PMID19099556)
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556)
Cell envelope-bound metalloprotease, Camelysin (EC 3.4.24.-)
cell invasion protein SipB
Cell invasion protein sipC (Effector protein SipC)
Cell invasion protein SipD (Salmonella invasion protein D)
Cellobiose phosphotransferase system YdjC-like protein
Cell-shape determining protein MreBH
Cell surface protein IsdA1
Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC
Cell surface protein Shp, transfers heme from hemoglobin to apo-SiaA/HtsA
Cell surface receptor IsdB for hemoglobin and hemoglobin-haptoglobin complexes
Cell surface receptor IsdH for hemoglobin-haptoglobin complexes
Cell wall-associated murein hydrolase LytA
Cell wall-associated murein hydrolase LytC
Cell wall surface anchor family protein
Cell wall surface anchor family protein, FPXTG motif
Cell wall surface anchor family protein, LPXTG motif
Cephalosporin hydroxylase
CFA/I fimbrial auxiliary subunit
CFA/I fimbrial chaperone
CFA/I fimbrial major subunit
CFA/I fimbrial minor adhesin
CFA/I fimbrial subunit C usher protein
Chalcone--flavonone isomerase (EC 5.5.1.6)
Chalcone synthase (EC 2.3.1.74)
chaperone FimC
Chaperone HdeA
Chaperone HdeB
Chaperone-modulator protein CbpM
Chaperone protein DnaJ
Chaperone protein DnaK
Chaperone protein HscA
Chaperone protein HscB
Chaperone protein HtpG
Chaperone protein SicA (Salmonella invasin chaperone)
Chaperonin (heat shock protein 33)
Chemotaxis protein CheC -- inhibitor of MCP methylation
Chemotaxis protein CheD
Chemotaxis protein CheV (EC 2.7.3.-)
Chemotaxis protein CheX
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
Chemotaxis response - phosphatase CheZ
Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61)
Chitinase (EC 3.2.1.14)
Chitin binding protein
Chitin catabolic cascade sensor histidine kinase ChiS
Chitobiose phosphorylase (EC 2.4.1.-)
Chitobiose-specific 6-phospho-beta-glucosidase ChbF (EC 3.2.1.86)
Chitobiose-specific regulator ChbR, AraC family
Chitodextrinase precursor (EC 3.2.1.14)
ChlD component of cobalt chelatase involved in B12 biosynthesis
ChlI component of cobalt chelatase involved in B12 biosynthesis
Chlorocatechol 1,2-dioxygenase
Chlorogenate esterase
Chlorophyll a(b) binding protein, photosystem II CP43 protein (PsbC) homolog
Chlorophyll a, chlorophyllide a oxygenase (EC 1.14.13.-)
Chlorophyllase (EC 3.1.1.14)
Chlorophyll a synthase ChlG (EC 2.5.1.62)
Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
chloroplast NADH dehydrogenase ND4
Chlorosome protein A
Chlorosome protein B
Chlorosome protein C
Chlorosome protein D
Chlorosome protein E
Chlorosome protein F
Chlorosome protein H
Chlorosome protein I, 2Fe-2S ferredoxin
Chlorosome protein J, 2Fe-2S ferredoxin
Chlorosome protein X
Choline ABC transporter ATP-binding protein
Choline ABC transporter permease protein
Choline ABC transport system, ATP-binding protein OpuBA
Choline-binding lipoprotein
Choline binding protein A
Choline binding protein D
Choline dehydrogenase (EC 1.1.99.1)
Choline kinase (EC 2.7.1.32)
Choline permease LicB
Cholinephosphate cytidylyltransferase (EC 2.7.7.15)
Choline-sulfatase (EC 3.1.6.6)
Chondroitinase (chondroitin lyase)
Chorismate mutase (EC 5.4.99.5)
Chorismate mutase I (EC 5.4.99.5)
Chorismate mutase II (EC 5.4.99.5)
Chorismate mutase III (EC 5.4.99.5)
Chorismate--pyruvate lyase (EC 4.1.3.40)
Chorismate synthase (EC 4.2.3.5)
Chromosomal replication initiator protein DnaA
Chromosome partitioning protein parA
Chromosome partition protein MukB
Chromosome partition protein MukE
Chromosome partition protein MukF
Chromosome partition protein smc
Chromosome (plasmid) partitioning protein ParA
Chromosome (plasmid) partitioning protein ParB
Chromosome replication initiation protein dnaD
CidA-associated membrane protein CidB
CI-like repressor [SA bacteriophages 11, Mu50B]
CI-like repressor, superantigen-encoding pathogenicity islands SaPI
cinnamoyl-CoA:NADP+ oxidoreductase (E.C. 1.2.1.44)
Cinnamoyl-CoA reductase (EC 1.2.1.44)
Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195)
Circadian clock protein KaiA
Circadian clock protein KaiC
Circadian input kinase A
Circadian oscillation regulator KaiB
Circadian period extender Pex
Circadian phase modifier
Cirhin
Citrate lyase alpha chain (EC 4.1.3.6)
Citrate lyase beta chain (EC 4.1.3.6)
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Citrate lyase transcriptional regulator citI
[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Citrate Succinate antiporter
Citrate Succinate antiporter (TC 2.A.47.3.2)
Citrate synthase (EC 2.3.3.1)
Citrate synthase, mitochondrial precursor (EC 2.3.3.1)
Citrate synthase (si) (EC 2.3.3.1)
Citronellol and citronellal dehydrogenase
Citronellyl-CoA dehydrogenase
clavaldehyde dehydrogenase
Clock-associated two-component sensor histidine kinase SasA
Clostridial MutS2-related protein
Clostridium cellulosome enzyme, dockerin type I precursor
ClpB protein
ClpXP protease specificity-enhancing factor
Clumping factor ClfA, fibrinogen-binding protein
Clumping factor ClfB, fibrinogen binding protein
CMP-Kdo synthetase, KpsU
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase (EC 2.4.99.-)
CoA-acylating propionaldehyde dehydrogenase
Co-activator of prophage gene expression IbrA
Co-activator of prophage gene expression IbrB
Coagulation factor IXa, protease S01.214
Coagulation factor V
Coagulation factor VIIa, protease S01.215
Coagulation factor VIII
Coagulation factor Xa, protease S01.216
Coagulation factor XIa, protease S01.213
Coagulation factor XIIa, protease S01.211
Coagulation factor XIII, protein-glutamine gamma-glutamyltransferase (EC 2.3.2.13)
Cobalamin biosynthesis protein BluB
Cobalamin biosynthesis protein CbiG
Cobalamin biosynthesis protein CobG
Cobalamine-related hypothetical metal-binding protein CrdX
Cobalamin synthase
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Cobalt-precorrin-3b C17-methyltransferase
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Cobalt-precorrin-6 synthase, anaerobic
Cobalt-precorrin-6x reductase (EC 1.3.1.54)
Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family
Cobalt-zinc-cadmium resistance protein
Cobalt-zinc-cadmium resistance protein CzcA
Cobalt-zinc-cadmium resistance protein CzcD
CoB--CoM heterodisulfide reductase 2 iron-sulfur subunit D (EC 1.8.98.1)
CoB--CoM heterodisulfide reductase 2 subunit E (EC 1.8.98.1)
CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)
CoB--CoM-reducing hydrogenase (Cys) alpha subunit
CoB--CoM-reducing hydrogenase (Cys) beta subunit
CoB--CoM-reducing hydrogenase (Cys) delta subunit
CoB--CoM-reducing hydrogenase (Cys) gamma subunit
CoB--CoM-reducing hydrogenase (Sec) alpha subunit
CoB--CoM-reducing hydrogenase (Sec) alpha' subunit
CoB--CoM-reducing hydrogenase (Sec) beta subunit
CoB--CoM-reducing hydrogenase (Sec) delta subunit
CoB--CoM-reducing hydrogenase (Sec) gamma subunit
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
Cob(II)alamin reductase
Cob(III)alamin reductase
CobN component of cobalt chelatase involved in B12 biosynthesis
CobW GTPase involved in cobalt insertion for B12 biosynthesis
Cobyric acid synthase
Cobyrinic acid A,C-diamide synthase
CO dehydrogenase accessory protein CooC (nickel insertion)
CO dehydrogenase/acetyl-CoA synthase, acetyl-CoA synthase subunit (EC 2.3.1.169)
CO dehydrogenase/acetyl-CoA synthase, CO dehydrogenase subunit (EC 1.2.99.2)
CO dehydrogenase/acetyl-CoA synthase subunit alpha, CO dehydrogenase subcomplex (EC 1.2.99.2)
CO dehydrogenase/acetyl-CoA synthase subunit beta, acetyl-CoA synthase (EC 2.3.1.169)
CO dehydrogenase/acetyl-CoA synthase subunit delta, corrinoid iron-sulfur subcomplex small subunit
CO dehydrogenase/acetyl-CoA synthase subunit epsilon, CO dehydrogenase subcomplex (EC 1.2.99.2)
CO dehydrogenase/acetyl-CoA synthase subunit gamma, corrinoid iron-sulfur subcomplex large subunit
CO dehydrogenase iron-sulfur protein CooF (EC 1.2.99.2)
CO dehydrogenases maturation factor, CoxF family
Coenzyme B synthesis from 2-oxoglutarate: steps 1, 6, and 10
Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 [large subunit]
Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 [small subunit]
Coenzyme B synthesis from 2-oxoglutarate: steps 5, 9, and 13
Coenzyme F420-0:L-glutamate ligase
Coenzyme F420-1:L-glutamate ligase
Coenzyme F420-dependent oxidoreductase
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoA
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoB
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoC
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoD
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoF
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoH
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoI
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoJ
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoJ2
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoK
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoL
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoM
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoN
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoO
Coenzyme F420 hydrogenase alpha subunit (FrcA) (EC 1.12.98.1)
Coenzyme F420 hydrogenase alpha subunit (FruA) (EC 1.12.98.1)
Coenzyme F420 hydrogenase beta subunit (FrcB) (EC 1.12.98.1)
Coenzyme F420 hydrogenase beta subunit (FruB) (EC 1.12.98.1)
Coenzyme F420 hydrogenase gamma subunit (FrcG) (EC 1.12.98.1)
Coenzyme F420 hydrogenase gamma subunit (FruG) (EC 1.12.98.1)
Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)
Coenzyme F420-reducing hydrogenase, alpha subunit
Coenzyme F420-reducing hydrogenase, beta subunit
Coenzyme F420-reducing hydrogenase, gamma subunit
Coenzyme gamma-F420-2:L-glutamate ligase
Coenzyme PQQ synthesis protein A
Coenzyme PQQ synthesis protein B
Coenzyme PQQ synthesis protein C
Coenzyme PQQ synthesis protein D
Coenzyme PQQ synthesis protein E
Coenzyme PQQ synthesis protein F (EC 3.4.99.-)
Cof protein, HD superfamily hydrolase
COG0488: ATPase components of ABC transporters with duplicated ATPase domains
COG0523: Putative GTPases (G3E family)
COG0536: GTP-binding protein Obg
COG0613, Predicted metal-dependent phosphoesterases (PHP family)
COG0779: clustered with transcription termination protein NusA
COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like
COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP
COG1323: Predicted nucleotidyltransferase
COG1355, Predicted dioxygenase
COG1496: Uncharacterized conserved protein
COG1537: Predicted RNA-binding proteins
COG1559 protein YceG like
COG1565: Uncharacterized conserved protein
COG1720: Uncharacterized conserved protein
COG1821 family protein
COG1887: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
COG2047: Uncharacterized protein (ATP-grasp superfamily)
COG2071: predicted glutamine amidotransferases in hypothetical Actinobacterial gene cluster
COG2078: Uncharacterized ACR
COG2117: Predicted ATPase of the PP-loop superfamily
COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination
COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases
COG3269, Predicted RNA-binding protein, contains TRAM domain
COGs COG3146
Colanic acid biosynthesis acetyltransferase wcaB (EC 2.3.1.-)
Colanic acid biosynthesis acetyltransferase wcaF (EC 2.3.1.-)
Colanic acid biosynthesis glycosyl transferase wcaA
Colanic acid biosynthesis glycosyl transferase wcaC
Colanic acid biosynthesis glycosyl transferase wcaE
Colanic acid biosynthesis glycosyl transferase wcaL
Colanic acid biosynthsis UDP-glucose lipid carrier transferase wcaJ
Colanic acid biosysnthesis glycosyl transferase wcaI
Colanic acid biosysnthesis protein wcaK
Colanic acid capsular biosynthesis activation accesory protein RcsA, co-regulator with RcsB
Colanic acid polymerase wcaD
Cold-shock DEAD-box protein A
Cold shock protein CspA
Cold shock protein CspB
Cold shock protein CspC
Cold shock protein CspD
Cold shock protein CspE
Cold shock protein CspF
Cold shock protein CspG
Cold shock protein CspH
Cold shock protein CspI
Colicin I receptor precursor
Colicin V production protein
Collagen alpha 1(I) chain precursor
Collagen-binding adhesin
Collagen binding protein Cna
Collagen-like surface protein
ComF operon protein A, DNA transporter ATPase
ComF operon protein C
ComM-related protein
Competence/damage-inducible protein CinA
Competence/damage-inducible protein CinA family
Competence/damage-inducible protein CinA family, archaeal branch
Competence positive regulator ComW
Competence protein CoiA
Competence protein F
Competence protein PilO
Competence protein PilW
Competence-specific sigma factor ComX
Competence-stimulating peptide ABC transporter ATP-binding protein ComA
Competence-stimulating peptide ABC transporter permease protein ComB
Competence-stimulating peptide (CSP) precursor ComC
Complement component 1, Q subcomponent binding protein, mitochondrial precursor
Conjugative signal peptidase TrhF
Conjugative transfer entry exclusion protein TrbK
Conjugative transfer protein ELI_00880
Conjugative transfer protein ELI_04330
Conjugative transfer protein PSLT087
Conjugative transfer protein PSLT093
Conjugative transfer protein s043
Conjugative transfer protein TrbA
Conjugative transfer protein TrbB
Conjugative transfer protein TrbC
Conjugative transfer protein TrbD
Conjugative transfer protein TrbE
Conjugative transfer protein TrbF
Conjugative transfer protein TrbG
Conjugative transfer protein TrbH
Conjugative transfer protein TrbI
Conjugative transfer protein TrbJ
Conjugative transfer protein TrbL
Conjugative transfer protein TrbN
Conjugative transfer protein TrbO
Conjugative transfer protein TrbP (IncF TraX homolog)
Conjugative transposon protein TraA
Conjugative transposon protein TraB
Conjugative transposon protein TraC
Conjugative transposon protein TraD
Conjugative transposon protein TraE
Conjugative transposon protein TraF
Conjugative transposon protein TraG
Conjugative transposon protein TraH
Conjugative transposon protein TraI
Conjugative transposon protein TraJ
Conjugative transposon protein TraK
Conjugative transposon protein TraL
Conjugative transposon protein TraM
Conjugative transposon protein TraN
Conjugative transposon protein TraO
Conjugative transposon protein TraP
Conjugative transposon protein TraQ
Conjugative transposon transfer DNA helicase
Conserved ATP-binding protein YghS
Conserved domain protein in cluster with two glycosyl transferases
conserved hypothetical membrane protein, paralogue of Y20848
conserved hypothetical protein in cyt c oxidase gene clusters
Conserved hypothetical protein (perhaps related to histidine degradation)
Conserved hypothetical protein potentially related to ribose or hydroxymethylpyrimidine metabolism
Conserved hypothetical protein probably involved in assimilatory sulfate reduction
Conserved hypothetical protein probably involved in sulfate reduction
conserved hypothetical protein [Pyrococcus horikoshii]; COG2102: Predicted ATPases of PP-loop superfamily; IPR002761: Domain of unknown function DUF71
Conserved hypothetical TPR repeat protein, clustered with yghQ
Conserved oligomeric Golgi complex component 8
conserved protein associated with acetyl-CoA C-acyltransferase
Conserved protein LiaG in B. subtilis in Lia cluster
Conserved protein UPF0133 likely to be involved in DNA repair
conserved protein with predicted RNA binding PUA domain
Conserved protein YghR, with nucleoside triphosphate hydrolase domain
Conserved protein YghT, with nucleoside triphosphate hydrolase domain
Conserved protein YqhG
Conserved uncharacterized protein CreA
CooJ
CooT
copalyl diphosphate synthase (CPS) (ent-kaurene synthetase A)
CopG protein
Copper-binding periplasmic protein
Copper chaperone
Copper-containing nitrite reductase (EC 1.7.2.1)
Copper homeostasis protein CutE
Copper homeostasis protein CutF precursor
Copper ion binding protein
Copper metallochaperone, bacterial analog of Cox17 protein
Copper metallochaperone, cytochrome oxidase biogenesis protein Cox17
Copper resistance protein B
Copper resistance protein C precursor
Copper resistance protein D
Copper-sensing two-component system response regulator CpxR
Copper-sensing two-component system response regulator CusR
Copper sensory histidine kinase CpxA
Copper sensory histidine kinase CusS
Copper tolerance protein
Copper-translocating P-type ATPase (EC 3.6.3.4)
Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative 2
Core component CbiM of cobalt ECF transporter
corresponds to STY3070 from Accession AL513382: Salmonella typhi CT18
Corrinoid iron-sulfur protein (large subunit)
Corrinoid iron-sulfur protein (small subunit)
Coupling protein VirD4, ATPase required for T-DNA transfer
CpeR homolog, phycoerythrin linker-proteins region
CRISPR-associated helicase Cas3
CRISPR-associated helicase Cas3, protein
CRISPR-associated negative autoregulator
CRISPR-associated protein Cas1
CRISPR-associated protein Cas2
CRISPR-associated protein, Cas2
CRISPR-associated protein Cas7
CRISPR-associated protein, Csn1 family
CRISPR-associated protein, CT1133 family
CRISPR-associated protein, CT1134 family
CRISPR-associated protein, CT1972 family
CRISPR-associated protein, CT1973 family
CRISPR-associated protein, CT1974
CRISPR-associated protein, CT1975 family
CRISPR-associated protein, CT1976
CRISPR-associated protein, MJ0381 family
CRISPR-associated protein MTH1087
CRISPR-associated protein, SAG0894 family
CRISPR-associated protein, TM1800 family
CRISPR-associated protein, TM1801 family
CRISPR-associated protein, TM1802 family
CRISPR-associated protein, WS1616 family
CRISPR-associated RecB family exonuclease Cas4a
CRISPR-associated RecB family exonuclease Cas4b
Cro-like repressor [SA bacteriophages 11, Mu50B]
Cro-like repressor, superantigen-encoding pathogenicity islands SaPI
Crossover junction endodeoxyribonuclease ruvC (EC 3.1.22.4)
Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
crotonyl-CoA reductase
CrtT-methyltransferase-like protein
CrtV-methyltransferase-like protein
C-terminal binding protein 2
CTP-dependent archaeal riboflavin kinase
CTP:Inositol-1-phosphate cytidylyltransferase (2.7.7.-)
CTP synthase (EC 6.3.4.2)
Cu(I)-responsive transcriptional regulator
Curli production assembly/transport component CsgE
Curli production assembly/transport component CsgF
Curli production assembly/transport component CsgG
Cyanate ABC transporter, ATP-binding protein
Cyanate ABC transporter, permease protein
Cyanate ABC transporter, substrate binding protein
Cyanate hydratase (EC 4.2.1.104)
Cyanate transport protein cynX
Cyanobacteria-specific RpoD-like sigma factor, type-1
Cyanobacteria-specific RpoD-like sigma factor, type-10
Cyanobacteria-specific RpoD-like sigma factor, type-11
Cyanobacteria-specific RpoD-like sigma factor, type-12
Cyanobacteria-specific RpoD-like sigma factor, type-13
Cyanobacteria-specific RpoD-like sigma factor, type-14
Cyanobacteria-specific RpoD-like sigma factor, type-15
Cyanobacteria-specific RpoD-like sigma factor, type-16
Cyanobacteria-specific RpoD-like sigma factor, type-2
Cyanobacteria-specific RpoD-like sigma factor, type-3
Cyanobacteria-specific RpoD-like sigma factor, type-4
Cyanobacteria-specific RpoD-like sigma factor, type-5
Cyanobacteria-specific RpoD-like sigma factor, type-6
Cyanobacteria-specific RpoD-like sigma factor, type-7
Cyanobacteria-specific RpoD-like sigma factor, type-8
Cyanobacteria-specific RpoD-like sigma factor, type-9
Cyanoglobin
Cyanophycinase 2 (EC 3.4.15.6)
Cyanophycinase (EC 3.4.15.6)
Cyanophycinase (EC 3.4.15.6) dimer
Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30)
Cyanophycin synthase II
Cyclic AMP receptor protein
Cyclic beta-1,2-glucan modification transmembrane protein
Cyclic beta-1,2-glucan synthase (EC 2.4.1.-)
Cyclin G1
Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91)
Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)
cyclolysin-activating lysine-acyltransferase
cyclolysin secretion ATP-binding protein
cyclolysin secretion protein
Cyclomaltodextrin glucanotransferase (EC 2.4.1.19)
Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79)
Cyn operon transcriptional activator
CysQ, putative
Cys regulon transcriptional activator CysB
Cystathionine beta-lyase (EC 4.4.1.8)
Cystathionine beta-lyase, type II (EC 4.4.1.8)
Cystathionine beta-synthase (EC 4.2.1.22)
Cystathionine gamma-lyase (EC 4.4.1.1)
Cystathionine gamma-synthase (EC 2.5.1.48)
Cysteine desulfurase (EC 2.8.1.7)
Cysteine synthase A (EC 2.5.1.47)
Cysteine synthase B (EC 2.5.1.47)
Cysteine synthase (EC 2.5.1.47)
Cysteinyl-tRNA synthetase (EC 6.1.1.16)
Cysteinyl-tRNA synthetase (EC 6.1.1.16), mitochondrial
Cysteinyl-tRNA synthetase related protein
Cytidine deaminase (EC 3.5.4.5)
Cytidylate kinase (EC 2.7.4.14)
cytochrome b-5
Cytochrome b559 alpha chain (PsbE)
Cytochrome b559 beta chain (PsbF)
Cytochrome b6-f complex alternative Rieske iron sulfur protein PetC2
Cytochrome b6-f complex alternative Rieske iron sulfur protein PetC3
Cytochrome b6-f complex iron-sulfur subunit PetC1 (Rieske iron sulfur protein EC 1.10.99.1)
Cytochrome b6-f complex subunit, apocytochrome f
Cytochrome b6-f complex subunit, cytochrome b6
Cytochrome b6-f complex subunit IV (PetD)
Cytochrome b6-f complex subunit VIII (PetN)
Cytochrome b6-f complex subunit VII (PetM)
Cytochrome b6-f complex subunit VI (PetL)
Cytochrome b6-f complex subunit V (PetG)
Cytochrome C1 heme lyase CCHL (EC 4.4.1.17)
Cytochrome c2
cytochrome-c3 hydrogenase alpha chain
cytochrome-c3 hydrogenase delta chain
cytochrome-c3 hydrogenase gamma chain
Cytochrome c4
Cytochrome C550 (Soluble cytochrome C)
Cytochrome c551/c552
Cytochrome c551 NirM
Cytochrome c551 peroxidase (EC 1.11.1.5)
Cytochrome c552
Cytochrome c-552 precursor
Cytochrome c552 precursor (EC 1.7.2.2)
Cytochrome c553
Cytochrome c553-like
Cytochrome C553 (soluble cytochrome f)
Cytochrome c55X precursor NirC
Cytochrome cd1 nitrite reductase (EC:1.7.2.1)
Cytochrome C heme lyase CCHL (EC 4.4.1.17)
Cytochrome c heme lyase subunit CcmF
Cytochrome c heme lyase subunit CcmH
Cytochrome c heme lyase subunit CcmL
Cytochrome c in methylamine utilization cluster
Cytochrome c nitrite reductase, small subunit NrfH
Cytochrome c oxidase (B(O/a)3-type) chain I (EC 1.9.3.1)
Cytochrome c oxidase (B(O/a)3-type) chain II (EC 1.9.3.1)
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Cytochrome c oxidase polypeptide IIA (EC 1.9.3.1)
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
Cytochrome c oxidase polypeptide IV(EC 1.9.3.1)
Cytochrome c oxidase polypeptide Va, mitochondrial precursor (EC 1.9.3.1)
Cytochrome c oxidase polypeptide Vb, mitochondrial precursor (EC 1.9.3.1)
Cytochrome c oxidase polypeptide VIa-liver, mitochondrial precursor (EC 1.9.3.1)
Cytochrome c oxidase polypeptide VIIc, mitochondrial precursor (EC 1.9.3.1)
Cytochrome c oxidase subunit 2a (EC 1.9.3.1)
Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
Cytochrome c oxidase subunit CcoP (EC 1.9.3.1)
Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1)
Cytochrome c oxidase, subunit IV (EC 1.9.3.1)
cytochrome c subunit of flavocytochrome c sulfide dehydrogenase
Cytochrome c-type biogenesis protein, archaeal
Cytochrome c-type biogenesis protein CcdA (DsbD analog)
Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Cytochrome c-type biogenesis protein Ccs1/ResB
Cytochrome c-type biogenesis protein CcsA/ResC
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)
Cytochrome c-type biogenesis protein ResA
Cytochrome c-type heme lyase CCHL (EC 4.4.1.17)
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly
Cytochrome c-type protein NapC
Cytochrome c-type protein nrfB precursor
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
cytochrome d ubiquinol oxidase, subunit II-related protein
Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Cytochrome oxidase biogenesis protein Cox14, required for Cox1 assembly
Cytochrome oxidase biogenesis protein Cox16
Cytochrome oxidase biogenesis protein Cox18, required for translocation of Cox2
Cytochrome oxidase biogenesis protein Cox23
Cytochrome oxidase biogenesis protein Mba1
Cytochrome oxidase biogenesis protein Mss2, required for translocation of Cox2
Cytochrome oxidase biogenesis protein Mss51, required for maturation, translation of COX1 mRNA
Cytochrome oxidase biogenesis protein Oxa1, translocase of mitochondrial membrane
Cytochrome oxidase biogenesis protein Pet100, chaperone
Cytochrome oxidase biogenesis protein Pet117
Cytochrome oxidase biogenesis protein Pet191
Cytochrome oxidase biogenesis protein Pnt1, translocase of mt membrane
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion
cytochrome oxidase,subunit I (cydA-1)
cytochrome P450, putative / go_function: cytochrome P450 activity [goid 0015034]; go_function: oxygen binding [goid 0019825]
Cytolethal distending toxin subunit A
Cytolethal distending toxin subunit B
Cytolethal distending toxin subunit C
Cytolysin and hemolysin, HlyA, Pore-forming toxin
Cytoplasmic alpha-amylase (EC 3.2.1.1)
Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)
Cytoplasmic copper homeostasis protein cutC
Cytoplasmic protein YaiE
Cytoplasmic trehalase (EC 3.2.1.28)
Cytosine deaminase (EC 3.5.4.1)
Cytosine/purine/uracil/thiamine/allantoin permease family protein
Cytosol aminopeptidase PepA (EC 3.4.11.1)
cytosolic long-chain acyl-CoA thioester hydrolase family protein
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22)
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
D-alanine aminotransferase (EC 2.6.1.21)
D-alanine--D-alanine ligase A (EC 6.3.2.4)
D-alanine--D-alanine ligase B (EC 6.3.2.4)
D-alanine--D-alanine ligase (EC 6.3.2.4)
D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 2-2 (EC 6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 2 (EC 6.1.1.13)
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
D-alanyl transfer protein DltB
D-allose-6-phosphate isomerase (EC 5.3.1.-)
D-allose ABC transporter, ATPase component
D-allose ABC transporter, permease component
D-allose ABC transporter, substrate-binding component
D-allose kinase (EC 2.7.1.55)
D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-), row_id 1016
D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-), row_id 846
D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
D-amino acid dehydrogenase large subunit (EC 1.4.99.1)
D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
D-amino-acid oxidase (EC 1.4.3.3)
D-arabino-3-hexulose 6-phosphate formaldehyde lyase
dATP pyrophosphohydrolase NudB (EC 3.6.1.-)
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
D-beta-hydroxybutyrate permease
D,D-heptose 7-phosphate kinase
Deacetylases, including yeast histone deacetylase and acetoin utilization protein
Deblocking aminopeptidase
Deblocking aminopeptidase (EC 3.4.11.-)
decarboxylase
DedA family inner membrane protein YqjA
DedA protein
DedD protein
Defective in anther DEHISCENCE1
Degenerate integrase, superantigen-encoding pathogenicity islands SaPI
DegV family protein in cluster with TrmH family tRNA/rRNA methyltransferase YacO
dehydrogenase clustered with L-fuconate utilization genes
Dehydrogenase involved in DMSP breakdown
Dehydrosqualene desaturase (EC 1.14.99.-) (Diapophytoene desaturase) (4,4'-diapophytoene desaturase)
Dehydrosqualene synthase (EC 2.5.1.-)
Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21)
Delta 1-pyrroline-5-carboxylate dehydrogenase domain protein
Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8)
Delta-5 fatty acid desaturase (EC 1.14.19.3)
Delta-6 fatty acid desaturase (EC 1.14.19.3)
DeoR-type transcriptional regulator YihW
Deoxyadenosine kinase (EC 2.7.1.76)
Deoxycytidine kinase (EC 2.7.1.74)
Deoxycytidine triphosphate deaminase (EC 3.5.4.13)
Deoxycytidine triphosphate deaminase (EC 3.5.4.30) (dUMP-forming)
Deoxyguanosine kinase (EC 2.7.1.113)
Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1)
Deoxyhypusine synthase
Deoxynucleoside kinase (EC 2.7.1.145)
Deoxyribodipyrimidine photolyase/cryptochrome family protein
Deoxyribodipyrimidine photolyase (EC 4.1.99.3)
Deoxyribodipyrimidine photolyase, single-strand-specific
Deoxyribodipyrimidine photolyase, type II (EC 4.1.99.3)
Deoxyribonuclease TatD
Deoxyribonucleoside regulator DeoR (transcriptional repressor)
Deoxyribose operon repressor, DeoR family
Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23) [SA bacteriophages 11, Mu50B]
Dephospho-CoA kinase archaeal, predicted (EC 2.7.1.24)
Dephospho-CoA kinase (EC 2.7.1.24)
D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72)
Dethiobiotin synthetase (EC 6.3.3.3)
D-galactarate dehydratase (EC 4.2.1.42)
D-galactarate permease
D-galactonate regulator, IclR family
D-Galactonate repressor DgoR
D-galactonate transporter
D-glucarate permease
D-glutamyl-L-m-Dpm peptidase P45; Peptidoglycan lytic protein P45
D-glycerate 2-kinase (EC 2.7.1.-)
D-glycerate 3-kinase (EC 2.7.1.31), plant type
D-glycerate transporter (predicted)
D-glycero-beta-D-manno-heptose 7-phosphate kinase
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-)
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase
DHA-specific EI component
DHA-specific IIA component
DHA-specific phosphocarrier protein HPr
D-hydantoinase (EC 3.5.2.2)
Diacylglycerol kinase (EC 2.7.1.107)
Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)
Diaminobutyrate-pyruvate aminotransferase (EC 2.6.1.46)
Diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)
Diaminopimelate decarboxylase (EC 4.1.1.20)
Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Diaminopimelate epimerase (EC 5.1.1.7)
Dibenzothiophene desulfurization enzyme B
dicarboxylic acid transporter PcaT
Digeranylgeranylglycerophospholipid reductase
diglucosyldiacylglycerol synthase (LTA membrane anchor synthesis)
diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Dihydrodiol dehydrogenase (EC 1.3.1.56)
Dihydrodipicolinate reductase (EC 1.3.1.26)
Dihydrodipicolinate synthase (EC 4.2.1.52)
Dihydroflavonol-4-reductase (EC 1.1.1.219)
Dihydrofolate reductase (EC 1.5.1.3)
Dihydrofolate synthase (EC 6.3.2.12)
Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17)
Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex (EC 2.3.1.-)
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
Dihydrolipoamide dehydrogenase of acetoin dehydrogenase (EC 1.8.1.4)
Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4)
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Dihydroneopterin aldolase (EC 4.1.2.25)
Dihydroneopterin triphosphate epimerase
Dihydroneopterin triphosphate pyrophosphohydolase
Dihydroneopterin triphosphate pyrophosphohydolase type 2
Dihydroorotase (EC 3.5.2.3)
Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Dihydroorotate dehydrogenase (EC 1.3.3.1)
Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
Dihydropteridine reductase (EC 1.5.1.34)
Dihydropteroate synthase (EC 2.5.1.15)
Dihydropyrimidinase (EC 3.5.2.2)
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29)
Dihydroxyacetone kinase family protein
Dihydroxy-acid dehydratase (EC 4.2.1.9)
Dimeric dUTPase (EC 3.6.1.23)
Dimethyladenosine transferase (EC 2.1.1.-)
Dimethylallyltransferase (EC 2.5.1.1)
Dimethylamine:corrinoid methyltransferase
Dimethylamine methyltransferase corrinoid protein
Dimethylamine permease
Dimethylglycine N-methyltransferase
Dimethylsulfoniopropionate (DMSP) acyl CoA transferase DddD
Dimethylsulfoniopropionate (DSMP) lyase DddL
DinG family ATP-dependent helicase CPE1197
DinG family ATP-dependent helicase YoaA
DinG family ATP-dependent helicase YpvA
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)
Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
Dipeptidyl peptidase IV in 4-hydroxyproline catabolic gene cluster
Diphosphomevalonate decarboxylase (EC 4.1.1.33)
Dipicolinate synthase subunit A (EC 4.2.1.52)
Dipicolinate synthase subunit B
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
Distant homolog of E. coli HemX protein in Xanthomonadaceae
Distant similarity with leukotriene C4 synthase (microsomal glutathione S-transferase)
Distant similarity with phosphate transport system regulator
Distant similarity with viral glycoprotein gp160 of HIV type 1
Di/tripeptide permease DtpA
Di/tripeptide permease DtpB
Di/tripeptide permease DtpT
Di/tripeptide permease YbgH
Di/tripeptide permease YjdL
Di-/tripeptide transporter
Divinyl protochlorophyllide a 8-vinyl-reductase (EC 1.3.1.75)
D-lactate dehydrogenase (EC 1.1.1.28)
D-Lactate dehydrogenase (EC 1.1.2.5)
DltD protein
D-malic enzyme (EC 1.1.1.83)
D-mannonate oxidoreductase (EC 1.1.1.57)
D-mannose isomerase (EC 5.3.1.7)
DMSP breakdown glyoxylase protein
DMSP breakdown hydrolase protein
DMSP demethylase EC 2.1.2.10
DMSP demthylase transcriptional regulator
DNA-3-methyladenine glycosylase (EC 3.2.2.20)
DNA-3-methyladenine glycosylase II (EC 3.2.2.21)
DNA-binding capsular synthesis response regulator RcsB
DNA-binding domain of ModE
DNA-binding heavy metal response regulator
DNA-binding HTH domain in riboflavin kinase
DNA binding protein, FIG046916
DNA-binding protein Fis
DNA-binding protein HBsu
DNA binding protein HpkR
DNA-binding protein HU
DNA-binding protein HU-alpha
DNA-binding protein HU-beta
DNA-binding protein MTH1615
DNA binding protein [SA bacteriophages 11, Mu50B]
DNA binding protein starved cells-like peroxide resistance protein
DNA-binding response regulator KdpE
DNA-binding response regulator, LuxR family, near polyamine transporter
DNA-binding response regulator, OmpR family
DNA-binding response regulator PhoP2
Dna binding response regulator PrrA (RegA)
DNA-binding transcriptional activator of the allD operon
DNA-damage-inducible protein I
DNA-damage-inducible protein J
DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)
DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6), chloroplast
DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)
DNA-directed RNA polymerase beta subunit (EC 2.7.7.6), chloroplast
DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6), chloroplast
DNA-directed RNA polymerase delta (= beta'') subunit (EC 2.7.7.6)
DNA-directed RNA polymerase delta (= beta'') subunit (EC 2.7.7.6), chloroplast
DNA-directed RNA polymerase delta subunit (EC 2.7.7.6)
DNA-directed RNA polymerase gamma subunit (EC 2.7.7.6)
DNA-directed RNA polymerase gamma subunit (EC 2.7.7.6), chloroplast
DNA-directed RNA polymerase I 13.7 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase I 34 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase I 36 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase I 49 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase II 13.2 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase II 13.3 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase II 32 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase II 45 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase III 12.5 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase III 17 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase III 25 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase III 31 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase III 36 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase III 37/80 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase III 47 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase III 74 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)
DNA-directed RNA polymerase III second largest subunit (EC 2.7.7.6)
DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)
DNA-directed RNA polymerase II second largest subunit (EC 2.7.7.6)
DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)
DNA-directed RNA polymerase I second largest subunit (EC 2.7.7.6)
DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)
DNA-directed RNA polymerase omega subunit (EC 2.7.7.6), chloroplast
DNA-directed RNA polymerases I and III 16 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerases I and III 40 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerases I, II, and III 15 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide (EC 2.7.7.6)
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like
DNA-directed RNA polymerase subunit A (EC 2.7.7.6)
DNA-directed RNA polymerase subunit A' (EC 2.7.7.6)
DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)
DNA-directed RNA polymerase subunit B (EC 2.7.7.6)
DNA-directed RNA polymerase subunit B' (EC 2.7.7.6)
DNA-directed RNA polymerase subunit B'' (EC 2.7.7.6)
DNA-directed RNA polymerase subunit D (EC 2.7.7.6)
DNA-directed RNA polymerase subunit E''
DNA-directed RNA polymerase subunit E' (EC 2.7.7.6)
DNA-directed RNA polymerase subunit F (EC 2.7.7.6)
DNA-directed RNA polymerase subunit G (EC 2.7.7.6)
DNA-directed RNA polymerase subunit H (EC 2.7.7.6)
DNA-directed RNA polymerase subunit K (EC 2.7.7.6)
DNA-directed RNA polymerase subunit L (EC 2.7.7.6)
DNA-directed RNA polymerase subunit M (EC 2.7.7.6)
DNA-directed RNA polymerase subunit M-related protein
DNA-directed RNA polymerase subunit M-related protein 2
DNA-directed RNA polymerase subunit N (EC 2.7.7.6)
DNA-directed RNA polymerase subunit P (EC 2.7.7.6)
DNA double-strand break repair protein mre11
DNA double-strand break repair rad50 ATPase
DNA-entry nuclease (Competence-specific nuclease) (EC 3.1.30.-)
DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase
DNA gyrase subunit A (EC 5.99.1.3)
DNA gyrase subunit B (EC 5.99.1.3)
DNA helicase IV
DNA helicase (Rad25 homolog)
DNA helicase [SA bacteriophages 11, Mu50B]
DnaJ-class molecular chaperone CbpA
DnaJ-like protein DjlA
DNA ligase (EC 6.5.1.2)
DNA mismatch repair endonuclease MutH
DNA mismatch repair protein MutL
DNA mismatch repair protein MutS
DNA or RNA helicase of superfamily II
DNA polymerase I (EC 2.7.7.7)
DNA polymerase II (EC 2.7.7.7)
DNA polymerase III alpha subunit (EC 2.7.7.7)
DNA polymerase III beta subunit (EC 2.7.7.7)
DNA polymerase III chi subunit (EC 2.7.7.7)
DNA polymerase III delta prime subunit (EC 2.7.7.7)
DNA polymerase III delta subunit (EC 2.7.7.7)
DNA polymerase III epsilon subunit (EC 2.7.7.7)
DNA polymerase III psi subunit (EC 2.7.7.7)
DNA polymerase III subunits gamma and Tau (EC 2.7.7.7)
DNA polymerase III theta subunit (EC 2.7.7.7)
DNA polymerase IV (EC 2.7.7.7)
DNA polymerase sliding clamp protein PCNA
DNA polymerase X family
DNA primase (EC 2.7.7.-)
DNA primase large subunit (EC 2.7.7.-)
DNA primase small subunit (EC 2.7.7.-)
DNA recombination and repair protein RecF
DNA recombination and repair protein RecO
DNA recombination-dependent growth factor C
DNA recombination protein RmuC
DNA repair exonuclease family protein YhaO
DNA repair protein RadA
DNA repair protein RadC
DNA repair protein RecN
DNA replication helicase protein MCM
DNA replication intiation control protein YabA
DNA replication protein dnaC
DNA replication terminus site-binding protein
DNA reverse gyrase (EC 5.99.1.-)
DNA sulfur modification protein DndB
DNA sulfur modification protein DndD
DNA sulfur modification protein DndE
DNA topoisomerase IB (poxvirus type) (EC 5.99.1.2)
DNA topoisomerase I (EC 5.99.1.2)
DNA topoisomerase I, eukaryotic-type (EC 5.99.1.2)
DNA topoisomerase II (EC 5.99.1.3)
DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2)
DNA topoisomerase III (EC 5.99.1.2)
DNA topoisomerase V
DNA topoisomerase VI subunit A (EC 5.99.1.3)
DNA topoisomerase VI subunit B (EC 5.99.1.3)
DNA transformation protein TfoX
D-Ornithine 4,5-aminomutase E subunit (EC 5.4.3.5)
D-Ornithine 4,5-aminomutase S subunit (EC 5.4.3.5)
DoxX family protein
D-proline reductase, 23 kDa subunit (EC 1.21.4.1)
D-proline reductase, 26 kDa subunit (EC 1.21.4.1)
D-proline reductase, 45 kDa subunit (EC 1.21.4.1)
Drug/metabolite transporter (DMT) superfamily protein
D-serine/D-alanine/glycine transporter
D-serine dehydratase (EC 4.3.1.18)
D-serine dehydratase transcriptional activator
D-serine permease DsdX
D-specific D-2-hydroxyacid dehydrogenase ddh homolog (EC 1.1.1.28)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)
dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)
DTDP-4-keto-6-deoxy-D-glucose 4-reductase
dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)
dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL
dTDP-rhamnosyl transferase RfbF (EC 2.-.-.-)
D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)
DUF1850 domain-containing protein
DUF447 family protein
duf556 family protein
Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter
Duplicated ATPase component glr2054 of energizing module of predicted ECF transporter
Duplicated ATPase component MTH454 of energizing module of predicted ECF transporter
Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
Duplicated ATPase component of energizing module of predicted ECF transporter in Mycobacteria
Duplicated ATPase component of energizing module of predicted tryptophan ECF transporter
Duplicated ATPase component of energizing module of riboflavin ECF transporter
Duplicated ATPase component SCO2324 of energizing module of predicted cobalamin ECF transporter
Duplicated ATPase component SS1136 of energizing module of predicted ECF transporter
Duplicated ATPase component TTE1589 of energizing module of predicted methylthioadenosine ECF transporter
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
D-xylose 1-dehydrogenase (EC 1.1.1.175)
D-xylose proton-symporter XylE
D-xylose proton-symporter XylT
D-xylose-specific 1-epimerase (mutarotase)
D-xylose transport ATP-binding protein xylG
ECF family sigma factor
ECF sigma factor
Ectoine Hydroxylase (EC 1.17.-.-)
Efflux pump Lde
ElaA protein
Elastin binding protein EbpS
Electron transfer flavoprotein, alpha subunit
Electron transfer flavoprotein, alpha subunit FixB
Electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein, beta subunit FixA
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Electron transport complex protein RnfA
Electron transport complex protein RnfB
Electron transport complex protein RnfC
Electron transport complex protein RnfD
Electron transport complex protein RnfE
Electron transport complex protein RnfG
Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)
Endo-alpha-mannosidase
Endo-beta-1,3-1,4 glucanase (Licheninase) (EC 3.2.1.73)
Endolysin, L-alanyl-D-glutamate peptidase (EC 3.4.-.-) [Bacteriophage A118]
Endonuclease III (EC 4.2.99.18)
Endonuclease IV (EC 3.1.21.2)
Endonuclease V (EC 3.1.21.7)
Endonuclease VIII
Endopeptidase spore protease Gpr (EC 3.4.24.78)
Endoribonuclease L-PSP
Energy conserving hydrogenase Eha associated gene 2
Energy conserving hydrogenase Eha associated polyferredoxin
Energy conserving hydrogenase Eha associated protein (protein R)
Energy conserving hydrogenase Eha associated protein (protein S)
Energy conserving hydrogenase Eha associated protein, ribokinase homolog (protein T)
Energy conserving hydrogenase Eha-associated regulator
Energy conserving hydrogenase Eha ferredoxin (protein P2)
Energy conserving hydrogenase Eha large subunit homolog (protein O)
Energy conserving hydrogenase Eha polyferredoxin domain (protein P')
Energy conserving hydrogenase Eha polyferredoxin (protein P)
Energy conserving hydrogenase Eha polyferredoxin (protein P3)
Energy conserving hydrogenase Eha polyferredoxin (protein P4)
Energy conserving hydrogenase Eha protein M
Energy conserving hydrogenase Eha protein M2
Energy conserving hydrogenase Eha proton-sodium antiporter homolog protein H
Energy conserving hydrogenase Eha small subunit homolog (protein N)
Energy conserving hydrogenase Eha transmembrane protein A
Energy conserving hydrogenase Eha transmembrane protein B
Energy conserving hydrogenase Eha transmembrane protein C
Energy conserving hydrogenase Eha transmembrane protein D
Energy conserving hydrogenase Eha transmembrane protein E
Energy conserving hydrogenase Eha transmembrane protein F
Energy conserving hydrogenase Eha transmembrane protein G
Energy conserving hydrogenase Eha transmembrane protein I
Energy conserving hydrogenase Eha transmembrane protein I2
Energy conserving hydrogenase Eha transmembrane protein I3
Energy conserving hydrogenase Eha transmembrane protein J
Energy conserving hydrogenase Eha transmembrane protein K
Energy conserving hydrogenase Eha transmembrane protein K2
Energy conserving hydrogenase Eha transmembrane protein K3
Energy conserving hydrogenase Eha transmembrane protein L
Energy conserving hydrogenase Ehb anchor subunit F
Energy conserving hydrogenase Ehb ferredoxin-containing protein L
Energy conserving hydrogenase Ehb integral membrane protein O
Energy conserving hydrogenase Ehb large subunit (protein N)
Energy conserving hydrogenase Ehb polyferredoxin (protein K)
Energy conserving hydrogenase Ehb protein A
Energy conserving hydrogenase Ehb protein B
Energy conserving hydrogenase Ehb protein C
Energy conserving hydrogenase Ehb protein D
Energy conserving hydrogenase Ehb protein G
Energy conserving hydrogenase Ehb protein H
Energy conserving hydrogenase Ehb protein I
Energy conserving hydrogenase Ehb protein J
Energy conserving hydrogenase Ehb protein P
Energy conserving hydrogenase Ehb protein Q
Energy conserving hydrogenase Ehb small subunit (protein M)
Energy conserving hydrogenase Ehb transmembrane protein E
Energy-conserving hydrogenase (ferredoxin), subunit A
Energy-conserving hydrogenase (ferredoxin), subunit B
Energy-conserving hydrogenase (ferredoxin), subunit C
Energy-conserving hydrogenase (ferredoxin), subunit D
Energy-conserving hydrogenase (ferredoxin), subunit E
Energy-conserving hydrogenase (ferredoxin), subunit F
Enolase (EC 4.2.1.11)
Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10)
Enoyl-CoA hydratase [branched-chain amino acid degradation] (EC 4.2.1.17)
Enoyl-CoA hydratase (EC 4.2.1.17)
Enoyl-CoA hydratase (EC 4.2.1.17), anthrose biosynthesis
Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17)
Enoyl-CoA hydratase/isomerase family protein, may be related to NAD-dependent histone deacetylation
enoyl-CoA hydratase, R-specific
Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Enterobactin receptor IrgA
Enterobactin receptor VctA
Enterobactin synthetase component F (EC 2.7.7.-)
Enterochelin uptake ATP-binding protein
Enterochelin uptake periplasmic binding protein
Enterochelin uptake permease CeuB
Enterochelin uptake permease CeuC
Enterotoxin, A subunit (NAD(+)--diphthamide ADP- ribosyltransferase) (EC 2.4.2.36)
Enterotoxin, B subunit
Envelope stress response regulator BaeR
Envelope stress sensory histidine kinase BaeS
Epi-inositol hydrolase (EC 3.7.1.-)
Epimerase KguE
Error-prone repair protein UmuC
Error-prone repair protein UmuD (EC 3.4.21.-)
Erythritol kinase EryA (EC 2.7.1.27)
Erythritol phosphate dehydrogenase EryB
Erythritol transcriptional regulator EryD
Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
EsaC protein within ESAT-6 gene cluster (S.aureus type)
ESAT-6/Esx family secreted protein EsxA/YukE
ESAT-6/Esx family secreted protein EsxB
Estrogen sulfotransferase (EC 2.8.2.4)
Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)
Ethanolamine ammonia-lyase light chain (EC 4.3.1.7)
Ethanolamine operon regulatory protein
Ethanolamine permease
Ethanolamine sensory transduction histidine kinase
Ethanolamine two-component response regulator
Ethanolamine utilization polyhedral-body-like protein EutK
Ethanolamine utilization polyhedral-body-like protein EutL
Ethanolamine utilization polyhedral-body-like protein EutM
Ethanolamine utilization polyhedral-body-like protein EutN
Ethanolamine utilization polyhedral-body-like protein EutS
Ethanolamine utilization protein EutA
Ethanolamine utilization protein EutG
Ethanolamine utilization protein EutJ
Ethanolamine utilization protein EutP
Ethanolamine utilization protein EutQ
Ethanolamine utilization protein similar to PduA/PduJ
Ethanolamine utilization protein similar to PduL
Ethanolamine utilization protein similar to PduT
Ethanolamine utilization protein similar to PduU
Ethanolamine utilization protein similar to PduV
Ethylbenzene dehydrogenase alpha subunit (EC 1.17.99.2)
Ethylbenzene dehydrogenase beta subunit (EC 1.17.99.2)
Ethylbenzene dehydrogenase delta subunit (EC 1.17.99.2)
Ethylbenzene dehydrogenase gamma subunit (EC 1.17.99.2)
Eukaryotic peptide chain release factor GTP-binding subunit
Eukaryotic peptide chain release factor subunit 1
Eukaryotic translation initiation factor 2 alpha subunit
Eukaryotic translation initiation factor 2 beta subunit
Eukaryotic translation initiation factor 2 gamma subunit
Eukaryotic translation initiation factor 3 110 kDa subunit
Eukaryotic translation initiation factor 3 135 kDa subunit
Eukaryotic translation initiation factor 3 30 kDa subunit
Eukaryotic translation initiation factor 3 39 kDa subunit
Eukaryotic translation initiation factor 3 90 kDa subunit
Eukaryotic translation initiation factor 3 93 kDa subunit
Eukaryotic translation initiation factor 3 RNA-binding subunit
Eukaryotic translation initiation factor 4A
Eukaryotic translation initiation factor 4B
Eukaryotic translation initiation factor 4E
Eukaryotic translation initiation factor 4H
Eukaryotic translation initiation factor 5
Eukaryotic translation initiation factor 5A
Eukaryotic translation initiation factor 6
Eukaryotic-type low-affinity urea transporter
Evolved beta-D-galactosidase, alpha subunit
Evolved beta-D-galactosidase, beta subunit
Evolved beta-D-galactosidase transcriptional repressor
Excinuclease ABC subunit A
Excinuclease ABC subunit A, dimeric form
Excinuclease ABC subunit A paralog in greater Bacteroides group
Excinuclease ABC subunit A paralog of unknown function
Excinuclease ABC subunit B
Excinuclease ABC subunit C
Excinuclease cho (excinuclease ABC alternative C subunit)
Excisionase [SA bacteriophages 11, Mu50B]
Exodeoxyribonuclease I (EC 3.1.11.1)
Exodeoxyribonuclease III (EC 3.1.11.2)
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)
Exodeoxyribonuclease V beta chain (EC 3.1.11.5)
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)
Exonuclease SbcC
Exonuclease SbcD
Exopolyphosphatase (EC 3.6.1.11)
Exopolysaccharide biosynthesis glycosyltransferase EpsF (EC 2.4.1.-)
exopolysaccharide biosynthesis protein EpsF, putative
Exopolysaccharide biosynthesis transcriptional activator EpsA
Exopolysaccharide biosynthesis transcription antiterminator, LytR family
Exopolysaccharide production protein ExoF precursor
Exopolysaccharide production protein ExoQ
Exopolysaccharide production protein ExoZ
Exoribonuclease II (EC 3.1.13.1)
Export ABC transporter ATP-binding protein
Export ABC transporter permease
Expressed protein possibly involved in photorespiration
Extracellular adherence protein of broad specificity Eap/Map
Extracellular deoxyribonuclease Dns (EC 3.1.21.-)
Extracellular deoxyribonuclease Xds
Extracellular ECM and plasma binding protein Emp
Extracellular fibrinogen-binding protein Efb
Extracellular solute binding protein ScrB
extradiol dioxygenase large subunit
F420-dependent methylenetetrahydromethanopterin dehydrogenase (EC 1.5.99.9)
F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase (EC 1.5.99.11)
F420H2:quinone oxidoreductase, 11.2 kDa subunit, putative
F420H2:quinone oxidoreductase, 39 kDa subunit, putative
F420-nonreducing hydrogenase (vhtD-1)
FAD-binding protein, inferred for ABFAE pathway
FAD-dependent monooxygenase PhzS
FAD-dependent pyridine nucleotide-disulphide oxidoreductase, GBAA2537 homolog
FadE30
Family 13 glycosyl hydrolase, row 724
Farnesyl-diphosphate farnesyltransferase (EC 2.5.1.21)
Farnsylgeranyl pyrophosphate synthetase (EC 2.5.1.-)
Fatty-acid amide hydrolase (EC 3.1.-.-)
Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1)
Fatty acid desaturase (EC 1.14.19.3)
Fatty acid elongase 1
Fatty acid elongase-like protein
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
Fe2+/Zn2+ uptake regulation proteins
Fe-containing alcohol dehydrogenase
[Fe] hydrogenase gamma (EC 1.12.7.2)
[Fe] hydrogenase, HymA subunit, putative
[Fe] hydrogenase, HymB subunit, putative
[Fe] hydrogenase, HymD subunit, putative
FemA, factor essential for methicillin resistance
FemB, factor involved in methicillin resistance
FemC, factor involved in methicillin resistance
FemD, factor involved in methicillin resistance
FeMo cofactor biosynthesis protein NifB
Ferredoxin
Ferredoxin, 2Fe-2S
Ferredoxin 3 fused to uncharacterized domain
Ferredoxin component of carbazole 1,9a-dioxygenase
Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)
Ferredoxin-like protein
Ferredoxin-like protein FixX
Ferredoxin-like protein involved in electron transfer
Ferredoxin-like protein YdiT
Ferredoxin-like protein YgcO
Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)
Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
Ferredoxin-NADP(+) reductase (EC 1.18.1.2)
Ferredoxin--nitrite reductase (EC 1.7.7.1)
Ferredoxin reductase
Ferredoxin reductase component of carbazole 1,9a-dioxygenase
Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)
Ferredoxin--sulfite reductase, bacillial type (EC 1.8.7.1)
Ferredoxin--sulfite reductase (EC 1.8.7.1)
Ferredoxin-type protein NapF (periplasmic nitrate reductase)
Ferredoxin-type protein NapG (periplasmic nitrate reductase)
Ferric aerobactin ABC transporter, ATPase component
Ferric aerobactin ABC transporter, periplasmic substrate binding protein
Ferric aerobactin ABC transporter, permease component
Ferric enterobactin transport ATP-binding protein fepC (TC 3.A.1.14.2)
Ferric enterobactin transport system permease protein fepD (TC 3.A.1.14.2)
Ferric enterobactin transport system permease protein fepG (TC 3.A.1.14.2)
Ferrichrome ABC transporter (ATP binding subunit) PvuE
Ferrichrome ABC transporter (permease) PvuC
Ferrichrome ABC transporter (permease) PvuD
Ferrichrome-binding periplasmic protein precursor in superantigen-encoding pathogenicity islands SaPI
Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
Ferrichrome-iron receptor
Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
Ferrichrome transport system permease protein fhuB (TC 3.A.1.14.3)
Ferric iron ABC transporter, ATP-binding protein
Ferric iron ABC transporter, iron-binding protein
Ferric iron ABC transporter, permease protein
Ferric receptor CfrA
Ferric reductase (1.6.99.14)
Ferric siderophore receptor PsuA
Ferric siderophore transport system, biopolymer transport protein ExbB
Ferric siderophore transport system, biopolymer transport protein ExbD
Ferric siderophore transport system, periplasmic binding protein TonB
Ferric uptake regulation protein
Ferric uptake regulation protein FUR
Ferric vibriobactin, enterobactin transport system, ATP-binding protein (TC 3.A.1.14.6)
Ferric vibriobactin, enterobactin transport system, ATP-binding protein ViuC (TC 3.A.1.14.6)
Ferric vibriobactin, enterobactin transport system, permease protein VctD (TC 3.A.1.14.6)
Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6)
Ferric vibriobactin, enterobactin transport system, permease protein ViuD (TC 3.A.1.14.6)
Ferric vibriobactin, enterobactin transport system, permease protein ViuG (TC 3.A.1.14.6)
Ferric vibriobactin, enterobactin transport system, substrate-binding protein VctP (TC 3.A.1.14.6)
Ferric vibriobactin, enterobactin transport system, substrate-binding protein ViuP (TC 3.A.1.14.6)
Ferric vibriobactin receptor ViuA
Ferric vulnibactin receptor VuuA
Ferrienterobactin-binding periplasmic protein fepB (TC 3.A.1.14.2)
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)
Ferrous iron transport periplasmic protein EfeO
Ferrous iron transport permease EfeU
Ferrous iron transport permease EfeU, N-terminal extended
Ferrous iron transport peroxidase EfeB
Ferrous iron transport protein A
Ferrous iron transport protein A, putative
Ferrous iron transport protein B
Ferrous iron transport protein C
Ferroxidase (EC 1.16.3.1)
Ferulate-5-hydroxylase
Feruloyl-CoA synthetase
Fe-S-cluster-containing hydrogenase components 1
Fe-S-cluster-containing hydrogenase components 2
Fe-S OXIDOREDUCTASE (1.8.-.-) Wyeosine biosynthesis
Fe-S oxidoreductase-like protein in Rubrerythrin cluster
Fibrillarin
Fibrinogen alpha chain
Fibrinogen-binding protein
Fibronectin-binding protein
Fibronectin-binding protein 2
Fibronectin binding protein FnbA
Fibronectin binding protein FnbB
Fibronectin/fibrinogen-binding protein
FIG000859: hypothetical protein
FIG000906: Predicted Permease
FIG000988: Predicted permease
FIG001014_Response regulator of the LytR/AlgR family
FIG001081: Putative alpha helix protein
FIG001412: Putative protease
FIG001421: Putative protease
FIG001553: Hydrolase, HAD subfamily IIIA
FIG001568: Amine oxidase, flavin-containing
FIG001571: Hypothetical protein
FIG001583: hypothetical protein, contains S4-like RNA binding domain
FIG001590: Putative conserved exported protein precursor
FIG001621: Zinc protease
FIG001674: hypothetical protein
FIG001721: Predicted N6-adenine-specific DNA methylase
FIG001802: Putative alkaline-shock protein
FIG001957: putative hydrolase
FIG001960: FtsZ-interacting protein related to cell division
FIG002076: hypothetical protein
FIG002082: Protein sirB2
FIG002208: Acetyltransferase (EC 2.3.1.-)
FIG002344: Hydrolase (HAD superfamily)
FIG002379: metal-dependent hydrolase
FIG002625: Ribosomal large subunit pseudouridine synthase E (EC 5.4.99.-)
FIG002708: Protein SirB1
FIG002776: hypothetical protein
FIG002842: hypothetical protein
FIG002903: a protein of unknown function perhaps involved in purine metabolism
FIG002958: hypothetical protein
FIG002961: Putative lipid carrier protein
FIG002994: Putative transcriptional regulator
FIG003276: zinc-binding protein
FIG003307: hypothetical protein
FIG003437: hypothetical with DnaJ-like domain
FIG003492: Threonine dehydrogenase and related Zn-dependent dehydrogenases
FIG003568: hypothetical protein
FIG003573: hypothetical protein
FIG003603: membrane protein, putative
FIG003620: Proteophosphoglycan precursor (Fragment)
FIG003879: Predicted amidohydrolase
FIG003955: protein of unknown function
FIG004454: RNA binding protein
FIG004684: SpoVR-like protein
FIG005069: Hypothetical protein
FIG005080: Possible exported protein
FIG005189: putative transferase clustered with tellurite resistance proteins TehA/TehB
FIG005453: Putative DeoR-family transcriptional regulator
FIG005495: hypothetical protein
FIG005666: putative helicase
FIG005686: hypothetical protein
FIG006126: DNA helicase, restriction/modification system component YeeB
FIG006442: Integral membrane protein
FIG007042: hypothetical protein
FIG007079: UPF0348 protein family
FIG009210: peptidase, M16 family
FIG009439: Cytosolic protein containing multiple CBS domains
FIG013354: hypothetical protein
FIG013736: cell division protein (putative)
FIG014461: putative endonuclease containing a URI domain
FIG015245: Methyltransferase
FIG015287: Zinc protease
FIG017807: peptidase, M16 family
FIG017823: ATPase, MoxR family
FIG018583: protein of unknown function
FIG019327: Probable conserved membrane protein
FIG019733: possible DNA-binding protein
FIG025803: D,D-carboxypeptidase family protein
FIG026291: Hypothetical protein
FIG030745: polysaccharide deacetylase, putative
FIG033155: Hypothetical protein
FIG033545: PE-PGRS family protein
FIG033680: Hypothetical protein
FIG034376: Hypothetical protein
FIG034458: Plasmid related protein
FIG034602: Probable transmembrane protein
FIG035155: Enoyl-CoA hydratase (EC 4.2.1.17)
FIG035830: Two-component system regulatory protein
FIG036757: Plasmid-related protein
FIG037127: Two-component system sensor protein
FIG037995: Hypothetical protein
FIG041301: Hypothetical protein
FIG042594: DUF1550 domain-containing protein
FIG042796: Hypothetical protein
FIG045085: Hypothetical protein
FIG045374: Type II restriction enzyme, methylase subunit YeeA
FIG046709: Hypothetical protein
FIG048626: Hypothetical protein
FIG049434: Periplasmic protein TonB, links inner and outer membranes
FIG052052: HIT family protein
FIG062860: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
FIG068798: Hypothetical protein
FIG076210: Hypothetical protein
FIG076676: Hypothetical protein
FIG078367: Inositol monophosphatase family protein
FIG081201: hypothetical protein
FIG086212: Putative lipoprotein
FIG086515: Hypothetical protein
FIG097052: Sugar transporter
FIG129514: hypothetical protein
FIG129662: hypothetical protein
FIG132708: a glutathione-dependent thiol reductase
FIG134348: essential endopeptidase
FIG137276: Maf/YceF/YhdE family protein
FIG137478: Hypothetical protein
FIG137619: Putative proteasome component
FIG139612: Possible conserved membrane protein
FIG143828: Hypothetical protein YbgA
FIG145533: Ubiquinone/menaquinone biosynthesis methyltransferase UbiE/ COQ5 (EC 2.1.1.-)
FIG146085: Phosphoesterase, DHH family protein
FIG146397: peptidase, M16 family
FIG146452: Zinc protease
FIG146458: peptidase, M16 family
FIGfam003972: membrane protein
FIGfam005179
FIGfam009438: Two-component system DNA-binding response regulator
FIGfam010146: Two component system histidine kinase
FIGfam010717
FIGfam012970: transmembrane protein
FIGfam013899: ABC transporter substrate-binding protein
FIGfam014588: Predicted regulator of CFA/I fimbriae
FIGfam020323
FIGfam050825
FIGfam110555
FIGfam135315: Iojap-related protein
FIGfam138462: Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase related enzyme
Filamentous haemagglutinin domain protein
Fimbriae-like adhesin FimI
Fimbriae-like adhesin SfmA
Fimbriae-like adhesin SfmH
Fimbriae-like periplasmic protein SfmF
Fimbrial assembly protein FimB
Fimbrial periplasmic chaperone SfmC
Firmicutes ribosomal L7Ae family protein
FixA protein
FixB protein
FixO3 cytochrome-c oxidase subunit
FKBP-type peptidyl-prolyl cis-trans isomerase fklB (EC 5.2.1.8)
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)
FKBP-type peptidyl-prolyl cis-trans isomerase slpA (EC 5.2.1.8)
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)
Flagellar assembly protein fliH
Flagellar basal-body P-ring formation protein flgA
Flagellar basal-body rod modification protein FlgD
Flagellar basal-body rod protein flgB
Flagellar basal-body rod protein flgC
Flagellar basal-body rod protein flgF
Flagellar basal-body rod protein flgG
Flagellar biosynthesis protein flgN
Flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhB
Flagellar biosynthesis protein FlhF
Flagellar biosynthesis protein fliC
Flagellar biosynthesis protein fliL
Flagellar biosynthesis protein fliO
Flagellar biosynthesis protein fliP
Flagellar biosynthesis protein fliQ
Flagellar biosynthesis protein FliR
Flagellar biosynthesis protein fliS
Flagellar biosynthesis protein fliT
Flagellar biosynthesis protein fliZ
Flagella-related protein C flaC
Flagella-related protein DE flaD/flaE
Flagella-related protein D flaD
Flagella-related protein E flaE
Flagella-related protein F flaF
Flagella-related protein G flaG
Flagella-related protein H flaH
Flagella-related protein I flaI
Flagella-related protein J flaJ
Flagellar hook-associated protein 3
Flagellar hook-associated protein flgK
Flagellar hook-associated protein flgL
Flagellar hook-associated protein fliD
Flagellar hook-basal body complex protein fliE
Flagellar hook-length control protein fliK
Flagellar hook protein flgE
Flagellar hook subunit protein
Flagellar L-ring protein FlgH
Flagellar motor rotation protein MotA
Flagellar motor rotation protein MotB
Flagellar motor switch protein fliG
Flagellar motor switch protein FliM
Flagellar motor switch protein FliN
Flagellar M-ring protein fliF
Flagellar P-ring protein flgI
Flagellar protein flbB
Flagellar protein flbD
Flagellar protein flgJ [peptidoglycan hydrolase] (EC 3.2.1.-)
Flagellar protein flhE
Flagellar protein fliJ
Flagellar regulatory protein FleQ
Flagellar regulon repressor RtsB
Flagellar sensor histidine kinase fleS
Flagellar sensory histidine kinase FlgS
Flagellar synthesis regulator FleN
Flagellar trans-acting factor fliX
Flagellar transcriptional activator flhC
Flagellar transcriptional activator flhD
Flagellin
Flagellin A
Flagellin A1 flaA1
Flagellin A2 flaA2
Flagellin B
Flagellin B1 flaB1
Flagellin B2 flaB2
Flagellin B3 flaB3
Flagellin B flaB
Flagellin C
Flagellin protein FlaA
Flagellin protein flaB
Flagellin protein flaC
Flagellin protein flaD
Flagellin protein flaE
Flagellin protein flaF
Flagellin protein flaG
Flagellum-specific ATP synthase FliI
Flap structure-specific endonuclease (EC 3.-.-.-)
Flavanone-3-hydroxylase (EC 1.14.11.9)
Flavanone-3-hydroxylase (EC 1.14.13.21)
Flavocytochrome c flavin subunit
Flavocytochrome c heme subunit
Flavodoxin
Flavodoxin 1
Flavodoxin 2
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Flavohemoprotein
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
flavonoid 7-O-methyltransferase (EC 2.1.1.75)
Flavonol 3-sulfotransferase (EC 2.8.2.25)
Flavoprotein MioC
Flp pilus assembly membrane protein TadE
Flp pilus assembly protein CpaD
Flp pilus assembly protein, pilin Flp
Flp pilus assembly protein RcpB
Flp pilus assembly protein RcpC/CpaB
Flp pilus assembly protein TadB
Flp pilus assembly protein TadD, contains TPR repeat
Flp pilus assembly surface protein TadF, ATP/GTP-binding motif
FmhA protein of FemAB family
FmhB protein of FemAB family involved in peptidoglycan interpeptide biosynthesis
FmhC protein of FemAB family
FMN adenylyltransferase (EC 2.7.7.2)
FMN adenylyltransferase, type 2 eukaryotic (EC 2.7.7.2)
FMN reductase (EC 1.5.1.29)
FmtA protein involved in methicillin resistance
FmtB (Mrp) protein involved in methicillin resistance and cell wall biosynthesis
FmtC (MrpF) protein involved in methicillin resistance
FO biosynthesis ArfB
Folate biosynthesis, PTPS-III
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress
Folate transporter 1
Folate transporter 3
Foldase protein PrsA precursor (EC 5.2.1.8)
FolM Alternative dihydrofolate reductase 1
Folylpolyglutamate synthase (EC 6.3.2.17)
Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66)
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
Formate dehydrogenase alpha subunit (EC 1.2.1.2)
Formate dehydrogenase beta subunit (EC 1.2.1.2)
Formate dehydrogenase beta subunit (EC 1.2.1.43)
Formate dehydrogenase chain D (EC 1.2.1.2)
formate dehydrogenase formation protein FdhE
Formate dehydrogenase H (EC 1.2.1.2)
Formate dehydrogenase H (EC 1.2.1.2); selenocysteine-containing
Formate dehydrogenase N alpha subunit (EC 1.2.1.2)
Formate dehydrogenase N alpha subunit (EC 1.2.1.2); selenocysteine-containing
Formate dehydrogenase N beta subunit (EC 1.2.1.2)
Formate dehydrogenase N gamma subunit (EC 1.2.1.2)
Formate dehydrogenase O alpha subunit (EC 1.2.1.2)
Formate dehydrogenase O beta subunit (EC 1.2.1.2)
Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)
Formate dehydrogenase O gamma subunit (EC 1.2.1.2)
Formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2)
Formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Formate dehydrogenase O putative subunit
Formate dehydrogenase putative subunit (EC 1.2.1.2)
Formate dehydrogenase related protein
Formate efflux transporter (TC 2.A.44 family)
Formate hydrogenlyase hypothetical subunit
Formate hydrogenlyase regulatory protein HycA
Formate hydrogenlyase subunit 2
Formate hydrogenlyase subunit 3
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
Formate hydrogenlyase subunit 4
Formate hydrogenlyase subunit 5
Formate hydrogenlyase subunit 6
Formate hydrogenlyase subunit 7
Formate hydrogenlyase transcriptional activator
Formate--tetrahydrofolate ligase (EC 6.3.4.3)
Formate-tetrahydrofolate ligase (EC 6.3.4.3)
Formiminoglutamase (EC 3.5.3.8)
Formiminoglutamic iminohydrolase (EC 3.5.3.13)
Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)
Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9)
Formylmethanofuran dehydrogenase (molybdenum) operon gene E
Formylmethanofuran dehydrogenase (molybdenum) operon gene F (polyferredoxin)
Formylmethanofuran dehydrogenase (molybdenum) operon gene G
Formylmethanofuran dehydrogenase (molybdenum) subunit B (EC 1.2.99.5)
Formylmethanofuran dehydrogenase (molybdenum) subunit C (EC 1.2.99.5)
Formylmethanofuran dehydrogenase (molybdenum) subunit D (EC 1.2.99.5)
Formylmethanofuran dehydrogenase subunit A (EC 1.2.99.5)
Formylmethanofuran dehydrogenase subunit B (EC 1.2.99.5)
Formylmethanofuran dehydrogenase subunit C (EC 1.2.99.5)
Formylmethanofuran dehydrogenase subunit D (EC 1.2.99.5)
Formylmethanofuran dehydrogenase (tungsten) operon gene F (polyferredoxin)
Formylmethanofuran dehydrogenase (tungsten) operon gene G
Formylmethanofuran dehydrogenase (tungsten) operon gene H
Formylmethanofuran dehydrogenase (tungsten) subunit B (EC 1.2.99.5)
Formylmethanofuran dehydrogenase (tungsten) subunit C (EC 1.2.99.5)
Formylmethanofuran dehydrogenase (tungsten) subunit D (EC 1.2.99.5)
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase (EC 2.3.1.101)
Formyltetrahydrofolate deformylase (EC 3.5.1.10)
Formyltetrahydrofolate synthetase (EC 6.3.4.3)
Fosfomycin resistance protein FosA
Fosfomycin resistance protein FosB
Fosfomycin resistance protein FosX
Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly
Frataxin, mitochondrial precursor, facilitates iron supply for heme A synthesis or Fe-S cluster assembly
Free methionine-(R)-sulfoxide reductase, fRMsr
Fructanase (EC 3.2.1.80), FruA / Levanase (EC 3.2.1.65)
Fructokinase (EC 2.7.1.4)
Fructokinase FrcK (EC 2.7.1.4)
Fructokinase in mannitol utilization gene cluster (EC 2.7.1.4)
Fructokinase in mannoside utilization gene cluster (EC 2.7.1.4)
Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)
Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)
Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)
Fructose-1,6-bisphosphatase, type V, archaeal (EC 3.1.3.11)
Fructose-6-phosphate phosphoketolase (EC 4.1.2.22)
Fructose ABC transporter, ATP-binding component FrcA
Fructose ABC transporter, permease component FrcC
Fructose ABC transporter, substrate-binding component FrcB
Fructose-bisphosphate aldolase, archaeal class I (EC 4.1.2.13)
Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Fructose-bisphosphate aldolase (EC 4.1.2.13)
Fructoselysine 3-epimerase
Fructoselysine 6-phosphate deglycase (EC 3.5.-.-)
Fructoselysine kinase (EC 2.7.1.-)
Fructoselysine transporter FrlA, cationic amino acid permease
Fructose repressor FruR, LacI family
fructose response regulator of fruA and EII fructose/mannose
fructose sensor histidine kinase
Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69)
FtsK/SpoIIIE family protein, putative secretion system component EssC/YukA
FtsK/SpoIIIE family protein Rv3870, component of ESX-1 secretion system
FtsK/SpoIIIE family protein Rv3871, component of ESX-1 secretion system
Fucose permease
Fumarate and nitrate reduction regulatory protein
Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Fumarate hydratase class I, anaerobic (EC 4.2.1.2)
Fumarate hydratase class I (EC 4.2.1.2)
Fumarate hydratase class II (EC 4.2.1.2)
Fumarate reductase cytochrome b subunit
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Fumarate reductase subunit C
Fumarate reductase subunit D
fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase
Fumarylacetoacetase (EC 3.7.1.2)
Fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.5)
Fumarylacetoacetate (FAA) hydrolase (EC 4.1.1.68)
Fumarylacetoacetate hydrolase family protein
Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR
Functional role page for Chaperone protein TorD
Functional role page for Cytochrome c-type protein TorC
Functional role page for Cytochrome c-type protein TorY
Functional role page for TorCAD operon transcriptional regulatory protein TorR
GABA aminotransferase (EC 2.6.1.19)
GAF domain/GGDEF domain/EAL domain protein
Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)
Galactitol utilization operon repressor
Galactocerebrosidase precursor (EC 3.2.1.46)
Galactokinase (EC 2.7.1.6)
Galactonate dehydratase (EC 4.2.1.6)
Galactosamine-6-phosphate isomerase (galactosamine-6-phosphate deaminase) (EC 5.3.1.-)
galactosamine-containing minor teichoic acid biosynthesis protein
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
Galactose-3-O-sulfotransferase 3 (EC 2.8.2.-)
Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
Galactose operon repressor, GalR-LacI family of transcriptional regulators
Galactose permease
Galactoside O-acetyltransferase (EC 2.3.1.18)
Galactosylceramide sulfotransferase (EC 2.8.2.11)
Galactosyl transferase CpsE (EC 2.7.8.-)
GALNS arylsulfatase regulator (Fe-S oxidoreductase)
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
gamma-carotene desaturase, putative
gamma-carotene hydroxylase
Gamma-D-Glutamyl-meso-Diaminopimelate Amidase
Gamma-DL-glutamyl hydrolase PgsS (EC 3.4.19.-), catalyzes PGA release
Gamma-glutamyl-aminobutyraldehyde dehydrogenase (EC 1.2.1.-)
Gamma-glutamyl cyclotransferase (EC 2.3.2.4)
Gamma-glutamyl-GABA hydrolase
Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94)
Gamma-glutamyl phosphate reductase (EC 1.2.1.41)
Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)
Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
Gamma-glutamyltranspeptidase (EC 2.3.2.2)
Gamma-glutamyltranspeptidase PgsD/CapD (EC 2.3.2.2), catalyses PGA anchorage to peptidoglycan
Gamma-hemolysin component A
Gamma-hemolysin component B
Gamma-hemolysin component C
Gamma-tocopherol C-methyltransferase (EC 2.1.1.95)
GatB protein
GCN5-related N-acetyltransferase, FIGfam019367
GDP-L-fucose synthetase (EC 1.1.1.271)
GDP-mannose 4,6-dehydratase (EC 4.2.1.47)
GDP-mannose 6-dehydrogenase (EC 1.1.1.132)
GDP-mannose mannosyl hydrolase (EC 3.6.1.-)
GDP-mannose pyrophosphatase YffH
GDSL-like lipase/acylhydrolase
General secretion pathway protein C
General secretion pathway protein D
General secretion pathway protein E
General secretion pathway protein F
General secretion pathway protein G
General secretion pathway protein H
General secretion pathway protein I
General secretion pathway protein J
Gene SCO4494, often clustered with other genes in menaquinone via futalosine pathway
Gentisate 1,2-dioxygenase (EC 1.13.11.4)
Geranyl-CoA carboxylase biotin-containing subunit
Geranyl-CoA carboxylase carboxyl transferase subunit
Geranylgeranyl hydrogenase BchP
Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10)
Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD
GftB: Glycosyl transferase, family 8
GGDEF and EAL domain proteins
GGDEF/EAL domain protein YhjH
(GlcNAc)2 ABC transporter, ATP-binding component 1
(GlcNAc)2 ABC transporter, ATP-binding component 2
(GlcNAc)2 ABC transporter, periplasmic substrate-binding protein
(GlcNAc)2 ABC transporter, permease component 1
(GlcNAc)2 ABC transporter, permease component 2
GlcNAc phosphomutase (EC 5.4.2.3)
GldB
GldD
GldI
GldJ
Gliding motility protein (GldA) related protein
gliding motility protein GldF
gliding motility protein GldG
gliding motility protein MglA
Global nitrogen regulatory protein, CRP family of transcriptional regulators
GltC, transcription activator of glutamate synthase operon
Glucan 1,6-alpha-glucosidase (EC 3.2.1.70)
Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)
Glucans biosynthesis protein C (EC 2.1.-.-)
Glucans biosynthesis protein D precursor
Glucans biosynthesis protein G precursor
Glucarate dehydratase (EC 4.2.1.40)
Glucitol operon activator protein
Glucitol operon GutQ protein
Glucitol operon repressor
Glucoamylase (EC 3.2.1.3)
Glucokinase (EC 2.7.1.2)
Glucokinase, ROK family (EC 2.7.1.2)
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
Gluconate dehydratase (EC 4.2.1.39)
Gluconate operon transcriptional repressor
Gluconate permease, Bsu4004 homolog
Gluconate transporter family protein
Gluconate utilization system Gnt-I transcriptional repressor
Gluconokinase (EC 2.7.1.12)
Gluconolactonase (EC 3.1.1.17)
Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
Glucosamine 6-phosphate N-acetyltransferase (EC 2.3.1.4)
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Glucosamine kinase GpsK (EC 2.7.1.8)
Glucosamine-link cellobiase (EC 3.2.1.21)
Glucose 1-dehydrogenase (EC 1.1.1.47)
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33)
Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Glucose-6-phosphate isomerase, archaeal (EC 5.3.1.9)
Glucose-6-phosphate isomerase, archaeal II (EC 5.3.1.9)
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, cytochrome c
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, flavoprotein
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, gamma subunit
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2)
GLUCOSE-FRUCTOSE OXIDOREDUCTASE (EC 1.1.99.28)
Glucose/mannose:H+ symporter GlcP
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site
Glucuronide transporter UidB
Glucuronide transport facilitator UidC
Glucuronide transport protein YihO
Glucuronide transport protein YihP, homologous to YihO
Glutaconyl-CoA decarboxylase alpha chain (EC 4.1.1.70)
Glutaconyl-CoA decarboxylase beta chain (EC 4.1.1.70)
Glutaconyl-CoA decarboxylase delta chain (EC 4.1.1.70)
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
Glutamate 5-kinase (EC 2.7.2.11)
Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)
Glutamate Aspartate periplasmic binding protein precursor gltI (TC 3.A.1.3.4)
Glutamate Aspartate transport ATP-binding protein gltL (TC 3.A.1.3.4)
Glutamate Aspartate transport system permease protein gltJ (TC 3.A.1.3.4)
Glutamate Aspartate transport system permease protein gltK (TC 3.A.1.3.4)
Glutamate--cysteine ligase (EC 6.3.2.2)
Glutamate--cysteine ligase (EC 6.3.2.2), divergent, of Alpha- and Beta-proteobacteria type
Glutamate--cysteine ligase eukaryotic (EC 6.3.2.2)
Glutamate formiminotransferase (EC 2.1.2.5)
Glutamate-glyoxylate aminotransferase (EC 2.6.1.4)
Glutamate/malate translocator DiT2.1, plastidic
Glutamate N-acetyltransferase (EC 2.3.1.35)
Glutamate-pyruvate aminotransferase (EC 2.6.1.2)
Glutamate racemase (EC 5.1.1.3)
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
Glutaminase (EC 3.5.1.2)
Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
Glutamine amidotransferase chain of NAD synthetase
Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase
Glutamine synthetase, clostridia type (EC 6.3.1.2)
Glutamine synthetase (EC 6.3.1.2)
glutamine synthetase family protein
Glutamine synthetase family protein in hypothetical Actinobacterial gene cluster
Glutamine synthetase inactivating factor IF17
Glutamine synthetase inactivating factor IF7
Glutamine synthetase type I (EC 6.3.1.2)
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2)
Glutamine synthetase type III, GlnN (EC 6.3.1.2)
Glutamine transport ATP-binding protein glnQ (TC 3.A.1.3.2)
Glutamine transport system permease protein glnP (TC 3.A.1.3.2)
Glutaminyl-tRNA synthetase (EC 6.1.1.18)
Glutaminyl-tRNA synthetase (EC 6.1.1.18), mitochondrial
glutamyl-Q-tRNA synthetase
Glutamyl-tRNA(Gln) amidotransferase asparaginase subunit (EC 6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase transferase subunit (EC 6.3.5.-)
Glutamyl-tRNA(Gln) synthetase
Glutamyl-tRNA reductase (EC 1.2.1.70)
Glutamyl-tRNA synthetase (EC 6.1.1.17)
Glutamyl-tRNA synthetase (EC 6.1.1.17), mitochondrial
Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20)
Glutaredoxin
Glutaredoxin 1
Glutaredoxin 2
Glutaredoxin 3
Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
Glutaredoxin-related protein
Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3)
Glutathione-dependent formaldehyde-activating enzyme (EC 4.4.1.22)
Glutathione peroxidase (EC 1.11.1.9)
Glutathione reductase (EC 1.8.1.7)
Glutathione-regulated potassium-efflux system ancillary protein KefF
Glutathione-regulated potassium-efflux system ancillary protein KefG
Glutathione-regulated potassium-efflux system ATP-binding protein
Glutathione-regulated potassium-efflux system protein kefB
Glutathione-regulated potassium-efflux system protein KefC
Glutathione-regulated potassium-efflux system protein KefKL
Glutathione S-transferase, alpha (EC 2.5.1.18)
Glutathione S-transferase, delta (EC 2.5.1.18)
Glutathione S-transferase domain protein
Glutathione S-transferase (EC 2.5.1.18)
Glutathione S-transferase, epsilon (EC 2.5.1.18)
Glutathione S-transferase family protein
Glutathione S-transferase, kappa (EC 2.5.1.18)
Glutathione S-transferase, mu (EC 2.5.1.18)
Glutathione S-transferase N-terminal domain protein (EC 2.5.1.18)
Glutathione S-transferase, omega (EC 2.5.1.18)
Glutathione S-transferase, phi (EC 2.5.1.18)
Glutathione S-transferase, pi (EC 2.5.1.18)
Glutathione S-transferase, Streptococcal type (EC 2.5.1.18)
Glutathione S-transferase, theta (EC 2.5.1.18)
Glutathione S-transferase, unnamed subgroup 2 (EC 2.5.1.18)
Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Glutathione S-transferase, zeta (EC 2.5.1.18)
Glutathione synthetase (EC 6.3.2.3)
Glutathionylspermidine amidohydrolase (EC 3.5.1.78)
Glutathionylspermidine synthase (EC 6.3.1.8)
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) (GAPDH)
Glyceraldehyde-3-phosphate: ferredoxin oxidoreductase (EC 1.2.7.6)
Glyceraldehyde-3-phosphate ketol-isomerase (EC 5.3.1.1)
Glycerate kinase (EC 2.7.1.31)
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)
Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)
Glycerol-3-phosphate regulon repressor, DeoR family
Glycerol-3-phosphate transporter
Glycerol dehydratase large subunit (EC 4.2.1.30)
Glycerol dehydratase medium subunit (EC 4.2.1.30)
Glycerol dehydratase reactivation factor large subunit
Glycerol dehydratase reactivation factor small subunit
Glycerol dehydratase small subunit (EC 4.2.1.30)
Glycerol dehydrogenase (EC 1.1.1.6)
Glycerol kinase (EC 2.7.1.30)
Glycerol uptake facilitator protein
Glycerol uptake operon antiterminator regulatory protein
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32)
Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC
Glycine betaine ABC transport system, permease/glycine betaine-binding protein OpuABC
Glycine betaine ABC transport system permease protein
Glycine betaine ABC transport system, permease protein OpuAB
Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline- binding/permease protein
Glycine betaine transporter OpuD
Glycine cleavage system H protein
Glycine cleavage system transcriptional activator
Glycine cleavage system transcriptional activator GcvA
Glycine cleavage system transcriptional antiactivator GcvR
Glycine/D-amino acid oxidase (deaminating) in putrescine utilization cluster
Glycine decarboxylase L-protein 1 (EC 1.8.1.4), mitochondrial
Glycine decarboxylase L-protein 2 (EC 1.8.1.4), mitochondrial
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Glycine N-methyltransferase (EC 2.1.1.20)
Glycine oxidase ThiO (EC 1.4.3.19)
Glycine reductase component B alpha subunit (EC 1.21.4.2)
Glycine reductase component B beta subunit (EC 1.21.4.2)
Glycine reductase component B gamma subunit (EC 1.21.4.2)
Glycine/sarcosine/betaine reductase component C chain 1
Glycine/sarcosine/betaine reductase component C chain 2
Glycine/sarcosine/betaine reductase protein A
Glycogen biosynthesis protein GlgD, glucose-1-phosphate adenylyltransferase family
Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)
Glycogen debranching enzyme (EC 3.2.1.-)
Glycogen phosphorylase (EC 2.4.1.1)
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Glycogen synthase (EC 2.4.1.21)
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Glycolate oxidase (EC 1.1.3.15)
Glycolate oxidase (EC 1.1.3.15), peroxisomal
Glycolate permease
Glycolate utilization operon transcriptional activator GlcC
Glycosyltransferase
Glycosyl transferase CpsG
Glycosyltransferase (EC 2.4.1.-) in large core OS assembly cluster
Glycosyltransferase (EC 2.4.1.-) SypH
Glycosyltransferase (EC 2.4.1.-) SypI
Glycosyltransferase (EC 2.4.1.-) SypJ
Glycosyl transferase, group 1
Glycosyl transferase, group 1 family, anthrose biosynthesis
Glycosyl transferase, group 1 family protein
Glycosyl transferase, group 1 family protein (EC 2.4.1.-)
Glycosyl transferase ,group 2 family, anthrose biosynthesis
Glycosyl transferase, group 2 family protein
Glycosyl transferase in large core OS assembly cluster
Glycosyl transferase involved in teichoic acid biosynthesis
Glycosyltransferase IroB
Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)
Glycosyltransferase PglI (EC 2.4.1.-)
Glycosyltransferase SypN
Glycosyltransferase SypP
Glycosyltransferase SypQ
Glycosyl transferase WecB/TagA/CpsF
Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
Glycyl-tRNA synthetase (EC 6.1.1.14)
Glycyl-tRNA synthetase (EC 6.1.1.14), mitochondrial
Glyoxylate carboligase (EC 4.1.1.47)
Glyoxylate reductase (EC 1.1.1.26)
Glyoxylate reductase (EC 1.1.1.79)
GMP reductase
GMP reductase (EC 1.7.1.7)
GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)
Group 2 RNA polymerase sigma factor
Growth-arrest-specific protein 8
GTPase and tRNA-U34 5-formylation enzyme TrmE
GTPase Nop2p which associates with pre-60S ribosomal subunits in the nucleolus and is required for their export and maturation
GTPase Nug1p, which associates with pre-60S ribosomal subunits in the nucleolus and is required for their export from the nucleus
GTP-binding and nucleic acid-binding protein YchF
GTP-binding protein
GTP-binding protein EngA
GTP-binding protein EngB
GTP-binding protein Era
GTP-binding protein HflX
GTP-binding protein related to HflX
GTP-binding protein TypA/BipA
GTP-binding protein YqeH, possibly involved in replication initiation
GTP cyclohydrolase I (EC 3.5.4.16) type 1
GTP cyclohydrolase I (EC 3.5.4.16) type 2
GTP cyclohydrolase II (EC 3.5.4.25)
GTP cyclohydrolase III (EC 3.5.4.29)
GTP pyrophosphokinase
GTP pyrophosphokinase (EC 2.7.6.5)
GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I
GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II
GTP-sensing transcriptional pleiotropic repressor codY
G:T/U mismatch-specific uracil/thymine DNA-glycosylase
Guanine deaminase (EC 3.5.4.3)
Guanine-hypoxanthine permease
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (EC 3.6.1.40)
Guanylate kinase (EC 2.7.4.8)
H-2 class II histocompatibility antigen, gamma chain
Haemin uptake system ATP-binding protein
Haemin uptake system outer membrane receptor
Haemin uptake system periplasmic haemin-binding protein
Haemin uptake system permease protein
HAM1-like protein
HBS1 protein
Hca operon (3-phenylpropionic acid catabolism) transcriptional activator HcaR
HCOMODA decarboxylase
Hcp transcriptional regulator HcpR (Crp/Fnr family)
Heat-inducible transcription repressor HrcA
Heat shock protein 15
Heat shock protein 60 family chaperone GroEL
Heat shock protein 60 family co-chaperone GroES
Heat shock protein GrpE
Heavy metal resistance transcriptional regulator HmrR
Heavy metal RND efflux outer membrane protein, CzcC family
Heavy metal sensor histidine kinase
Helicase IV (EC 3.6.1.-)
Helicase loader DnaI
Helicase PriA essential for oriC/DnaA-independent DNA replication
Heme ABC transporter, ATPase component HmuV
Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT
Heme ABC transporter, permease protein HmuU
Heme ABC transporter (Streptococcus), ATP-binding protein
Heme ABC transporter (Streptococcus), heme and hemoglobin-binding protein SiaA/HtsA
Heme ABC transporter (Streptococcus), permease protein
Heme ABC type transporter HtsABC, heme-binding protein
Heme ABC type transporter HtsABC, permease protein HtsB
Heme ABC type transporter HtsABC, permease protein HtsC
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA
Heme bearing subunit I of the terminal oxidase (DoxB)
Heme-binding SCHIC domain protein, putative oxygen sensor
Heme biosynthesis protein related to NirD
Heme biosynthesis protein related to NirD and NirG
Heme biosynthesis protein related to NirG
Heme biosynthesis protein related to NirH
Heme biosynthesis protein related to NirL
Heme biosynthesis protein related to NirL and NirH
Heme d1 biosynthesis protein NirD
Heme d1 biosynthesis protein NirF
Heme d1 biosynthesis protein NirG
Heme d1 biosynthesis protein NirH
Heme d1 biosynthesis protein NirJ
Heme d1 biosynthesis protein NirL
Heme-degrading cytoplasmic oxygenase IsdG
Heme-degrading cytoplasmic oxygenase IsdI
Heme efflux system ATPase HrtA
Heme efflux system permease HrtB
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Heme oxygenase (EC 1.14.99.3)
Heme oxygenase HemO, associated with heme uptake
Heme-regulated cyclic AMP phosphodiesterase (EC 3.1.4.-)
Hemerythrin-like iron-binding protein
Heme transporter analogous to IsdDEF, ATP-binding protein
Heme transporter IsdDEF, lipoprotein IsdE
Heme transporter IsdDEF, membrane component IsdD
Heme transporter IsdDEF, permease component IsdF
heme uptake regulator
heme uptake transmembrane sensor
hemimethylated DNA binding protein YccV
Hemin ABC transporter, permease protein
Hemin receptor protein HemR
Hemin transport protein HmuS
Hemin uptake protein
Hemin uptake protein HemP
Hemoglobin-dependent two component system response regulator HrrA
Hemoglobin-dependent two component system, sensory histidine kinase HrrS
Hemoglobin, heme-dependent two component system response regulator ChrA
Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS
Hemoglobin-like protein HbO
Hemolysin-related protein RbmC
Hemolysin-related protein Vcp
Hemophore HasA
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
Heparinase II/III-like
Heparin cofactor II, protease inhibitor I04.019
Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)
Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
Heptosyltransferase family protein, lipopolysaccharide core biosynthesis
Heterocyst differentiation protein HetC
Heterocyst differentiation protein HetP
Heterocyst formation inhibiting signaling peptide PatS
Heterodisulfide reductase, cytochrome reductase subunit
heterodisulfide reductase, iron-sulfur binding subunit, putative
Heterodisulfide reductase, subunit A
heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta
heterodisulfide reductase, subunit E, putative
Heteropolysaccharide repeat unit export protein
Hexaprenyl pyrophosphate synthetase
Hexokinase D (EC 2.7.1.1)
Hexokinase (EC 2.7.1.1)
Hexose phosphate transport protein UhpT
Hexose phosphate uptake regulatory protein UhpC
Hexuronate transporter
Hexuronate utilization operon transcriptional repressor ExuR
HflC protein
HflK protein
HigA protein (antitoxin to HigB)
HigB toxin protein
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
High-affinity choline uptake protein BetT
High-affinity gluconate transporter GntT
High-affinity leucine-specific transport system, periplasmic binding protein livK (TC 3.A.1.4.1)
High-affnity carbon uptake protein Hat/HatR
HipA protein
HipB protein
His repressor
Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1)
Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1)
Histidine ammonia-lyase (EC 4.3.1.3)
Histidine kinase of the competence regulon ComD
Histidine transport protein (permease)
Histidine triad (HIT) protein
Histidine utilization repressor
Histidinol dehydrogenase (EC 1.1.1.23)
Histidinol-phosphatase [alternative form] (EC 3.1.3.15)
Histidinol-phosphatase (EC 3.1.3.15)
Histidinol-phosphate aminotransferase (EC 2.6.1.9)
Histidyl-tRNA synthetase (EC 6.1.1.21)
Histidyl-tRNA synthetase (EC 6.1.1.21), mitochondrial
histone acetyltransferase, ELP3 family
Histone acetyltransferase HPA2 and related acetyltransferases
Hmc operon transcriptional regulator Rrf2
HmrA protein involved in methicillin resistance
HmrB protein involved in methicillin resistance
Holin associated hypothetical protein
Holin associated membrane protein 1
Holin associated membrane protein 2
Holin [Bacteriophage A118]
Holin-like protein 1
Holin-like protein 2
Holin-like protein CidA
Holin [SA bacteriophages 11, Mu50B]
Holliday junction DNA helicase RuvA
Holliday junction DNA helicase RuvB
Holo-[acyl-carrier protein] synthase, alternative (EC 2.7.8.7)
Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)
Homoaconitase large subunit (EC 4.2.1.36)
Homoaconitase small subunit (EC 4.2.1.36)
Homocitrate synthase (EC 2.3.3.14)
Homocysteine S-methyltransferase (EC 2.1.1.10)
HOMODA hydrolase (CmtE) (EC 3.7.1.-)
Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Homogentisate prenyltransferase
Homoisocitrate dehydrogenase (EC 1.1.1.87)
Homolog of E. coli HemY protein
Homoprotocatechuate degradative operon repressor
Homoserine dehydrogenase (EC 1.1.1.3)
Homoserine kinase (EC 2.7.1.39)
Homoserine lactone synthase YpeI
Homoserine O-acetyltransferase (EC 2.3.1.31)
Homoserine O-succinyltransferase (EC 2.3.1.46)
HoxN/HupN/NixA family cobalt transporter
HoxN/HupN/NixA family nickel/cobalt transporter
Hpa2 protein
HpaA protein
HpaP protein
HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
HrcQ protein
HrpB1 protein
HrpB2 protein
HrpB4 protein
HrpD5 protein
HrpD6 protein
HrpF protein
Hsp20 family protein possibly involved in photorespiration
HspR, transcriptional repressor of DnaK operon
HTH domain protein SA1665, binds to mecA promoter region
HTH-type transcriptional regulator BetI
HTH-type transcriptional regulator IlvY
HTH-type transcriptional regulator PtxR
HtrA protease/chaperone protein
HupE-UreJ family cobalt transporter
HupE-UreJ family metal transporter
Hut operon positive regulatory protein
Hyaluronan mediated motility receptor
Hyaluronan synthase 2 (EC 2.4.1.212)
Hyaluronan synthase 3 (EC 2.4.1.212)
Hyaluronan synthase (EC 2.4.1.212)
Hyaluronate lyase precursor (EC 4.2.2.1)
Hyaluronoglucosaminidase (EC 3.2.1.35)
Hybrid sensory histidine kinase in two-component regulatory system with EvgA
Hydantoinase
Hydantoin permease
hydantoin racemase
Hydantoin racemase (EC 5.1.99.-)
Hydantoin utilization protein A
Hydrogenase-4 component A (EC 1.-.-.-)
Hydrogenase-4 component B (EC 1.-.-.-)
Hydrogenase-4 component C (EC 1.-.-.-)
Hydrogenase-4 component D (EC 1.-.-.-)
Hydrogenase-4 component E (EC 1.-.-.-)
Hydrogenase-4 component F (EC 1.-.-.-)
Hydrogenase-4 component G (EC 1.-.-.-)
Hydrogenase-4 component H (EC 1.-.-.-)
Hydrogenase-4 component I (EC 1.-.-.-)
Hydrogenase-4 transcriptional activator
hydrogenase (cytochrome-c3 hydrogenase beta chain)
hydrogenase, group 4, HycE subunit, putative
hydrogenase, group 4, HycG subunit, putative
hydrogenase, HycC subunit, putative
Hydrogenase maturation factor hoxL
Hydrogenase maturation factor hoxO
Hydrogenase maturation factor hoxQ
Hydrogenase maturation factor hoxR
Hydrogenase maturation factor hoxV
Hydrogenase maturation protease (EC 3.4.24.-)
hydrogenase, methyl-violgen-reducing type, delta subunit
hydrogenase, (NiFe)/(NiFeSe) small subunit family
hydrogenase, subunit gamma related protein
hydrogenase/sulfur reductase, alpha subunit
hydrogenase/sulfur reductase, beta subunit
hydrogenase/sulfur reductase, delta subunit
hydrogenase/sulfur reductase, gamma subunit
Hydrogen peroxide-inducible genes activator
Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase
Hydrolase (HAD superfamily)
Hydrolase (HAD superfamily) in cluster with DUF1447
Hydrolase (HAD superfamily), YqeK
Hydrolase in cluster with beta-lactamase (HAD superfamily)
Hydrolase in polyol utilization gene cluster, haloacid dehalogenase-like family
Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
Hydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-)
Hydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-)
Hydroxyaromatic non-oxidative decarboxylase protein D (EC 4.1.1.-)
hydroxybenzoate permease
Hydroxybenzoyl-CoA reductase subunit
hydroxycinnamate specific porine
Hydroxyethylthiazole kinase (EC 2.7.1.50)
Hydroxylamine reductase (EC 1.7.-.-)
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10)
Hydroxymethylpyrimidine ABC transporter, ATPase component
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Hydroxymethylpyrimidine ABC transporter, transmembrane component
Hydroxymethylpyrimidine synthesis protein THI5
Hydroxyneurosporene dehydrogenase (EC 1.-.-.-)
Hydroxyneurosporene methyltransferase (EC 2.1.1.-)
Hydroxyneurosporene synthase
Hydroxypyruvate isomerase (EC 5.3.1.22)
Hydroxypyruvate reductase (EC 1.1.1.81)
Hydroxypyruvate reductase, putative (EC 1.1.1.81)
Hydroxysteroid sulfotransferase SULT2B1a (EC 2.8.2.2)
Hypotehtical protein in Cytochrome oxidase biogenesis cluster
Hypothertical protein, coexpressed with pyoverdine biosynthesis regulon
Hypothetical ATP-binding protein, containing DUF265 domain
Hypothetical bd-type Menaquinol oxidase subunit
hypothetical cytochrome c oxidase polypeptide I
Hypothetical, distant similarity with heme-degrading oxygenase IsdG
hypothetical fig|282458.1.peg.572 homolog
hypothetical fig|282458.1.peg.573 homolog
hypothetical fig|282458.1.peg.578 homolog
hypothetical fig|282458.1.peg.579 homolog
hypothetical fig|282458.1.peg.581 homolog
hypothetical fig|282458.1.peg.583 homolog
hypothetical fig|418127.4.peg.560 homolog
Hypothetical fimbrial chaperone yqiH
Hypothetical flavoprotein YqcA (clustered with tRNA pseudouridine synthase C)
Hypothetical glycoside hydrolase, family 43, similar to arabinosidase
Hypothetical hydrolase YgeZ (EC 3.-.-.-)
Hypothetical iron-sulfur cluster binding protein YccM
Hypothetical lactonase in carbon monoxide dehydrogenase cluster
Hypothetical lysR-family transcriptional regulator YdhB
Hypothetical MbtH-like protein, PA2412 homolog
Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly
Hypothetical mga-associated protein
Hypothetical MW0753 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical MW0754 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical NagD-like phosphatase
Hypothetical nudix hydrolase YeaB
Hypothetical Nudix-like regulator
hypothetical oxidoreductase related to N-acetylglucosamine utilization
Hypothetical oxidoreductase YdjG (EC 1.-.-.-)
Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster
hypothetical phosphosugar isomerases
Hypothetical protein (associated with DNA helicase - Rad25 homolog)
Hypothetical protein associated with short form of CcmH
Hypothetical protein, bax gene locus
hypothetical protein BH3604
hypothetical protein clusted with conjugative transposons, BF0131
Hypothetical protein colocalized with Enterobactin receptor VctA
Hypothetical protein DUF194, DegV family
Hypothetical protein DUF454
Hypothetical protein DUF901, similar to C-terminal domain of ribosome protection-type Tc-resistance proteins
Hypothetical protein FIG009695
Hypothetical protein FIG015671 in large core OS assembly cluster
Hypothetical protein FIG016047
Hypothetical protein FIG016644
Hypothetical protein FtpB
Hypothetical protein, GBAA2540 homolog
Hypothetical protein GlcG in glycolate utilization operon
Hypothetical protein in aerobactin uptake cluster
Hypothetical protein in ApbE locus
Hypothetical protein in Beta-1,3-glycosyltransferase cluster
Hypothetical protein in cluster with dihydroxyacetone kinase in Rhizobia
Hypothetical protein in cluster with penicillin-binding protein PBP1, Bacillus type
Hypothetical protein in cluster with penicillin-binding protein PBP1, Listerial type
Hypothetical protein in cluster with penicillin-binding protein PBP1, Staphylococcal type
Hypothetical protein in cluster with SinR and SinI
Hypothetical protein in Cyanoglobin locus
Hypothetical protein in predicted poly-gamma-glutamate synthase operon
Hypothetical protein in pyoverdin gene cluster
Hypothetical protein in pyoverdin gene cluster, PA2405 homolog
Hypothetical protein in pyoverdin gene cluster, PA2406 homolog
Hypothetical protein involved in heavy metal export
Hypothetical protein i Rubrerythrin cluster
Hypothetical protein, Lin0079 homolog [Bacteriophage A118]
Hypothetical protein, Lmo2276 homolog
Hypothetical protein, Lmo2305 homolog [Bacteriophage A118]
Hypothetical protein, Lmo2306 homolog [Bacteriophage A118]
Hypothetical protein, Lmo2307 homolog [Bacteriophage A118]
Hypothetical protein, Lmo2313 homolog [Bacteriophage A118]
hypothetical protein NAS141_09886
hypothetical protein PA3071
Hypothetical protein, phi-ETA orf16 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, phi-ETA orf17 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, phi-ETA orf24 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, phi-ETA orf33 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, phi-ETA orf42 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, phi-ETA orf55 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, phi-ETA orf58 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, phi-ETA orf63 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase
Hypothetical protein probably associated with Carbamoyl-phosphate synthase
Hypothetical protein probably related to Formate dehydrogenase function
Hypothetical protein, PV83 orf10 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PV83 orf12 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PV83 orf19 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PV83 orf 20 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PV83 orf22 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PV83 orf23 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PV83 orf3 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PV83 orf4 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein PvdX
Hypothetical protein PvdY
Hypothetical protein pVir0004
Hypothetical protein pVir0007
Hypothetical protein pVir0008
Hypothetical protein pVir0009
Hypothetical protein pVir0010
Hypothetical protein pVir0012
Hypothetical protein pVir0015
Hypothetical protein pVir0016
Hypothetical protein pVir0019/pVir0020
Hypothetical protein pVir0021
Hypothetical protein pVir0029, glutamine-rich
Hypothetical protein pVir0042
Hypothetical protein, PVL orf39 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PVL orf50 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PVL orf51 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, PVL orf52 homolog [SA bacteriophages 11, Mu50B]
hypothetical protein pYVe8081_p05
Hypothetical protein Q8DBD3_VIBVU
Hypothetical protein Q, similar to Chlorite dismutase
Hypothetical protein RbmB
Hypothetical protein RbmE
Hypothetical protein RbmF
hypothetical protein Rv3802c
hypothetical protein SA_21
Hypothetical protein, SAB1734c homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAB1742c homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAV0849 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAV0852 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAV0860 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAV0876 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAV0877 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAV0878 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAV0880 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SAV0881 homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein SAV1831
Hypothetical protein SAV1839
Hypothetical protein SAV1840
Hypothetical protein SAV1869
Hypothetical protein SAV1877
Hypothetical protein SAV1882
hypothetical protein SC6C5.04c
Hypothetical protein, similarity with fibrinogen-binding protein Efb
Hypothetical protein, similarity with von Willebrand factor-binding VWbp
hypothetical protein SKA53_09994
Hypothetical protein, Slr0957 homolog
Hypothetical protein, SLT orf81b homolog [SA bacteriophages 11, Mu50B]
Hypothetical protein, SLT orf99 homolog [SA bacteriophages 11, Mu50B]
hypothetical protein sometimes fused to ribosomal protein S6 glutaminyl transferase
Hypothetical protein, Spy1939 homolog
Hypothetical protein, sulfurtransferase domain
Hypothetical protein TdcF in cluster with anaerobic degradation of L-threonine to propionate
hypothetical protein that often co-occurs with aconitase
hypothetical protein TM1757
Hypothetical protein VpsF
Hypothetical protein VpsJ
Hypothetical protein VpsP
Hypothetical protein VpsQ
Hypothetical protein YaeJ with similarity to translation release factor
Hypothetical protein YceD (clustered with ribosomal protein L32p)
Hypothetical protein, ydbS homolog
Hypothetical protein, ydbT homolog
Hypothetical protein YfkI
Hypothetical protein YfkK
Hypothetical protein yhhQ
Hypothetical protein YrhD
Hypothetical protein ywlG
Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent
Hypothetical, related to broad specificity phosphatases COG0406
Hypothetical SAR0365 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAR0369 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAR0371 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAR0372 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAR0385 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0786 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0787 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0788 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0789 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0790 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0791 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0792 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0793 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0794 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0795 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0796 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0797 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0798 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0799 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0801 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV0808 homolog, near pathogenicity islands SaPI att-site
Hypothetical SAV2026 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical SAV2027 homolog in superantigen-encoding pathogenicity islands SaPI
Hypothetical secreted sugar oxidoreductase, Gfo/Idh/MocA family, GalNAc-related
Hypothetical, similarity to phosphoglycerate mutase
Hypothetical, similar to sarcosine oxidase alpha subunit, 2Fe-2S domain
Hypothetical similar to thiamin biosynthesis lipoprotein ApbE
Hypothetical succinate dehydrogenase membrane anhor protein
Hypothetical sugar kinase in cluster with indigoidine synthase indA , PfkB family of kinases
Hypothetical transmembrane protein CDS_ID OB1773
Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase chain 5 homolog
Hypothetical transmembrane protein ywlD
Hypothetical zinc-type alcohol dehydrogenase-like protein YdjJ
Hypothetical zinc-type alcohol dehydrogenase-like protein YphC
Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)
IcmF-related protein
identified by similarity to GB:AAK22812.1
IgaA: a membrane protein that prevents overactivation of the Rcs regulatory system
IgG-binding protein SBI
Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)
Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Imidazolonepropionase (EC 3.5.2.7)
Immune inhibitor A metalloprotease
Immunity factor CibC
Immunity factor ComM
Immunogenic secreted protein
Immunoglobulin G-endopeptidase (IdeS)
IMP cyclohydrolase (EC 3.5.4.10)
IMP cyclohydrolase (EC 3.5.4.10) [alternate form]
IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
IMP dehydrogenase related 1 (EC 1.1.1.205)
IMP dehydrogenase related 2 (EC 1.7.1.7)
Inactive homolog of metal-dependent proteases, putative molecular chaperone
IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI
IncF plasmid conjugative transfer fertility inhibition protein FinO
IncF plasmid conjugative transfer mating signal transduction protein TraM
IncF plasmid conjugative transfer pilin acetylase TraX
IncF plasmid conjugative transfer pilin protein TraA
IncF plasmid conjugative transfer pilus assembly protein TraB
IncF plasmid conjugative transfer pilus assembly protein TraC
IncF plasmid conjugative transfer pilus assembly protein TraE
IncF plasmid conjugative transfer pilus assembly protein TraF
IncF plasmid conjugative transfer pilus assembly protein TraH
IncF plasmid conjugative transfer pilus assembly protein TraK
IncF plasmid conjugative transfer pilus assembly protein TraL
IncF plasmid conjugative transfer pilus assembly protein TraU
IncF plasmid conjugative transfer pilus assembly protein TraV
IncF plasmid conjugative transfer pilus assembly protein TraW
IncF plasmid conjugative transfer protein TraD
IncF plasmid conjugative transfer protein TraG
IncF plasmid conjugative transfer protein TraN
IncF plasmid conjugative transfer protein TraP
IncF plasmid conjugative transfer protein TraQ
IncF plasmid conjugative transfer protein TraR
IncF plasmid conjugative transfer protein TrbA
IncF plasmid conjugative transfer protein TrbB
IncF plasmid conjugative transfer protein TrbC
IncF plasmid conjugative transfer protein TrbD
IncF plasmid conjugative transfer protein TrbE
IncF plasmid conjugative transfer protein TrbF
IncF plasmid conjugative transfer protein TrbG
IncF plasmid conjugative transfer protein TrbH
IncF plasmid conjugative transfer protein TrbI
IncF plasmid conjugative transfer protein TrbJ
IncF plasmid conjugative transfer regulator TraJ
IncF plasmid conjugative transfer regulator TraY
IncF plasmid conjugative transfer surface exclusion protein TraS
IncF plasmid conjugative transfer surface exclusion protein TraT
IncI1 plasmid conjugative transfer ATPase PilQ
IncI1 plasmid conjugative transfer DNA primase
IncI1 plasmid conjugative transfer inner membrane protein PilR
IncI1 plasmid conjugative transfer lipoprotein PilN
IncI1 plasmid conjugative transfer NusG-type transcription antiterminator TraB
IncI1 plasmid conjugative transfer pilus-tip adhesin protein PilV
IncI1 plasmid conjugative transfer prepilin PilS
IncI1 plasmid conjugative transfer protein PilI
IncI1 plasmid conjugative transfer protein PilJ
IncI1 plasmid conjugative transfer protein PilK
IncI1 plasmid conjugative transfer protein PilL
IncI1 plasmid conjugative transfer protein PilM
IncI1 plasmid conjugative transfer protein TraA
IncI1 plasmid conjugative transfer protein TraC
IncI1 plasmid conjugative transfer protein TraD
IncI1 plasmid conjugative transfer protein TraE
IncI1 plasmid conjugative transfer protein TraF
IncI1 plasmid conjugative transfer protein TraG
IncI1 plasmid conjugative transfer protein TraH
IncI1 plasmid conjugative transfer protein TraI
IncI1 plasmid conjugative transfer protein TraJ, related to pilus biogenesis/retracton protein
IncI1 plasmid conjugative transfer protein TraK
IncI1 plasmid conjugative transfer protein TraL
IncI1 plasmid conjugative transfer protein TraM
IncI1 plasmid conjugative transfer protein TraN
IncI1 plasmid conjugative transfer protein TraO
IncI1 plasmid conjugative transfer protein TraP
IncI1 plasmid conjugative transfer putative membrane protein PilT
IncI1 plasmid pilus assembly protein PilO
IncI1 plasmid pilus assembly protein PilP
IncN plasmid KikA protein
IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog)
IncQ plasmid conjugative transfer DNA primase TraO (pTi TraA homolog)
IncQ plasmid conjugative transfer protein TraB
IncQ plasmid conjugative transfer protein TraG
IncQ plasmid conjugative transfer protein TraP
IncQ plasmid conjugative transfer protein TraQ (RP4 TrbM homolog)
IncW plasmid conjugative protein TrwB (TraD homolog)
IncW plasmid conjugative relaxase protein TrwC (TraI homolog)
Indigoidine synthase A-like protein, uncharacterized enzyme involved in pigment biosynthesis
Indole-3-acetate beta-glucosyltransferase
Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Indole-3-pyruvate decarboxylase (EC 4.1.1.74)
Indole-acetamide hydrolase
Indoleacetamide hydrolase (EC 3.5.1.-)
Indoleamine 2,3-dioxygenase (EC 1.13.11.52)
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)
Indolepyruvate oxidoreductase subunit IorA-like (EC 1.2.7.8)
Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)
Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8)
Inducers of aerial mycelium formation biosynthesis protein BldG
Inducible Fructanase (EC 3.2.1.80), FruB
Inhibitor of vertebrate lysozyme precursor
Inner membrane ABC transporter permease protein YcjO
Inner membrane ABC transporter permease protein YcjP
Inner membrane component of tripartite multidrug resistance system
Inner membrane metabolite transport protein YhjE
Inner membrane protein CreD
Inner membrane protein DotU
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10)
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3)
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8)
Inner membrane protein of type IV secretion of T-DNA complex, TonB-like, VirB10
Inner membrane protein of type IV secretion of T-DNA complex, VirB3
Inner membrane protein of type IV secretion of T-DNA complex, VirB6
Inner membrane protein of type IV secretion of T-DNA complex, VirB8
Inner membrane protein YccF
Inner membrane protein YeaI
Inner membrane protein YghQ, probably involved in polysaccharide biosynthesis
Inner membrane protein ygi cluster
Inner membrane protein ygiZ
Inner membrane protein YhaH
Inner membrane protein YhaI
Inner membrane protein YhjD
Inner membrane protein YphA
Inner membrane protein YqjE
Inner membrane protein YqjF
Inner membrane protein YqjK
Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
Inner membrane transport protein YbaT
Inner membrane transport protein YeiM, in cluster with pseudouridine metabolism operon
Inner membrane transport protein YfaV
Inorganic pyrophospatase PpaX (EC 3.1.3.18)
Inorganic pyrophosphatase (EC 3.6.1.1)
Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)
Inosine-guanosine kinase (EC 2.7.1.73)
Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)
Inosine/xanthosine triphosphatase (EC 3.6.1.-)
Inositol-1-monophosphatase (EC 3.1.3.25)
Inositol-1-phosphate synthase (EC 5.5.1.4)
Inositol oxygenase (EC 1.13.99.1)
Inositol transport system ATP-binding protein
Inositol transport system permease protein
Inositol transport system sugar-binding protein
Inosose dehydratase (EC 4.2.1.44)
Inosose isomerase (EC 5.3.99.-)
Insertion element IS1 protein insA
Insertion element IS1 protein insB
Integral inner membrane protein of type IV secretion complex (VirB6)
Integral membrane protein CcmA involved in cell shape determination
Integrase [Bacteriophage A118]
Integrase/recombinase clustered with segregation and condensation protein B
Integrase regulator RinA [SA bacteriophages 11, Mu50B]
Integrase regulator RinB [SA bacteriophages 11, Mu50B]
Integrase [SA bacteriophages 11, Mu50B]
Integrase, superantigen-encoding pathogenicity islands SaPI
Integration host factor alpha subunit
Integration host factor beta subunit
Integron integrase
Integron integrase IntI1
Integron integrase IntI2
Integron integrase IntI4
Integron integrase IntIPac
intein-containing
Internalin A (LPXTG motif)
Internalin B (GW modules)
Internalin C
Internalin C2 (LPXTG motif)
Internalin D (LPXTG motif)
Internalin E (LPXTG motif)
Internalin G (LPXTG motif)
Internalin H (LPXTG motif)
Internalin-like protein Lin0295 homolog
Internalin-like protein Lin2537 homolog
Internalin-like protein Lmo0549 homolog
Internalin-like protein Lmo2027 homolog
Internalin-like protein Lmo2445 homolog
Internalin-like protein Lmo2470 homolog
Internalin-like protein (LPXTG motif) Lin0290 homolog
Internalin-like protein (LPXTG motif) Lin0372 homolog
Internalin-like protein (LPXTG motif) Lin0661 homolog
Internalin-like protein (LPXTG motif) Lin0739 homolog
Internalin-like protein (LPXTG motif) Lin0740 homolog
Internalin-like protein (LPXTG motif) Lin1204 homolog
Internalin-like protein (LPXTG motif) Lmo0171 homolog
Internalin-like protein (LPXTG motif) Lmo0327 homolog
Internalin-like protein (LPXTG motif) Lmo0331 homolog
Internalin-like protein (LPXTG motif) Lmo0333 homolog
Internalin-like protein (LPXTG motif) Lmo0409 homolog
Internalin-like protein (LPXTG motif) Lmo0514 homolog
Internalin-like protein (LPXTG motif) Lmo0610 homolog
Internalin-like protein (LPXTG motif) Lmo0732 homolog
Internalin-like protein (LPXTG motif) Lmo0801 homolog
Internalin-like protein (LPXTG motif) Lmo1136 homolog
Internalin-like protein (LPXTG motif) Lmo1289 homolog
Internalin-like protein (LPXTG motif) Lmo1290 homolog
Internalin-like protein (LPXTG motif) Lmo2026 homolog
Internalin-like protein (LPXTG motif) Lmo2396 homolog
Internalin-like protein (LPXTG motif) Lmo2821 homolog
Internalin-like protein (LPXTG motif) Lmof0365 homolog
internalin, putative
internalin, putative (LPXTG motif)
Intracellular PHB depolymerase (EC 3.1.1.-)
Intracellular septation protein IspA
Intradiol ring-cleavage dioxygenase (EC 1.13.11.1)
Invasion protein IagB precursor
Invasion protein InvA
Invasion protein InvE
Invasion protein invH precursor
iron aquisition 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58,Irp5)
iron aquisition outermembrane yersiniabactin receptor (FyuA,Psn,pesticin receptor)
iron aquisition regulator (YbtA,AraC-like,required for transcription of FyuA/psn,Irp2)
iron aquisition yersiniabactin synthesis enzyme (Irp1,polyketide synthetase)
iron aquisition yersiniabactin synthesis enzyme (Irp2)
iron aquisition yersiniabactin synthesis enzyme (Irp3)
iron aquisition yersiniabactin synthesis enzyme (YbtT,resembles thioesterases)
Iron-binding ferritin-like antioxidant protein
Iron binding protein IscA for iron-sulfur cluster assembly
Iron binding protein SufA for iron-sulfur cluster assembly
iron-chelator utilization protein
Iron compound ABC uptake transporter ATP-binding protein
Iron compound ABC uptake transporter ATP-binding protein PiaD
Iron compound ABC uptake transporter ATP-binding protein PiuD
Iron compound ABC uptake transporter permease protein
Iron compound ABC uptake transporter permease protein PiaB
Iron compound ABC uptake transporter permease protein PiaC
Iron compound ABC uptake transporter permease protein PiuB
Iron compound ABC uptake transporter permease protein PiuC
Iron compound ABC uptake transporter substrate-binding protein
Iron compound ABC uptake transporter substrate-binding protein PiaA
Iron compound ABC uptake transporter substrate-binding protein PiuA
Iron-dependent repressor IdeR/DtxR
Iron (II) and Manganese ABC transporter, ATP-binding component
Iron (II) and Manganese ABC transporter, inner membrane component
Iron (II) and Manganese ABC transporter, Inner membrane permease
Iron (II) and Manganese ABC transporter, periplasmic-binding protein
Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1)
Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1)
Iron(III) dicitrate transport system permease protein fecC (TC 3.A.1.14.1)
Iron(III) dicitrate transport system permease protein fecD (TC 3.A.1.14.1)
Iron-regulated protein A precursor
Iron-regulated virulence regulatory protein irgB
Iron-responsive regulator Irr
Iron-responsive repressor RirA
Iron-sulfur cluster assembly ATPase protein SufC
Iron-sulfur cluster assembly protein SufB
Iron-sulfur cluster assembly protein SufD
Iron-sulfur cluster assembly scaffold protein IscU
Iron-sulfur cluster assembly scaffold protein NifU
Iron-sulfur cluster regulator IscR
Iron-sulfur cluster regulator SufR
Iron-sulfur protein clustered with CO dehydrogenase/acetyl-CoA synthase
Iron-uptake factor PiuB
Iron-uptake factor PiuC
Isoaspartyl aminopeptidase
Isoaspartyl dipeptidase (EC 3.4.19.5)
isobutyryl-CoA dehydrogenase
Isochorismatase (EC 3.3.2.1)
Isochorismatase (EC 3.3.2.1) of siderophore biosynthesis
Isochorismate pyruvate-lyase (EC 4.-.-.-)
Isochorismate pyruvate-lyase of siderophore biosynthesis
Isochorismate synthase (EC 5.4.4.2)
Isochorismate synthase (EC 5.4.4.2) of siderophore biosynthesis
Isocitrate dehydrogenase 3 subunit alpha, mitochondrial precursor (EC 1.1.1.41)
Isocitrate dehydrogenase 3 subunit beta, mitochondrial precursor (EC 1.1.1.41)
Isocitrate dehydrogenase 3 subunit gamma, mitochondrial precursor (EC 1.1.1.41)
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Isocitrate dehydrogenase [NAD] subunit II, mitochondrial precursor (EC 1.1.1.41)
Isocitrate dehydrogenase [NAD] subunit I, mitochondrial precursor (EC 1.1.1.41)
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Isocitrate lyase (EC 4.1.3.1)
Isoflavone reductase homolog P3 (EC 1.3.1.-)
isoflavone reductase, putative
Isohexenylglutaconyl-CoA hydratase
Isoleucyl-tRNA synthetase (EC 6.1.1.5)
Isoleucyl-tRNA synthetase (EC 6.1.1.5), mitochondrial
Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)
Isopentenyl phosphate kinase
Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)
Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
ISPsy4, transposase
ISPsy4, transposition helper protein
Kappa-fimbriae chaperone protein
Kappa-fimbriae major subunit
Kappa-fimbriae probable subunit
Kappa-fimbriae regulatory protein
Kappa-fimbriae usher protein
KdpE
Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)
Kef-type transport system 2 (probable substrate potassium), subunit 1
Kef-type transport system 2 (probable substrate potassium), subunit 2
Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)
Ketoisovalerate oxidoreductase subunit (EC 1.2.7.7)
Ketoisovalerate oxidoreductase subunit VorA (EC 1.2.7.7)
Ketoisovalerate oxidoreductase subunit VorB (EC 1.2.7.7)
Ketoisovalerate oxidoreductase subunit VorC (EC 1.2.7.7)
Ketoisovalerate oxidoreductase subunit VorD (EC 1.2.7.7)
Ketoisovalerate oxidoreductase subunit VorG (EC 1.2.7.7)
Ketol-acid reductoisomerase (EC 1.1.1.86)
KH domain RNA binding protein YlqC
Ku domain protein
Kup system potassium uptake protein
Kynureninase (EC 3.7.1.3)
Kynurenine 3-monooxygenase (EC 1.14.13.9)
Kynurenine formamidase, bacterial (EC 3.5.1.9)
Kynurenine formamidase (EC 3.5.1.9)
Kynurenine formamidase, yeast-type BNA7 (EC 3.5.1.9)
L-2,4-diaminobutyric acid acetyltransferase (EC 2.3.1.-)
L-2-amino-thiazoline-4-carboxylic acid hydrolase (EC 3.5.2.-)
L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43)
Lactacin F ABC transporter permease component
Lactacin F immunity protein
Lactacin F transporter auxillary protein
Lactacin F two-component system response regulator
Lactacin F two-component system sensor histidine kinase
Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22)
Lactaldehyde reductase (EC 1.1.1.77)
Lactam utilization protein LAMB
Lactate 2-monooxygenase (EC 1.13.12.4)
Lactate-responsive regulator LldR in Actinobacteria, GntR family
Lactate-responsive regulator LldR in Betaproteobacteria, LysR family
Lactate-responsive regulator LldR in Enterobacteria, GntR family
Lactate-responsive regulator LldR in Firmicutes, GntR family
Lactobacillus delbrueckii phage mv4 main capsid protein Gp34 homolog lin2390
Lacto-N-biose phosphorylase (EC 2.4.1.211)
Lactose and galactose permease, GPH translocator family
Lactose permease
Lactose phosphotransferase system repressor
Lactoylglutathione lyase (EC 4.4.1.5)
Lactyl (2) diphospho-(5')guanosine:7,8-didemethyl-8-hydroxy-5-deazariboflavin 2-phospho-L-lactate transferase
L-alanine-DL-glutamate epimerase
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44)
L-allo-threonine aldolase
L-allo-threonine aldolase (EC 2.1.2.1)
L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31)
L-aminoadipate-semialdehyde dehydrogenase small subunit (EC 1.2.1.31)
L-arabinolactonase (EC 3.1.1.15)
L-arabinose 1-dehydrogenase (EC 1.1.1.46)
L-arabinose-binding periplasmic protein precursor araF (TC 3.A.1.2.2)
L-arabinose isomerase (EC 5.3.1.4)
L-arabinose-specific 1-epimerase (mutarotase)
L-arabinose transport ATP-binding protein araG (TC 3.A.1.2.2)
L-arabinose transport system permease protein (TC 3.A.1.2.2)
L-arabonate dehydratase (EC 4.2.1.25)
Large-conductance mechanosensitive channel
Large subunit naph/bph dioxygenase
L-ascorbate oxidase precursor (EC 1.10.3.3)
L-asparaginase (EC 3.5.1.1)
L-Aspartate dehydrogenase (EC 1.4.1.21)
L-aspartate oxidase (EC 1.4.3.16)
late competence protein B.cereus like ComG6, access of DNA to ComEA
late competence protein B.cereus like ComG7, access of DNA to ComEA
Late competence protein ComC, processing protease
Late competence protein ComEA, DNA receptor
Late competence protein ComEB
Late competence protein ComEC, DNA transport
Late competence protein ComER, proline oxidase (EC 1.5.1.2)
Late competence protein ComGA, access of DNA to ComEA
Late competence protein ComGB, access of DNA to ComEA
late competence protein ComGC, access of DNA to ComEA
Late competence protein ComGC, access of DNA to ComEA, FIG007487
late competence protein ComGD, access of DNA to ComEA
Late competence protein ComGD, access of DNA to ComEA, FIG012777
Late competence protein ComGD, access of DNA to ComEA, FIG038316
late competence protein ComGE, access of DNA to ComEA
Late competence protein ComGE, FIG015513
Late competence protein ComGE, FIG015564
Late competence protein ComGE, FIG018915
Late competence protein ComGE, FIG075573
late competence protein ComGF, access of DNA to ComEA
Late competence protein ComGF, access of DNA to ComEA, FIG012620
Late competence protein ComGF, access of DNA to ComEA, FIG017774
late competence protein ComGG, access of DNA to ComEA
Late competence protein ComGG, FIG007920
Late competence protein ComGG, FIG028917
Late competence protein ComGG, FIG068335
Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase)
L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)
L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)
L-carnitine dehydratase (EC:4.2.1.89)
L-carnitine/gamma-butyrobetaine antiporter
L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC
Leader peptidase (Prepilin peptidase) (EC 3.4.23.43)
L-ectoine synthase (EC 4.2.1.-)
Legionaminic acid biosynthesis protein PtmA
Legionaminic acid biosynthesis protein PtmF
Legionaminic acid biosynthesis protein PtmG
Legionaminic acid cytidylyltransferase (EC 2.7.7.43)
Legionaminic acid synthase (EC 2.5.1.56)
Leucine dehydrogenase (EC 1.4.1.9)
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
Leucoanthocyanidin dioxygenase (EC 1.14.11.19)
Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)
Leucyl-tRNA synthetase (EC 6.1.1.4)
Leucyl-tRNA synthetase (EC 6.1.1.4), mitochondrial
Leukotoxin LukD
Leukotoxin LukE
Leu operon leader peptide
Levanase (EC 3.2.1.65)
Levansucrase (EC 2.4.1.10)
L-fuco-beta-pyranose dehydrogenase
L-fuconate dehydratase (EC 4.2.1.68)
L-fuconolactone hydrolase
L-fucose isomerase (EC 5.3.1.25)
L-fucose mutarotase
L-fucose operon activator
L-fuculokinase (EC 2.7.1.51)
L-fuculose phosphate aldolase (EC 4.1.2.17)
L-idonate 5-dehydrogenase (EC 1.1.1.264)
L-idonate, D-gluconate, 5-keto-D-gluconate transporter
Light dependent period modulator LdpA
Light-dependent protochlorophyllide reductase (EC 1.3.1.33)
Light-harvesting LHI, alpha subunit
Light-harvesting LHI, beta subunit
Light-harvesting LHII, alpha subunit A
Light-harvesting LHII, alpha subunit B
Light-harvesting LHII, alpha subunit C
Light-harvesting LHII, alpha subunit D
Light-harvesting LHII, alpha subunit E
Light-harvesting LHII, alpha subunit F
Light-harvesting LHII, alpha subunit G
Light-harvesting LHII, beta subunit A
Light-harvesting LHII, beta subunit B
Light-harvesting LHII, beta subunit C
Light-harvesting LHII, beta subunit D
Light-harvesting LHII, beta subunit E
Light-harvesting LHII, beta subunit F
Light-harvesting LHII, beta subunit G
Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL (EC 1.18.-.-)
Light-independent protochlorophyllide reductase subunit B (EC 1.18.-.-)
Light-independent protochlorophyllide reductase subunit N (EC 1.18.-.-)
lignostilbene-alpha,beta-dioxygenase
Lignostilbene-alpha,beta-dioxygenase and related enzymes
Lin1875 protein
Lipase activator protein, Lipase-specific foldase
Lipase/Acylhydrolase with GDSL-like motif
Lipase precursor (EC 3.1.1.3)
Lipid A acylation protein PagP, palmitoyltransferase
Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-)
Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)
Lipid-A-disaccharide synthase (EC 2.4.1.182)
Lipid A export ATP-binding/permease protein MsbA
Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)
Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-)
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.-)
Lipoate-protein ligase A
Lipoate-protein ligase A, C-terminal 70 percent
Lipoate-protein ligase A, N-terminal 30 percent
Lipoate synthase
Lipoate synthase, cyanobacterial paralog
Lipocalin-related protein and Bos/Can/Equ allergen
Lipopolysaccharide 1,2-N-acetylglucosaminetransferase (EC 2.4.1.56)
Lipopolysaccharide 1,6-galactosyltransferase (EC 2.4.1.-)
Lipopolysaccharide ABC transporter, ATP-binding protein LptB
Lipopolysaccharide biosynthesis glycosyltransferase
lipopolysaccharide biosynthesis protein, putative
Lipopolysaccharide biosynthesis protein wzxC
Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-)
Lipopolysaccharide cholinephosphotransferase LicD2 (EC 2.7.8.-)
Lipopolysaccharide cholinephosphotransferase LicD3 (EC 2.7.8.-)
Lipopolysaccharide core biosynthesis glycosyltransferase, group 2 family protein (EC 2.4.1.-)
Lipopolysaccharide core biosynthesis protein RfaY
Lipopolysaccharide core biosynthesis protein RfaZ
Lipopolysaccharide core biosynthesis protein WaaP (EC 2.7.-.-), heptosyl-I-kinase
Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-)
Lipopolysaccharide heptosyltransferase III (EC 2.4.1.-)
Lipopolysaccharide synthesis protein WavD
Lipopolysaccharide synthesis protein WavE
lipoprotein B
Lipoprotein NlpD precursor
Lipoprotein of type IV secretion complex that spans outer membrane and periplasm (VirB7)
Lipoprotein releasing system ATP-binding protein LolD
Lipoprotein releasing system transmembrane protein LolC
Lipoprotein releasing system transmembrane protein LolE
Lipoprotein signal peptidase (EC 3.4.23.36)
Lipoxygenase, chloroplast precursor (EC 1.13.11.12)
Lipoxygenase (EC 1.13.11.12)
L-lactate dehydrogenase (EC 1.1.1.27)
L-lactate dehydrogenase (EC 1.1.2.3)
L-lactate permease
L,L-diaminopimelate aminotransferase (EC 2.6.1.83)
LL-diaminopimelate aminotransferase, predicted alternative
L-lysine aminomutase regulator
L-lysine permease
Lmo0065 homolog within ESAT-6 gene cluster
Lmo0066 homolog within ESAT-6 gene cluster, similarity to ADP-ribosylating toxins
Lmo0069 homolog within ESAT-6 gene cluster
Lmo0312 protein
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Long-chain-fatty-acid--luciferin-component ligase (EC 6.2.1.19)
Long-chain fatty acid transport protein
Lon-like protease with PDZ domain
L-ornithine 5-monooxygenase (EC 1.13.12.-), PvdA of pyoverdin biosynthesis
Low-affinity CO2 hydration protein CphX
Low-affinity gluconate/H+ symporter GntU
Low-affinity inorganic phosphate transporter
Low G+C gram positive nudix hydrolase YtkD (EC 3.6.-.-)
Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)
Low molecular weight protein-tyrosine-phosphatase Wzb (EC 3.1.3.48)
low-specificity D-threonine aldolase
Low-specificity L-threonine aldolase (EC 4.1.2.5)
Low temperature requirement B protein
Low temperature requirement C protein
L-pipecolate dehydrogenase (EC 1.5.99.3)
L-pipecolate oxidase (1.5.3.7)
LppC putative lipoprotein
L-proline Glycine Betaine ABC transport ATP-binding protein proV (TC 3.A.1.12.1)
L-proline Glycine Betaine ABC transport system permease protein proW (TC 3.A.1.12.1)
L-proline glycine betaine binding ABC transporter protein proX (TC 3.A.1.12.1)
L-Proline/Glycine betaine transporter ProP
LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)
LptA, protein essential for LPS transport across the periplasm
LPXTG specific sortase A
LrgA-associated membrane protein LrgB
L-rhamnose isomerase (EC 5.3.1.14)
L-rhamnose mutarotase
L-rhamnose operon regulatory protein rhaS
L-rhamnose operon transcriptional activator rhaR
L-rhamnose-proton symporter
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
L-serine dehydratase 1 (EC 4.3.1.17)
L-serine dehydratase, alpha subunit (EC 4.3.1.17)
L-serine dehydratase, beta subunit (EC 4.3.1.17)
L-serine dehydratase (EC 4.3.1.17)
L-seryl-tRNA(Sec) kinase
L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)
L-sorbose 1-phosphate reductase (EC 1.1.1.-)
LsrR, transcriptional repressor of lsr operon
LSU m3Psi1915 methyltransferase RlmH
LSU m5C1962 methyltransferase RlmI
LSU ribosomal protein L10Ae (L1p)
LSU ribosomal protein L10e (L16p)
LSU ribosomal protein L10p (P0)
LSU ribosomal protein L10p (P0), chloroplast
LSU ribosomal protein L10p (P0), mitochondrial
LSU ribosomal protein L11e (L5p)
LSU ribosomal protein L11p (L12e)
LSU ribosomal protein L11p (L12e), chloroplast
LSU ribosomal protein L11p (L12e), mitochondrial
LSU ribosomal protein L12a (P1/P2)
LSU ribosomal protein L12e (L11p)
LSU ribosomal protein L13Ae (L13p)
LSU ribosomal protein L13e
LSU ribosomal protein L13p (L13Ae)
LSU ribosomal protein L13p (L13Ae), chloroplast
LSU ribosomal protein L13p (L13Ae), mitochondrial
LSU ribosomal protein L14e
LSU ribosomal protein L14p (L23e)
LSU ribosomal protein L14p (L23e), chloroplast
LSU ribosomal protein L14p (L23e), mitochondrial
LSU ribosomal protein L15e
LSU ribosomal protein L15p (L27Ae)
LSU ribosomal protein L15p (L27Ae), chloroplast
LSU ribosomal protein L15p (L27Ae), mitochondrial
LSU ribosomal protein L16p (L10e)
LSU ribosomal protein L16p (L10e), chloroplast
LSU ribosomal protein L16p (L10e), mitochondrial
LSU ribosomal protein L17e (L22p)
LSU ribosomal protein L17p
LSU ribosomal protein L17p, chloroplast
LSU ribosomal protein L17p, mitochondrial
LSU ribosomal protein L18Ae
LSU ribosomal protein L18e
LSU ribosomal protein L18p (L5e)
LSU ribosomal protein L18p (L5e), chloroplast
LSU ribosomal protein L18p (L5e), mitochondrial
LSU ribosomal protein L19e
LSU ribosomal protein L19p
LSU ribosomal protein L19p, chloroplast
LSU ribosomal protein L19p, mitochondrial
LSU ribosomal protein L1e (L4p)
LSU ribosomal protein L1p (L10Ae)
LSU ribosomal protein L1p (L10Ae), chloroplast
LSU ribosomal protein L1p (L10Ae), mitochondrial
LSU ribosomal protein L20p
LSU ribosomal protein L20p, chloroplast
LSU ribosomal protein L20p, mitochondrial
LSU ribosomal protein L21e
LSU ribosomal protein L21p
LSU ribosomal protein L21p, chloroplast
LSU ribosomal protein L21p, mitochondrial
LSU ribosomal protein L22e
LSU ribosomal protein L22p (L17e)
LSU ribosomal protein L22p (L17e), chloroplast
LSU ribosomal protein L22p (L17e), mitochondrial
LSU ribosomal protein L23Ae (L23p)
LSU ribosomal protein L23e (L14p)
LSU ribosomal protein L23p (L23Ae)
LSU ribosomal protein L23p (L23Ae), chloroplast
LSU ribosomal protein L23p (L23Ae), mitochondrial
LSU ribosomal protein L24e
LSU ribosomal protein L24p (L26e)
LSU ribosomal protein L24p (L26e), chloroplast
LSU ribosomal protein L24p (L26e), mitochondrial
LSU ribosomal protein L25p
LSU ribosomal protein L25p, mitochondrial
LSU ribosomal protein L26e (L24p)
LSU ribosomal protein L27Ae (L15p)
LSU ribosomal protein L27e
LSU ribosomal protein L27p
LSU ribosomal protein L27p, chloroplast
LSU ribosomal protein L27p, mitochondrial
LSU ribosomal protein L28e
LSU ribosomal protein L28p
LSU ribosomal protein L28p, chloroplast
LSU ribosomal protein L28p, mitochondrial
LSU ribosomal protein L29e
LSU ribosomal protein L29p (L35e)
LSU ribosomal protein L29p (L35e), chloroplast
LSU ribosomal protein L2p (L8e)
LSU ribosomal protein L2p (L8e), chloroplast
LSU ribosomal protein L2p (L8e), mitochondrial
LSU ribosomal protein L30e
LSU ribosomal protein L30p (L7e)
LSU ribosomal protein L30p (L7e), mitochondrial
LSU ribosomal protein L31e
LSU ribosomal protein L31p
LSU ribosomal protein L31p, chloroplast
LSU ribosomal protein L31p, mitochondrial
LSU ribosomal protein L32e
LSU ribosomal protein L32p
LSU ribosomal protein L32p, chloroplast
LSU ribosomal protein L32p, mitochondrial
LSU ribosomal protein L33p
LSU ribosomal protein L33p, chloroplast
LSU ribosomal protein L33p, mitochondrial
LSU ribosomal protein L34e
LSU ribosomal protein L34p
LSU ribosomal protein L34p, chloroplast
LSU ribosomal protein L34p, mitochondrial
LSU ribosomal protein L35Ae
LSU ribosomal protein L35e (L29p)
LSU ribosomal protein L35p
LSU ribosomal protein L35p, chloroplast
LSU ribosomal protein L36e
LSU ribosomal protein L36p
LSU ribosomal protein L36p, chloroplast
LSU ribosomal protein L36p, mitochondrial
LSU ribosomal protein L37Ae
LSU ribosomal protein L37e
LSU ribosomal protein L37mt, mitochondrial
LSU ribosomal protein L38e
LSU ribosomal protein L38mt, mitochondrial
LSU ribosomal protein L39e
LSU ribosomal protein L39mt, mitochondrial
LSU ribosomal protein L3e (L3p)
LSU ribosomal protein L3p (L3e)
LSU ribosomal protein L3p (L3e), chloroplast
LSU ribosomal protein L3p (L3e), mitochondrial
LSU ribosomal protein L40e
LSU ribosomal protein L40mt, mitochondrial
LSU ribosomal protein L41e
LSU ribosomal protein L41mt, mitochondrial
LSU ribosomal protein L42mt, mitochondrial
LSU ribosomal protein L43mt, mitochondrial
LSU ribosomal protein L44e
LSU ribosomal protein L44mt, mitochondrial
LSU ribosomal protein L45mt, mitochondrial
LSU ribosomal protein L46mt, mitochondrial
LSU ribosomal protein L47mt, mitochondrial
LSU ribosomal protein L48mt, mitochondrial
LSU ribosomal protein L49mt, mitochondrial
LSU ribosomal protein L4p (L1e)
LSU ribosomal protein L4p (L1e), chloroplast
LSU ribosomal protein L4p (L1e), mitochondrial
LSU ribosomal protein L50mt, mitochondrial
LSU ribosomal protein L51mt, mitochondrial
LSU ribosomal protein L52mt, mitochondrial
LSU ribosomal protein L53mt, mitochondrial
LSU ribosomal protein L54mt, mitochondrial
LSU ribosomal protein L55mt, mitochondrial
LSU ribosomal protein L5e (L18p)
LSU ribosomal protein L5p (L11e)
LSU ribosomal protein L5p (L11e), chloroplast
LSU ribosomal protein L5p (L11e), mitochondrial
LSU ribosomal protein L6e
LSU ribosomal protein L6p (L9e)
LSU ribosomal protein L6p (L9e), chloroplast
LSU ribosomal protein L6p (L9e), mitochondrial
LSU ribosomal protein L7Ae
LSU ribosomal protein L7e (L30p)
LSU ribosomal protein L7/L12 (L23e)
LSU ribosomal protein L7/L12 (L23e), chloroplast
LSU ribosomal protein L7/L12 (L23e), mitochondrial
LSU ribosomal protein L8e (L2p)
LSU ribosomal protein L9e (L6p)
LSU ribosomal protein L9p
LSU ribosomal protein L9p, chloroplast
LSU ribosomal protein L9p, mitochondrial
LSU ribosomal protein MRP51, mitochondrial
LSU ribosomal protein MRPL13, mitochondrial
LSU ribosomal protein MRPL15, mitochondrial
LSU ribosomal protein MRPL20, mitochondrial
LSU ribosomal protein MRPL25, mitochondrial
LSU ribosomal protein MRPL31, mitochondrial
LSU ribosomal protein MRPL35, mitochondrial
LSU ribosomal protein P0 (L10p)
LSU ribosomal protein P1
LSU ribosomal protein P2
LSU rRNA
L-threonine 3-dehydrogenase (EC 1.1.1.103)
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
L-threonine transporter, anaerobically inducible
Lumazine protein, riboflavin synthase homolog
LuxA, luciferase alpha chain (EC 1.14.14.3)
LuxB, luciferase beta chain (EC 1.14.14.3)
LuxC, acyl-CoA reductase (EC 1.2.1.50)
LuxD. acyl transferase (EC 2.3.1.-)
LuxE, long-chain-fatty-acid ligase (EC 6.2.1.19)
LuxG, NAD(P)H-dependent FMN reductase (EC 1.5.1.29)
L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-)
L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)
L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) homolog
Lycopene beta cyclase (EC 1.14.-.-)
Lycopene cyclase
Lycopene cyclase, CruA type
Lycopene elongase (EC 2.5.1.-)
Lycopene epsilon cyclase
Lysine 2,3-aminomutase (EC 5.4.3.2)
Lysine 2-monooxygenase (EC 1.13.12.2)
Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)
Lysine biosynthesis protein LysX
Lysine/cadaverine antiporter membrane protein CadB
Lysine decarboxylase 2, constitutive (EC 4.1.1.18)
Lysine decarboxylase (EC 4.1.1.18)
Lysine decarboxylase, inducible (EC 4.1.1.18)
Lysine efflux permease
Lysine ketoglutarate reductase (EC 1.5.1.8) (LOR) (LKR)
Lysine-specific permease
Lysophospholipase (EC 3.1.1.5)
Lysophospholipase L2 (EC 3.1.1.5)
LysR family regulatory protein CidR
LysR-family transcriptional regulator clustered with PA0057
LysR family transcriptional regulator lrhA
LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase
LysR family transcriptional regulator PA0133
LysR family transcriptional regulator PA0191
LysR family transcriptional regulator PA0739
LysR family transcriptional regulator PA1145
LysR family transcriptional regulator PA2758
LysR family transcriptional regulator PA2877
LysR family transcriptional regulator PA3398
LysR family transcriptional regulator PA4989
LysR family transcriptional regulator PA5218
LysR family transcriptional regulator PA5437
LysR family transcriptional regulator STM2281
LysR family transcriptional regulator STM3121
LysR family transcriptional regulator YbbS
LysR family transcriptional regulator YbhD
LysR family transcriptional regulator YcjZ
LysR family transcriptional regulator YdcI
LysR family transcriptional regulator YeiE
LysR family transcriptional regulator YfeR
LysR family transcriptional regulator YfiE
LysR-family transcriptional regulator YhaJ
LysR family transcriptional regulator YhjC
LysR family transcriptional regulator YneJ
LysR family transcriptional regulator YnfL
LysR-type transcriptional regulator for nopaline catabolism NocR
Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)
Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)
Lysyl-tRNA synthetase (class II) (EC 6.1.1.6), mitochondrial
LytH protein involved in methicillin resistance
Lytic enzyme, amidase [SA bacteriophages 11, Mu50B]
Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)
Macrolide-specific efflux protein MacA
macromolecule metabolism
macromolecule synthesis, modification
Macrophage infectivity potentiator/GldI
Magnesium and cobalt efflux protein CorC
Magnesium and cobalt transport protein CorA
Main regulator of heterocyst differentiation HetR
Major capsid protein [Bacteriophage A118]
Major cell-binding factor precursor PebA
Major curlin subunit precursor CsgA
Major facilitator superfamily (MFS) transporter
Major facilitator superfamily (MFS) transporter in predicted poly-gamma-glutamate synthase operon
Major myo-inositol transporter IolT
Major pilus subunit of type IV secretion complex (VirB2)
Major pilus subunit of type IV secretion complex, VirB2
Major tail shaft protein [Bacteriophage A118]
Malate dehydrogenase (EC 1.1.1.37)
Malate Na(+) symporter
Malate permease
Malate:quinone oxidoreductase (EC 1.1.99.16)
Malate synthase (EC 2.3.3.9)
Malate synthase G (EC 2.3.3.9)
Malate synthase-related protein
Maleate cis-trans isomerase (EC 5.2.1.1)
Maleylacetoacetate isomerase (EC 5.2.1.2)
Maleylpyruvate isomerase, mycothiol-dependent (EC 5.2.1.4)
Malolactic enzyme (EC 1.-.-.-)
Malolactic regulator
Malonate decarboxylase alpha subunit
Malonate decarboxylase beta subunit
Malonate decarboxylase delta subunit
Malonate decarboxylase gamma subunit
Malonate transporter, MadL subunit
Malonate transporter, MadM subunit
Malonate utilization transcriptional regulator
Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)
Maltodextrin glucosidase (EC 3.2.1.20)
Maltodextrin phosphorylase (EC 2.4.1.1)
Maltodextrose utilization protein MalA
Malto-oligosyltrehalose synthase (EC 5.4.99.15)
Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)
Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)
Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
Maltose/maltodextrin ABC transporter, permease protein MalF
Maltose/maltodextrin ABC transporter, permease protein MalG
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE
Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)
Maltose O-acetyltransferase (EC 2.3.1.79)
Maltose operon periplasmic protein MalM
Maltose operon transcriptional repressor MalR, LacI family
Maltose phosphorylase (EC 2.4.1.8)
Maltose regulon modulator
Maltose regulon regulatory protein MalI (repressor for malXY)
Malyl-CoA lyase (EC 4.1.3.24)
mandelate racemase/muconate lactonizing enzyme family protein
Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
Manganese-dependent protein-tyrosine phosphatase (EC 3.1.3.48)
Manganese superoxide dismutase (EC 1.15.1.1)
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
Mannitol operon activator, BglG family
Mannitol operon repressor
Mannonate dehydratase (EC 4.2.1.8)
Mannopine transporter ATP-binding protein MotB
Mannopine transporter periplasmic substrate-binding protein MotA
Mannopine transporter permease protein MotC
Mannopine transporter permease protein MotD
Mannopinic acid transporter ATP-binding protein MoaD
Mannopinic acid transporter periplasmic substrate-binding protein MoaA
Mannopinic acid transporter permease protein MoaB
Mannopinic acid transporter permease protein MoaC
Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )
Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)
Mannose-6-phosphate isomerase (EC 5.3.1.8)
mannose-specific adhesin FimH
Mannosides-regulated TonB-dependent outer membrane receptor
Mannosyltransferase OCH1 and related enzymes
MaoC domain protein dehydratase
MaoC-like dehydratase
match to protein family HMM PF06676
Matrix metallopeptidase-2
MazG protein domain
MdtR transcriptional regulator, MarR family
Meiosis-specific DNA cleavage protein SPO11
Melibiose carrier protein, Na+/melibiose symporter
Melibiose operon regulatory protein
Membrane alanine aminopeptidase N (EC 3.4.11.2)
Membrane-associated zinc metalloprotease
Membrane-attached cytochrome c550
Membrane-bound lysozyme inhibitor of c-type lysozyme
Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)
Membrane-bound lytic murein transglycosylase B (EC 3.2.1.-)
Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)
Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-)
Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)
Membrane-bound lytic murein transglycosylase E (EC 3.2.1.-)
Membrane component of multidrug resistance system
membrane c-type cytochrome cy
membrane docking protein
Membrane fusion component of tripartite multidrug resistance system
Membrane fusion protein of RND family multidrug efflux pump
Membrane lipoprotein lipid attachment site containing protein USSDB6D
Membrane protein associated with methylmalonyl-CoA decarboxylase
Membrane protein associated with oxaloacetate decarboxylase
Membrane protein CarB involved in the export of O-antigen and teichoic acid, Streptococci specific
Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog
Membrane protein DUF2324 in 2-Ketogluconate Utilization cluster
Membrane Protein Functionally coupled to the MukBEF Chromosome Partitioning Mechanism
membrane protein, inferred for ABFAE pathway
Membrane proteins related to metalloendopeptidases
Membrane protein, suppressor for copper-sensitivity ScsB
Membrane protein, suppressor for copper-sensitivity ScsD
Membrane protein SypL involved in exopolysaccharide production
Membrane protein YciC, linked to IspA
Membrane transporter HdeD, H-NS repressed
Membrane-type matrix metallopeptidase-1
Menaquinone-cytochrome C oxidoreductase, cytochrome C subunit
Menaquinone-cytochrome c reductase, cytochrome B subunit
Menaquinone-cytochrome C reductase iron-sulfur subunit
Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
Menaquinone via futalosine step 1
Menaquinone via futalosine step 2
Menaquinone via futalosine step 2, possible alternative
Menaquinone via futalosine step 3
Menaquinone via futalosine step 4
Mercuric ion reductase (EC:1.16.1.1)
Mercuric reductase (EC 1.16.1.1)
Mercuric resistance operon coregulator
Mercuric resistance operon regulatory protein
Mercuric transport protein, MerC
Mercuric transport protein, MerE
Mercuric transport protein, MerT
Mesaconyl-CoA hydratase
Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)
Metal-dependent hydrolase COG0491 with rhodanese-homology domain (RHOD)
Metal-dependent hydrolase involved in phosphonate metabolism
Metal-dependent hydrolases of the beta-lactamase superfamily I
Metal-dependent hydrolases of the beta-lactamase superfamily II
Metal-dependent hydrolases of the beta-lactamase superfamily III
Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein
Metallo-beta-lactamase family protein, RNA-specific
Metallo-beta-lactamase superfamily domain protein in prophage
Metallo-beta-lactamase superfamily protein PA0057
Metalloprotease Eep, required for pheromone maturation
Metalloprotease, putative zinc-binding domain
Metallothionein
Methanol:corrinoid methyltransferase
Methanol dehydrogenase large subunit protein (EC 1.1.99.8)
Methanol methyltransferase corrinoid protein
Methanophenazine hydrogenase cytochrome b subunit (EC 1.12.98.3)
Methanophenazine hydrogenase large subunit (EC 1.12.98.3)
Methanophenazine hydrogenase maturation protease (EC 3.4.24.-)
Methanophenazine hydrogenase small subunit precursor (EC 1.12.98.3)
Methenyltetrahydrofolate cyclohydrolase
Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)
Methicillin resistance regulatory sensor-transducer MecR1
Methicillin resistance regulatory sensor-transducer MecR1, truncated
Methicillin resistance repressor MecI
Methionine ABC transporter ATP-binding protein
Methionine ABC transporter permease protein
Methionine ABC transporter substrate-binding protein
Methionine aminopeptidase (EC 3.4.11.18)
Methionine gamma-lyase (EC 4.4.1.11)
Methionine repressor MetJ
Methionine synthase activation domain (EC 2.1.1.13)
Methionine transporter MetT
Methionyl-tRNA formyltransferase (EC 2.1.2.9)
Methionyl-tRNA synthetase (EC 6.1.1.10)
Methionyl-tRNA synthetase (EC 6.1.1.10), mitochondrial
Methoxyneurosporene dehydrogenase (EC 1.14.99.-)
Methyl-accepting chemotaxis protein, hemolysin secretion protein HylB
Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein)
Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein)
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
Methyl-accepting chemotaxis protein IV (dipeptide chemoreceptor protein)
Methylamine dehydrogenase heavy chain precursor (EC 1.4.99.3)
Methylamine dehydrogenase light chain precursor (EC 1.4.99.3)
Methylamine operon regulatory protein
Methylamine utilization protein MauD
Methylamine utilization protein MauE
Methylase of polypeptide chain release factors
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)
Methylcobalamin:coenzyme M methyltransferase, methanol-specific
Methylcobalamin:coenzyme M methyltransferase, methylamine-specific
Methyl coenzyme M reductase alpha subunit (EC 2.8.4.1)
Methyl coenzyme M reductase associated protein
Methyl coenzyme M reductase beta subunit (EC 2.8.4.1)
Methyl coenzyme M reductase gamma subunit (EC 2.8.4.1)
Methyl coenzyme M reductase I alpha subunit (EC 2.8.4.1)
Methyl coenzyme M reductase I beta subunit (EC 2.8.4.1)
Methyl coenzyme M reductase I gamma subunit (EC 2.8.4.1)
Methyl coenzyme M reductase II alpha subunit (EC 2.8.4.1)
Methyl coenzyme M reductase II beta subunit (EC 2.8.4.1)
Methyl coenzyme M reductase II gamma subunit (EC 2.8.4.1)
Methyl coenzyme M reductase operon protein C
Methyl coenzyme M reductase operon protein D
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)
Methylenetetrahydrofolate dehydrogenase
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)
Methylene tetrahydromethanopterin dehydrogenase (EC 1.5.99.9)
Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Methylglyoxal synthase (EC 4.2.3.3)
Methylisocitrate lyase (EC 4.1.3.30)
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)
Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)
Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)
Methylmalonyl-CoA decarboxylase, gamma chain (EC 4.1.1.41)
Methylmalonyl-CoA epimerase (EC 5.1.99.1)
Methylmalonyl-CoA mutase (EC 5.4.99.2)
Methylmalonyl-CoA:Pyruvate transcarboxylase 12S subunit (EC 2.1.3.1)
Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit (EC 2.1.3.1)
Methylthioadenosine deaminase
Methylthiol:coenzyme M methyltransferase
Methylthiol:coenzyme M methyltransferase corrinoid protein
Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
Methylthioribulose-1-phosphate dehydratase related protein
Methyltransferase, anthrose biosynthesis
Methyltransferase (EC 2.1.1.-) colocalized with Q
Methyltransferase, FkbM family protein
Mevalonate kinase (EC 2.7.1.36)
MFS family multidrug transport protein, bicyclomycin resistance protein
MFS permease protein
MFS superfamily export protein YceL
MG(2+) CHELATASE FAMILY PROTEIN
Mg(2+) Citrate transporter (TC 2.A.11.1.1)
Mga-associated protein
Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator
Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic) (EC 1.14.13.81)
Mg-protoporphyrin IX monomethyl ester oxidative cyclase (anaerobic) (EC 1.14.13.81)
Mg-protoporphyrin O-methyltransferase (EC 2.1.1.11)
Mhp operon transcriptional activator
MiaB family protein, possibly involved in tRNA or rRNA modification
Microbial collagenase, secreted (EC 3.4.24.3)
Microsomal dipeptidase (EC 3.4.13.19)
Minor capsid protein [Bacteriophage A118]
Minor curlin subunit CsgB, nucleation component of curlin monomers
Minor myo-inositol transporter IolF
Minor pilin of type IV secretion complex (VirB5)
Minor pilin of type IV secretion complex, VirB5
Minor teichoic acid biosynthesis protein GgaA
Minor teichoic acid biosynthesis protein GgaB
Mitochondrial folate transporter/carrier
Mitochondrial processing peptidase-like protein (EC 3.4.24.64)
Mitogenic factor 2
Mitogenic factor 3
Mitogenic factor 4
MJ0209 homolog
Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon
Mll7752 protein
Mll9366 protein
Mlr0777 protein
Mlr0789 protein
Mlr7403 protein
MltA-interacting protein MipA
Modulator of drug activity B
Mo/Fe-nitrogenase-specific transcriptional regulator NifA
Molybdate-binding domain of ModE
Molybdenum ABC transporter, periplasmic molybdenum-binding protein modA (TC 3.A.1.8.1)
Molybdenum cofactor biosynthesis protein A
Molybdenum cofactor biosynthesis protein B
Molybdenum cofactor biosynthesis protein C
Molybdenum cofactor biosynthesis protein D
Molybdenum cofactor biosynthesis protein E
Molybdenum transport ATP-binding protein modC (TC 3.A.1.8.1)
Molybdenum transport protein, putative
Molybdenum transport system permease protein modB (TC 3.A.1.8.1)
Molybdopterin biosynthesis mog protein
Molybdopterin biosynthesis protein A
Molybdopterin biosynthesis protein B
Molybdopterin-guanine dinucleotide biosynthesis protein A
Molybdopterin-guanine dinucleotide biosynthesis protein B
Molybdopterin oxidoreductase (EC 1.2.7.-)
Molybdopterin oxidoreductase, iron-sulfur binding subunit (EC 1.2.7.-)
Molybdopterin oxidoreductase subunit, predicted
monoacylglycerol O-acyltransferase 1 (EC 2.3.1.22)
Monoamine oxidase (1.4.3.4)
Monoamine/putrescine oxidase (EC 1.4.3.10)
Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)
Monogalactosyldiacylglycerol synthase (EC 2.4.1.46)
Monogalactosyldiacylglycerol synthase precursor
Monoglyceride lipase (EC 3.1.1.23)
Monomethylamine:corrinoid methyltransferase
Monomethylamine methyltransferase corrinoid protein
Monomethylamine permease
MotA/TolQ/ExbB proton channel family protein
MotA/TolQ/ExbB proton channel family protein, probably associated with flagella
Motility accessory factor
Motility integral membrane protein
MoxR-like ATPase in aerotolerance operon
M protein trans-acting positive regulator (Mga)
MreB-like protein (Mbl protein)
MSHA biogenesis protein MshE
MSHA biogenesis protein MshF
MSHA biogenesis protein MshF2
MSHA biogenesis protein MshG
MSHA biogenesis protein MshH
MSHA biogenesis protein MshI
MSHA biogenesis protein MshJ
MSHA biogenesis protein MshK
MSHA biogenesis protein MshK2
MSHA biogenesis protein MshK3
MSHA biogenesis protein MshL
MSHA biogenesis protein MshM
MSHA biogenesis protein MshN
MSHA biogenesis protein MshO
MSHA biogenesis protein MshP
MSHA biogenesis protein MshQ
MSHA pilin protein MshA
MSHA pilin protein MshB
MSHA pilin protein MshC
MSHA pilin protein MshD
MSM (multiple sugar metabolism) operon regulatory protein
Mucin-desulfating sulfatase MdsA precursor (EC 3.1.6.14)
Muconate cycloisomerase (EC 5.5.1.1)
Muconolactone isomerase (EC 5.3.3.4)
Muconolactone isomerase (EC 5.3.3.4),putative
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
Multicopper oxidase
Multidrug efflux membrane fusion protein MexC
Multidrug efflux pump component MtrF
Multidrug efflux RND membrane fusion protein MexC
Multidrug efflux RND transporter MexD
Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1)
Multidrug efflux transporter MdtP
Multidrug efflux transporter MexD
Multidrug resistance protein [function not yet clear]
Multidrug resistance transporter, Bcr/CflA family
Multidrug transporter MdtB
Multidrug transporter MdtC
Multidrug transporter MdtD
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
Multiple antibiotic resistance protein MarA
Multiple antibiotic resistance protein MarB
Multiple antibiotic resistance protein MarC
Multiple antibiotic resistance protein MarR
Multiple polyol-specific dehydrogenase (EC 1.1.1.-)
Multiple sugar ABC transporter, ATP-binding protein
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
Multiple sugar ABC transporter, substrate-binding protein
Multiple sugar metabolism regulator
Multiple virulence factor regulator MvfR/PqsR
Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)
Murein-DD-endopeptidase (EC 3.4.99.-)
Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
MutS domain protein, family 2
MutS-related protein, family 1
MxiG protein
MxiH protein
MxiK protein
MxiN
Mycothiol S-conjugate amidase Mca
Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18)
Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
N-(3-hydroxybutanoyl)-L- homoserine lactone synthase LuxM
N-3-oxohexanoyl-L-homoserine lactone quorum-sensing transcriptional activator
N-3-oxohexanoyl-L-homoserine lactone synthase
N-3-oxooctanoyl-L-homoserine lactone synthase
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A (EC 2.1.1.86)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit B (EC 2.1.1.86)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C (EC 2.1.1.86)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D (EC 2.1.1.86)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit E (EC 2.1.1.86)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit F (EC 2.1.1.86)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G (EC 2.1.1.86)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H (EC 2.1.1.86)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit X
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27)
N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB
N-Acetyl-D-galactosamine permease, possible
N-Acetyl-D-glucosamine ABC transport system ATP-binding protein
N-Acetyl-D-glucosamine ABC transport system, permease protein 1
N-Acetyl-D-glucosamine ABC transport system, permease protein 2
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein
N-Acetyl-D-glucosamine permease 2, possible
N-Acetyl-D-glucosamine permease, possible
N-Acetyl-D-glucosamine utilization related protein, possible
N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
N-acetylgalactosamine-6-phosphate deacetylase, predicted alternative (EC 3.5.1.25)
N-acetylgalactosamine 6-sulfate sulfatase (GALNS)
N-acetyl-gamma-aminoadipyl-phosphate reductase (EC 1.2.1.-)
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)
N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic (EC 2.7.7.23)
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
N-acetylglucosamine regulated methyl-accepting chemotaxis protein
N-acetylglucosamine-regulated outer membrane porin
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
N-acetylglutamate synthase (EC 2.3.1.1)
N-acetylhexosamine 1-kinase
N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-)
N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
N-acetyl-lysine aminotransferase (EC 2.6.1.-)
N-acetyl-lysine deacetylase (EC 3.5.1.-)
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
N-acetylmannosamine kinase (EC 2.7.1.60)
N-acetylmannosaminyltransferase (EC 2.4.1.187)
N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD
N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43)
N-acetylneuraminate lyase (EC 4.1.3.3)
N-acetylneuraminate synthase (EC 2.5.1.56)
N-acetylneuraminic acid outer membrane channel protein NanC
N-acetylornithine carbamoyltransferase (EC 2.1.3.9)
N-Acetyltransferase PseH involved in the biosynthesis of pseudaminic acid
Na(+)Citrate OH(-) antiporter
N-acylamino acid racemase
N-acylglucosamine 2-epimerase (EC 5.1.3.8)
N-acyl-L-homoserine lactone synthetase LasI
N-acyl-L-homoserine lactone synthetase RhlL
NAD-dependent deacetylase
NAD-dependent deacetylase (EC 3.5.1.-)
NAD-dependent deacetylase sirtuin 1 (EC 3.5.1.-)
NAD-dependent deacetylase sirtuin-2 (EC 3.5.1.-)
NAD-dependent deacetylase sirtuin-3 (EC 3.5.1.-)
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase family protein
NAD-dependent formate dehydrogenase alpha subunit
NAD-dependent formate dehydrogenase beta subunit
NAD-dependent formate dehydrogenase delta subunit
NAD-dependent formate dehydrogenase (EC 1.2.1.2)
NAD-dependent formate dehydrogenase gamma subunit
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
NAD-dependent malic enzyme (EC 1.1.1.38)
NAD-dependent protein deacetylase of SIR2 family
NAD+-dependent sorbitol dehydrogenase (EC 1.1.1.14)
NAD(FAD)-utilizing dehydrogenase, sll0175 homolog
NADH dehydrogenase (EC 1.6.99.3)
NADH dehydrogenase (EC 1.6.99.3) in cluster with putative pheromone precursor
NADH dehydrogenase I subunit 4, Involved in photosystem-1 cyclic electron flow
NADH dehydrogenase I subunit 5, Involved in photosystem-1 cyclic electron flow
NADH dehydrogenase subunit 1
NADH dehydrogenase subunit 2
NADH dehydrogenase subunit 3
NADH dehydrogenase subunit 4 (EC:1.6.99.3)
NADH dehydrogenase subunit 4, Involved in CO2 fixation
NADH dehydrogenase subunit 4L
NADH dehydrogenase subunit 5
NADH dehydrogenase, subunit 5
NADH dehydrogenase subunit 5, Involved in CO2 fixation
NADH dehydrogenase subunit 6
NADH-dependent butanol dehydrogenase A (EC 1.1.1.-)
NADH-dependent butanol dehydrogenase B (EC 1.1.1.-)
NADH oxidoreductase hcr (EC 1.-.-.-)
NADH peroxidase (EC 1.11.1.1)
NADH pyrophosphatase (EC 3.6.1.22)
NADH-quinone oxidoreductase chain F 2 (EC 1.6.99.5)
NADH-quinone oxidoreductase subunit 15 (EC 1.6.99.5)
NADH-reducing hydrogenase maturation factor
NADH:ubiquinone oxidoreductase 17.2 kD subunit
NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3)
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) homolog
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain G2 (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
NAD-independent protein deacetylase AcuC
NAD kinase (EC 2.7.1.23)
NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal (EC 1.2.1.59)
NADP-dependent malic enzyme (EC 1.1.1.40)
NAD(P)H-dependent D-xylose reductase (EC 1.1.1.-)
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
NADPH-dependent methylglyoxal reductase (D-lactaldehyde dehydrogenase)
NADPH-dependent mycothiol reductase Mtr
NADPH dependent preQ0 reductase
NADPH dependent preQ0 reductase-like
NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)
NAD(P)H-quinone oxidoreductase chain 1
NAD(P)H-quinone oxidoreductase chain 5 (EC 1.6.5.2)
NAD(P)H-quinone oxidoreductase chain H (EC 1.6.5.2)
NAD(P)H-quinone oxidoreductase chain I (EC 1.6.5.2)
NAD(P)H-quinone oxidoreductase chain J (EC 1.6.5.2)
NAD(P)H-quinone oxidoreductase chain K (EC 1.6.5.2)
NAD(P)H-quinone oxidoreductase subunit 3 (EC 1.6.5.2)
NADP-reducing hydrogenase, subunit A
NADP-reducing hydrogenase, subunit B
NADP-reducing hydrogenase, subunit C
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)
NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)
NAD-reducing hydrogenase hoxS alpha subunit (EC 1.12.1.2)
NAD-reducing hydrogenase hoxS gamma subunit (EC 1.12.1.2)
NAD-reducing hydrogenase subunit HoxE (EC 1.12.1.2)
NAD-reducing hydrogenase subunit HoxF (EC 1.12.1.2)
NAD-reducing hydrogenase subunit HoxH (EC 1.12.1.2)
NAD-reducing hydrogenase subunit HoxU (EC 1.12.1.2)
NAD-reducing hydrogenase subunit HoxY (EC 1.12.1.2)
NadR transcriptional regulator
NAD-specific glutamate dehydrogenase (EC 1.4.1.2)
NAD-specific glutamate dehydrogenase (EC 1.4.1.2), eukaryotic type
NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large
NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
NAD synthetase (EC 6.3.1.5)
Na+/H+ antiporter NhaA type
Na+/H+ antiporter NhaD type
Na(+) H(+) antiporter subunit A
Na(+) H(+) antiporter subunit A (TC 2.A.63.1.3)
Na(+) H(+) antiporter subunit B
Na(+) H(+) antiporter subunit B (TC 2.A.63.1.3)
Na(+) H(+) antiporter subunit C
Na(+) H(+) antiporter subunit C (TC 2.A.63.1.2)
Na(+) H(+) antiporter subunit C (TC 2.A.63.1.3)
Na(+) H(+) antiporter subunit D
Na(+) H(+) antiporter subunit D (TC 2.A.63.1.3)
Na(+) H(+) antiporter subunit E
Na(+) H(+) antiporter subunit E (TC 2.A.63.1.2)
Na(+) H(+) antiporter subunit E (TC 2.A.63.1.3)
Na(+) H(+) antiporter subunit F
Na(+) H(+) antiporter subunit F (TC 2.A.63.1.2)
Na(+) H(+) antiporter subunit F (TC 2.A.63.1.3)
Na(+) H(+) antiporter subunit G
Na(+) H(+) antiporter subunit G (TC 2.A.63.1.2)
Na(+) H(+) antiporter subunit G (TC 2.A.63.1.3)
Na+/H+-dicarboxylate symporters
Nanos protein
Naphthalene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component (EC 1.18.1.3)
naphthalene dioxygenase ferredoxin
naphthalene dioxygenase Fe-S protein large subunit
naphthalene dioxygenase Fe-S protein small subunit
Naphthoate synthase (EC 4.1.3.36)
Na/Pi cotransporter II-related protein
Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)
NB glycoprotein, integral component of the membrane of influenza B virus
N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)
N-carbamoylputrescine amidase (3.5.1.53)
Negative regulator of allantoin and glyoxylate utilization operons
Negative regulator of beta-lactamase expression
Negative regulator of flagellin synthesis
Negative regulator of flagellin synthesis flgM
Negative regulator of genetic competence MecA
Negative regulator of pheromone responce genes TraA/PrgX
Negative transcriptional regulator
Negative transcriptional regulator-copper transport operon
Neopullulanase (EC 3.2.1.135)
Neuraminidase 4
Neuraminidase (EC 3.2.1.8)
Neuraminidase NanP
Neurosporene desaturase (EC 1.-.-.-)
N-formylglutamate deformylase (EC 3.5.1.68)
N-formylglutamate deformylase (EC 3.5.1.68) [alternative form]
NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)
Niacin transporter in yeast, DAL5 family
Niacin transporter NiaP
Nicel/Cobalt-specific TonB-dependent outer membrane receptor
Nickel ABC transporter, periplasmic nickel-binding protein nikA2 (TC 3.A.1.5.3)
Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Nickel-cobalt-cadmium resistance protein NccB
Nickel-dependent hydrogenase, large subunit
Nickel-dependent hydrogenase, small subunit
Nickel responsive regulator NikR
Nickel transport ATP-binding protein nikD2 (TC 3.A.1.5.3)
Nickel transport ATP-binding protein nikD (TC 3.A.1.5.3)
Nickel transport ATP-binding protein nikE2 (TC 3.A.1.5.3)
Nickel transport ATP-binding protein nikE (TC 3.A.1.5.3)
Nickel transporter UreH
Nickel transport system permease protein nikB2 (TC 3.A.1.5.3)
Nickel transport system permease protein nikB (TC 3.A.1.5.3)
Nickel transport system permease protein nikC2 (TC 3.A.1.5.3)
Nickel transport system permease protein nikC (TC 3.A.1.5.3)
Nicotinamidase (EC 3.5.1.19)
Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), eukaryotic PNAT family
Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1)
Nicotinamide phosphoribosyltransferase (EC 2.4.2.12)
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), eukaryotic PNAT family
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Nicotine adenine dinucleotide glycohydrolase (NADGH) (EC 3.2.2.5)
Ni/Fe-hydrogenase 2 B-type cytochrome subunit
[Ni/Fe] hydrogenase, group 1, large subunit
[Ni/Fe] hydrogenase, group 1, small subunit
Ni,Fe-hydrogenase I cytochrome b subunit
Ni,Fe-hydrogenase III large subunit
Ni,Fe-hydrogenase III small subunit
Ni,Fe-hydrogenase I large subunit
Ni,Fe-hydrogenase maturation factor
[NiFe] hydrogenase metallocenter assembly protein HybG
[NiFe] hydrogenase metallocenter assembly protein HypC
[NiFe] hydrogenase metallocenter assembly protein HypD
[NiFe] hydrogenase metallocenter assembly protein HypE
[NiFe] hydrogenase metallocenter assembly protein HypF
[NiFe] hydrogenase nickel incorporation-associated protein HypB
[NiFe] hydrogenase nickel incorporation HybF-like protein
[NiFe] hydrogenase nickel incorporation protein HybF
[NiFe] hydrogenase nickel incorporation protein HypA
NifS-like cysteine desulfurase DndA
NifX-associated protein
NifZ protein
Nitrate ABC transporter, ATP-binding protein
Nitrate ABC transporter, nitrate-binding protein
Nitrate ABC transporter, permease protein
Nitrate/nitrite response regulator protein
Nitrate/nitrite sensor protein (EC 2.7.3.-)
Nitrate/nitrite transporter
Nitrate reductase cytochrome c550-type subunit
Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit
Nitric oxide-dependent regulator DnrN or NorA
Nitric oxide reductase activation protein NorD
Nitric oxide reductase activation protein NorE
Nitric oxide reductase activation protein NorQ
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
Nitric-oxide reductase subunit B (EC 1.7.99.7)
Nitric-oxide reductase subunit C (EC 1.7.99.7)
Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family)
Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family)
Nitric-oxide synthase, brain (EC 1.14.13.39)
Nitric-oxide synthase, endothelial (EC 1.14.13.39)
Nitric oxide synthase, inducible (EC 1.14.13.39)
Nitric oxide synthase oxygenase (EC 1.-.-.-)
Nitrilase 1 (EC 3.5.5.1)
Nitrilase 2 (EC 3.5.5.1)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)
Nitrite reductase accessory protein NirV
Nitrite reductase associated c-type cytochorome NirN
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4)
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4)
Nitrite-sensitive transcriptional repressor NsrR
Nitrite transporter from formate/nitrite family
Nitrite transporter NirC
Nitrogenase (iron-iron) alpha chain (EC 1.18.6.1)
Nitrogenase (iron-iron) beta chain (EC 1.18.6.1)
Nitrogenase (iron-iron) delta chain (EC 1.18.6.1)
Nitrogenase (iron-iron) iron protein (EC 1.18.6.1)
Nitrogenase (iron-iron) transcriptional regulator
Nitrogenase iron protein (EC 1.18.6.1)
Nitrogenase molybdenum-cofactor synthesis protein NifE
Nitrogenase molybdenum-cofactor synthesis protein NifN
Nitrogenase molybdenum-cofactor synthesis protein NifX
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
Nitrogenase stabilizing/protective protein NifW
Nitrogenase vanadium-cofactor synthesis protein VnfE
Nitrogenase vanadium-cofactor synthesis protein VnfN
Nitrogenase (vanadium-iron) alpha chain (EC 1.18.6.1)
Nitrogenase (vanadium-iron) beta chain (EC 1.18.6.1)
Nitrogenase (vanadium-iron) delta chain (EC 1.18.6.1)
Nitrogen assimilation regulatory protein Nac
Nitrogen regulation protein NR(I)
Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II, glnK
Nitrogen-responsive response regulator NrrA
Nitrous-oxide reductase (EC 1.7.99.6)
Nitrous oxide reductase maturation periplasmic protein NosX
Nitrous oxide reductase maturation protein NosD
Nitrous oxide reductase maturation protein NosF (ATPase)
Nitrous oxide reductase maturation protein NosR
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL
Nitrous oxide reductase maturation transmembrane protein NosY
N-linked glycosylation glycosyltransferase PglG
NLP/P60 family protein
N-methylhydantoinase A (EC 3.5.2.14)
N-methylhydantoinase (ATP-hydrolyzing) (EC 3.5.2.14)
N-methylhydantoinase B (EC 3.5.2.14)
N-methyltransferase (EC 2.1.1.-)
NMN 5'-nucleotidase, extracellular (EC 3.1.3.5)
NMN phosphatase (EC 3.1.3.5)
NMN synthetase (EC 6.3.1.-)
NnrS protein involved in response to NO
Nondeblocking aminopeptidase YpdE (X-X-[^PR]- specific)
Non functional Dihydropteroate synthase 2
Nonheme iron-containing ferritin
Non-imprinted in Prader-Willi/Angelman syndrome 1
Non-imprinted in Prader-Willi/Angelman syndrome region protein 2 homolog
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NAD)
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
Non-ribosomal peptide synthetase modules, pyoverdine
Non-ribosomal peptide synthetase modules, pyoverdine??
Non-ribosomal peptide synthetase modules, siderophore biosynthesis
Non-specific DNA-binding protein Dps
nonspecific lipid-transfer protein (acethyl CoA synthetase)
Nopaline transporter ATP-binding protein NocP
Nopaline transporter periplasmic substrate-binding protein NocT
Nopaline transporter permease protein NocM
Nopaline transporter permease protein NocQ
Not a Proline racemase, nor 4-hydroxyproline epimerase [missing catalytic residues]
novel N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
Novel Xylose regulator from LacI family
NPQTN cell wall anchored protein IsdC
NPQTN specific sortase B
NrfC protein
NrfD protein
N-Ribosylnicotinamide phosphorylase (EC 2.4.2.1)
NRPS loading module Thr-PG-PG-Thr
NRPS module 2 PG-PG-Asn
NRPS module 3 PG-PG
NRPS module 4 PG-Ser-Gly-Thr
N-succinyl arginine/lysine racemase
N-succinyldiaminopimelate aminotransferase (EC 2.6.1.17)
N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)
N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17)
N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)
NTD biosynthesis operon protein NtdA
NTD biosynthesis operon putative hydrolase NtdB (EC 3.-.-.-)
NTD biosynthesis operon putative oxidoreductase NtdC (EC 1.-.-.-)
NTD biosynthesis operon regulator NtdR
NTP pyrophosphohydrolases including oxidative damage repair enzymes
Nuclear pore complex protein Nup88
Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)
Nucleoside diphosphate kinase (EC 2.7.4.6)
Nucleoside-diphosphate sugar epimerase/dehydratase
Nucleoside-diphosphate-sugar epimerases
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Nucleoside permease NupC
Nucleoside triphosphate pyrophosphohydrolase MazG
Nucleotidase YfbR, HD superfamily
Nucleotide excision repair protein, with UvrB/UvrC motif
Nucleotide pyrophosphatase (EC 3.6.1.9)
Nucleotide sugar epimerase
NudC domain containing protein 2
Nudix dNTPase DR0004 (EC 3.6.1.-)
Nudix dNTPase DR0092 (EC 3.6.1.-)
Nudix dNTPase DR0149 (EC 3.6.1.-)
Nudix dNTPase DR0261 (EC 3.6.1.-)
Nudix dNTPase DR0274 (EC 3.6.1.-)
Nudix dNTPase DR0329 (EC 3.6.1.-)
Nudix dNTPase DR0550 (EC 3.6.1.-)
Nudix dNTPase DR0784 (EC 3.6.1.-)
Nudix dNTPase DR1025 (EC 3.6.1.-)
Nudix dNTPase DR1776 (EC 3.6.1.-)
Nudix dNTPase DR2356 (EC 3.6.1.-)
Nudix family (d)NDPase DR0975
Nudix hydrolase family protein PA3470
Nudix hydrolase family protein YffH
Nudix-like NDP and NTP phosphohydrolase YmfB
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)
O-acetyltransferase, anthrose biosynthesis
O-antigen export system, ATP-binding protein
O-antigen export system, permease protein
O-antigen export system, polymerase or transferase
O-antigen flippase Wzx
O-antigen ligase
OB-fold nucleic acid binding domain protein COG1571
Octaheme tetrathionate reductase
Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase
Octaprenyl-diphosphate synthase (EC 2.5.1.-)
Oligo-1,6-glucosidase (EC 3.2.1.10)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA (TC 3.A.1.5.1)
Oligopeptide transport ATP-binding protein oppD (TC 3.A.1.5.1)
Oligopeptide transport ATP-binding protein oppF (TC 3.A.1.5.1)
Oligopeptide transport system permease protein oppB (TC 3.A.1.5.1)
Oligopeptide transport system permease protein oppC (TC 3.A.1.5.1)
Oligoribonuclease (EC 3.1.-.-)
Oligosaccharide repeat unit polymerase Wzy
Oligosaccharide translocase SypK
Oligosaccharyltransferase PglB (EC 2.4.1.119)
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, cyanobacterial
OpgC protein
O-phosphoseryl-tRNA(Cys) synthetase
O-phosphoseryl-tRNA:Cysteinyl-tRNA synthase
O-phosphoseryl-tRNA(Sec) selenium transferase
Optional hypothetical component of the B12 transporter BtuM
Optional hypothetical component of the B12 transporter BtuN
Organic hydroperoxide resistance protein
Organic hydroperoxide resistance transcriptional regulator
Organic solvent tolerance protein precursor
Organomercurial lyase (EC 4.99.1.2)
Organosulfonate utilization protein SsuF
OrgB protein, associated with InvC ATPase of type III secretion system
Origin of replication recognition protein
Ornithine aminotransferase (EC 2.6.1.13)
Ornithine carbamoyltransferase (EC 2.1.3.3)
Ornithine cyclodeaminase (EC 4.3.1.12)
Ornithine decarboxylase (EC 4.1.1.17)
Ornithine decarboxylase, inducible (EC 4.1.1.17)
Ornithine racemase (EC 5.1.1.12)
Orotate phosphoribosyltransferase (EC 2.4.2.10)
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB
Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
Osmotically activated L-carnitine ABC transporter, ATP binding protein, opuCA
Osmotically activated L-carnitine ABC transporter, carnitine-binding protein, opuCC
Osmotically activated L-carnitine ABC transporter, permease protein, opuCB
Osmotically activated L-carnitine ABC transporter, permease protein, opuCD
Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD
Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC
Osmotically inducible protein OsmY
O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)
O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Outer membrane and periplasm component of type IV secretion of T-DNA complex, has secretin-like domain, VirB9
Outer membrane chaperone Skp (OmpH) precursor
Outer membrane component of tripartite multidrug resistance system
Outer membrane ferripyoverdine receptor
Outer membrane ferripyoverdine receptor FpvA, TonB-dependent
Outer membrane ferripyoverdine receptor FpvB, for Type I pyoverdine
Outer membrane fibronectin-binding protein
Outer membrane lipoprotein carrier protein LolA
Outer membrane lipoprotein LolB precursor
Outer membrane lipoprotein omp16 precursor
Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex
Outer membrane porin, coexpressed with pyoverdine biosynthesis regulon
Outer membrane porin, OprD family
Outer membrane porin protein NmpC precursor
outer membrane protein AlgE
Outer membrane protein A precursor
Outer membrane protein assembly factor YaeT precursor
Outer membrane protein GumB, involved in the export of xanthan
Outer membrane protein H precursor
Outer membrane protein ImpK/VasF, OmpA/MotB domain
Outer membrane protein Imp, required for envelope biogenesis
Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL)
Outer membrane protein OprJ
Outer membrane protein/protective antigen OMA87
Outer membrane protein SusE
Outer membrane protein SusF
Outer membrane protein SypB
Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB)
Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB)-like
Outer membrane pyoverdine eflux protein
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Outer membrane receptor for ferric-pyochelin FptA
Outer membrane receptor proteins, mostly Fe transport
Outer Membrane Siderophore Receptor IroN
Outer membrane stress sensor protease DegQ, serine protease
Outer membrane stress sensor protease DegS
Outer membrane sugar transport protein YshA
Outer membrane usher protein SfmD
Outer membrane vitamin B12 receptor BtuB
Outer surface protein of unknown function, cellobiose operon
OxaI/YidC membrane insertion protein
Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Oxalyl-CoA decarboxylase (EC 4.1.1.8)
Oxidoreductase ion channel
Oxidoreductase probably involved in sulfite reduction
Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)
Oxidoreductase YihU
Oxidosqualene cyclase protein
Oxygen-regulated invasion protein OrgA
Oxygen-regulated invasion protein OrgB
Oxytetracycline resistance protein OtrA
P32 subunit of splicing factor SF2
p53 inducible protein
p53-regulating protein kinase (human PRPK/yeast YGR262c)
PAB2272 methyltransferase homolog
Pantoate--beta-alanine ligase (EC 6.3.2.1)
Panton-Valentine leukocidin chain F precursor
Panton-Valentine leukocidin chain S precursor
Pantothenate kinase archaeal, predicted (EC 2.7.1.33)
Pantothenate kinase (EC 2.7.1.33)
Pantothenate kinase type II, eukaryotic (EC 2.7.1.33)
Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)
Pantothenate:Na+ symporter (TC 2.A.21.1.1)
Pantothenate synthetase archaeal, ADP-forming
Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)
Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)
Para-amino-L-phenylalanine methyltransferase (EC 2.1.1.-)
Para-hydroxybenzoate--polyprenyltransferase, mitochondrial precursor (EC 2.5.1.-)
Paraquat-inducible protein A
Paraquat-inducible protein B
Paratox
ParD protein (antitoxin to ParE)
ParE toxin protein
Pca regulon regulatory protein PcaR
p-cumate dioxygenase ferredoxin
p-cumate dioxygenase ferredoxin reductase subunit (CmtAa)
p-cumate dioxygenase large subunit (CmtAb)
p-cumate dioxygenase small subunit (CmtAc)
p-cumic alcohol dehydrogenase (CymB)
p-cumic aldehyde dehydrogenase (CymC) [EC:1.2.1.3]
p-cymene degradation operon transcriptional regulator
P-cymene methyl hydroxylase
p-cymene monooxygenase, hydroxylase subunit(CymAa)
P-cymene monooxygenase, reductase subunit(CymAb) (EC 1.17.1.-)
Pectin degradation protein KdgF
Penicillin-binding protein 1A/1B (PBP1)
Penicillin-binding protein 2B
Penicillin-binding protein 2 (PBP-2)
Penicillin-binding protein 3
Penicillin-binding protein 4 precursor
Penicillin-binding protein PBP2
Penicillin-binding protein PBP2a, methicillin resistance determinant MecA, transpeptidase
Penicillin binding protein PBP4
penicillin-binding protein, putative
Pentacyclic triterpene synthase
Peptidase B (EC 3.4.11.23)
Peptidase C14, caspase catalytic subunit p20
Peptidase M14, carboxypeptidase A
Peptidase M23B precursor
Peptidase, M23/M37 family
Peptide chain release factor 1
Peptide chain release factor 2
Peptide chain release factor 2 unshifted fragment
Peptide chain release factor 3
Peptide chain release factor homolog
Peptide deformylase (EC 3.5.1.88)
Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)
Peptide methionine sulfoxide reductase regulator MsrR
Peptide transport periplasmic protein sapA (TC 3.A.1.5.5)
Peptide transport system ATP-binding protein sapD (TC 3.A.1.5.5)
Peptide transport system ATP-binding protein sapF (TC 3.A.1.5.5)
Peptide transport system permease protein sapB (TC 3.A.1.5.5)
Peptide transport system permease protein sapC (TC 3.A.1.5.5)
Peptidoglycan-associated lipoprotein precursor
peptidoglycan lytic protein P45
Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)
Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2)
Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)
Peptidyl-prolyl cis-trans isomerase ppiB (EC 5.2.1.8)
Peptidyl-prolyl cis-trans isomerase ppiC (EC 5.2.1.8)
Peptidyl-prolyl cis-trans isomerase ppiD (EC 5.2.1.8)
Peptidyl-tRNA hydrolase, archaeal type (EC 3.1.1.29)
Peptidyl-tRNA hydrolase (EC 3.1.1.29)
Per-activated serine protease autotransporter enterotoxin EspC
Periplasmic alpha-amylase (EC 3.2.1.1)
Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57)
Periplasmic beta-glucosidase (EC 3.2.1.21)
Periplasmic chorismate mutase I precursor (EC 5.4.99.5)
Periplasmic divalent cation tolerance protein cutA
Periplasmic esterase IroE
Periplasmic [Fe] hydrogenase (EC 1.12.7.2)
Periplasmic [Fe] hydrogenase large subunit (EC 1.12.7.2)
Periplasmic [Fe] hydrogenase small subunit (EC 1.12.7.2)
periplasmic fructose-binding protein component of signal transduction system LevQ
periplasmic fructose-binding protein component of signal transduction system LevT
Periplasmic hemin-binding protein
Periplasmic lysozyme inhibitor of c-type lysozyme
Periplasmic/membrane protein associated with DUF414
Periplasmic mercury(+2) binding protein
Periplasmic Murein Peptide-Binding Protein MppA
Periplasmic nitrate reductase component NapD
Periplasmic nitrate reductase component NapE
Periplasmic nitrate reductase component NapL
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Periplasmic protein p19 involved in high-affinity Fe2+ transport
Periplasmic protein SypC involved in polysaccharide export
Periplasmic protein torT precursor
Periplasmic protein YqjC
Periplasmic thiol:disulfide interchange protein DsbA
Periplasmic thiol:disulfide interchange protein, DsbA-like
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation
Permease of the drug/metabolite transporter (DMT) superfamily
Permease Ygh-P1, YjgP/YjgQ family
Permease Ygh-P2, YjgP/YjgQ family
Peroxidase/catalase HPI (EC 1.11.1.6)
Peroxidase (EC 1.11.1.7)
Peroxidase precursor (EC 1.11.1.7)
Peroxide stress regulator
Peroxide stress regulator PerR, FUR family
Pertussis toxin subunit 1 precursor (NAD-dependent ADP-ribosyltransferase) (EC 2.4.2.-)
Pertussis toxin subunit 2 precursor (PTX S2)
Pertussis toxin subunit 3 precursor (PTX S3)
Pertussis toxin subunit 4 precursor (PTX S4)
Pertussis toxin subunit 5 precursor (PTX S5)
pH adaptation potassium efflux system a
pH adaptation potassium efflux system c
pH adaptation potassium efflux system d
pH adaptation potassium efflux system e
pH adaptation potassium efflux system f
pH adaptation potassium efflux system g
PH adaptation potassium efflux system protein B1
PH adaptation potassium efflux system protein B2
PH adaptation potassium efflux system protein C
PH adaptation potassium efflux system protein D 1
pH adaptation potassium efflux system protein D 2
pH adaptation potassium efflux system protein D 3
PH adaptation potassium efflux system protein E
PH adaptation potassium efflux system protein G
pH adaption potassium efflux system protein PhaD
pH adaption potassium efflux system protein PhaE
pH adaption potassium efflux system protein PhaF
pH adaption potassium efflux system protein PhaG
Phage-associated cell wall hydrolase
Phage head protein [SA bacteriophages 11, Mu50B]
Phage hyaluronidase
Phage major tail shaft protein
Phage minor tail protein
Phage portal protein
Phage shock protein A
Phage shock protein B
Phage shock protein C
Phage shock protein D
Phage shock protein E
Phage shock protein E precursor
Phage T7 exclusion protein
Phage tail assembly chaperone
Phage tail assembly protein
Phage tail assembly protein I
Phage tail fiber protein
Phage tail length tape-measure protein
Phage tail length tape-measure protein 1
Phage terminase large subunit
Phage terminase, large subunit [SA bacteriophages 11, Mu50B]
Phage terminase small subunit
Phage terminase, small subunit [SA bacteriophages 11, Mu50B]
PhaK-like protein
Phenazine biosynthesis protein PhzA
Phenazine biosynthesis protein PhzB
Phenazine biosynthesis protein PhzC
Phenazine biosynthesis protein PhzD
Phenazine biosynthesis protein PhzE
Phenazine biosynthesis protein PhzF
Phenazine biosynthesis protein PhzG
Phenazine modifying protein PhzH
Phenazine-specific methyltransferase PhzM
Phenylacetaldehyde dehydrogenase (EC 1.2.1.39)
Phenylacetate-CoA oxygenase, PaaG subunit
Phenylacetate-CoA oxygenase, PaaH subunit
Phenylacetate-CoA oxygenase, PaaI subunit
Phenylacetate-CoA oxygenase, PaaJ subunit
Phenylacetate-CoA oxygenase/reductase, PaaK subunit
Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Phenylacetate-coenzyme A ligase (EC 6.2.1.30) PaaF
Phenylacetate degradation enoyl-CoA hydratase PaaA (EC 4.2.1.17)
Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17)
Phenylacetic acid degradation operon negative regulatory protein PaaX
Phenylacetic acid degradation protein PaaD, thioesterase
Phenylacetic acid degradation protein PaaE, ketothiolase
Phenylacetic acid degradation protein PaaN2, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)
Phenylacetic acid degradation protein PaaY
Phenylacetic acid-specific porin PaaM
Phenylalanine-4-hydroxylase (EC 1.14.16.1)
Phenylalanine hydroxylase transcriptional activator PhhR
Phenylalanine-specific permease
Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20), mitochondrial
Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
Phenylitaconyl-CoA hydratase (EC 4.2.1.-)
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Pheophorbide a oxygenase (EC 1.14.-.-)
Pheromone binding protein TraC/PrgZ
Pheromone cAD1 precursor lipoprotein Cad
Pheromone cAM373 precursor lipoprotein CamE
Pheromone response surface protein PrgC
Pheromone shutdown protein TraB/PrgY
phi 11 orf31 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf32 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf33 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf35 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf36 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf37 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf38 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf39 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf40 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf41 homolog [SA bacteriophages 11, Mu50B]
phi 11 orf43 homolog [SA bacteriophages 11, Mu50B]
"phi-Carotenoid synthase" (EC 1.3.-.- and EC 2.1.1-)
PhnB protein
PhnG protein
PhnH protein
PhnI protein
PhnJ protein
PhnO protein
Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
Phosphatase, Ppx/GppA family
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
Phosphate acetyltransferase (EC 2.3.1.8)
Phosphate acetyltransferase (EC 2.3.1.8), ethanolamine utilization-specific
Phosphate:acyl-ACP acyltransferase PlsX
Phosphate butyryltransferase (EC 2.3.1.19)
Phosphate permease PHO89 (Na( )/Pi cotransporter PHO89)
Phosphate regulon sensor protein PhoR (EC 2.7.3.-)
Phosphate regulon sensor protein SphS (EC 2.7.13.3)
Phosphate regulon transcriptional regulatory protein PhoB
Phosphate regulon transcriptional regulatory protein SphR
Phosphate-specific outer membrane porin OprP
Phosphate starvation-inducible protein PhoH, predicted ATPase
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
Phosphate transport regulator (distant homolog of PhoU)
Phosphate transport system permease protein pstC (TC 3.A.1.7.1)
Phosphate transport system regulatory protein PhoU
Phosphatidate cytidylyltransferase (EC 2.7.7.41)
Phosphatidylglycerophosphatase A (EC 3.1.3.27)
Phosphatidylglycerophosphatase B (EC 3.1.3.27)
Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57)
Phosphatidylinositol-specific phospholipase C (EC 4.6.1.13)
Phosphatidylserine decarboxylase (EC 4.1.1.65)
Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54)
Phosphoacetylglucosamine mutase (EC 5.4.2.3)
Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)
Phosphoanhydride phosphohydrolase (EC 3.1.3.2) (pH 2.5 acid phosphatase) (AP)
Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated
Phosphocarrier protein of PTS system
Phospho-di-inositol-1-phosphate synthase (EC 2.7.8.-)
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
Phosphoenolpyruvate carboxylase, archaeal (EC 4.1.1.31)
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase operon regulatory protein DhaR
Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Phosphoenolpyruvate synthase (EC 2.7.9.2)
Phosphoesterase, DHH family protein
Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A
Phosphoethanolamine transferase specific for the outer Kdo residue of lipopolysaccharide
Phosphoglucomutase (EC 5.4.2.2)
Phosphogluconate dehydratase (EC 4.2.1.12)
Phosphoglucosamine mutase (EC 5.4.2.10)
Phosphoglycerate kinase (EC 2.7.2.3)
Phosphoglycerate mutase (EC 5.4.2.1)
Phosphoglycerate transporter protein PgtP
Phosphoglycerate transport regulatory protein PgtC
Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-)
Phosphoglycerate transport system transcriptional regulatory protein PgtA
Phosphoglycerol transferase I (EC 2.7.8.20)
Phosphoglyceromutase
Phosphoglycolate phosphatase (EC 3.1.3.18)
Phosphoheptose isomerase 1 (EC 5.3.1.-)
Phosphoheptose isomerase 2 (EC 5.3.1.-)
Phosphoheptose isomerase (EC 5.3.1.-)
Phosphohistidine phosphatase SixA
Phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4)
Phospholipid-lipopolysaccharide ABC transporter
Phosphomannomutase (EC 5.4.2.8)
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Phosphomevalonate kinase (EC 2.7.4.2)
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)
Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)
Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)
Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1)
Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
Phosphonates transport ATP-binding protein PhnK
Phosphonates transport ATP-binding protein PhnL
Phosphonate uptake and metabolism regulator, LysR-family
Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
Phosphonoacetate hydrolase (EC 3.11.1.2)
Phosphonopyruvate decarboxylase (EC 4.1.1.82)
Phosphopantetheine adenylyltransferase (EC 2.7.7.3)
Phosphopantetheine adenylyltransferase, type II eukaryotic (EC 2.7.7.3)
Phosphopantetheinyl transferase component of siderophore synthetase (EC 2.7.8.-)
Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)
Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)
Phosphopentomutase (EC 5.4.2.7)
Phosphoprotein phosphatase PppA
Phosphorelay protein LuxU
Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Phosphoribosylaminoimidazolecarboxamide formyltransferase [alternate form]
Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)
Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)
Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-)
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein
Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)
Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)
Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
Phosphoribulokinase (EC 2.7.1.19)
Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown
Phosphoserine aminotransferase (EC 2.6.1.52)
Phosphoserine aminotransferase, putative (EC 2.6.1.52)
Phosphoserine phosphatase (EC 3.1.3.3)
Phosphoserine phosphatase, putative (EC 3.1.3.3)
Phosphosugar-binding transcriptional repressor, RpiR family
Phosphosulfolactate synthase (EC 4.4.1.19)
Phosphotransferase system for xylose-containing disaccharide, EIIA component
Phosphotransferase system for xylose-containing disaccharide, EIIB component
Phosphotransferase system for xylose-containing disaccharide, EIIC component
Phosphotransferase system for xylose-containing disaccharide, EIID component
Phosphotransferase system HPr enzyme in cluster with fructose-bisphosphate aldolase
Photosynthetic reaction center cytochrome c subunit
Photosynthetic reaction center H subunit
Photosynthetic reaction center L subunit
Photosynthetic reaction center M subunit
photosystem I 4.8K protein (PsaX)
photosystem I assembly related protein Ycf3
photosystem I assembly related protein Ycf37
photosystem I assembly related protein Ycf4
photosystem I biogenesis protein BtpA
Photosystem II 10 kDa phosphoprotein (PsbH)
Photosystem II 10 kDa protein PsbR
Photosystem II 12 kDa extrinsic protein (PsbU)
Photosystem II 13 kDa protein Psb28 (PsbW)
Photosystem II 5 kDa protein PsbTn (nuclear encoded)
Photosystem II 6.1 kDa protein PsbW (nuclear encoded)
Photosystem II CP43 protein (PsbC)
Photosystem II CP47 protein (PsbB)
Photosystem II manganese-stabilizing protein (PsbO)
Photosystem II oxygen evolving complex protein PsbP
Photosystem II oxygen evolving complex protein PsbQ
photosystem II protein D1 (PsbA)
photosystem II protein D2 (PsbD)
Photosystem II protein Psb27
Photosystem II protein PsbI
Photosystem II protein PsbJ
Photosystem II protein PsbK
Photosystem II protein PsbL
Photosystem II protein PsbM
Photosystem II protein PsbN
Photosystem II protein PsbT
Photosystem II protein PsbV, cytochrome c550
Photosystem II protein PsbX
Photosystem II protein PsbY
Photosystem II protein PsbZ
photosystem II reaction center PsbP family protein
photosystem I iron-sulfur center subunit VII (PsaC)
Photosystem II stability/assembly factor HCF136/Ycf48
photosystem I P700 chlorophyll a apoprotein subunit Ia (PsaA)
photosystem I P700 chlorophyll a apoprotein subunit Ib (PsaB)
photosystem I subunit III precursor, plastocyanin (cyt c553) docking protein (PsaF)
photosystem I subunit II (PsaD)
photosystem I subunit IV (PsaE)
photosystem I subunit IX (PsaJ)
photosystem I subunit PsaN
photosystem I subunit PsaO
photosystem I subunit VIII (PsaI)
photosystem I subunit VI (PsaH)
photosystem I subunit V (PsaG/PsaK)
photosystem I subunit XII (PsaM)
photosystem I subunit XI (PsaL)
photosystem I subunit X (PsaK, PsaK1)
Photosystem P840 reaction center iron-sulfur subunit PscB
Photosystem P840 reaction center large subunit PscA
Photosystem P840 reaction center subunit PscC, cytochrome c-551
Photosystem P840 reaction center subunit PscD
Phycobilisome core component
Phycobilisome core-membrane linker polypeptide
Phycobilisome degradation protein NblA
Phycobilisome phycoerythrin-associated linker polypeptide
Phycobilisome rod-core linker polypeptide, phycocyanin-associated
Phycobilisome rod linker polypeptide, phycocyanin-associated
Phycobilisome rod linker polypeptide, phycoerythrocyanin-associated
Phycobilisome small core linker polypeptide
Phycobilisome small rod capping linker polypeptide, phycocyanin-associated
Phycocyanin alpha chain
Phycocyanin alpha phycocyanobilin lyase related protein NblB
Phycocyanin beta chain
Phycocyanobilin:ferredoxin oxidoreductase PcyA (EC 1.3.7.5)
Phycocyanobilin lyase alpha subunit
Phycocyanobilin lyase beta subunit
Phycoerythrin alpha chain
Phycoerythrin beta chain
Phycoerythrin gamma chain linker polypeptide
Phycoerythrin linker protein CpeS homolog
Phycoerythrobilin:ferredoxin oxidoreductase PebB (EC 1.3.7.3)
Phycoerythrocyanin alpha chain
Phycoerythrocyanin beta chain
P-hydroxybenzoate hydroxylase (EC 1.14.13.2)
P-hydroxylaminobenzoate lyase
Phytochelatin synthase (EC 2.3.2.15), bacterial type
Phytochelatin synthase (EC 2.3.2.15), eukaryotic type
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)
Phytochromobilin:ferredoxin oxidoreductase (EC 1.3.7.4)
Phytoene dehydrogenase and related proteins
Phytoene dehydrogenase (EC 1.14.99.-)
Phytoene desaturase (EC 1.14.99.-)
Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)
Phytoene desaturase, pro-zeta-carotene producing (EC 1.-.-.-)
Phytoene synthase (EC 2.5.1.32)
PilD
pilin
Pili retraction protein pilT
PilS cassette
PilT
Pimeloyl-CoA synthase (EC 6.2.1.14)
Pirin-like protein YhaK
Pirin-related protein, coexpressed with pyoverdine biosynthesis regulon
Plant-induced nitrilase (EC 3.5.5.1), hydrolyses beta-cyano-L-alanine
Plant-inducible protein PinF1, cytochrome P450-like, contributes to virulence
Plant-inducible protein PinF2, cytochrome P450-like, contributes to virulence
Plasmid conjugative transfer DNA helicase TrhI
Plasmid conjugative transfer endonuclease
Plasmid partitioning protein ParA
Plasmid replication protein RepA
Plasmid replication protein RepB
Plasmid replication protein RepC
Plasminogen activator inhibitor-1, protease inhibitor I04.020
Plasmin(ogen) receptor
Plasmin, protease S01.233
PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene
PlcR activating protein PapR, quorum-sensing effector
Pleiotropic negative regulator for morphological and physiological development in Streptomyces, BldD
PnuC-like transporter linked to homoserine kinase and OMR
Pole remodelling regulatory diguanylate cyclase
Poly(3-hydroxyalkanoate) depolymerase
Poly [ADP-ribose] polymerase-1 (EC 2.4.2.30)
Poly(A) polymerase (EC 2.7.7.19)
Poly(beta-D-mannuronate) C5 epimerase precursor (EC 5.1.3.-)
poly(beta-D-mannuronate) lyase (EC 4.2.2.3)
Polyferredoxin NapH (periplasmic nitrate reductase)
Poly-gamma-glutamate synthase subunit PgsA/CapA (EC 6.3.2.-)
Poly-gamma-glutamate synthase subunit PgsB/CapB (EC 6.3.2.-)
Poly-gamma-glutamate synthase subunit PgsC/CapC (EC 6.3.2.-)
Poly-gamma-glutamate synthase subunit PgsE/CapE (EC 6.3.2.-)
Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)
Poly(glycerophosphate chain) D-alanine transfer protein DltD
Polyhydroxyalkanoate granule-associated protein PhaF
polyhydroxyalkanoate granule-associated protein PhaI
polyhydroxyalkanoate synthesis repressor PhaR
Polyhydroxyalkanoic acid synthase
Polymyxin resistance protein ArnA_DH, UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
Polymyxin resistance protein ArnA_FT, UDP-4-amino-4-deoxy-L-arabinose formylase (EC 2.1.2.-)
Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-)
Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase
Polymyxin resistance protein PmrD
Polymyxin resistance protein PmrG
Polymyxin resistance protein PmrJ, predicted deacetylase
Polymyxin resistance protein PmrL, sucrose-6 phosphate hydrolase
Polymyxin resistance protein PmrM
Polymyxin synthetase PmxA
Polymyxin synthetase PmxB
Polymyxin transporter PmxC
Polyphosphate glucokinase (EC 2.7.1.63)
Polyphosphate kinase (EC 2.7.4.1)
Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Polysaccharide biosynthesis chain length regulator SypO
Polysaccharide biosynthesis glycosyl transferase CpsJ
Polysaccharide biosynthesis glycosyl transferase CpsN
Polysaccharide biosynthesis glycosyl transferase CpsO
Polysaccharide biosynthesis protein CpsF
Polysaccharide biosynthesis protein CpsH(V)
Polysaccharide biosynthesis protein CpsM(V)
polysaccharide biosynthesis protein, putative
Polysaccharide deacetylase
Polysaccharide deacetylase, caspase activity
Polysaccharide export lipoprotein Wza
polysaccharide export protein, putative
Polysaccharide intercellular adhesin (PIA) biosynthesis deacetylase IcaB (EC 3.-.-.-)
Polysaccharide intercellular adhesin (PIA) biosynthesis N-glycosyltransferase IcaA (EC 2.4.-.-)
Polysaccharide intercellular adhesin (PIA) biosynthesis protein IcaC
Polysaccharide intercellular adhesin (PIA) biosynthesis protein IcaD
Polysialic acid capsule sugar isomerase, KpsF/GutQ family
Polysialic acid transport protein KpsM
polysulfide reductase, subunit A
Polysulfide reductase, subunit A, putative
polysulfide reductase, subunit B
Polysulfide reductase, subunit B, putative
polysulfide reductase, subunit C
Polysulfide reductase, subunit C, putative
Porphobilinogen deaminase (EC 2.5.1.61)
Porphobilinogen synthase (EC 4.2.1.24)
Portal protein [Bacteriophage A118]
Positive regulator of CheA protein activity (CheW)
Positive regulator of competence TfoX
Positive regulator of L-idonate catabolism
Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme
Positive transcription regulator EvgA
Possible 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-)
Possible ABC transporter, periplasmic substrate X binding protein precursor
Possible alpha-xyloside ABC transporter, ATP-binding component
Possible alpha-xyloside ABC transporter, permease component
Possible alpha-xyloside ABC transporter, substrate-binding component
Possible alternative L-fucose mutarotase
Possible bacterioferritin
Possible carbon dioxide concentrating mechanism protein CcmK
Possible colicin V production protein
POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN
Possible D-erythrulose 4-phosphate dehydrogenase EryC (EC 1.1.1.-)
Possible divergent polysaccharide deacetylase
Possible electron transfer protein FdxB (EC 1.-.-.-)
Possible fucose ABC transporter, ATP-binding component
Possible fucose ABC transporter, permease component
Possible fucose ABC transporter, substrate-binding component
Possible GPH family transporter (TC 2.A.2) for arabinosides
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway
Possible hypoxanthine oxidase XdhD (EC 1.-.-.-)
Possible potassium-efflux system protein
Possible pterin-4 alpha-carbinolamine dehydratase-like protein
Possible pyrimidine permease in reductive pathway
Possible rhamnose ABC transporter, ATP-binding component
Possible rhamnose ABC transporter, permease component 1
Possible rhamnose ABC transporter, permease component 2
Possible rhamnose ABC transporter, substrate-binding component
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway
Possible RuBisCo chaperonin RbcX
Possible subunit variant of phosphoribosylaminoimidazolecarboxamide formyltransferase [alternate form]
Possible third subunit-variant of phosphoribosylaminoimidazolecarboxamide formyltransferase [alternate form]
Possibly related to ydbT
Potassium channel protein
Potassium channel protein 1 (MjK1)
Potassium efflux system f786
Potassium efflux system KefA protein
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel
Potassium efflux system YjeP
POTASSIUM/PROTON ANTIPORTER ROSB
Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC  3.A.3.7.1)
Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
Potassium uptake protein, integral membrane component, KtrA
Potassium uptake protein, integral membrane component, KtrB
Potassium uptake protein TrkH
Potassium voltage-gated channel subfamily A member 4
Potassium voltage-gated channel subfamily B member 1
Potassium voltage-gated channel subfamily KQT
potential Fumarate hydratase class II (EC 4.2.1.2)
Potential ribosomal protein
PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation
PPE family protein
PqqC-like protein
PQS biosynthesis protein PqsA, anthranilate-CoA ligase (EC 6.2.1.32)
PQS biosynthesis protein PqsB, similar to 3-oxoacyl-[acyl-carrier-protein] synthase III
PQS biosynthesis protein PqsC, similar to 3-oxoacyl-[acyl-carrier-protein] synthase III
PQS biosynthesis protein PqsD, similar to 3-oxoacyl-[acyl-carrier-protein] synthase III
PQS biosynthesis protein PqsH, similar to FAD-dependent monooxygenases
PqsE, quinolone signal response protein
Precorrin-2 oxidase (EC 1.3.1.76)
Precorrin-6A synthase (EC 2.1.1.152)
predicted 2-keto-3-deoxyxylonate dehydratase
Predicted 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
Predicted 4-hydroxyproline dipeptidase
Predicted 5-dehydro-4-deoxyglucarate regulator YcbG
Predicted adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62)
Predicted alpha-ribazole-5'-phosphate phosphatase CobZ (EC 3.1.3.73)
Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis
Predicted alternative glutathione synthetase (EC 6.3.2.3)
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway
Predicted amino-acid acetyltransferase (EC 2.3.1.1) complementing ArgA function in Arginine Biosynthesis pathway
Predicted aminoglycoside phosphotransferase
Predicted ATPase related to phosphate starvation-inducible protein PhoH
Predicted ATPase with chaperone activity, associated with Flp pilus assembly
Predicted beta-xyloside ABC transporter, ATP-binding component
Predicted beta-xyloside ABC transporter, permease component
Predicted beta-xyloside ABC transporter, substrate-binding component
Predicted b-glucoside-specific TonB-dependent outer membrane receptor
Predicted b-glucoside transporter, GPH family
predicted biotin regulatory protein BioR (GntR family)
Predicted biotin repressor from TetR family
Predicted carboxypeptidase
Predicted cell-wall-anchored protein SasA (LPXTG motif)
Predicted cell-wall-anchored protein SasC (LPXTG motif)
Predicted cell-wall-anchored protein SasD (LPXAG motif)
Predicted cell-wall-anchored protein SasF (LPXAG motif)
Predicted cell-wall-anchored protein SasI (LPXTG motif)
Predicted cell-wall-anchored protein SasK (LPXTG motif)
Predicted cobalt ABC transporter periplasmic component
Predicted cobalt transporter CbtA
Predicted cobalt transporter CbtC
Predicted cobalt transporter in Bacteroides_Porphyromonas
Predicted cobalt transporter in Mycobacteria
Predicted cobalt transporter in sulfate-reducing delta-proteobacteria
Predicted cobalt transporter in Thermoplasma
Predicted D-glucarate or D-galactorate regulator, GntR family
Predicted D-glucarate or D-galactorate regulator, IclR family
Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing
Predicted endonuclease distantly related to archaeal Holliday junction resolvase
Predicted erythritol ABC transporter 1, ATP-binding component 1
Predicted erythritol ABC transporter 1, ATP-binding component 2
Predicted erythritol ABC transporter 1, permease component 1
Predicted erythritol ABC transporter 1, permease component 2
Predicted erythritol ABC transporter 1, substrate-binding component
Predicted erythritol ABC transporter 2, ATP-binding component
Predicted erythritol ABC transporter 2, hypothetical lipoprotein
Predicted erythritol ABC transporter 2, permease component
Predicted erythritol ABC transporter 2, substrate-binding component
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway
Predicted Fructose-bisphosphate aldolase (EC 4.1.2.13) in Geobacter
Predicted functional analog of homoserine kinase (EC 2.7.1.-)
Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family
Predicted galacto-N-biose-/lacto-N-biose I ABC transporter, periplasmic substrate-binding protein
Predicted galacto-N-biose-/lacto-N-biose I ABC transporter, permease component 1
Predicted galacto-N-biose-/lacto-N-biose I ABC transporter, permease component 2
Predicted gluconate TRAP family transporter, DctM subunit
Predicted gluconate TRAP family transporter, DctP subunit
Predicted gluconate TRAP family transporter, DctQ subunit
Predicted glucose transporter in b-glucoside utilization gene cluster
Predicted glucose transporter in maltodextrin utilization gene cluster
Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type
Predicted hydrolase of the metallo-beta-lactamase superfamily, clustered with KDO2-Lipid A biosynthesis genes
Predicted hydroxymethylpyrimidine transporter CytX
Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
Predicted Lactate-responsive regulator, IclR family
Predicted Lactate-responsive regulator, LysR family
Predicted lactate-responsive transcriptional regulator of ykgEFG LDH gene cluster, LysR-type
Predicted L-arabinose ABC transport system, ATP-binding protein
Predicted L-arabinose ABC transport system, periplasmic arabinose-binding protein
Predicted L-arabinose ABC transport system, permease protein 1
Predicted L-arabinose ABC transport system, permease protein 2
Predicted L-fucose-specific phosphotransferase system, EIIA component
Predicted L-fucose-specific phosphotransferase system, EIIB component
Predicted L-fucose-specific phosphotransferase system, EIIC component
Predicted L-fucose-specific phosphotransferase system, EIID component
Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE
Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518
Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG
Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF
Predicted L-rhamnose ABC transporter, ATP-binding component
Predicted L-rhamnose ABC transporter, substrate-binding component
Predicted L-rhamnose ABC transporter, transmembrane component 1
Predicted L-rhamnose ABC transporter, transmembrane component 2
Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
Predicted L-rhamnose permease RhaY
Predicted L-serine dehydratase (EC 4.3.1.17) TdcG
Predicted maltose-specific TonB-dependent receptor
Predicted maltose transporter MalT
Predicted mannitol permease
Predicted mannose transporter, GGP family
Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG
predicted metal-dependent hydrolase
Predicted methyltransferase, DUF43 family
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway
Predicted N6-adenine-specific RNA methylase containing THUMP domain
Predicted N-acetylgalactosamine kinase, ROK-type (EC 2.7.1.157)
Predicted N-acetyl-glucosamine kinase 2, ROK family (EC 2.7.1.59)
predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)
predicted nucleic acid-binding protein, containing PIN domain COG1848
Predicted nucleoside ABC transporter, ATP-binding component
Predicted nucleoside ABC transporter, permease 1 component
Predicted nucleoside ABC transporter, permease 2 component
Predicted nucleoside ABC transporter, substrate-binding component
Predicted nucleotidyltransferases
Predicted oxidoreductase, Fe-S subunit
Predicted P-loop ATPase fused to an acetyltransferase COG1444
Predicted polyamine sensor NspS, involved in biofilm formation
Predicted protein SypD
Predicted PTS system, galactosamine-specific IIA component (EC 2.7.1.69)
Predicted PTS system, galactosamine-specific IIB component (EC 2.7.1.69)
Predicted PTS system, galactosamine-specific IIC component (EC 2.7.1.69)
Predicted PTS system, galactosamine-specific IID component (EC 2.7.1.69)
Predicted pyrimidine permease RutG in novel pyrimidine catabolism pathway
Predicted reductase RutE in novel pyrimidine catabolism pathway
Predicted rhamnogalacturonan lyase in rhamnose utilization cluster
Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC
Predicted rhamnogalacturonide-specific TRAP-type transporter, small transmembrane component RhiB
Predicted rhamnogalacturonide-specific TRAP-type transporter, substrate-binding component RhiA
Predicted rhamnose oligosaccharide ABC transport system, permease component
Predicted rhamnose oligosaccharide ABC transport system, permease component 2
Predicted rhamnose oligosaccharide ABC transport system, substrate-binding component
Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Predicted RNA-binding protein COG1491
Predicted RNA methylase COG2263
Predicted sialic acid transporter
Predicted signal transduction protein
Predicted signal-transduction protein containing cAMP-binding and CBS domains
Predicted sodium-dependent mannose transporter
Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
Predicted sucrose permease, MFS family, FucP subfamily
Predicted sucrose-specific TonB-dependent receptor
Predicted sugar ABC transport system, ATP-binding protein YphE
Predicted sugar ABC transport system, periplasmic binding protein YphF precursor
Predicted sugar ABC transport system, permease protein YphD
Predicted thiamin transporter PnuT
Predicted thiamin transporter ThiT
Predicted thiazole transporter ThiU
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family
Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Predicted transcriptional regulator of 4-carboxymuconolactone decarboxylase, Rrf2 family
Predicted transcriptional regulator of cysteine synthase, Rrf2 family
Predicted transcriptional regulator of leucine degradation pathway, MerR family
Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family
Predicted transcriptional regulator of N-Acetylglucosamine utilization, LacI family
Predicted transcriptional regulator of NADH dehydrogenase, Rrf2 family
Predicted transcriptional regulator of sulfate adenylyltransferase, Rrf2 family
Predicted transcriptional regulator of sulfate transport, Rrf2 family
Predicted transcriptional regulator of the myo-inositol catabolic operon
Predicted trehalose permease, MFS family
Predicted trehalose permease, MFS family, FucP subfamily
Predicted zinc-binding protein
Predictet Brp-like protein Blh
Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43)
Prephenate dehydratase (EC 4.2.1.51)
Prephenate dehydrogenase (EC 1.3.1.12)
Preprotein translocase SecY2 subunit (TC 3.A.5.1.1)
Preprotein translocase secY subunit (TC 3.A.5.1.1)
Preprotein translocase subunit SecE (TC 3.A.5.1.1)
Preprotein translocase subunit SecG (TC 3.A.5.1.1)
Preprotein translocase subunit YajC (TC 3.A.5.1.1)
preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)
Prespore specific transcriptional activator RsfA
Primosomal protein I
Primosomal replication protein N
Primosomal replication protein N prime prime
Probable 3-phenylpropionic acid transporter
Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase
Probable acetyl-CoA acetyltransferase FadA5 (EC 2.3.1.9)
Probable acetyl-CoA acetyltransferase FadA6 (EC 2.3.1.9)
Probable acyl-CoA dehydrogenase (EC 1.3.99.3)
Probable acyl-CoA dehydrogenase FadE28 (EC 1.3.99.-)
Probable acyl-CoA dehydrogenase FadE29 (EC 1.3.99.-)
Probable ATP synthase SpaL (EC 3.6.3.14) (Invasion protein InvC)
probable beta-D-galactosidase
Probable beta-lactamase ybxI precursor (EC 3.5.2.6)
Probable cadmium-transporting ATPase (EC 3.6.3.3)
Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)
Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB)
Probable Co/Zn/Cd efflux system membrane fusion protein
Probable cytochrome c2
Probable cytochrome c-552
probable cytochrome oxidase (cbb3-type)
probable dibenzothiophene desulfurization enzyme
Probable drug resistance transport protein
Probable electron transfer flavoprotein-quinone oxidoreductase FixC (EC 1.5.5.-)
Probable enoyl-CoA hydratase EchA20 (EC 4.2.1.17)
Probable exported or periplasmic protein in ApbE locus
probable exported protein YPO3233
Probable FERULIC acid hydratase protein
Probable FERULOYL-CoA synthetase protein
Probable Fe-S oxidoreductase family 2
Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog
Probable glutathione S-transferase (EC 2.5.1.18), YfcG homolog
Probable GTPase related to EngC
Probable hydrolase, coexpressed with pyoverdine biosynthesis regulon
probable iron binding protein for iron-sulfur cluster assembly
probable iron binding protein from the HesB_IscA_SufA family
probable lipoprotein
Probable low-affinity inorganic phosphate transporter
Probable monothiol glutaredoxin GrlA
Probable NADPH:quinone reductase (EC 1.6.5.5)
Probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit
Probable outer membrane component of multidrug efflux pump
probable periplasmic protein NMA0227
Probable peroxiredoxin (EC 1.11.1.15)
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)
Probable polyketide synthase, similar to many. e.g. gp|M63676|SERERYAA_1 S.erythraea first ORF of eryA gene, involved in complex polyketide formation in erythromycin biosynthesis.
Probable proline and glycine rich transmembrane protein gene in bax
Probable protease HtpX (EC 3.4.24.-)
Probable pyridine nucleotide-disulfide oxidoreductase YkgC
Probable pyrimidine nucleoside transport protein
Probable reactivating factor for D-ornithine aminomutase
Probable RND efflux membrane fusion protein
probable RuBisCo-expression protein CbbX
Probable short-chain type dehydrogenase/reductase (EC 1.-.-.-)
Probable spermidine/putrescine substrate binding protein in Mollicutes
Probable thioesterase involved in non-ribosomal peptide biosynthesis, PA2411 homolog
Probable transcriptional activator for leuABCD operon
Probable transcriptional regulator of trehalose utilization, LuxR family
Probable transcription regulator Mig-14
Probable transcription regulator protein of MDR efflux pump cluster
Probable transmembrane protein
Probable transporter in pyochelin cluster
Probable two-component sensor, near polyamine transporter
Probable valine-pyruvate aminotransferase (EC 2.6.1.66)
Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein (EC 1.14.13.-)
Probable VANILLIN dehydrogenase oxidoreductase protein (EC 1.-.-.-)
Programmed cell death antitoxin ChpS
Programmed cell death antitoxin MazE
Programmed cell death antitoxin PemI
Programmed cell death toxin ChpB
Programmed cell death toxin MazF
Programmed cell death toxin PemK
programmed frameshift-containing
Prokaryotic ubiquitin-like protein Pup
Proline 2-methylase for pyrrolysine biosynthesis
Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)
Proline dipeptidase (EC 3.4.13.9)
Proline iminopeptidase (EC 3.4.11.5)
Proline racemase (EC 5.1.1.4)
Proline reductase for pyrrolysine biosynthesis
Proline/sodium symporter PutP (TC 2.A.21.2.1)
Proline-specific permease proY
Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
Prolyl-tRNA synthetase (EC 6.1.1.15)
Prolyl-tRNA synthetase (EC 6.1.1.15), mitochondrial
Propanediol dehydratase large subunit (EC 4.2.1.28)
Propanediol dehydratase medium subunit (EC 4.2.1.28)
Propanediol dehydratase reactivation factor large subunit
Propanediol dehydratase reactivation factor small subunit
Propanediol dehydratase small subunit (EC 4.2.1.28)
Propanediol diffusion facilitator
Propanediol utilization polyhedral body protein PduA
Propanediol utilization polyhedral body protein PduB
Propanediol utilization polyhedral body protein PduJ
Propanediol utilization polyhedral body protein PduK
Propanediol utilization polyhedral body protein PduN
Propanediol utilization polyhedral body protein PduT
Propanediol utilization polyhedral body protein PduU
Propanediol utilization protein PduL
Propanediol utilization protein PduM
Propanediol utilization protein PduV
Propanediol utilization transcriptional activator
Prophage Clp protease-like protein
Propionate catabolism operon regulatory protein PrpR
Propionate catabolism operon transcriptional regulator of GntR family [predicted]
Propionate--CoA ligase (EC 6.2.1.17)
Propionate kinase (EC 2.7.2.15)
Propionate kinase, propanediol utilization (EC 2.7.2.1)
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)
Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3)
Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3)
Proposed lipoate regulatory protein YbeD
Proposed peptidoglycan lipid II flippase MurJ
ProQ: influences osmotic activation of compatible solute ProP
proteasome-activating AAA-ATPase (PAN)
Proteasome-activating AAA-ATPase (PAN), archaeal
proteasome regulatory subunit p28
proteasome regulatory subunit p29
proteasome regulatory subunit Rpn1
proteasome regulatory subunit Rpn10
proteasome regulatory subunit Rpn11
proteasome regulatory subunit Rpn12
proteasome regulatory subunit Rpn13
proteasome regulatory subunit Rpn2
proteasome regulatory subunit Rpn3
proteasome regulatory subunit Rpn4
proteasome regulatory subunit Rpn5
proteasome regulatory subunit Rpn6
proteasome regulatory subunit Rpn7
proteasome regulatory subunit Rpn8
proteasome regulatory subunit Rpn9
proteasome regulatory subunit Rpt1
proteasome regulatory subunit Rpt2
proteasome regulatory subunit Rpt3
proteasome regulatory subunit Rpt4
proteasome regulatory subunit Rpt5
proteasome regulatory subunit Rpt6
proteasome regulatory subunit S5b
proteasome subunit alpha1 (EC 3.4.25.1)
proteasome subunit alpha2 (EC 3.4.25.1)
proteasome subunit alpha3 (EC 3.4.25.1)
proteasome subunit alpha4 (EC 3.4.25.1)
proteasome subunit alpha5 (EC 3.4.25.1)
proteasome subunit alpha6 (EC 3.4.25.1)
proteasome subunit alpha7 (EC 3.4.25.1)
Proteasome subunit alpha (EC 3.4.25.1), archaeal
Proteasome subunit alpha (EC 3.4.25.1), bacterial
proteasome subunit beta10 (EC 3.4.25.1)
proteasome subunit beta11 (EC 3.4.25.1)
proteasome subunit beta1 (EC 3.4.25.1)
proteasome subunit beta2 (EC 3.4.25.1)
proteasome subunit beta3 (EC 3.4.25.1)
proteasome subunit beta4 (EC 3.4.25.1)
proteasome subunit beta5b (EC 3.4.25.1)
proteasome subunit beta5 (EC 3.4.25.1)
proteasome subunit beta6 (EC 3.4.25.1)
proteasome subunit beta7 (EC 3.4.25.1)
proteasome subunit beta8 (EC 3.4.25.1)
proteasome subunit beta9 (EC 3.4.25.1)
Proteasome subunit beta (EC 3.4.25.1), archaeal
Proteasome subunit beta (EC 3.4.25.1), bacterial
Protein acetyltransferase
Protein araJ precursor
protein arginine methyltransferase type 2 (SDMA formation)
Protein arginine N-methyltransferase 1 (EC 2.1.1.-)
Proteinase activated receptor 1
Proteinase maturation protein (RopA)
Protein A, von Willebrand factor binding protein Spa
Protein BchJ, involved in reduction of C-8 vinyl of divinyl protochlorophyllide
Protein clustered with ethanolamine utilization
Protein containing plastocyanin/azurin family domain
Protein CP12, regulation of Calvin cycle via association/dissociation of PRK/CP12/GAPDH complex
Protein C, protease S01.218
Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)
Protein export cytoplasm protein SecA2 ATPase RNA helicase (TC 3.A.5.1.1)
Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)
Protein-export membrane protein secD (TC 3.A.5.1.1)
Protein-export membrane protein secF (TC 3.A.5.1.1)
Protein FraG required for filament integrity and heterocyst maturation
protein from nitrogen regulatory protein P-II (GLNB) family, ortholog YAAQ B. subtilis
Protein GerPA, required for proper assembly of spore coat, mutations lead to super-dormant spore
Protein GerPB, required for proper assembly of spore coat, mutations lead to super-dormant spore
Protein GerPC, required for proper assembly of spore coat, mutations lead to super-dormant spore
Protein GerPD, required for proper assembly of spore coat, mutations lead to super-dormant spore
Protein GerPE, required for proper assembly of spore coat, mutations lead to super-dormant spore
Protein GerPF, required for proper assembly of spore coat, mutations lead to super-dormant spore
Protein-glutamine gamma-glutamyltransferase (EC 2.3.2.13)
Protein gp10 [Bacteriophage A118]
Protein gp11 [Bacteriophage A118]
Protein gp13 [Bacteriophage A118]
Protein gp14 [Bacteriophage A118]
Protein gp15 [Bacteriophage A118]
Protein gp22 [Bacteriophage A118]
Protein gp23 [Bacteriophage A118]
Protein gp28 [Bacteriophage A118]
Protein gp29 [Bacteriophage A118]
Protein gp30 [Bacteriophage A118]
Protein gp32 [Listeria phage 2389]
Protein gp33 [Bacteriophage A118]
Protein gp34 [Bacteriophage A118]
Protein gp35 [Bacteriophage A118]
Protein gp37 [Bacteriophage A118]
Protein gp38 [Bacteriophage A118]
Protein gp40 [Bacteriophage A118]
Protein gp41 [Bacteriophage A118]
Protein gp43 [Bacteriophage A118]
Protein gp44 [Bacteriophage A118]
Protein gp45 [Bacteriophage A118]
Protein gp47, recombination-related [Bacteriophage A118]
Protein gp49, replication initiation [Bacteriophage A118]
Protein gp51 [Bacteriophage A118]
Protein gp52 [Bacteriophage A118]
Protein gp55 [Bacteriophage A118]
Protein gp59 [Bacteriophage A118]
Protein gp61 [Bacteriophage A118], similar to Listeria protein LmaD
Protein gp63 [Bacteriophage A118]
Protein gp65 [Bacteriophage A118]
Protein gp66 [Bacteriophage A118], similar to Listeria protein LmaC
Protein gp68 [Bacteriophage A118]
Protein gp7 [Bacteriophage A118]
Protein gp8 [Bacteriophage A118]
Protein gp9 [Bacteriophage A118]
Protein G-related alpha 2 macroglobulin-binding protein (GRAB)
Protein hydE
Protein ImpG/VasA
Protein InvG precursor
Protein involved in meta-pathway of phenol degradation
Protein LiaH, similar to phage shock protein A
Protein LiaI
Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)
Protein of avirulence locus ImpE
Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII
Protein of unknown function DUF1009 clustered with KDO2-Lipid A biosynthesis genes
protein of unknown function DUF1403
Protein of unknown function DUF1447
Protein of unknown function DUF156
protein of unknown function DUF1612
protein of unknown function DUF358
Protein of unknown function DUF374
Protein of unknown function DUF414
Protein of unknown function DUF484
Protein of unknown function DUF541
Protein of unknown function DUF81
Protein of unknown function DUF81, SAV0084 homolog
Protein of unknown function identified by role in sporulation (SpoVG)
Protein of unknown function Smg
Protein of unknown function YceH
Protein PE35, involved in regulation of esxAB expression
Protein phosphatase ImpM
[Protein-PII] uridylyltransferase (EC 2.7.7.59)
Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
Protein PufX, involved in assembly of B875 and B800-850 pigment-protein complexes
Protein QA-X
Protein RcsF
Protein RtcB
Protein serine/threonine phosphatase PrpC, regulation of stationary phase
Protein similar to glutamate synthase [NADPH] small chain, clustered with sulfite reductase
Protein SkfG
Protein SkfH
Protein SseB
Protein TadG, associated with Flp pilus assembly
Protein VirD5 in virD operon
Protein with similarity to RtcB
Protein YaiA
Protein YaiI
Protein YcgL
Protein ygiW precursor
Protein YhjJ, putative peptidase
Protein YicC
Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes
Protein YkiA
Proteorhodopsin
Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8)
Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
Proton/aspartate symport protein
Proton/glutamate symport protein
Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1)
Protoporphyrin IX Mg-chelatase subunit H (EC 6.6.1.1)
Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1)
Protoporphyrinogen IX oxidase, aerobic (EC 1.3.3.4)
Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Pro-zeta-carotene desaturase, prolycopene producing (EC 1.-.-.-)
PrpF protein involved in 2-methylcitrate cycle
Pseudaminic acid biosynthesis protein PseA, possible Pse5Ac7Ac acetamidino synthase
Pseudaminic acid cytidylyltransferase (EC 2.7.7.43)
Pseudaminic acid synthase (EC 4.1.3.-)
Pseudouridine 5'-phosphate glycosidase
Pseudouridine kinase, ribokinase/adenosine kinase/pfkB family
Pseudouridine synthase family protein
Psp operon transcriptional activator
Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
PTS system, 3-keto-L-gulonate/L-ascorbate specific IIA component (PtxA)
PTS system, 3-keto-L-gulonate/L-ascorbate specific IIB component (SgaB)
PTS system, 3-keto-L-gulonate/L-ascorbate specific IIC component (SgaT)
PTS system, arbutin-, cellobiose-, and salicin-specific IIBC component (EC 2.7.1.69)
PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69)
PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69)
PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69)
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
PTS system, chitobiose-specific IIA component (EC 2.7.1.69)
PTS system, chitobiose-specific IIB component (EC 2.7.1.69)
PTS system, chitobiose-specific IIC component (EC 2.7.1.69)
PTS system, D-allose-specific IIA component (EC 2.7.1.69)
PTS system, D-allose-specific IIB component (EC 2.7.1.69)
PTS system, D-allose-specific IIC component (EC 2.7.1.69)
PTS system, fructose- and mannose-inducible IIA component (EC 2.7.1.69)
PTS system, fructose- and mannose-inducible IIB component (EC 2.7.1.69)
PTS system, fructose- and mannose-inducible IIC component (EC 2.7.1.69)
PTS system, fructose- and mannose-inducible IID component (EC 2.7.1.69)
PTS system, fructose- and mannose-inducible putative EII component
PTS system, fructose-specific IIA component (EC 2.7.1.69)
PTS system, fructose-specific IIB component (EC 2.7.1.69)
PTS system, fructose-specific IIC component (EC 2.7.1.69)
PTS system, galactitol-specific IIA component (EC 2.7.1.69)
PTS system, galactitol-specific IIB component (EC 2.7.1.69)
PTS system, galactitol-specific IIC component (EC 2.7.1.69)
PTS system, galactosamine-specific IIB component (EC 2.7.1.69)
PTS system, galactosamine-specific IIC component (EC 2.7.1.69)
PTS system, galactosamine-specific IID component (EC 2.7.1.69)
PTS system, galactose-inducible IIA component (EC 2.7.1.69)
PTS system, galactose-inducible IIB component (EC 2.7.1.69) / PTS system, galactose-inducible IIC component (EC 2.7.1.69)
PTS system, galactose-specific IIA component (EC 2.7.1.69)
PTS system, galactose-specific IIB component (EC 2.7.1.69)
PTS system, galactose-specific IIC component (EC 2.7.1.69)
PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)
PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)
PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)
PTS system, glucose-specific IIA component (EC 2.7.1.69)
PTS system, glucose-specific IIBC component (EC 2.7.1.69)
PTS system, glucose-specific IIB component (EC 2.7.1.69)
PTS system, glucose-specific IIC component (EC 2.7.1.69)
PTS system, lactose-specific IIA component (EC 2.7.1.69)
PTS system, lactose-specific IIB component (EC 2.7.1.69)
PTS system, lactose-specific IIC component (EC 2.7.1.69)
PTS system, maltose and glucose-specific IIA component (EC 2.7.1.69)
PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69)
PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69)
PTS system, mannitol-specific cryptic IIA component (EC 2.7.1.69)
PTS system, mannitol-specific cryptic IIB component (EC 2.7.1.69)
PTS system, mannitol-specific cryptic IIC component (EC 2.7.1.69)
PTS system, mannitol-specific IIA component (EC 2.7.1.69)
PTS system, mannitol-specific IIB component (EC 2.7.1.69)
PTS system, mannitol-specific IIC component (EC 2.7.1.69)
PTS system, mannose-specific IIA component (EC 2.7.1.69)
PTS system, mannose-specific IIB component (EC 2.7.1.69)
PTS system, mannose-specific IIC component (EC 2.7.1.69)
PTS system, mannose-specific IID component (EC 2.7.1.69)
PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)
PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
PTS system, N-acetylmuramic acid-specific IIB component (EC 2.7.1.69)
PTS system, N-acetylmuramic acid-specific IIC component (EC 2.7.1.69)
PTS system, sorbose-specific IIA component (EC 2.7.1.69)
PTS system, sorbose-specific IIB component (EC 2.7.1.69)
PTS system, sorbose-specific IIC component (EC 2.7.1.69)
PTS system, sorbose-specific IID component (EC 2.7.1.69)
PTS system, sucrose-specific IIA component (EC 2.7.1.69)
PTS system, sucrose-specific IIB component (EC 2.7.1.69)
PTS system, sucrose-specific IIB component (EC 2.7.1.69) / PTS system, sucrose-specific IIC component (EC 2.7.1.69) / PTS system, sucrose-specific IIA component (EC 2.7.1.69)
PTS system, sucrose-specific IIC component (EC 2.7.1.69)
PTS system, tagatose-specific IIA-TPr component (EC 2.7.1.69)
PTS system, tagatose-specific IIBC component (EC 2.7.1.69)
PTS system, trehalose-specific IIA component (EC 2.7.1.69)
PTS system, trehalose-specific IIB component (EC 2.7.1.69)
PTS system, trehalose-specific IIC component (EC 2.7.1.69)
PUA-PAPS reductase like fusion
puatative hemin transporter subunit
Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'
Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'
Purine cyclase-related protein
Purine nucleoside phosphorylase (EC 2.4.2.1)
Purine trans deoxyribosylase (Nucleoside deoxyribosyltransferase-I) (EC 2.4.2.6)
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
Putative 2-keto-3-deoxygluconate kinase (EC 2.7.1.45)
Putative 3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase oxidoreductase protein (EC 1.1.1.50)
Putative 3-hydroxyacyl-coa dehydrogenase
putative 3-hydroxyphenylpropionic acid porine
putative 4-hydroxybenzoyl-CoA thioesterase
Putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase oxidoreductase protein (EC 1.2.1.60)
Putative ABC transporter ATP-binding protein, spy1790 homolog
Putative ABC transporter (ATP-binding protein), spy1791 homolog
Putative ABC transporter of substrate X, ATP-binding subunit
Putative ABC transporter of substrate X, permease subunit I
Putative ABC transporter of substrate X, permease subunit II
Putative ABC-type amino-acid transporter permease protein
Putative activity regulator of membrane protease YbbK
Putative acyl-CoA dehydrogenase oxidoreductase (EC 1.3.99.3), may be related to NAD-dependent histone acetylation
Putative Acyl-CoA thiolase
putative Adenosine kinase (EC 2.7.1.20)
Putative aldolase YdjI
putative alkaline phosphatase-like protein
Putative alkylsulfatase (EC 1.14.11.17)
Putative amidotransferase (Type 1 glutamine amidotransferase - GATase1)
Putative analog of CcoH, COG3198
Putative antibiotic transport-associated protein
Putative anti-sigma factor antagonist
Putative arylsulfatase regulatory protein
Putative ATP-binding component of ABC transporter involved in cytochrome c biogenesis
putative ATP-dependent DNA helicase YjcD
Putative AUX1-like permease
Putative bacterial haemoglobin
Putative Bax protein
Putative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28)
Putative beta-galactosidase in 4-hydroxyproline catabolic gene cluster
putative beta-hydroxyisobutyryl-CoA mutase similar to methylmalonyl-CoA mutase
Putative binding protein ygiS precursor
Putative capsular polysaccharide transport protein YegH
Putative carbohydrate kinase in cluster with fructose-bisphosphate aldolase
Putative carbohydrate PTS system, IIA component (EC 2.7.1.69)
Putative carbohydrate PTS system, IIB component (EC 2.7.1.69)
Putative carbohydrate PTS system, IIC component (EC 2.7.1.69)
putative carboxysome peptide A
putative carboxysome peptide B
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase (EC 2.7.8.-)
Putative CDP-glycosylpolyol phosphate:glycosylpolyol glycosylpolyolphosphotransferase
Putative cell division protein precursor
Putative chaperon-like protein Ycf39 for quinone binding in Photosystem II
Putative CoA-transferase subunit alpha Rv3551/MT3655 (EC 2.8.3.-)
Putative CoA-transferase subunit beta Rv3552/MT3656 (EC 2.8.3.-)
Putative conjugative transposon mobilization protein BF0132
Putative copper metallochaperone, cytochrome oxidase biogenesis protein Cox19
Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster
putative CRISPR associated hypothetical protein
Putative curli production protein CsgC
putative Cytochrome bd2, subunit I
putative Cytochrome bd2, subunit II
Putative cytochrome c biogenesis factor, archaeal
Putative cytochrome C-type biogenesis protein
Putative cytochrome c-type biogenesis protein related to CcmF
Putative cytochrome P450 125 (EC 1.14.-.-)
putative cytochrome P450 hydroxylase
putative cytochrome p450 oxidoreductase
Putative cytoplasmic protein clustered with trehalase
Putative cytoplasmic protein ,probably associated with Glutathione-regulated potassium-efflux
Putative deacetylase YgeY
Putative DeoR-type transcriptional regulator, eco:b4191 ortholog
Putative deoxyribonuclease similar to YcfH, type 2
Putative deoxyribonuclease similar to YcfH, type 3
Putative deoxyribonuclease similar to YcfH, type 4
Putative deoxyribonuclease similar to YcfH, type 5
Putative deoxyribonuclease YcfH
Putative deoxyribonuclease YjjV
Putative deoxyribose-specific ABC transporter, ATP-binding protein
Putative deoxyribose-specific ABC transporter, permease protein
Putative DHNTP pyrophosphatase
Putative diaminopropionate ammonia-lyase (EC 4.3.1.15)
Putative diheme cytochrome c-553
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Putative dihydroxyacetone kinase (EC 2.7.1.29), ADP-binding subunit
Putative dihydroxyacetone kinase (EC 2.7.1.29), dihydroxyacetone binding subunit
Putative dipeptidase, pyoverdin biosynthesis PvdM
Putative DNA-binding protein in cluster with Type I restriction-modification system
Putative DNA helicase, superantigen-encoding pathogenicity islands SaPI
Putative effector protein OrgC of SPI-1 type III secretion system
Putative efflux (PET) family inner membrane protein YccS
Putative EsaC protein analog (Listeria type 1)
Putative EsaC protein analog (Listeria type 2)
Putative EsaC protein analog (Listeria type 3)
Putative EsaC protein analog (Listeria type 4)
Putative ESAT-secreted protein, BA2187 homolog
Putative ESAT-secreted protein, BA2188 homolog
Putative ESAT-secreted protein, BA2189 homolog
putative esterase
Putative esterase
Putative esterase, FIGfam005057
Putative ESX-1 secretion system component Rv3869
Putative ESX-1 secretion system component Rv3877
Putative ESX-1 secretion system gating protein PPE68
Putative exported protein clustered with Gamma-glutamyltranspeptidase
putative facilitator of salicylate uptake
putative Fe-S, FMN containing oxidoreductase
Putative fibronectin domain-containing lipoprotein
Putative formate dehydrogenase, cytochrome B subunit (EC 1.2.1.2)
Putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Putative formate dehydrogenase oxidoreductase protein
Putative formate dehydrogenase-specific chaperone
Putative fumarylacetoacetate (FAA) hydrolase
Putative glucanase glgE (EC 3.2.1.-)
Putative glutamine synthetase, Rickettsiales type (EC 6.3.1.2)
putative Glutathione-regulated potassium-efflux system protein KefB
Putative glutathione transporter, ATP-binding component
Putative glutathione transporter, permease component
Putative glutathione transporter,solute-binding component
Putative gluthatione transporter,solute-binding component
putative glycerate kinase
Putative glycogen debranching enzyme, archaeal type, TIGR01561
Putative glycosyl/glycerophosphate transferase in teichoic acid biosynthesis
Putative glycosyltransferase
Putative glycosyltransferase involved in O-methyl phosphoramidate capsule modification
putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide
putative glycosyltransferase protein
Putative glycosyltransferase protein
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter
Putative GTP-binding protien TM0445
putative GTP pyrophosphokinase
Putative heat shock protein YegD
Putative heme iron utilization protein
Putative heme oxygenase
Putative Heme-regulated two-component response regulator
Putative hemin-binding lipoprotein
Putative hemine transporter ATP-binding subunit
putative hemin permease
Putative high-affinity iron permease
Putative histidine ammonia-lyase protein
Putative Holliday junction resolvase
Putative Holliday junction resolvase (EC 3.1.-.-)
Putative homoserine kinase type II, PnuC-associated, THI-regulated branch
Putative HTH-type transcriptional regulator YdjF
Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR
Putative hydroxycinnamate transporter
Putative inner membrane protein YjeT (clustered with HflC)
Putative insecticidal toxin complex
Putative IpgF protein
Putative iron compound-binding protein of ABC transporter family
Putative iron compound permease protein of ABC transporter family
Putative iron compound receptor
Putative iron-containing NADPH-dependent propanol dehydrogenase
Putative iron-regulated membrane protein in piochelin gene cluster
Putative iron-regulated membrane protein, PA2403 homolog
Putative iron-uptake ABC transport system ATP-binding protein
putative isobutyryl-CoA mutase, chain B
Putative Isoquinoline 1-oxidoreductase subunit, Mll3835 protein
Putative L-ascorbate 6-phosphate lactonase (EC 3.1.1.-)
putative L-glutamate ligase
Putative lipase in cluster with Phosphatidate cytidylyltransferase
Putative lipoprotein of ferric iron transporter system
Putative lipoprotein required for motility
Putative lipoprotein, similar to CjrA of Escherichia coli O164
Putative long tail fibre [Bacteriophage A118]
Putative major teichoic acid biosynthesis protein C
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425
Putative membrane-bound ClpP-class protease associated with aq_911
Putative membrane protein, clustering with ActP
Putative membrane protein, clustering with ActP PaaL
putative membrane protein, involved in stability of MscS mechanosensitive channel
Putative membrane protein precursor SPs0273
Putative membrane protein (Putative integral membran resistance protein)
Putative membrane protein Q2 colocalized with Q
Putative membrane protein YeiH
Putative membrane transporter ATPase,YhiD
Putative metallopeptidase (Zinc) SprT family
Putative methyltransferase,bldM, influences various aspects of colony growth and development
Putative mobilization protein BF0133
Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase
Putative N-carbamyl-L-cysteine amidohydrolase
Putative n-hydroxybenzoate hydroxylase
Putative Nudix hydrolase YfcD (EC 3.6.-.-)
Putative oligoketide cyclase/lipid transport protein
Putative OMR family iron-siderophore receptor precursor
Putative outer membrane lipoprotein YmcA
Putative outer membrane siderophore receptor
Putative oxidoreductase ferredoxin-type protein, clusters with CPO
Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
Putative oxidoreductase in arabinose utilization cluster
Putative oxidoreductase in putrescine utilization cluster
Putative oxidoreductase YcjS (EC 1.-.-.-), NADH-binding
Putative oxidoreductase YdjL
Putative oxidoreductase YeaE, aldo/keto reductase family
Putative parvulin type peptidyl-prolyl isomerase, similarity with PrsA foldase
putative patatin-like phospholipase
putative peptide transport system secreted peptide-binding protein
Putative peptidoglycan bound protein (LPXTG motif) Lin0141 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lin2281 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0159 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0160 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0175 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0320 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0435 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0463 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0550 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0627 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0835 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0842 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo0880 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo1115 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo1413 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo1666 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo1799 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo2085 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo2178 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo2179 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo2576 homolog
Putative peptidoglycan bound protein (LPXTG motif) Lmo2714 homolog
Putative peptidoglycan bound protein (LPXTG motif) LMOf2365_1974 homolog
Putative peptidoglycan hydrolase YvbX, NOT involved in spore germination
Putative periplasmic phosphate-binding protein PstS (Mycoplasma type)
Putative periplasmic phosphate-binding protein PstS, Mycoplasma type
putative permease of ferrichrome ABC transporter
Putative permease often clustered with de novo purine synthesis
Putative permease PerM (= YfgO)
Putative pheromone cAM373 precursor lipoprotein CamS
Putative pheromone precursor lipoprotein
Putative phopsphoesterase or exonuclease
Putative phosphate ABC transporter, phosphate-binding component
Putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase, C-terminal domain
Putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase, N-terminal domain
Putative phosphoesterase, GBAA2539 homolog
Putative photosynthetic complex assembly protein
Putative phthalate 4,5-dioxygenase oxygenase subunit (OhpA2)
Putative phthalate 4,5-dioxygenase reductase subunit (OhpA1)
Putative pimeloyl-CoA dehydrogenase (Small subunit), PimD-like (EC 1.3.99.-)
Putative polyribitolphosphotransferase
Putative polysaccharide export protein YccZ precursor
putative polysialic acid transport protein
putative porin for vanillate trafficking (VanP)
Putative predicted metal-dependent hydrolase
Putative prenyltransferase, contains 1,4-dihydroxy-2-naphthoate octaprenyltransferase domain
Putative preQ0 transporter
Putative primase, superantigen-encoding pathogenicity islands SaPI
Putative purine permease YgfO
Putative reductase (alkanesulfonate metabolism)
Putative regulator of the mannose operon, ManO
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5)
putative ribosomal protein, YsxB-like
putative ribosomal protein, YsxB-like, Ureaplasma variant
Putative ribosomal RNA methyltransferase Nop2 (EC 2.1.1.-) (Nucleolar protein 2)
Putative RNA-binding protein COG1094
putative RNA polymerase sigma factor
Putative secretion accessory protein EsaA/YueB
Putative secretion accessory protein EsaB/YukD
Putative secretion system component EssA
Putative secretion system component EssB/YukC
Putative sensor-like histidine kinase YfhK
Putative sensory histidine kinase YfhA
Putative short tail fibre [Bacteriophage A118]
Putative siderophore biosynthetic enzyme
Putative SigmaB asociated two-component system sensor protein
Putative signal peptidase I (EC 3.4.21.89)
Putative silver efflux pump
putative sodium-dependent bicarbonate transporter
Putative spore germination protein, GerB family
Putative stomatin/prohibitin-family membrane protease subunit aq_911
Putative stomatin/prohibitin-family membrane protease subunit YbbK
Putative subunit of NAD(P)H:quinone oxidoreductase
Putative succinate dehydrogenase cytochrome b subunit
putative succinate dehydrogenase [membrane anchor subunit] (succinic dehydrogenase)
Putative sucrose phosphorylase (EC 2.4.1.7)
Putative sugar ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
Putative sugar ABC transport system, periplasmic binding protein YtfQ precursor
Putative sugar ABC transport system, permease protein YjfF
Putative sugar ABC transport system, permease protein YtfT
Putative sugar isomerase involved in processing of exogenous sialic acid
Putative sugar nucleotidyltransferase
Putative sugar transporter
Putative sulfate permease
Putative symporter in putrescine utilization cluster
Putative tagatose-6-phosphate ketose/aldose isomerase (EC 5.3.1.-)
Putative tail or base plate protein gp17 [Bacteriophage A118]
Putative tail or base plate protein gp18 [Bacteriophage A118]
Putative tail or base plate protein gp19 [Bacteriophage A118]
Putative TEGT family carrier/transport protein
Putative teichuronic acid biosynthesis glycosyl transferase TuaC
Putative teichuronic acid biosynthesis glycosyl transferase TuaH
Putative terminase, superantigen-encoding pathogenicity islands SaPI
Putative thiamine pyrophosphate-requiring enzyme, PA2404 homolog
Putative thiol:disulfide oxidoreductase involved in cytochrome C-type biogenesis
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly
putative TolA function
Putative TolA protein
Putative TolA protein involved in Tol transport system in Chlamydia
Putative TonB-dependent heme receptor HasR
Putative Ton-B dependent hemine receptor
Putative tonB protein
Putative toxin component near putative ESAT-related proteins, repetitive
Putative transcriptional regulator of sorbose uptake and utilization genes
Putative transition state regulator Abh
Putative transmembrane protein
Putative transport protein YdjK, MFS superfamily
Putative tricarboxylic transport TctC
Putative two-component response regulator
Putative two-component response regulator and GGDEF family protein YeaJ
Putative two-component sensor histidine kinase
Putative two component system histidine kinase YedV
Putative two-component system response regulator YedW
Putative two-domain glycosyltransferase
Putative type III secretion apparatus precursor
putative type III secretion protein
putative type III secretion protein SycN
putative type III secretion protein YscX
Putative type III secretion system apparatus protein
putative type III secretion system EscC protein
putative type III secretion system lipoprotein precursor EprK
Putative uncharacterized protein
Putative uncharacterized protein BCG_3611
Putative uncharacterized protein BCG_3619c
Putative uncharacterized protein (Hypothetical short-chain type dehydrogenase/reductase)
Putative uncharacterized protein in cluster with two glycosyl transferases
Putative uncharacterized protein TTHA1760
Putative uncharacterized protein ygiA
Putative uncharacterized protein YmcB
putative uricase
Putative xanthine dehydrogenase yagS, FAD binding subunit (EC 1.17.1.4)
Putative xanthosine permease
Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster
Putrescine ABC transporter putrescine-binding protein potF (TC 3.A.1.11.2)
Putrescine aminotransferase (EC 2.6.1.82)
Putrescine carbamoyltransferase (EC 2.1.3.6)
Putrescine importer
Putrescine-ornithine antiporter
Putrescine/proton symporter, putrescine/ornithine antiporter PotE
Putrescine transport ATP-binding protein potG (TC 3.A.1.11.2)
Putrescine transport system permease protein potH (TC 3.A.1.11.2)
Putrescine transport system permease protein potI (TC 3.A.1.11.2)
Putrescine utilization regulator
PutR, transcriptional activator of PutA and PutP
PvcA protein, related to known isonitrile synthases
PvcB protein, related to amino acid oxidizing enzymes
PvcC protein, related to two-component flavin adenine dinucleotide-dependent monooxygenases
PvcD protein, related to two-component flavin adenine dinucleotide-dependent monooxygenases
PvdE, pyoverdine ABC export system, fused ATPase and permease components
PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV)
Pyochelin biosynthetic protein PchA, isochorismate synthase (EC 5.4.4.2)
Pyochelin biosynthetic protein PchB
Pyochelin biosynthetic protein PchC, predicted thioesterase
Pyochelin biosynthetic protein PchG, oxidoreductase (NAD-binding)
Pyochelin synthetase PchE, non-ribosomal peptide synthetase module
Pyochelin synthetase PchF, non-ribosomal peptide synthetase module
Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76)
Pyoverdin biosynthesis protein PvdN, putative aminotransferase, class V
Pyoverdine biosynthesis related protein PvdP
Pyoverdine chromophore precursor synthetase PvdL
Pyoverdine efflux carrier and ATP binding protein
Pyoverdine sidechain non-ribosomal peptide synthetase PvdD
Pyoverdine sidechain non-ribosomal peptide synthetase PvdI
Pyoverdine sidechain non-ribosomal peptide synthetase PvdJ
pyoverdine-specific efflux macA-like protein
Pyoverdine synthetase PvdF, N5-hydroxyornithine formyltransferase
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Pyridoxal 4-dehydrogenase (EC 1.1.1.107)
Pyridoxal kinase (EC 2.7.1.35)
Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)
Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein
Pyridoxine 4-oxidase (EC 1.1.3.12)
Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Pyrimidine ABC transporter, ATP-binding protein
Pyrimidine ABC transporter, substrate-binding component
Pyrimidine ABC transporter, transmembrane component 1
Pyrimidine ABC transporter, transmembrane component 2
Pyrimidine deaminase archaeal predicted (EC 3.5.4.26)
Pyrimidine deaminase archaeal predicted (EC 3.5.4.26) type 2
Pyrimidine deaminase eukaryotic (EC 3.5.4.26)
Pyrimidine deoxynucleoside triphosphate (dYTP) pyrophosphohydrolase YfoO
Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)
Pyrimidine operon regulatory protein PyrR
Pyrophosphate-energized proton pump (EC 3.6.1.1)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit (EC 2.7.1.90)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, beta subunit (EC 2.7.1.90)
Pyrophosphate-specific outer membrane porin OprO
Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
Pyrroline-5-carboxylate reductase (EC 1.5.1.2)
Pyrroline-5-carboxylate reductase (EC 1.5.1.2), ProG-like
pyrrolysine-containing
Pyrrolysine synthetase
Pyrrolysyl-tRNA synthetase (EC 6.1.1.25)
Pyruvate carboxyl transferase (EC 6.4.1.1)
Pyruvate carboxyl transferase subunit A (EC 6.4.1.1)
Pyruvate carboxyl transferase subunit B (EC 6.4.1.1)
Pyruvate decarboxylase (EC 4.1.1.1)
Pyruvate dehydrogenase E1 component alpha subunit (EC 1.2.4.1)
Pyruvate dehydrogenase E1 component beta subunit (EC 1.2.4.1)
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Pyruvate:ferredoxin oxidoreductase, alpha subunit (EC 1.2.7.1)
Pyruvate:ferredoxin oxidoreductase, beta subunit (EC 1.2.7.1)
Pyruvate:ferredoxin oxidoreductase, delta subunit (EC 1.2.7.1)
Pyruvate:ferredoxin oxidoreductase, gamma subunit (EC 1.2.7.1)
Pyruvate:ferredoxin oxidoreductase, porE subunit (EC 1.2.7.1)
Pyruvate:ferredoxin oxidoreductase, porF subunit (EC 1.2.7.1)
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Pyruvate formate-lyase (EC 2.3.1.54)
Pyruvate kinase (EC 2.7.1.40)
Pyruvate oxidase, CidC
Pyruvate oxidase (EC 1.2.3.3)
Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)
(Pyruvate) Oxoisovalerate Dehydrogenase Alpha & Beta Fusion like
Pyruvate phosphate dikinase
Pyruvate,phosphate dikinase (EC 2.7.9.1)
Pyruvate synthase subunit porB (EC 1.2.7.1)
QscR quorum-sensing control repressor
Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76)
Queuosine Biosynthesis QueC ATPase
Queuosine biosynthesis QueD, PTPS-I
Queuosine Biosynthesis QueE Radical SAM
Quinate permease
Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25)
Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25)
Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
Quinolinate synthetase (EC 4.1.99.-)
Quinol oxidase-2, subunit II (SoxH)
Quinol oxidase-2, sulfocyanin (blue copper protein) (SoxE)
quinol oxidase polypeptide III QoxC (EC:1.9.3.-)
quinol oxidase polypeptide II QoxA (EC:1.9.3.-)
quinol oxidase polypeptide I QoxB (EC:1.9.3.-)
quinol oxidase polypeptide IV QoxD (EC:1.9.3.-)
Quinol oxidase (SoxABC), cytochrome aa3 subunit (SoxB)
Quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit
Quinone-reactive Ni/Fe-hydrogenase large chain (EC 1.12.5.1)
Quinone-reactive Ni/Fe-hydrogenase small chain precursor (EC 1.12.5.1)
quinone-reactive Ni/Fe-hydrogenase, small subunit
quinoprotein alcohol dehydrogenase
Quorum-sensing regulator of virulence HapR
Quorum-sensing transcriptional activator YpeR
Quorum-sensing transcriptional activator YspR
(R)-2-hydroxyacid dehydrogenase, similar to L-sulfolactate dehydrogenase (EC 1.1.1.272)
(R)-3-hydroxydecanoyl-ACP:CoA transacylase PhaG (3-hydroxyacyl-CoA-acyl carrier protein transferase) (EC 2.4.1.-)
Radical SAM domain heme biosynthesis protein
Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB
Radical SAM family protein HutW, similar to coproporphyrinogen III oxidase, oxygen-independent, associated with heme uptake
Raffinose operon transcriptional regulatory protein RafR
RAP interaction protein alpha
Rare lipoprotein A precursor
(R)-benzylsuccinyl-CoA dehydrogenase (EC 1.3.99.21)
RbmA protein
RbmD, similar to Lipid A core - O-antigen ligase and related enzymes
(R)-citramalate synthase (EC 2.3.1.182)
RD1 region associated protein Rv3865
RD1 region associated protein Rv3866
RD1 region associated protein Rv3867
RD1 region associated protein Rv3876
RD1 region associated protein Rv3878
RD1 region associated protein Rv3879c
RecA protein
Recombinational DNA repair protein RecT (prophage associated)
Recombination inhibitory protein MutS2
Recombination protein RecR
Recombination protein RecU
Red chlorophyll catabolite reductase (EC 1.-.-.-)
Redox-sensitive transcriptional activator SoxR
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
Regulation of D-alanyl-lipoteichoic acid biosynthesis, DltR
Regulation of D-alanyl-lipoteichoic acid biosynthesis, sensor histidine kinase
Regulator of carotenoid biosynthesis
regulator of length of O-antigen component of lipopolysaccharide chains
Regulator of nucleoside diphosphate kinase
Regulator of polyketide synthase expression
regulator protein,AreR
regulator protein,SalR
Regulatory protein BlaR1
Regulatory protein (induces abgABT, used to catabolize p-aminobenzoyl-glutamate)
Regulatory protein LuxO
Regulatory protein recX
Regulatory protein RsaL
Regulatory protein SoxS
Regulatory protein SusR
Regulatory small RNA involved in iron homeostasis RyhB
Related to Dihydropteroate synthase
RelB protein (antitoxin to RelE)
RelE antibacterial toxin protein
repetative hypothetical protein , fig|282458.1.peg.574 homolog
Repetitive hypothetical protein in ESAT cluster, BH0979 homolog
Repetitive hypothetical protein near ESAT cluster, SA0282 homolog
Replication factor A (ssDNA-binding protein)
Replication factor C large subunit
Replication factor C small subunit
Replication initiation protein, topisomerase
Replicative DNA helicase (EC 3.6.1.-)
Replicative DNA helicase (EC 3.6.1.-); intein-containing
Replicative DNA helicase (EC 3.6.1.-) [SA14-24]
Repressor (CI-like) [Bacteriophage A118]
Repressor (cro-like) [Bacteriophage A118]
required for Yop secretion
Resolvase/integrase Bin
Resolvase/Integrase TinR protein
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
Respiratory nitrate reductase delta chain (EC 1.7.99.4)
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4)
Response regulator BaeR
response regulator in two-component regulatory system with PhoQ
Response regulator LiaR
Response regulator NasT
Response regulator of the competence regulon ComE
Response regulator of zinc sigma-54-dependent two-component system
Response regulator SypE
Response regulator VieA
Response regulator VieB
Retinal dehydrogenase 2 (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2)
rhamnogalacturonan acetylesterase
Rhamnogalacturonides degradation protein RhiN
Rhamnogalacturonide transporter RhiT
Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase RhlG (EC 1.1.1.100)
Rhamnulokinase (EC 2.7.1.5)
Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
RHH DNA-binding protein VirC2, promotes T-DNA transfer
RhlA, 3-(3-hydroxyalkanoyloxy)alkanoic acids (HAAs) synthase
RhlB, TDP-rhamnosyltransferase 1 (EC 2.4.1.-)
RhlC, TDP-rhamnosyltransferase 2 (EC 2.4.1.-)
Rhodanese-like domain protein
Rhodanese-related sulfurtransferase
ribitol-5-phosphate cytidylyltransferase (EC 2.7.7.40)
Riboflavin kinase (EC 2.7.1.26)
Riboflavin synthase alpha chain (EC 2.5.1.9)
Riboflavin synthase archaeal (EC 2.5.1.9)
Riboflavin transporter PnuX
Ribokinase (EC 2.7.1.15)
Ribonuclease BN (EC 3.1.-.-)
Ribonuclease D (EC 3.1.26.3)
Ribonuclease E (EC 3.1.4.-)
Ribonuclease E inhibitor RraA
Ribonuclease HI (EC 3.1.26.4)
Ribonuclease HII (EC 3.1.26.4)
Ribonuclease HIII (EC 3.1.26.4)
Ribonuclease HI-related protein
Ribonuclease HI-related protein 2
Ribonuclease HI-related protein 3
Ribonuclease HI, Vibrio paralog
Ribonuclease III (EC 3.1.26.3)
Ribonuclease I precursor (EC 3.1.27.6)
Ribonuclease M5 (EC 3.1.26.8)
Ribonuclease PH (EC 2.7.7.56)
Ribonuclease P protein component 1 (EC 3.1.26.5)
Ribonuclease P protein component 2 (EC 3.1.26.5)
Ribonuclease P protein component 3 (EC 3.1.26.5)
Ribonuclease P protein component 4 (EC 3.1.26.5)
Ribonuclease P protein component (EC 3.1.26.5)
Ribonucleases P/MRP protein subunit POP1 (EC 3.1.26.5)
Ribonucleases P/MRP protein subunit POP6 (EC 3.1.26.5)
Ribonucleases P/MRP protein subunit POP7 (EC 3.1.26.5)
Ribonucleases P/MRP protein subunit POP8 (EC 3.1.26.5)
Ribonuclease T (EC 3.1.13.-)
Ribonuclease Z (EC 3.1.26.11)
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Ribonucleotide reductase transcriptional regulator NrdR
Ribonucleotide reduction protein NrdI
Ribose-1,5-bisphosphate isomerase
Ribose 1,5-bisphosphate or 5-ribose-1,2-cyclic phosphate dehydrogenase
Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Ribose 5-phosphate isomerase B (EC 5.3.1.6)
Ribose ABC transporter, periplasmic ribose-binding protein rbsB (TC 3.A.1.2.1)
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Ribose operon repressor
Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)
Ribose/xylose/arabinose/galactoside ABC-type transport systems, ATP-binding protein (EC 3.6.3.17)
Ribose/xylose/arabinose/galactoside ABC-type transport systems, periplasmic sugar binding protein
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2
Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
Ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-)
Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)
Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
Ribosomal protein L11 methyltransferase (EC 2.1.1.-)
Ribosomal protein L3 methyltransferase
ribosomal protein L7Ae family protein
Ribosomal-protein-L7p-serine acetyltransferase
Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)
Ribosomal-protein-S5p-alanine acetyltransferase
Ribosomal protein S6 glutaminyl transferase
Ribosomal protein S6 kinase alpha 5 (EC 2.7.11.1)
Ribosomal RNA large subunit methyltransferase J (EC 2.1.1.-)
Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)
Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)
Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-)
Ribosomal small subunit pseudouridine synthase A
Ribosomal subunit interface protein
Ribosome-associated heat shock protein
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
Ribosome-binding factor A
Ribosome biogenesis protein Nop10
Ribosome hibernation protein YfiA
Ribosome hibernation protein YhbH
Ribosome modulation factor
Ribosome protection-type tetracycline resistance related proteins
Ribosome protection-type tetracycline resistance related proteins, group 2
Ribosome recycling factor
Ribosome small subunit-stimulated GTPase EngC
Ribosylnicotinamide kinase (EC 2.7.1.22)
Ribosylnicotinamide kinase, eukaryotic (EC 2.7.1.22)
Ribosyl nicotinamide transporter, PnuC-like
Ribulokinase (EC 2.7.1.16)
ribulose 1,5-bisphosphate carboxylase/oxygenase activase
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39)
Ribulose bisphosphate carboxylase (EC 4.1.1.39)
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39)
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39)
Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13)
RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)
RNA binding methyltransferase FtsJ like
RNA binding protein, contains ribosomal protein S1 domain
RNA-binding protein Hfq
RNA helicase, putative
RNA methyltransferase, TrmA family
RNA methyltransferase, TrmH family, group 1
RNA:NAD 2'-phosphotransferase
RNA polymerase associated protein RapA (EC 3.6.1.-)
RNA polymerase principal sigma factor HrdA
RNA polymerase principal sigma factor HrdC
RNA polymerase principal sigma factor HrdD
RNA polymerase sigma-54 factor RpoN
RNA polymerase sigma-70 factor, ECF family
RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-E factor
RNA polymerase sigma factor for flagellar operon
RNA polymerase sigma factor RpoD
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor RpoH
RNA polymerase sigma factor RpoH-related protein
RNA polymerase sigma factor RpoH-related protein RpoH2
RNA polymerase sigma factor RpoH-related protein RpoH3
RNA polymerase sigma factor RpoS
RNA polymerase sigma factor SigB
RNA polymerase sigma factor SigV
RNA polymerase sigma factor SigW
RNA polymerase sigma factor SigZ
RNA polymerase sigma-H factor AlgT
RNA polymerase sporulation specific sigma factor SigE
RNA polymerase sporulation specific sigma factor SigF
RNA polymerase sporulation specific sigma factor SigG
RNA polymerase sporulation specific sigma factor SigH
RNA polymerase sporulation specific sigma factor SigK
RNase L inhibitor
rna synthesis, modification , dna transcription
RND efflux system, inner membrane transporter CmeB
RND efflux system, membrane fusion protein CmeA
RND efflux system, outer membrane lipoprotein CmeC
RND efflux system, outer membrane lipoprotein, NodT family
Rod shape-determining protein MreB
Rod shape-determining protein MreC
Rod shape-determining protein MreD
Rod shape-determining protein RodA
RopB
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
Rrf2 family transcriptional regulator
Rrf2 family transcriptional regulator, group III
rRNA biogenesis protein Nop5/Nop56
RsbR, positive regulator of sigma-B
RsbS, negative regulator of sigma-B
RstA phage-related replication protein
RstA phage-related replication protein, frameshift
RstA phage-related replication protein, truncated
RstB phage-related integrase
RstC phage-related antirepressor
RstR phage-related transcriptional repressor
Rubisco activation protein CbbO
Rubisco activation protein CbbQ
RuBisCO operon transcriptional regulator
RuBisCO operon transcriptional regulator CbbR
Rubredoxin
Rubredoxin-NAD(+) reductase (EC 1.18.1.1)
rubredoxin-oxygen oxidoreductase
Rubrerythrin
(S)-1-phenylethanol dehydrogenase
S1 RNA binding domain protein
(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase
(S)-3-O-geranylgeranylglyceryl phosphate synthase
SA_27: YycH protein
Saccharopine dehydrogenase (EC 1.5.1.9)
Saccharopine dehydrogenase [NAD+, L-lysine-forming] (EC 1.5.1.7)
Saccharopine dehydrogenase [NADP , L-glutamate-forming] (EC 1.5.1.10)
S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B
S-adenosylmethionine-dependent methyltransferase Functionally Coupled to the MukBEF Chromosome Partitioning Mechanism
S-adenosylmethionine synthetase (EC 2.5.1.6)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
S-adenosyl-methyltransferase MraW (EC 2.1.1.-)
SAG1025 homolog within ESAT-6 gene cluster
Salicylaldehyde dehydrogenase (EC 1.2.1.65)
salicylate esterase
Salicylate hydroxylase (EC 1.14.13.1)
salvage of nucleosides and nucleotides
SAM-dependent methlytransferase UbiG
SAM-dependent methlytransferase YrrT
SAM-dependent methyltransferase 2, in cluster with Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
SAM-dependent methyltransferase (EC 2.1.1.-) in cluster with Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
Sarcosine N-methyltransferase
Sarcosine oxidase alpha subunit (EC 1.5.3.1)
Sarcosine oxidase beta subunit (EC 1.5.3.1)
Sarcosine oxidase delta subunit
Sarcosine oxidase delta subunit (EC 1.5.3.1)
Sarcosine oxidase, delta subunit (EC 1.5.3.1)
Sarcosine oxidase gamma subunit
Sarcosine oxidase gamma subunit (EC 1.5.3.1)
Sarcosine reductase component B alpha subunit (EC 1.21.4.3)
Sarcosine reductase component B beta subunit (EC 1.21.4.3)
SAV0291 homolog within ESAT-6 gene cluster
Scaffolding protein [Bacteriophage A118]
Sco1/SenC/PrrC protein family
secreted alkaline phosphatase
Secreted and spore coat-associated protein 1, similar to biofilm matrix component TasA and to camelysin
Secreted and spore coat-associated protein 2, similar to biofilm matrix component TasA and to camelysin
Secreted and spore coat-associated protein 3, similar to biofilm matrix component TasA and to camelysin
Secreted cyanophycinase (EC 3.4.15.6)
Secreted Endo-beta-N-acetylglucosaminidase (EndoS)
Secreted protein Ear, superantigen-encoding pathogenicity islands SaPI
Secreted protein Hcp
Secreted protein, suppressor for copper-sensitivity ScsC
Secreted von Willebrand factor-binding protein VWbp
Secretion protein, HlyD family
Secretory low molecular weight phospholipase A2 alpha
Secretory low molecular weight phospholipase A2 beta
Secretory low molecular weight phospholipase A2 delta
Secretory low molecular weight phospholipase A2 gamma
Sedoheptulose-1,7-bisphosphatase (EC 3.1.3.37)
Segregation and condensation protein A
Segregation and condensation protein B
Selenide,water dikinase (EC 2.7.9.3)
selenocysteine-containing
Selenocysteine-specific translation elongation factor
Selenophosphate-dependent tRNA 2-selenouridine synthase
Selenoprotein O and cysteine-containing homologs
Sensor histidine kinase colocalized with HrtAB transporter
Sensor histidine kinase CqsS
Sensor histidine kinase LiaS
Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-)
Sensor histidine kinase VanS (EC 2.7.3.-)
Sensor histidine kinase VncS
Sensor histidine protein kinase UhpB, glucose-6-phosphate specific (EC 2.7.13.3)
Sensor kinase CitA, DpiB (EC 2.7.3.-)
Sensor protein basS/pmrB (EC 2.7.3.-)
Sensor protein copS (EC 2.7.3.-)
Sensor protein of zinc sigma-54-dependent two-component system
Sensor protein PhoQ (EC 2.7.13.3)
Sensor protein torS (EC 2.7.3.-)
Sensory box/GGDEF family protein ScrC (involved in swarmer cell regulation)
Sensory box sensor histidine kinase/response regulator VieS
Sensory histidine kinase AtoS
Sensory histidine kinase BaeS
Sensory histidine kinase CreB
Sensory histidine kinase in two-component regulatory system with RstA
Sensory histidine kinase QseC
Sensory rhodopsin II
Sensory subunit of low CO2-induced protein complex, putative
Sepiapterin reductase (EC 1.1.1.153)
Septation ring formation regulator EzrA
Septum formation protein Maf
Septum site-determining protein MinC
Septum site-determining protein MinD
Serine acetyltransferase (EC 2.3.1.30)
Serine endopeptidase ScpC (EC 3.4.21.-)
Serine--glyoxylate aminotransferase (EC 2.6.1.45)
Serine hydroxymethyltransferase 1 (EC 2.1.2.1)
Serine hydroxymethyltransferase (EC 2.1.2.1)
Serine hydroxymethyltransferase (EC 2.1.2.1), not required for photorespiration, mitochondrial
Serine phosphatase RsbU, regulator of sigma subunit
Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
Serine protease (EC 3.4.21.-)
Serine protease precursor MucD/AlgY associated with sigma factor RpoE
Serine protein kinase (prkA protein), P-loop containing
Serine-protein kinase rsbW (EC 2.7.11.1)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Serine--pyruvate aminotransferase (EC 2.6.1.51)
Serine/threonine protein kinase (EC 2.7.11.1) PpkA
Serine/threonine-protein kinase ImpN involved in nitrogen fixation
Serine/threonine protein kinase PrkC, regulator of stationary phase
Serine/threonine protein kinase PrkC, regulator of stationary phase, short form
Serine transporter
Serpin A5, protease inhibitor I04.004
Ser/Thr and Tyr protein phosphatase (dual specificity)
Serum opacity factor
Seryl-tRNA synthetase (EC 6.1.1.11)
Seryl-tRNA synthetase (EC 6.1.1.11), archaeal
Seryl-tRNA synthetase (EC 6.1.1.11), mitochondrial
S-formylglutathione hydrolase (EC 3.1.2.12)
SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA
Shikimate 5-dehydrogenase (EC 1.1.1.25)
Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)
Shikimate kinase I (EC 2.7.1.71)
Shikimate kinase II (EC 2.7.1.71)
Shikimate kinase III (EC 2.7.1.71)
Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
Short-chain dehydrogenase/reductase in hypothetical Actinobacterial gene cluster
Short-chain dehydrogenase/reductase SDR
Short chain fatty acids transporter
Shufflon-specific DNA recombinase
S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)
Sialic acid biosynthesis protein NeuD, O-acetyltransferase
Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
Sialic acid-regulated TonB-dependent outer membrane receptor
Sialic acid transporter (permease) NanT
Sialic acid utilization regulator, RpiR family
Sialidase 1 precursor (EC 3.2.1.18)
Sialidase 2 (EC 3.2.1.18)
Sialidase 3 (EC 3.2.1.18)
Sialidase (EC 3.2.1.18)
Siderophore biosynthesis protein
Siderophore staphylobactin ABC transporter, permease protein SirB
Siderophore staphylobactin ABC transporter, permease protein SirC
Siderophore staphylobactin ABC transporter, substrate-binding protein SirA
Siderophore staphylobactin biosynthesis protein SbnA
Siderophore staphylobactin biosynthesis protein SbnB
Siderophore staphylobactin biosynthesis protein SbnC
Siderophore staphylobactin biosynthesis protein SbnD
Siderophore staphylobactin biosynthesis protein SbnE
Siderophore staphylobactin biosynthesis protein SbnF
Siderophore staphylobactin biosynthesis protein SbnG
Siderophore staphylobactin biosynthesis protein SbnH
Siderophore staphylobactin biosynthesis protein SbnI
Sigma-54 dependent transcriptional regulator
Sigma-54 dependent transcriptional regulator SypG
Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis
Sigma factor PvdS, controling pyoverdin biosynthesis
Sigma factor RpoE negative regulatory protein RseA
Sigma factor RpoE negative regulatory protein RseB precursor
Sigma factor RpoE regulatory protein RseC
Sigma-fimbriae chaperone protein
Sigma-fimbriae tip adhesin
Sigma-fimbriae uncharacterized paralogous subunit
Sigma-fimbriae uncharacterized subunit
Sigma-fimbriae usher protein
Signal peptidase I (EC 3.4.21.89)
Signal peptidase-like protein
Signal peptidase SipW (EC 3.4.21.89), required for TasA secretion
Signal recognition particle associated protein
Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)
Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
Signal transduction histidine kinase CheA (EC 2.7.3.-)
Signal transduction histidine kinase for Quinone-reactive Ni/Fe-hydrogenase
Signal transduction histidine kinase HoxJ (hydrogenase regulation)
Signal transduction histidine kinase SypF
Signal transduction protein CetA, mediates an energy taxis response
Signal transduction protein CetB, mediates an energy taxis response
Signal-transduction regulatory protein FlgR
Simiarl to coenzyme PQQ synthesis protein B
Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 1
Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 2
Similar to 5-oxoprolinase (EC 3.5.2.9) and Methylhydantoinases A, B (EC 3.5.2.14), contradiction in experimental data (see Annotation)
Similar to carbon monoxide dehydrogenase CooS subunit
Similar to coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
Similar to C-terminal domain of competence/damage-inducible protein CinA
Similar to C-terminal Zn-finger domain of DNA topoisomerase I
Similar to cytochrome c-type biogenesis protein CcsA/ResC
Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2)
Similar to gamma-glutamyl-putrescine oxidase
Similar to Glycine cleavage system H protein
Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis
Similar to hypothetical protein DUF454
Similar to N-terminal domain of competence/damage-inducible protein CinA, molybdopterin binding motif
Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase
Similar to proteins GerPF and GerPA
Similar to ribosomal large subunit pseudouridine synthase A
Similar to ribosomal large subunit pseudouridine synthase A, group 2
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type
Similar to ribosomal large subunit pseudouridine synthase D, CAC1266-type
Similar to ribosomal large subunit pseudouridine synthase D, TTE1780-type
Similar to secretin RcpA/CpaC, associated with Flp pilus assembly
Similar to TadZ/CpaE, associated with Flp pilus assembly
Similar to Teicoplanin resistance associated membrane protein TcaA
Similar to terminase small subunit, yqaS homolog
Single-stranded DNA-binding protein
Single-stranded DNA-binding protein (prophage associated)
Single-stranded-DNA-specific exonuclease recJ, Bacteriophage SPBc2-type
Single-stranded-DNA-specific exonuclease recJ, clostridial paralog
Single-stranded-DNA-specific exonuclease recJ, cyanobacterial paralog
Single-stranded-DNA-specific exonuclease recJ (EC 3.1.-.-)
Single-stranded exonuclease associated with Rad50/Mre11 complex
SinI protein, antagonist of SinR
SinR, regulator of post-exponential-phase responses genes (competence and sporulation)
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
Site-specific tyrosine recombinase
S-layer protein EA1
S-layer protein Sap
Slr, positive regulator of the extracellular matrix biosynthesis operon yqxM-sipW-tasA
Small acid-soluble spore protein, alpha/beta family, SASP_1
Small acid-soluble spore protein, alpha/beta family, SASP_2
Small acid-soluble spore protein, alpha/beta family, SASP_3
Small acid-soluble spore protein, alpha/beta family, SASP_4
Small acid-soluble spore protein, alpha/beta family, SASP_5
Small acid-soluble spore protein, alpha/beta family, SASP_6
Small acid-soluble spore protein, alpha-type SASP
Small acid-soluble spore protein, beta-type SASP
Small acid-soluble spore protein, gamma-type SASP
Small hypothetical protein Hyp1
Small protein similar to cysteinyl-tRNA synthetase
Small subunit naph/bph dioxygenase
SMT0608 replicon stabilization toxin
SMT0609 replicon stabilization protein (antitoxin to SMT0608)
SN-glycerol-3-phosphate transport ATP-binding protein ugpC (TC 3.A.1.1.3)
SN-glycerol-3-phosphate transport system permease protein ugpA (TC 3.A.1.1.3)
SN-glycerol-3-phosphate transport system permease protein ugpE (TC 3.A.1.1.3)
S-nitrosomycothiol reductase MscR
Sodium-Choline Symporter
Sodium-dependent phosphate transporter
Sodium/glutamate symport protein
Sodium/myo-inositol cotransporter
soluble [2Fe-2S] ferredoxin
Soluble cytochrome b562
soluble fumarate reductase, cytoplasmic
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)
Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)
Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
Sorbitol operon transcription regulator
Sortase
Sortase A, LPXTG specific
Sortase C, subfamily 3, QVPTGV specific
SOS-response repressor and protease LexA (EC 3.4.21.88)
SoxH protein, homolog
Spectinomycin 9-O-adenylyltransferase
Spermidine N1-acetyltransferase (EC 2.3.1.57)
Spermidine Putrescine ABC transporter permease component potB (TC_3.A.1.11.1)
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)
Spermidine Putrescine transport ATP-binding protein potA (TC_3.A.1.11.1)
Spermidine synthase (EC 2.5.1.16)
Spheroidene monooxygenase
SPI1-associated transcriptional regulator SprB
Spo0E-like putative sporulation regulatory protein in grePA-PF operon
Spore cortex biosynthesis protein
Spore cortex-lytic enzyme CwlJ
Spore cortex-lytic enzyme, lytic transglycosylase SleB
Spore cortex-lytic enzyme, N-acetylglucosaminidase SleL (EC 3.2.1.-)
Spore germination protein GerAA, germination response to L-alanine and related amino acids (earliest stage)
Spore germination protein GerAB, germination response to L-alanine and related amino acids (earliest stage)
Spore germination protein GerAC, germination response to L-alanine and related amino acids (earliest stage)
Spore germination protein GerBA, germination response to combination of glucose, fructose, L-asparagine, and K+ (earliest stage)
Spore germination protein GerBB, germination response to combination of glucose, fructose, L-asparagine, and K+ (earliest stage)
Spore germination protein GerBC, germination response to combination of glucose, fructose, L-asparagine, and K+ (earliest stage)
Spore germination protein GerD
Spore germination protein GerHA/GerIA
Spore germination protein GerHB/GerIB
Spore germination protein GerHC/GerIC
Spore germination protein GerKA
Spore germination protein GerKB
Spore germination protein GerKC
Spore germination protein GerLA
Spore germination protein GerLB
Spore germination protein GerLC
Spore germination protein GerN (inosine-dependent germination), Na+/H+ antiporter
Spore germination protein GerQA
Spore germination protein GerQB
Spore germination protein GerQC
Spore germination protein GerSA
Spore germination protein GerSB
Spore germination protein GerSC
Spore germination protein GerXA (on pXO1)
Spore germination protein GerXB (on pXO1)
Spore germination protein GerXC (on pXO1)
Spore germination protein GerYA
Spore germination protein GerYB
Spore germination protein GerYC
Spore germination protein YpeB
Spore photoproduct lyase (EC 4.1.99.-)
Spore protein YdhD, not involved in spore germination
Sporulation-associated protease N-terminal domain protein
Sporulation initiation inhibitor protein Soj
Sporulation initiation phosphotransferase B (Spo0B)
Sporulation initiation phosphotransferase (Spo0F)
Sporulation killing factor A SkfA
Sporulation sigma-E factor processing peptidase (SpoIIGA)
Squalene desaturase
Squalene--hopene cyclase (EC 5.4.99.17)
S-ribosylhomocysteine lyase (EC 4.4.1.21)
S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Ssb protein [SA bacteriophages 11, Mu50B]
SsnA protein
SSU ribosomal protein MRP10, mitochondrial
SSU ribosomal protein MRP13, mitochondrial
SSU ribosomal protein MRP1, mitochondrial
SSU ribosomal protein PET123, mitochondrial
SSU ribosomal protein RSM22, mitochondrial
SSU ribosomal protein RSM24, mitochondrial
SSU ribosomal protein RSM28, mitochondrial
SSU ribosomal protein S10e
SSU ribosomal protein S10p (S20e)
SSU ribosomal protein S10p (S20e), mitochondrial
SSU ribosomal protein S11e (S17p)
SSU ribosomal protein S11p (S14e)
SSU ribosomal protein S11p (S14e), mitochondrial
SSU ribosomal protein S12e
SSU ribosomal protein S12p (S23e)
SSU ribosomal protein S12p (S23e), mitochondrial
SSU ribosomal protein S13e (S15p)
SSU ribosomal protein S13p (S18e)
SSU ribosomal protein S13p (S18e), mitochondrial
SSU ribosomal protein S14e (S11p)
SSU ribosomal protein S14p (S29e)
SSU ribosomal protein S14p (S29e), mitochondrial
SSU ribosomal protein S15Ae (S8p)
SSU ribosomal protein S15e (S19p)
SSU ribosomal protein S15p (S13e)
SSU ribosomal protein S15p (S13e), mitochondrial
SSU ribosomal protein S16e (S9p)
SSU ribosomal protein S16p
SSU ribosomal protein S16p, mitochondrial
SSU ribosomal protein S17e
SSU ribosomal protein S17p (S11e)
SSU ribosomal protein S17p (S11e), mitochondrial
SSU ribosomal protein S18e (S13p)
SSU ribosomal protein S18p
SSU ribosomal protein S18p, mitochondrial
SSU ribosomal protein S19e
SSU ribosomal protein S19p (S15e)
SSU ribosomal protein S19p (S15e), mitochondrial
SSU ribosomal protein S1p
SSU ribosomal protein S20e (S10p)
SSU ribosomal protein S20p
SSU ribosomal protein S21e
SSU ribosomal protein S21p
SSU ribosomal protein S21p, mitochondrial
SSU ribosomal protein S22mt, mitochondrial
SSU ribosomal protein S23e (S12p)
SSU ribosomal protein S23mt, mitochondrial
SSU ribosomal protein S24e
SSU ribosomal protein S24mt, mitochondrial
SSU ribosomal protein S25e
SSU ribosomal protein S25mt, mitochondrial
SSU ribosomal protein S26e
SSU ribosomal protein S26mt, mitochondrial
SSU ribosomal protein S27Ae
SSU ribosomal protein S27e
SSU ribosomal protein S27mt, mitochondrial
SSU ribosomal protein S28e
SSU ribosomal protein S28mt, mitochondrial
SSU ribosomal protein S29e (S14p)
SSU ribosomal protein S29mt, mitochondrial
SSU ribosomal protein S2e (S5p)
SSU ribosomal protein S2p (SAe)
SSU ribosomal protein S2p (SAe), mitochondrial
SSU ribosomal protein S30e
SSU ribosomal protein S30mt, mitochondrial
SSU ribosomal protein S31mt, mitochondrial
SSU ribosomal protein S33mt, mitochondrial
SSU ribosomal protein S34mt, mitochondrial
SSU ribosomal protein S35mt, mitochondrial
SSU ribosomal protein S3Ae
SSU ribosomal protein S3e (S3p)
SSU ribosomal protein S3p (S3e)
SSU ribosomal protein S3p (S3e), mitochondrial
SSU ribosomal protein S4e
SSU ribosomal protein S4p (S9e)
SSU ribosomal protein S4p (S9e), mitochondrial
SSU ribosomal protein S5e (S7p)
SSU ribosomal protein S5p (S2e)
SSU ribosomal protein S5p (S2e), mitochondrial
SSU ribosomal protein S6e
SSU ribosomal protein S6p
SSU ribosomal protein S6p, mitochondrial
SSU ribosomal protein S7e
SSU ribosomal protein S7p (S5e)
SSU ribosomal protein S7p (S5e), mitochondrial
SSU ribosomal protein S8e
SSU ribosomal protein S8p (S15Ae)
SSU ribosomal protein S8p (S15Ae), mitochondrial
SSU ribosomal protein S9e (S4p)
SSU ribosomal protein S9p (S16e)
SSU ribosomal protein S9p (S16e), mitochondrial
SSU ribosomal protein SAe (S2p)
SSU ribosomal protein Thx
SSU ribosomal protein VAR1, mitochondrial
SSU rRNA
Stage 0 sporulation protein J
Stage 0 sporulation two-component response regulator (Spo0A)
Stage III sporulation protein AA
Stage III sporulation protein AB
Stage III sporulation protein AC
Stage III sporulation protein AD
Stage III sporulation protein AE
Stage III sporulation protein AF
Stage III sporulation protein AG
Stage III sporulation protein AH
Stage III sporulation protein D
Stage II sporulation protein B
Stage II sporulation protein D
Stage II sporulation protein D (SpoIID)
Stage II sporulation protein M (SpoIIM)
Stage II sporulation protein P
Stage II sporulation protein related to metaloproteases (SpoIIQ)
Stage II sporulation protein required for processing of pro-sigma-E (SpoIIR)
Stage II sporulation serine phosphatase for sigma-F activation (SpoIIE)
Stage IV sporulation pro-sigma-K processing enzyme (SpoIVFB)
Stage IV sporulation protein A
Stage IV sporulation protein B
Stage IV sporulation protein FA (SpoIVFA)
Stage VI sporulation protein D
Stage V sporulation protein AA (SpoVAA)
Stage V sporulation protein AB (SpoVAB)
Stage V sporulation protein AC (SpoVAC)
Stage V sporulation protein AD (SpoVAD)
Stage V sporulation protein AE (SpoVAE)
Stage V sporulation protein AF (SpoVAF)
Stage V sporulation protein B
Stage V sporulation protein D (Sporulation-specific penicillin-binding protein)
Stage V sporulation protein E
Stage V sporulation protein involved in spore cortex synthesis (SpoVR)
Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
Stage V sporulation protein required for normal spore cortex and coat synthesis (SpoVM)
Stage V sporulation protein T, AbrB family transcriptional regulator (SpoVT)
Stage V sporulation protein whose disruption leads to the production of immature spores (SpoVK)
Staphylocoagulase
Staphylococcal accessory regulator A (SarA)
Staphylococcal enterotoxin B
Staphylococcal enterotoxin C3
Staphylococcal enterotoxin L
Staphylococcal enterotoxin Q
Starvation lipoprotein Slp
Starvation lipoprotein Slp paralog
Starvation sensing protein RspA
Starvation sensing protein RspB
Stationary-phase-induced ribosome-associated protein
Stationary phase secreted protein TasA, major protein component of biofilm matrix
StbD replicon stabilization protein (antitoxin to StbE)
StbE replicon stabilization toxin
Steryl-sulfatase precursor (EC 3.1.6.2)
Strepotococcal cysteine protease (Streptopain) (EC 3.4.22.10)
Streptococcal cell surface hemoprotein receptor Shr
Streptococcal extracellular nuclease 2
Streptococcal extracellular nuclease 3
Streptococcal extracellular nuclease 4
Streptococcal inhibitor of complement (SIC)
Streptococcal lipoprotein rotamase A; Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)
Streptococcal mitogenic exotoxin Z (SmeZ)
Streptococcal pyrogenic exotoxin A (SpeA)
Streptococcal pyrogenic exotoxin B (SpeB)
Streptococcal pyrogenic exotoxin C (SpeC)
Streptococcal pyrogenic exotoxin G (SpeG)
Streptococcal pyrogenic exotoxin G (SpeG) fragment
Streptococcal pyrogenic exotoxin H (SpeH)
Streptococcal pyrogenic exotoxin I (SpeI)
Streptococcal pyrogenic exotoxin J (SpeJ)
Streptococcal pyrogenic exotoxin J (SpeJ) fragment
Streptococcal pyrogenic exotoxin K (SpeK)
Streptococcal pyrogenic exotoxin L (SpeL)
Streptococcal pyrogenic exotoxin M (SpeM)
Streptococcal superantigen A (SSA)
Streptodornase B
Streptodornase D
Streptokinase
Streptolysin O
Streptolysin S biosynthesis protein B (SagB)
Streptolysin S biosynthesis protein C (SagC)
Streptolysin S biosynthesis protein D (SagD)
Streptolysin S biosynthesis protein (SagF)
Streptolysin S export transmembrane permease (SagH)
Streptolysin S export transmembrane permease (SagI)
Streptolysin S precursor (SagA)
Streptolysin S self-immunity protein (SagE)
Streptomycin 3''-O-adenylyltransferase (EC 2.7.7.47)
Streptopain inhibitor
Streptothricin acetyltransferase, Streptomyces lavendulae type
Stringent starvation protein A
Stringent starvation protein B
STRUCTURAL ELEMENTS; Cell Exterior; surface polysaccharides/antigens
Structure-specific tRNA-binding protein trbp111
Sua5 YciO YrdC YwlC family protein
Substrate-specific component BioY of biotin ECF transporter
Substrate-specific component BL0695 of predicted ECF transporter
Substrate-specific component CbiM of cobalt ECF transporter
Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole
Substrate-specific component FolT of folate ECF transporter
Substrate-specific component glr2052 of predicted ECF transporter
Substrate-specific component HmpT of predicted thiamin-related ECF transporter
Substrate-specific component MTH452 of predicted ECF transporter
Substrate-specific component MtsA of methionine-regulated ECF transporter
Substrate-specific component NiaX of predicted niacin ECF transporter
Substrate-specific component NikM of nickel ECF transporter
Substrate-specific component PAM0308 of predicted lipoate ECF transporter
Substrate-specific component PanT of predicted pantothenate ECF transporter
Substrate-specific component PdxT of predicted pyridoxine ECF transporter
Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
Substrate-specific component RibU of riboflavin ECF transporter
Substrate-specific component SCO2325 of predicted cobalamin ECF transporter
Substrate-specific component ST1137 of predicted ECF transporter
Substrate-specific component STY3230 of queuosine-regulated ECF transporter
Substrate-specific component ThiT of thiamin ECF transporter
Substrate-specific component ThiW of predicted thiazole ECF transporter
Substrate-specific component TrpP of tryptophan ECF transporter
Substrate-specific component TTE1586 of predicted methylthioadenosine ECF transporter
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Subtilase family domain protein
Succinate dehydrogenase cytochrome b-556 subunit
Succinate dehydrogenase cytochrome b558 subunit
Succinate dehydrogenase cytochrome b560 subunit
Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor
Succinate dehydrogenase cytochrome b subunit
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Succinate dehydrogenase hydrophobic membrane anchor protein
Succinate dehydrogenase hydrophobic membrane anchor protein(Nostoc p.)
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Succinylarginine dihydrolase (EC 3.5.3.23)
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Succinyl-CoA ligase [GDP-forming] alpha chain (EC 6.2.1.4)
Succinyl-CoA ligase [GDP-forming] beta chain (EC 6.2.1.4)
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsE (EC 2.8.3.15)
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF (EC 2.8.3.15)
Succinyl-CoA synthetase, alpha subunit-related enzymes
Succinylglutamate desuccinylase (EC 3.5.1.96)
Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Succinylornithine transaminase (EC 2.6.1.81)
Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Sucrose operon repressor ScrR, LacI family
Sucrose permease, major facilitator superfamily
Sucrose phosphorylase (EC 2.4.1.7)
Sucrose repressor, LacI family, Shewanella subfamily
Sucrose specific transcriptional regulator CscR, LacI family
Sugar-1-epimerase YihR
Sugar diacid utilization regulator SdaR
Sugar kinase YihV
Sugar/maltose fermentation stimulation protein homolog
Sugar phosphate isomerases/epimerases family protein YcjR
Sugar transferase SypR involved in lipopolysaccharide synthesis
Sulfatase
Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1)
Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Sulfate and thiosulfate binding protein CysP
Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)
Sulfate-binding protein Sbp
Sulfate ester binding protein
Sulfate permease
Sulfate permease, Pit-type
Sulfate permease, Trk-type
Sulfate transporter, CysZ-type
Sulfate transport system permease protein CysT
Sulfate transport system permease protein CysW
Sulfhydrogenase II subunit a
Sulfhydrogenase II subunit b
Sulfhydrogenase II subunit d
Sulfhydrogenase II subunit g
Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor (EC 1.8.2.-)
Sulfite dehydrogenase cytochrome subunit SoxD
Sulfite reductase alpha subunit (EC 1.8.99.1)
Sulfite reductase beta subunit (EC 1.8.99.1)
Sulfite reductase, dissimilatory-type gamma subunit (EC 1.8.99.3)
Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2)
Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)
Sulfite reduction-associated complex DsrMKJOP iron-sulfur protein DsrO (=HmeA)
Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (=HmeF)
Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD)
Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC)
Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB)
sulfonate monooxygenase
Sulfur acceptor protein CsdE for iron-sulfur cluster assembly
Sulfur acceptor protein SufE for iron-sulfur cluster assembly
Sulfur carrier protein adenylyltransferase ThiF
Sulfur carrier protein ThiS
Sulfur oxidation molybdopterin C protein
sulfur oxidation protein SoxA
Sulfur oxidation protein SoxB
Sulfur oxidation protein SoxX
Sulfur oxidation protein SoxY
Sulfur oxidation protein SoxZ
Superantigen enterotoxin SEB
Superantigen enterotoxin SEK
Superantigen enterotoxin SEL
Superfamily II DNA/RNA helicases, SNF2 family
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)
Superoxide dismutase (EC 1.15.1.1)
Superoxide dismutase [Fe] (EC 1.15.1.1)
superoxide dismutase [Fe-Zn] (EC 1.15.1.1)
Superoxide dismutase [Mn] (EC 1.15.1.1)
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)
Superoxide reductase (EC 1.15.1.2)
Suppression of copper sensitivity: putative copper binding protein ScsA
Suppressor of Glycerol Defect
Surface exclusion protein Sea1/PrgA
Surface-exposed lipoprotein JlpA
Surface presentation of antigens protein
Surface presentation of antigens protein SpaK
Surface presentation of antigens protein SpaK (Invasion protein InvB)
Surface presentation of antigens protein SpaM
Surface presentation of antigens protein SpaN
Surface presentation of antigens protein SpaN (Invasion protein InvJ)
Surface presentation of antigens protein SpaO
Surface presentation of antigens protein SpaP
Surface presentation of antigens protein SpaQ
Surface presentation of antigens protein SpaR
Surface presentation of antigens protein SpaS
Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)
SusC, outer membrane protein involved in starch binding
SusD, outer membrane protein
Swarming motility protein SwrC
Syndecan-1 precursor
Tagatose-1,6-bisphosphate aldolase AgaY (EC 4.1.2.-)
Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
Tagatose-1-phosphate kinase TagK
Tagatose-6-phosphate kinase AgaZ (EC 2.7.1.144)
Tagatose-6-phosphate kinase (EC 2.7.1.144)
Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56)
Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144)
Tail fiber protein [SA bacteriophages 11, Mu50B]
Tail-specific protease precursor (EC 3.4.21.102)
Tail tape-measure protein [Bacteriophage A118]
Tape measure protein [SA bacteriophages 11, Mu50B]
Tartrate decarboxylase (EC 4.1.1.73)
TATA-box binding protein
Taurine-binding periplasmic protein tauA
Taurine transport ATP-binding protein tauB
Taurine transporter substrate-binding protein
Taurine transport system permease protein tauC
TCP pilin signal peptidase, TcpA processing
TCP pilus virulence regulatory protein ToxT, transcription activator
TcuA: flavoprotein used to oxidize tricarballylate to cis-aconitate
TcuB: works with TcuA to oxidize tricarballylate to cis-aconitate
TcuC: integral membrane protein used to transport tricarballylate across the cell membrane
TcuR: regulates tcuABC genes used in utilization of tricarballylate
T-DNA border endonuclease, VirD1
T-DNA border endonuclease VirD2, RP4 TraG-like relaxase
Teichoic acid biosynthesis protein
Teichoic acid biosynthesis protein X
Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)
Teichoic acid glycosylation protein
Teichoic acid translocation permease protein TagG
Teichuronic acid biosynthesis protein TuaB
Teichuronic acid biosynthesis protein TuaE, putative secreted polysaccharide polymerase
Teichuronic acid biosynthesis protein TuaF
Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR
Teicoplanin resistance associated membrane protein TcaA
Teicoplanin resistance associated membrane protein TcaB
Tellurite resistance protein TehA
Tellurite resistance protein TehB
Tellurite resistance protein TrgA
Tellurite resistance protein TrgB / ADP-ribose pyrophosphatase (EC 3.6.1.13)
Terminal dioxygenase component of carbazole 1,9a-dioxygenase
Terminal oxidase, small hydrophobic subunit (DoxE)
Terminal oxidase, subunit (DoxC)
Terminase large subunit [Bacteriophage A118]
Terminase, large subunit [Bacteriophage PhiNIH1.1]
Terminase small subunit [Bacteriophage A118]
terpene synthase/cyclase family protein / go_process: terpenoid biosynthesis [goid 0016114]
Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)
Tetrachloroethene reductive dehalogenase PceA (EC 1.97.1.8)
Tetrachloroethene reductive dehalogenase PceA membrane-bound subunit
Tetrachloroethene reductive dehalogenase TceA
Tetrachloroethene reductive dehalogenase TceA membrane-bound subunit
Tetracycline resistance protein TetM
Tetracycline resistance protein TetO
Tetracycline resistance protein TetP
Tetracycline resistance protein TetQ
Tetracycline resistance protein TetW
Tetrapyrrole (Corrin-Porphyrin) methylase family protein UPF0011
Tetrathionate reductase sensory transduction histidine kinase (EC 2.7.3.-)
Tetrathionate reductase subunit A (1.8.99.-)
Tetrathionate reductase subunit B (1.8.99.-)
Tetrathionate reductase subunit C (1.8.99.-)
Tetrathionate reductase two-component response regulator
Tetratrico-peptide repeat (TPR) protein within ESAT-6 gene cluster
TetR family regulatory protein
TetR family regulatory protein of MDR cluster
Thermosome subunit
Thiamin ABC transporter, ATPase component
Thiamin ABC transporter, substrate-binding component
Thiamin ABC transporter, transmembrane component
Thiaminase II (EC 3.5.99.2)
Thiamin biosynthesis protein ThiC
Thiamine biosynthesis protein thiI
Thiamine biosynthesis protein thiI-like
Thiamine kinase (EC 2.7.1.89)
Thiamine-monophosphate kinase (EC 2.7.4.16)
thiamine pyrophosphate enzyme domain protein TPP-binding
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Thiamin-phosphate pyrophosphorylase-like protein
Thiamin-phosphate synthase ThiN (EC 2.5.1.3)
Thiamin pyrophosphokinase (EC 2.7.6.2)
Thiamin-regulated outer membrane receptor Omr1
Thiamin transport gene THI10
Thiazole biosynthesis protein ThiG
Thiazole biosynthesis protein ThiH
Thiazole biosynthetic enzyme Thi4
ThiJ/PfpI family protein
Thioesterase PvdG involved in non-ribosomal peptide biosynthesis
Thioester dehydrase family protein in surfactin biosynthesis cluster
Thiol-activated cytolysin
Thiol:disulfide interchange protein DsbC
Thiol:disulfide interchange protein DsbG precursor
Thiol:disulfide interchange protein, thioredoxin family
Thiol:disulfide oxidoreductase associated with MetSO reductase
Thiol:disulfide oxidoreductase related to ResA
Thiol:disulfide oxidoreductase TlpA
Thiol peroxidase, Bcp-type (EC 1.11.1.15)
Thiol peroxidase, Tpx-type (EC 1.11.1.15)
Thioredoxin
Thioredoxin CDS_ID OB2235
Thioredoxin-like protein clustered with PA0057
Thioredoxin peroxidase 1 (EC 1.6.4.-)
Thioredoxin reductase (EC 1.8.1.9)
Thioredoxin reductase (EC 1.8.1.9), metazoan type
thioredoxin SoxW
Thiosulfate reductase cytochrome B subunit
Thiosulfate reductase electron transport protein phsB
Thiosulfate reductase precursor (EC 1.-.-.-)
Thiosulfate sulfurtransferase glpE (EC 2.8.1.1)
Threonine catabolic operon transcriptional activator TdcA
Threonine catabolic operon transcriptional activator TdcR
Threonine dehydratase biosynthetic (EC 4.3.1.19)
Threonine dehydratase, catabolic (EC 4.3.1.19)
Threonine dehydratase (EC 4.3.1.19)
threonine dehydrogenase
Threonine dehydrogenase and related Zn-dependent dehydrogenases
Threonine kinase in B12 biosynthesis
Threonine synthase (EC 4.2.3.1)
Threonyl-tRNA synthetase (EC 6.1.1.3)
Threonyl-tRNA synthetase (EC 6.1.1.3), mitochondrial
Thrombin, protease S01.217
Thrombomodulin
Thymidine kinase (EC 2.7.1.21)
Thymidine phosphorylase (EC 2.4.2.4)
Thymidylate kinase (EC 2.7.4.9)
Thymidylate synthase (EC 2.1.1.45)
Thymidylate synthase thyX (EC 2.1.1.-)
TilS and TtcA-like
TilS-like 3
TilS-like type 2
Tissue factor
Tissue factor pathway inhibitor-1, protease inhibitor I02.012
TldD-domain protein
TldD family protein, Actinobacterial subgroup
TldD family protein, Beta/Gamma-proteobacterial subgroup
TldD protein, part of proposed TldE/TldD proteolytic complex (PMID 12029038)
TldE/PmbA family protein, Actinobacterial subgroup
TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup
TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex (PMID 12029038)
Tlr0729 protein
tmRNA-binding protein SmpB
Tn552 transposase
TniA putative transposase
TniB NTP-binding protein
TniQ
Tocopherol cyclase (EC 5.-.-.-)
TolA protein
Tol biopolymer transport system, TolR protein
tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins
Toluate 1,2-dioxygenase alpha subunit
Toluate 1,2-dioxygenase beta subunit
Toluate 1,2-dioxygenase electron transfer component
toluene-3-monooxygenase ferredoxin protein
toluene-3-monooxygenase oxidoreductase
toluenesulfonate zinc-independent alcohol dehydrogenase
TonB-dependent heme and hemoglobin receptor HutA
TonB-dependent heme receptor HutR
TonB-dependent hemin , ferrichrome receptor
TonB-dependent receptor
TonB-dependent receptor possibly related to N-acetylgalactosamine utilization
TonB-dependent siderophore receptor
TonB system biopolymer transport component
Topoisomerase IV subunit A (EC 5.99.1.-)
Topoisomerase IV subunit B (EC 5.99.1.-)
Toxic shock syndrome toxin 1 (TSST-1)
_Toximoron (Other)
_Toximoron (Superantigen)
Toxin co-regulated pilin A
Toxin co-regulated pilus biosynthesis protein B
Toxin co-regulated pilus biosynthesis protein C, outer membrane protein
Toxin co-regulated pilus biosynthesis protein D
Toxin co-regulated pilus biosynthesis protein E, anchors TcpT to membrane
Toxin co-regulated pilus biosynthesis protein F, putative outer membrane channel for TcpA extrusion
Toxin co-regulated pilus biosynthesis protein H, transcriptional activator of ToxT promoter
Toxin co-regulated pilus biosynthesis protein I, chemoreceptor, negative regulator of TcpA
Toxin co-regulated pilus biosynthesis protein P, transcriptional activator of ToxT promoter
Toxin co-regulated pilus biosynthesis protein Q
Toxin co-regulated pilus biosynthesis protein R
Toxin co-regulated pilus biosynthesis protein S
Toxin co-regulated pilus biosynthesis protein T, putative ATP-binding translocase of TcpA
TPR domain protein in aerotolerance operon
TPR domain protein, putative component of TonB system
TPR repeat containing exported protein
TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase
Trans-2,cis-3-Decenoyl-ACP isomerase
trans-acting positive regulator (Atx A)
Transaldolase (EC 2.2.1.2)
trans-cinnamate 4-monooxygenase
Transcription accessory protein (S1 RNA-binding domain)
transcriptional activator AtxA, (pXO1-119)
Transcriptional activator GadE
Transcriptional activator GpuR
Transcriptional activator MetR
Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family
Transcriptional activator of acetoin dehydrogenase operon AcoR
Transcriptional activator of cad operon
Transcriptional activator of maltose regulon, MalT
Transcriptional activator PlcR
Transcriptional activator protein CopR
Transcriptional activator protein luxR
Transcriptional activator protein LysR
Transcriptional activator RfaH
Transcriptional activator ToxR
Transcriptional activatory protein CaiF
Transcriptional antiterminator of lichenan operon, BglG family
Transcriptional antiterminator with PTS regulation domain, SPy0181 ortholog
Transcriptional (co)regulator CytR
Transcriptional factor in putative operon for degradation of branched-chain alkanes, nitroalkanes and may be also cyclic ketones, alkenoic acids
Transcriptional regulator AglR, LacI family
Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family
Transcriptional regulator, ArsR family
Transcriptional regulator BkdR of isoleucine and valine catabolism operon
Transcriptional regulator CdgA
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator, Cro/CI family
transcriptional regulator, Crp/Fnr family
Transcriptional regulator, Crp/Fnr family
Transcriptional regulator CsgD for 2nd curli operon
Transcriptional regulator for fatty acid degradation FadR, GntR family
Transcriptional regulator for ferulate or vanillate catabolism
Transcriptional regulator FrcR for fructose utilization, ROK family
transcriptional regulator, Fur family
Transcriptional regulator, FUR family
Transcriptional regulator GbuR
Transcriptional regulator, GntR family, in hypothetical Actinobacterial gene cluster
transcriptional regulator, GntR family, threonine metabolism
Transcriptional regulator, Hth-3 family
Transcriptional regulator HxlR, formaldehyde assimilation
Transcriptional regulator, IclR family
Transcriptional regulator in cluster with beta-lactamase, GntR family
Transcriptional regulator in cluster with unspecified monosaccharide ABC transport system
Transcriptional regulator in cluster with Zn-dependent hydrolase
Transcriptional regulator in custer with plant-induced nitrilase
Transcriptional regulator KdgR, KDG operon repressor
Transcriptional regulator LasR
Transcriptional regulator, luxR family, associated with agmatine catabolism
Transcriptional regulator LuxZ
Transcriptional regulator, LysR family, in formaldehyde detoxification operon
Transcriptional regulator, LysR family, in glycolate utilization operon
Transcriptional regulator, MerR family
Transcriptional regulator, MerR family, near polyamine transporter
Transcriptional regulator NanR
Transcriptional regulator near Vibriobactin biosynthetic gene custer
Transcriptional regulator NfxB
Transcriptional regulator of alpha-acetolactate operon AlsR
Transcriptional regulator of b-glucosides utilization, LacI family
Transcriptional regulator of biofilm formation (AraC/XylS family)
Transcriptional regulator of catabolic arginine decarboxylase (adiA)
Transcriptional regulator of chitobiose utilization cluster, AraC family
Transcriptional regulator of D-allose utilization, LacI family
Transcriptional regulator of D-allose utilization, RpiR family
Transcriptional regulator of fatty acid biosynthesis FabT
Transcriptional regulator of fimbriae expression FimY
Transcriptional regulator of fimbriae expression FimZ (LuxR/UhpA family)
Transcriptional regulator of fructoselysine utilization operon FrlR
Transcriptional regulator of fucose utilization, GntR family
Transcriptional regulator of maltose utilization, LacI family
Transcriptional regulator of mannitol utilization, DeoR family protein
Transcriptional regulator of mannoside utilization, LacI family
Transcriptional regulator of mannoside utilization, variant 2, LacI family
Transcriptional regulator of rhamnose utilization, AraC family
Transcriptional regulator of rhamnose utilization, DeoR family
Transcriptional regulator of rhamnose utilization, GntR family
Transcriptional regulator of rhamnose utilization, LacI family
Transcriptional regulator of succinyl CoA synthetase operon
Transcriptional regulator of the arabinose operon in Shewanella, GntR family
Transcriptional regulator of trehalose utilization, LacI family
Transcriptional regulator PchR
Transcriptional regulator PhnF
Transcriptional regulator, PpsR
Transcriptional regulator RhlR
Transcriptional regulator, RofA
Transcriptional regulator RutR of pyrimidine catabolism (TetR family)
transcriptional regulator SoxR
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family, associated with agmatine catabolism
Transcriptional regulator, VCA0231 ortholog
Transcriptional regulator VpsR
Transcriptional regulator VpsT
Transcriptional regulator YbiH, TetR family
Transcriptional regulator YcjW, LacI family, possibly involved in maltodextrin utilization pathway
Transcriptional regulatory protein
Transcriptional regulatory protein basR/pmrA
Transcriptional regulatory protein CitB, DpiA
Transcriptional regulatory protein PhoP
Transcriptional regulatory protein RstA
Transcriptional regulatory protein RtcR
Transcriptional regulatory protein TctD
Transcriptional regulatory protein UhpA
Transcriptional regulator, YtfJ-family
Transcriptional repressor of aerobactin receptor iutR
Transcriptional repressor of aga operon
Transcriptional repressor of CmeABC operon, CmeR
Transcriptional repressor of PutA and PutP
Transcriptional repressor of the arabinose operon
Transcriptional repressor of the fructose operon, DeoR family
Transcriptional repressor of the lac operon
Transcriptional repressor of the myo-inositol catabolic operon DeoR family
Transcriptional repressor protein TyrR
Transcriptional repressor UidR
Transcription antitermination protein NusG
Transcription antitermination protein UpdY
Transcription elongation factor GreA
Transcription elongation factor GreB
Transcription initiation factor B
Transcription initiation factor B-related protein
Transcription initiation factor IIA large subunit
Transcription initiation factor IIB
Transcription initiation factor IIE beta subunit
Transcription initiation factor IIF alpha subunit
Transcription initiation factor IIF beta subunit
Transcription initiation factor IIH p34 subunit
Transcription initiation factor IIH p44 subunit
Transcription initiation factor IIH p80 subunit
Transcription initiation factor IIH p90 subunit
Transcription regulator CDS_ID OB0894
Transcription regulator [contains diacylglycerol kinase catalytic domain]
Transcription regulator in CO-DH cluster
Transcription regulator of multidrug efflux pump operon, TetR (AcrR) family
Transcription-repair coupling factor
Transcription-repair coupling factor, amino-terminal 1/3
Transcription-repair coupling factor, carboxy-terminal 2/3
Transcription-repair coupling factor fragment
Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family
Transcription repressor of tripartite multidrug resistance system
Transcription termination factor Rho
Transcription termination protein NusA
Transcription termination protein NusB
transferase, hexapeptide repeat family
Transition state regulatory protein AbrB
Transketolase, C-terminal section (EC 2.2.1.1)
Transketolase (EC 2.2.1.1)
Transketolase, N-terminal section (EC 2.2.1.1)
Translational activator for COX1 mRNA, cytochrome oxidase biogenesis protein Pet309
Translational activator for COX2 mRNA, cytochrome oxidase biogenesis protein Pet111
Translational activator for COX3 mRNA, cytochrome oxidase biogenesis protein Pet122
Translational activator for COX3 mRNA, cytochrome oxidase biogenesis protein Pet494
Translational activator for COX3 mRNA, cytochrome oxidase biogenesis protein Pet54
Translation elongation factor 1 alpha-related protein
Translation elongation factor 1 alpha subunit
Translation elongation factor 1 beta subunit
Translation elongation factor 1 delta subunit
Translation elongation factor 1 gamma subunit
Translation elongation factor 2
Translation elongation factor 3
Translation elongation factor G
Translation elongation factor G, chloroplast
Translation elongation factor G, mitochondrial
Translation elongation factor G paralog
Translation elongation factor G-related protein
Translation elongation factor G Stremptomyces paralog
Translation elongation factor LepA
Translation elongation factor P
Translation elongation factor P-related protein
Translation elongation factor Ts
Translation elongation factor Tu
Translation initiation factor 1
Translation initiation factor 1A
Translation initiation factor 2
Translation initiation factor 2B alpha/beta/delta-type subunit
Translation initiation factor 2B alpha subunit
Translation initiation factor 2B beta subunit
Translation initiation factor 2B delta subunit
Translation initiation factor 2B epsilon subunit
Translation initiation factor 2B gamma subunit
Translation initiation factor 3
Translation initiation factor SUI1
Translation initiation factor SUI1-related protein
Transmembrane component BioN of energizing module of biotin ECF transporter
Transmembrane component BL0694 of energizing module of predicted ECF transporter
Transmembrane component CbiQ of energizing module of cobalt ECF transporter
Transmembrane component glr2053 of energizing module of predicted ECF transporter
Transmembrane component MTH453 of energizing module of predicted ECF transporter
Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
Transmembrane component NikQ of energizing module of nickel ECF transporter
Transmembrane component of energizing module of ECF transporters in Cyanobacteria
Transmembrane component of energizing module of ECF transporters in Mycobacteria
Transmembrane component of energizing module of predicted pantothenate ECF transporter
Transmembrane component of energizing module of predicted tryptophan ECF transporter
Transmembrane component of energizing module of riboflavin ECF transporter
Transmembrane component of general energizing module of ECF transporters
Transmembrane component SCO2323 of energizing module of predicted cobalamin ECF transporter
Transmembrane component SS1135 of energizing module of predicted ECF transporter
Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter
Transmembrane component TTE1588 of energizing module of predicted methylthioadenosine ECF transporter
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
transmembrane protein, distant homology with ydbS
transmembrane protein, distant homology with ydbT
Transmembrane regulator protein PrtR
Transmembrane regulatory protein ToxS
Transport ATP-binding protein CydC
Transport ATP-binding protein CydCD
Transport ATP-binding protein CydD
Transporter LiaF
Transporter yvqF
Transport of small molecules: Cations
Transposase for insertion sequence element IS1557
Transposase for insertion sequence-like element IS431mec
Transposase (maltose area)
Transposase OrfAB, subunit B
Transthyretin family protein
TRAP dicarboxylate transporter, DctM subunit, unknown substrate 8
TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1
TRAP transporter solute receptor, TAXI family precursor
TRAP transporter solute receptor, unknown substrate 1
TRAP-type C4-dicarboxylate transport system, large permease component
TRAP-type C4-dicarboxylate transport system, periplasmic component
TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
TRAP-type uncharacterized transport system, fused permease component
Treacle protein
Trehalase (EC 3.2.1.28)
Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
Trehalose-6-phosphate phosphatase (EC 3.1.3.12)
Trehalose 6-phosphate phosphorylase (EC 2.4.1.216)
Trehalose operon transcriptional repressor
Trehalose phosphorylase (EC 2.4.1.64)
Trehalose-regulated TonB-dependent outer membrane receptor
Trehalose synthase (EC 5.4.99.16)
Triacylglycerol lipase (EC 3.1.1.3)
Triacylglycerol lipase precursor (EC 3.1.1.3)
Tricarboxylate transport membrane protein TctA
Tricarboxylate transport membrane protein TctB
tricarboxylate transport protein TctB, putative
Trilactone hydrolase IroD
Trimethylamine:corrinoid methyltransferase
Trimethylamine methyltransferase corrinoid protein
Trimethylamine-N-oxide reductase (Cytochrome c) (EC 1.7.2.3)
Trimethylamine-N-oxide reductase (EC 1.6.6.9)
Trimethylamine permease
Triosephosphate isomerase (EC 5.3.1.1)
Triphosphoribosyl-dephospho-CoA synthetase
Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
TrkA-N:Sodium/hydrogen exchanger
Trk system potassium uptake protein trkA
Trk system potassium uptake protein TrkG
TrmH family tRNA/rRNA methyltransferase YacO (EC 2.1.1.-)
tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)
tRNA 5-methylaminomethyl-2-thiouridine synthase TusA
tRNA 5-methylaminomethyl-2-thiouridine synthase TusB
tRNA 5-methylaminomethyl-2-thiouridine synthase TusC
tRNA 5-methylaminomethyl-2-thiouridine synthase TusD
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
tRNA (adenine57/58-N1)-methyltransferase (EC 2.1.1.36)
tRNA-Ala
tRNA-Ala-CGC
tRNA-Ala-GGC
tRNA-Ala-UGC
tRNA and rRNA cytosine-C5-methylase Type 1
tRNA-Arg
tRNA-Arg-ACG
tRNA-Arg-CCG
tRNA-Arg-CCU
tRNA-Arg-GCG
tRNA-Arg-UCG
tRNA-Arg-UCU
tRNA-Asn
tRNA-Asn-GUU
tRNA-Asp
tRNA-Asp-GUC
tRNA binding domain protein
tRNA:Cm32/Um32 methyltransferase
tRNA-Cys
tRNA-Cys-GCA
tRNA(Cytosine32)-2-thiocytidine synthetase
tRNA cytosine methylase Pos56
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8)
tRNA dihydrouridine synthase B (EC 1.-.-.-)
tRNA dihydrouridine synthase B like
tRNA-dihydrouridine synthase C (EC 1.-.-.-)
tRNA-(G10-N2) methyltransferase; tRNA-(G10-N2) dimethyltransferase
tRNA-Gln
tRNA-Gln-CUG
tRNA-Gln-UUG
tRNA-Glu
tRNA-Glu-CUC
tRNA-Glu-UUC
tRNA-Gly
tRNA-Gly-CCC
tRNA-Gly-GCC
tRNA-Gly-UCC
tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)
tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)
tRNA-guanine transglycosylase (EC 2.4.2.29)
tRNA-His
tRNAHis-5'-guanylyltransferase
tRNA-His-GUG
tRNA-i(6)A37 methylthiotransferase
tRNA-Ile
tRNA-Ile-GAU
tRNA(Ile)-lysidine synthetase
tRNA-intron endonuclease (EC 3.1.27.9)
tRNA-Leu
tRNA-Leu-CAA
tRNA-Leu-CAG
tRNA-Leu-GAG
tRNA-Leu-UAA
tRNA-Leu-UAG
tRNA-Lys
tRNA-Lys-CUU
tRNA-Lys-UUU
tRNA m5C48-49 methylase
tRNA:m(5)U-54 MTase gid
tRNA-Met
tRNA-Met-CAU
tRNA methylase Trm12p Wyeosine biosynthesis
tRNA methylase YGL050w homolog Wyeosine biosynthesis
tRNA methylase Yol141w homolog Wyeosine biosynthesis
tRNA N2,N2-dimethyl(Guanine26-N2)-methyltransferase (EC 2.1.1.32)
tRNA N6-threonylcarbamoyladenosine 2-methylthiotransferase (putative)
tRNA nucleotidyltransferase, A-adding (EC 2.7.7.-)
tRNA nucleotidyltransferase, CC-adding (EC 2.7.7.-)
tRNA nucleotidyltransferase (EC 2.7.7.25)
tRNA-Phe
tRNA-Phe-GAA
tRNA-Pro
tRNA-Pro-CGG
tRNA-Pro-GGG
tRNA-Pro-UGG
tRNA pseudouridine 13 synthase (EC 4.2.1.-)
tRNA pseudouridine 55 synthase Archaea
tRNA pseudouridine 55 synthase (EC 4.2.1.70)
tRNA pseudouridine synthase A (EC 4.2.1.70)
tRNA pseudouridine synthase B (EC 4.2.1.70)
tRNA/RNA cytosine-C5-methylase (EC 2.1.1.-)
tRNA-SeC
tRNA-SeC-UCA
tRNA-Ser
tRNA-Ser-CGA
tRNA-Ser-GCU
tRNA-Ser-GGA
tRNA-Ser-UGA
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)
tRNA-specific adenosine-34 deaminase subunit Tad3p
tRNA-splicing 2'-phosphotransferase (EC 2.7.-.-)
tRNA-splicing endonuclease subunit SEN15 (EC 3.1.27.9)
tRNA-splicing endonuclease subunit SEN2 (EC 3.1.27.9)
tRNA-splicing endonuclease subunit SEN34 (EC 3.1.27.9)
tRNA-splicing endonuclease subunit SEN54 (EC 3.1.27.9)
tRNA-splicing ligase (EC 6.5.1.3)
tRNA-splicing ligase (EC 6.5.1.3), plant type
tRNA-Thr
tRNA-Thr-CGU
tRNA-Thr-GGU
tRNA-Thr-UGU
tRNA-Trp
tRNA-Trp-CCA
tRNA-Tyr
tRNA-Tyr-GUA
tRNA(U54)-2-thioribothymidine synthetase
tRNA-Unknown
tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
tRNA-Val
tRNA-Val-CAC
tRNA-Val-GAC
tRNA-Val-UAC
Trypanothione synthetase (EC 6.3.1.9)
Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
Tryptophan 2-monooxygenase (EC 1.13.12.3)
Tryptophanase (EC 4.1.99.1)
Tryptophan synthase alpha chain (EC 4.2.1.20)
Tryptophan synthase beta chain (EC 4.2.1.20)
Tryptophanyl-tRNA synthetase (EC 6.1.1.2)
Tryptophanyl-tRNA synthetase (EC 6.1.1.2), mitochondrial
TsgA protein homolog
TTE0858 replicon stabilization protein (antitoxin to TTE0859)
TTE0859 replicon stabilization toxin
TtuB
tungsten-containing formate dehydrogenase alpha subunit
tungsten-containing formate dehydrogenase beta subunit
Twin-arginine translocation protein TatA
Twin-arginine translocation protein TatB
Twin-arginine translocation protein TatC
Twin-arginine translocation protein TatE
twitching motility protein PilG
twitching motility protein PilH
twitching motility protein PilJ
Twitching motility protein PilT
Two-component nitrogen fixation transcriptional regulator FixJ
Two-component oxygen-sensor histidine kinase FixL
Two-component regulator of vir regulon. VirA is a transmembrane histidine kinase
Two-component response regulator BceR
Two-component response regulator colocalized with HrtAB transporter
Two-component response regulator CreB
Two-component response regulator CreC
Two-component response regulator, malate (EC 2.7.3.-)
Two-component response regulator of vir regulon, VirG
Two-component response regulator SA14-24
Two-component response regulator VncR
Two-component response regulator yesN, associated with MetSO reductase
Two-component response regulator YvcP
Two-component sensor histidine kinase BceS
Two-component sensor histidine kinase FIG010008, sensor protein vraS (EC 2.7.13.3)
Two-component sensor histidine kinase, malate (EC 2.7.3.-)
Two-component sensor histidine kinase PleC
Two-component sensor kinase of vir regulon, VirA
Two-component sensor kinase SA14-24
Two-component sensor kinase YesM (EC 2.7.3.-)
Two-component sensor kinase yesM (EC 2.7.3.-), associated with MetSO reductase
Two-component sensor kinase YvcQ
Two-component sensor PilS
Two-component sensor protein RcsC (EC 2.7.3.-)
Two-component sensor protein RcsD (EC 2.7.3.-)
Two-component system histidine kinase
Two-component system histidine kinase DccS
Two-component system histidine kinase RacS
Two-component system response regulator
Two-component system response regulator CreC
Two-component system response regulator DccR
Two-component system response regulator QseB
Two-component system response regulator RacR
Two component transcriptional regulator VraR, LuxR family
Two-peptide bacteriocin peptide CibA
Two-peptide bacteriocin peptide CibB
type 1 fimbrae adaptor subunit FimF
type 1 fimbrae adaptor subunit FimG
type 1 fimbriae anchoring protein FimD
type 1 fimbriae major subunit FimA
type 1 fimbriae protein FimI, unknown function
type 1 fimbriae regulatory protein FimB
type 1 fimbriae regulatory protein FimE
type 4 fimbrial biogenesis protein FimU
Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation
Type cbb3 cytochrome oxidase biogenesis protein CcoH
Type cbb3 cytochrome oxidase biogenesis protein CcoI
Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion
Type III effector
Type III restriction-modification system DNA endonuclease res (EC 3.1.21.5)
Type III restriction-modification system methylation subunit (EC 2.1.1.72)
Type III restriction-modification system StyLTI enzyme res (EC 3.1.21.5)
Type III secretion and flagellar regulator RtsA
Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)
Type III secretion chaperone protein for YopD (SycD)
Type III secretion chaperone protein for YopE (SycE)
Type III secretion chaperone protein for YopH (SycH)
Type III secretion chaperone protein for YopN (SycN,YscB)
Type III secretion chaperone protein for YopT (SycT)
Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN)
Type III secretion cytoplasmic LcrG inhibitor (LcrV,secretion and targeting control protein, V antigen)
Type III secretion cytoplasmic plug protein (LcrG)
Type III secretion cytoplasmic protein (YscF)
Type III secretion cytoplasmic protein (YscI)
Type III secretion cytoplasmic protein (YscK)
Type III secretion cytoplasmic protein (YscL)
Type III secretion effector protein (YopR, encoded by YscH)
Type III secretion host injection and negative regulator protein (YopD)
Type III secretion host injection protein (YopB)
Type III secretion, hypotetical protein
Type III secretion injected virulence protein (EC 3.4.22.-,YopT,cysteine protease,depolymerizes actin filaments of cytoskeleton,causes cytotoxicity)
Type III secretion injected virulence protein (YopE)
Type III secretion injected virulence protein (YopH,tyrosine phosphatase of FAK and p130cas, prevents phagocytosis)
Type III secretion injected virulence protein (YopO,YpkA,serine-threonine kinase)
Type III secretion injected virulence protein (YopP,YopJ, induces apoptosis, prevents cytokine induction, inhibits NFkb activation)
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
Type III secretion inner membrane protein SctL
Type III secretion inner membrane protein SctS
Type III secretion inner membrane protein (YscD,homologous to flagellar export components)
Type III secretion inner membrane protein (YscQ,homologous to flagellar export components)
Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components)
Type III secretion inner membrane protein (YscS,homologous to flagellar export components)
Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
Type III secretion low calcium response protein (LcrR)
Type III secretion negative modulator of injection (YopK,YopQ,controls size of translocator pore)
Type III secretion negative regulator of effector production protein (LcrQ,YscM, YscM1 and YscM2)
Type III secretion outermembrane contact sensing protein( yopN,Yop4b,LcrE)
Type III secretion outermembrane negative regulator of secretion (TyeA)
Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
Type III secretion possible injected virulence protein (YopM)
Type III secretion protein (YscA)
Type III secretion protein (YscE)
Type III secretion protein (YscP)
Type III secretion spans bacterial envelope protein (YscG)
Type III secretion spans bacterial envelope protein (YscO)
Type III secretion system apparatus protein
Type III secretion system protein
Type III secretion system protein BsaR
Type III secretion thermoregulatory protein (LcrF,VirF,transcription regulation of virulence plasmid)
Type III secretion transcriptional activator HilA
Type III secretion transcriptional regulator HilC (= SirC)
Type III secretion transcriptional regulator HilD
Type III secretion transporter lipoprotein (YscW,VirG)
Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
Type II/IV secretion system protein TadC, associated with Flp pilus assembly
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
Type II secretion cytoplasmic ATP binding protein (PulE, ATPase)
Type II secretion outermembrane pore forming protein (PulD)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Type II secretory pathway, component PulF
Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)
Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)
Type I secretion outer membrane protein, TolC precursor
Type IV fimbriae expression regulatory protein PilR
Type IV fimbrial assembly, ATPase PilB
Type IV fimbrial assembly protein PilC
Type IV fimbrial biogenesis protein FimT
Type IV fimbrial biogenesis protein PilV
Type IV fimbrial biogenesis protein PilW
Type IV fimbrial biogenesis protein PilX
Type IV fimbrial biogenesis protein PilY1
Type IV fimbrial biogenesis protein PilY2
Type IV pilin PilA
type IV pili signal transduction protein PilI
Type IV pilus biogenesis protein PilE
type IV pilus biogenesis protein PilJ
Type IV pilus biogenesis protein PilM
Type IV pilus biogenesis protein PilN
Type IV pilus biogenesis protein PilO
Type IV pilus biogenesis protein PilP
Type IV pilus biogenesis protein PilQ
Type IV prepilin peptidase TadV/CpaA
Type IV secretion/competence protein (VirB10)
Type IV secretion/competence protein (VirB9)
Type IV secretion system protein VirD4
Type-IV sectretion leader peptidase/N-methyltransferase
Type VI secretion lipoprotein/VasD
Type VI secretion protein VasI
Type VI secretion-related protein VasL
Tyrosine-protein kinase BTK (EC 2.7.10.2)
Tyrosine-protein kinase EpsD (EC 2.7.10.2)
Tyrosine-protein kinase JAK2 (EC 2.7.10.2)
Tyrosine-protein kinase transmembrane modulator EpsC
Tyrosine-protein kinase Wzc (EC 2.7.10.2)
Tyrosine-protein phosphatase CpsB (EC 3.1.3.48)
Tyrosine recombinase XerC
Tyrosine-specific transport protein
Tyrosyl-tRNA synthetase (EC 6.1.1.1)
Tyrosyl-tRNA synthetase (EC 6.1.1.1), mitochondrial
Ubiquinol-cytochrome C chaperone
ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
ubiquinol-cytochrome c oxidoreductase subunit 6 (17 kDa)
Ubiquinol-cytochrome C reductase complex 11 kDa protein, mitochondrial precursor (EC 1.10.2.2)
Ubiquinol-cytochrome C reductase complex 14 kDa protein (EC 1.10.2.2)
Ubiquinol-cytochrome C reductase complex 6.3 kDa protein (EC 1.10.2.2)
Ubiquinol-cytochrome C reductase complex 6.4 kDa protein (EC 1.10.2.2)
Ubiquinol-cytochrome C reductase complex 7.2 kDa protein (EC 1.10.2.2)
Ubiquinol-cytochrome C reductase complex 8.5 kDa protein (EC 1.10.2.2)
Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial precursor (EC 1.10.2.2)
Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial precursor (EC 1.10.2.2)
ubiquinol-cytochrome C reductase complex protein like (8.7 kD) (3O550)
Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2)
Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)
Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)
Ubiquinone biosynthesis enzyme COQ7
Ubiquinone biosynthesis monooxgenase COQ6 (EC 1.14.13.-)
Ubiquinone biosynthesis monooxygenase UbiB
Ubiquinone biosynthesis protein COQ4, mitochondrial precursor
Ubiquinone biosynthesis protein COQ9, mitochondrial precursor
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5 (EC 2.1.1.-)
UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.-)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)
UDP-6-deoxy-AltdiNAc hydrolase (PseG, third step of pseudaminic acid biosynthesis)
UDP-Bac2Ac4Ac hydrolyzing 2-epimerase NeuC homolog
UDP-galactopyranose mutase (EC 5.4.99.9)
UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase WaaW (EC 2.4.1.-)
UDP-GlcNAc-specific C4,6 dehydratase/C5 epimerase (PseB, first step of pseudaminic acid biosynthesis)
UDP-glucoronosyl/UDP-glucosyl transferase family protein / contains similarity to glucosyltransferases; go_function: UDP-glycosyltransferase activity [goid 0008194]; go_function: transferase activity, transferring glycosyl groups [goid 0016757]
UDP-glucose 4-epimerase (EC 5.1.3.2)
UDP-glucose dehydrogenase (EC 1.1.1.22)
UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,2-glucosyltransferase (EC 2.4.1.58)
UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,3-glucosyltransferase WaaO (EC 2.4.1.-)
UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-)
UDP-glucose hexose 1-phosphate uridylyltransferase
UDP-glucose:sinapate glucosyltransferase (EC 2.4.1.120)
UDP-glucuronate 5'-epimerase (EC 5.1.3.12)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)
UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)
UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-)
UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)
UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D- alanyl ligase (EC 6.3.2.10)
UDP-sugar hydrolase (EC 3.6.1.45)
Uncharacterized ABC transporter, ATP-binding protein YrbF
Uncharacterized ABC transporter, auxiliary component YrbC
Uncharacterized ABC transporter, periplasmic component YrbD
Uncharacterized ABC transporter, permease component YrbE
Uncharacterized component of anaerobic dehydrogenases
uncharacterized domain
Uncharacterized fimbrial-like protein ygiL precursor
Uncharacterized glutathione S-transferase-like protein
Uncharacterized GST-like protein yghU associated with glutathionylspermidine synthetase/amidase
Uncharacterized GST-like protein yibF
Uncharacterized GST-like protein yncG
Uncharacterized lipoprotein YgeR precursor
Uncharacterized lipoprotein YmcC precursor
Uncharacterized membrane lipoprotein clustered with tellurite resistance proteins TehA/TehB
Uncharacterized membrane protein YqjD
Uncharacterized MobA-related protein
Uncharacterized monothiol glutaredoxin ycf64-like
Uncharacterized N-acetyltransferase BT9727_3663 (EC 2.3.1.-)
Uncharacterized outer membrane usher protein yqiG precursor
Uncharacterized protein, Bsl7517 homolog
Uncharacterized protein conserved in bacteria, NMA0228-like
Uncharacterized protein, homolog of B.subtilis yhgC
Uncharacterized protein homologous to Paeru. PA2364
Uncharacterized protein ImpA
Uncharacterized protein ImpB
Uncharacterized protein ImpC
Uncharacterized protein ImpD
Uncharacterized protein ImpF
Uncharacterized protein ImpH/VasB
Uncharacterized protein ImpI/VasC
Uncharacterized protein ImpJ/VasE
Uncharacterized protein in polymyxin biosynthetic cluster
Uncharacterized protein in putrescine utilization cluster
Uncharacterized protein Q1 colocalized with Q
Uncharacterized protein Rv0487/MT0505 clustered with mycothiol biosynthesis gene
Uncharacterized protein, similar to the N-terminal domain of Lon protease
Uncharacterized protein similar to VCA0109
Uncharacterized protein UPF0344
Uncharacterized protein with LysM domain, COG1652
Uncharacterized protein YaiN in in formaldehyde detoxification operon
Uncharacterized protein YeaC
Uncharacterized protein YeaG
Uncharacterized protein YfaD
Uncharacterized protein YfaU
Uncharacterized protein YfaW
Uncharacterized protein YfaZ precursor
Uncharacterized protein YgeP
Uncharacterized protein YgfJ
Uncharacterized protein YgfM
Uncharacterized protein YgfQ
Uncharacterized protein ygiD
Uncharacterized protein ygiV
Uncharacterized protein YhaL
Uncharacterized protein YhjG
Uncharacterized protein YkvT, NOT involved in spore germination
Uncharacterized protein YphG, TPR-domain containing
Uncharacterized protein YppC
Uncharacterized protein YqeB
Uncharacterized protein YqeC
Uncharacterized protein yqhG precursor
Uncharacterized protein yqiC
Uncharacterized protein YqjB
Uncharacterized protein YrbK clustered with lipopolysaccharide transporters
Uncharacterized protein YtfM precursor
Uncharacterized protein YtfN
Uncharacterized SAV1743 homolog
uncharacterized secreted protein, YBBR Bacillus subtilis homolog
Uncharacterized sigma-54-dependent transcriptional regulator YgeV
Uncharacterized spore germination protein YndD
Uncharacterized spore germination protein YndE
Uncharacterized spore germination protein YndF
Uncharacterized sugar kinase YdjH
Uncharacterized sugar kinase yeiI clustered with IndA
Uncharacterized transcriptional regulator YfaX, HTH-type
Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6)
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)
Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)
Universal stress protein A
Universal stress protein B
Universal stress protein C
Universal stress protein D
Universal stress protein E
Universal stress protein F
Universal stress protein family
Universal stress protein family 1
Universal stress protein family 2
Universal stress protein family 3
Universal stress protein family 4
Universal stress protein family 5
Universal stress protein family 6
Universal stress protein family 7
Universal stress protein family 8
Universal stress protein family COG0589
Universal stress protein G
Unknown, probably involved in type III secretion
Unsaturated fatty acid biosythesis repressor FabR, TetR family
Unspecified monosaccharide ABC transport system, ATP-binding protein
Unspecified monosaccharide ABC transport system, permease component 2
Unspecified monosaccharide ABC transport system, permease component I
Unspecified monosaccharide ABC transport system, permease component Ia (FIG025991)
Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)
Unspecified monosaccharide ABC transport system, substrate-binding component
UPF0118 membrane protein YrrI
UPF0125 protein yfjF
UPF0131 protein YtfP
UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide
UPF0229 protein YeaH
UPF0235 protein VC0458
UPF0246 protein YaaA
UPF0269 protein yggX
UPF0301 protein YqgE
UPF0313 protein ygiQ
UPF0319 protein YccT precursor
UPF0348 protein YlbM
UPF0441 protein ygiB
Uptake hydrogenase large subunit (EC 1.12.99.6)
Uptake hydrogenase small subunit precursor (EC 1.12.99.6)
Uracil-DNA glycosylase (EC 3.2.2.-)
Uracil permease
Uracil phosphoribosyltransferase (EC 2.4.2.9)
Uracil-xanthine permease
Urate oxidase (EC 1.7.3.3)
Urea ABC transporter, ATPase protein UrtD
Urea ABC transporter, ATPase protein UrtE
Urea ABC transporter, permease protein UrtB
Urea ABC transporter, permease protein UrtC
Urea ABC transporter, urea binding protein
Urea carboxylase
Urea carboxylase-related ABC transporter, ATPase protein
Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
Urea carboxylase-related ABC transporter, permease protein
Urea carboxylase-related amino acid permease
Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Urea channel UreI
Urease accessory protein UreD
Urease accessory protein UreE
Urease accessory protein UreF
Urease accessory protein UreG
Urease alpha subunit (EC 3.5.1.5)
Urease beta subunit (EC 3.5.1.5)
Urease gamma subunit (EC 3.5.1.5)
Ureidoglycolate dehydrogenase (EC 1.1.1.154)
Ureidoglycolate hydrolase (EC 3.5.3.19)
Ureidoglycolate/malate/sulfolactate dehydrogenase family (EC 1.1.1.-)
Uridine diphosphate glucose pyrophosphatase (EC 3.6.1.45)
Uridine kinase (EC 2.7.1.48)
Uridine kinase (EC 2.7.1.48) [C1]
Uridine phosphorylase (EC 2.4.2.3)
Uridylate kinase (EC 2.7.4.-)
Urocanate hydratase (EC 4.2.1.49)
Uronate isomerase (EC 5.3.1.12)
Uronate isomerase, family BH0493 (EC 5.3.1.12)
Uroporphyrinogen III decarboxylase (EC 4.1.1.37)
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Uroporphyrinogen-III synthase, divergent, Flavobacterial type (EC 4.2.1.75)
Uroporphyrinogen-III synthase, divergent, Francisella type (EC 4.2.1.75)
Uroporphyrinogen-III synthase (EC 4.2.1.75)
Utilization protein for unknown catechol-siderophore X
UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)
Uxu operon transcriptional regulator
Valine dehydrogenase (EC 1.4.1.-)
Valine--pyruvate aminotransferase (EC 2.6.1.66)
Valyl-tRNA synthetase (EC 6.1.1.9)
Valyl-tRNA synthetase (EC 6.1.1.9), mitochondrial
Vancomycin B-type resistance protein vanW
Vancomycin B-type resistance protein VanX
Vancomycin resistance protein VanH
Vancomycin response regulator VanR
Vancomycin Teicoplanin A-type resistance protein VanA
Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)
Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
Vanillin dehydrogenase (Hydroxybenzaldehyde dehydrogenase) (EC 1.2.1.28)
vannilate transporter VanK
VapB protein (antitoxin to VapC)
VapC toxin protein
Various polyols ABC transporter, ATP-binding component
Various polyols ABC transporter, periplasmic substrate-binding protein
Various polyols ABC transporter, permease component 1
Various polyols ABC transporter, permease component 2
very-long-chain fatty acid condensing enzyme, putative
Very-short-patch mismatch repair endonuclease (G-T specific)
Vfr transcriptional regulator
VgrG-3 protein
VgrG protein
Vibriobactin utilization protein ViuB
Vibrioferrin amide bond forming protein PvsB
Vibrioferrin amide bond forming protein PvsD
Vibrioferrin decarboxylase protein PvsE
Vibrioferrin ligase/carboxylase protein PvsA
Vibrioferrin membrane-spanning transport protein PvsC
Vibrioferrin receptor PvuA
Vi polysaccharide biosynthesis protein tviA
Vi polysaccharide biosynthesis protein tviB
Vi polysaccharide biosynthesis protein tviC
Vi polysaccharide biosynthesis protein tviD
Vi polysaccharide biosynthesis protein tviE
Vi polysaccharide export ATP-binding protein vexC
Vi polysaccharide export inner-membrane protein vexB
Vi polysaccharide export inner-membrane protein vexD
Vi polysaccharide export protein vexA
Vi polysaccharide export protein vexE
VirC1 protein promotes T-DNA transfer, ParA/MinD-like
VirD3 protein
Virulence-associated cell-wall-anchored protein SasG (LPXTG motif), binding to squamous nasal epithelial cells
Virulence-associated cell-wall-anchored protein SasH (LPXTG motif)
virulence cluster protein A, vclA
virulence cluster protein B, vclB
Virulence factor MviM
Virulence regulatory factor PrfA
Vitamin B12 ABC transporter, ATPase component BtuD
Vitamin B12 ABC transporter, B12-binding component BtuF
Vitamin B12 ABC transporter, permease component BtuC
Vitamin K-dependent protein S
Voltage-gated potassium channel
Von Willebrand factor, protease inhibitor I08.954
Von Willebrand factor type A domain protein, associated with Flp pilus assembly
V-type ATP synthase subunit A (EC 3.6.3.14)
V-type ATP synthase subunit B (EC 3.6.3.14)
V-type ATP synthase subunit C (EC 3.6.3.14)
V-type ATP synthase subunit D (EC 3.6.3.14)
V-type ATP synthase subunit E (EC 3.6.3.14)
V-type ATP synthase subunit F (EC 3.6.3.14)
V-type ATP synthase subunit G (EC 3.6.3.14)
V-type ATP synthase subunit H (EC 3.6.3.14)
V-type ATP synthase subunit I (EC 3.6.3.14)
V-type ATP synthase subunit K (EC 3.6.3.14)
Vulnibactin utilization protein VuuB
WARNINIG TorE protein
Xaa-Pro aminopeptidase (EC 3.4.11.9)
Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11)
Xanthan biosynthesis acetyltransferase GumF
Xanthan biosynthesis acetyltransferase GumG
Xanthan biosynthesis chain length determinant protein GumC
Xanthan biosynthesis exopolysaccharide polymerase GumE
Xanthan biosynthesis glucuronosyltransferase GumK
Xanthan biosynthesis glycosyltransferase GumD
Xanthan biosynthesis glycosyltransferase GumH
Xanthan biosynthesis glycosyltransferase GumI
Xanthan biosynthesis glycosyltransferase GumM
Xanthan biosynthesis oligosaccharidyl-lipid flippase GumJ
Xanthan biosynthesis pyruvyltransferase GumL
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)
Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)
Xanthine oxidase (EC 1.17.3.2)
Xanthine permease
Xanthine phosphoribosyltransferase (EC 2.4.2.-)
Xanthine transporter,putative
Xanthine/uracil/thiamine/ascorbate permease family protein
Xanthine/uracil transporter
Xanthosine/inosine triphosphate pyrophosphatase
Xanthosine operon regulatory protein XapR, LysR family
Xanthosine permease
Xanthosine permease, C-terminus
Xanthosine permease pseudogene caused by IS154 insertion
Xanthosine phosphorylase (EC 2.4.2.1)
XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
xylonate dehydratase (EC 4.2.1.82)
xylonolactonase (EC 3.1.1.68)
Xylose ABC transporter, periplasmic xylose-binding protein xylF
Xylose ABC transporter, permease protein xylH
Xylose activator XylR (AraC family)
Xylose isomerase (EC 5.3.1.5)
Xylose repressor XylR (ROK family)
Xyloside transporter XynT
Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)
Xylulose kinase (EC 2.7.1.17)
YabP protein
YafQ toxin protein
YafW protein (antitoxin to YkfI)
Ycf36 protein
YcgN (Fragment)
YciO family
YeeC-like protein
YeeU protein (antitoxin to YeeV)
YeeV toxin protein
YefM protein (antitoxin to YoeB)
YfaA
YfjZ protein (antitoxin to YpjF)
YgfY COG2938
YGGT family protein
YgiN protei involved in menadione metabolism
YhfA Protein in tra region of some IncF plasmids
YidD
YjbE secreted protein
YjbF outer membrane lipoprotein
YjbG polysaccharide synthesis-related protein
YjbH-like, GTP pyrophosphokinase domain
YjbH outer membrane lipoprotein
YjeF protein, C-terminal domain
YjeF protein, function unknown
YkfI toxin protein
YlbN-like protein
YlxP-like protein
Ync
Ynd
YoeB toxin protein
YpjF toxin protein
YqxM protein, required for localization of TasA to extracellular matrix
Z4855 protein
Zeaxanthin glucosyl transferase
Zinc ABC transporter, ATP-binding protein ZnuC
Zinc ABC transporter, inner membrane permease protein ZnuB
Zinc ABC transporter, periplasmic-binding protein ZnuA
Zinc finger, TFIIB-type domain protein
Zinc metalloproteinase precursor (EC 3.4.24.29)
Zinc-regulated outer membrane receptor
Zinc-regulated TonB-dependent outer membrane receptor
Zinc resistance-associated protein
Zinc transporter, ZIP family
Zinc transporter ZitB
Zinc transporter zupT
Zinc-type alcohol dehydrogenase YcjQ
Zinc uptake regulation protein ZUR
Zn-dependent hydrolase (beta-lactamase superfamily)
Zn-dependent hydrolase (beta-lactamase superfamily) within prophage
Zn-dependent hydrolase, RNA-metabolising
Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog
Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog
Zn(II) and Co(II) transmembrane diffusion facilitator
Zona occludens toxin
Z-ring-associated protein ZapA
//
10 kDa culture filtrate antigen CFP-10 (EsxB)	ESAT-6_proteins_secretion_system_in_Actinobacteria
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)	Methionine_Salvage
1,2-dihydroxybenzyl pyruvate aldolase	Naphtalene_and_antracene_degradation
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)	Chlorobenzoate_degradation	Benzoate_degradation	Phenylpropionate_Degradation
1,2-dihydroxynaphthalene dioxygenase	Naphtalene_and_antracene_degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
12-oxophytodienoate reductase (OPR3)(DDE1)	Octadecanoids
1,4-alpha-glucan branching enzyme (EC 2.4.1.18)	Sucrose_Metabolism	Cellulosome
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	Glycogen_metabolism	Trehalose_Biosynthesis
1,4-alpha-glucan phosphorylase (EC 2.4.1.1)	Sucrose_Metabolism
1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.-)	Menaquinone_and_Phylloquinone_Biosynthesis
14 kDa peptide of ubiquinol-cytochrome C2 oxidoreductase complex	Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes
15,16-dihydrobiliverdin:ferredoxin oxidoreductase PebA (EC 1.3.7.2)	Bilin_Biosynthesis
16S rRNA m(5)C 967 methyltransferase (EC 2.1.1.-)	CBSS-314225.3.peg.515	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase
16S rRNA processing protein RimM	Ribosome_biogenesis_bacterial	KH_domain_RNA_binding_protein_YlqC
1-acyl-sn-glycerol-3-phosphate acyltransferase	CBSS-218491.3.peg.427
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphate_metabolism
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	CBSS-83331.1.peg.3039	Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	polyprenyl_synthesis	Isoprenoid_Biosynthesis
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	Isoprenoid_Biosynthesis	Pyridoxin_(Vitamin_B6)_Biosynthesis
1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase	N-heterocyclic_aromatic_compound_degradation
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.4.3)	CBSS-83331.1.peg.3039	Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	Isoprenoid_Biosynthesis
1-phosphofructokinase (EC 2.7.1.56)	Fructose_utilization
1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22)	Proline,_4-hydroxyproline_uptake_and_utilization
21 kDa hemolysin precursor	CBSS-160492.1.peg.550
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	Lysine_Biosynthesis_DAP_Pathway
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	Lysine_Biosynthesis_DAP_Pathway
2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal type (EC 5.4.2.1)	Threonine_and_Homoserine_Biosynthesis	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)	Glycolysis_and_Gluconeogenesis	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)	Acetoin,_butanediol_metabolism
2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)	Acetoin,_butanediol_metabolism
2,3-butanediol dehydrogenase, S-alcohol forming, (S)-acetoin-specific (EC 1.1.1.76)	Acetoin,_butanediol_metabolism
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	pyrimidine_conversions	Purine_conversions	Glutathione-regulated_potassium-efflux_system_and_associated_functions
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport	Iron_acquisition_in_Vibrio
2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase(CmtB) (EC 1.1.1.100)	p-cymene_degradation
2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase (EC 1.3.1.-)	Flavohaemoglobin	Cinnamic_Acid_Degradation	Naphtalene_and_antracene_degradation	Phenylpropionate_Degradation	Phenylpropanoid_compound_degradation
2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport	Iron_acquisition_in_Vibrio
2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58), pyochelin biosynthesis protein PchD	Siderophore_pyochelin
2,3-dihydroxybiphenyl 1,2-dioxygenase	Biphenyl_Degradation
2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC)	p-cymene_degradation
2,3-dihydroxyphenylpropionate 1,2-dioxygenase (EC 1.13.11.-)	Cinnamic_Acid_Degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
2,3-diketo-5-methylthiopentyl-1-phosphate enolase	Calvin-Benson_cycle	Methionine_Salvage
2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase (EC 3.1.3.77)	Methionine_Salvage
2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor	2,3-diketo-L-gulonate_TRAP_transporter
2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN	2,3-diketo-L-gulonate_TRAP_transporter
2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM	2,3-diketo-L-gulonate_TRAP_transporter
2,4-diaminopentanoate dehydrogenase (EC 1.4.1.12)	Anaerobic_Oxidative_Degradation_of_L-Ornithine
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-)	Aromatic_amino_acid_degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	4-Hydroxyphenylacetic_acid_catabolic_pathway
2,4-diketo-3-deoxy-L-fuconate hydrolase	L-fucose_utilization	L-fucose_utilization_temp
2,5-diketo-D-gluconate reductase A (EC 1.1.1.274)	D-gluconate_and_ketogluconates_metabolism
2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274)	D-gluconate_and_ketogluconates_metabolism
2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)	Citrate_Metabolism,_Transport,_and_Regulation
2-(acetamidomethylene)succinate hydrolase (EC 3.5.1.29)	Pyridoxin(Vitamin_B6)_Degradation_Pathway
2-Amino-2-deoxy-isochorismate hydrolase (EC 3.-.-.-)	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
2-Amino-2-deoxy-isochorismate synthase (EC 4.1.3.-)	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC 2.5.1.-)	Chorismate_Synthesis	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45)	Tryptophan_catabolism
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	Glycine_Biosynthesis	Glycine_and_Serine_Utilization	Threonine_degradation
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	Pterin_metabolism_3	Folate_Biosynthesis	Methanopterin_biosynthesis2	YgfZ	CBSS-235.1.peg.567
2-amino-4-ketopentanoate thiolase, alpha subunit	Anaerobic_Oxidative_Degradation_of_L-Ornithine
2-amino-4-ketopentanoate thiolase, beta subunit	Anaerobic_Oxidative_Degradation_of_L-Ornithine
2'-aminobiphenyl-2,3-diol 1,2-dioxygenase	carbazol_degradation_cluster
2-aminoethylphosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	Phosphonate_metabolism
2-aminoethylphosphonate ABC transporter periplasmic binding component (TC 3.A.1.9.1)	Phosphonate_metabolism
2-aminoethylphosphonate ABC transporter permease protein II (TC 3.A.1.9.1)	Phosphonate_metabolism
2-aminoethylphosphonate ABC transporter permease protein I (TC 3.A.1.9.1)	Phosphonate_metabolism
2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)	Phosphonate_metabolism	Phosphoenolpyruvate_phosphomutase
2-aminoethylphosphonate uptake and metabolism regulator	Phosphonate_metabolism
2-aminomuconate deaminase (EC 3.5.99.5)	Tryptophan_catabolism
2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32)	Tryptophan_catabolism
2-chlorobenzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.13)	Chlorobenzoate_degradation
2-chlorobenzoate 1,2-dioxygenase beta subunit (EC 1.14.12.13)	Chlorobenzoate_degradation
2-chlorobenzoate 1,2-dioxygenase (EC 1.14.12.13)	Benzoate_degradation
2-chlorobenzoate 1,2-dioxygenase reductase component	Chlorobenzoate_degradation
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	polyprenyl_synthesis	Isoprenoid_Biosynthesis
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	Teichoic_and_lipoteichoic_acids_biosynthesis	polyprenyl_synthesis	Isoprenoid_Biosynthesis
2-cys peroxiredoxin BAS1, chloroplast precursor	Phytosterol_biosynthesis
2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)	D-galactonate_catabolism
2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)	D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate_metabolism
2-dehydro-3-deoxygluconate aldolase (EC 4.1.2-)	Entner-Doudoroff_Pathway
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	D-Galacturonate_Utilization	D-Galacturonate_and_D-Glucuronate_Utilization	Sugar_utilization_in_Thermotoga	Entner-Doudoroff_Pathway
2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)	D-galactonate_catabolism
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	D-Galacturonate_Utilization	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	D-gluconate_and_ketogluconates_metabolism	D-Galacturonate_and_D-Glucuronate_Utilization	Sugar_utilization_in_Thermotoga	Entner-Doudoroff_Pathway
2-dehydropantoate 2-reductase (EC 1.1.1.169)	CBSS-269801.1.peg.1725	Coenzyme_A_Biosynthesis
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase BchC	Chlorophyll_Biosynthesis
2-haloalkanoic acid dehalogenase (EC 3.8.1.2)	CBSS-323850.3.peg.3269
2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.-)	Menaquinone_and_Phylloquinone_Biosynthesis
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase	Methionine_Salvage
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	CBSS-502800.3.peg.2785	Allantoin_degradation	D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Allantoin_Utilization	Glycerate_metabolism	Photorespiration_(oxidative_C2_cycle)
2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (EC 3.7.1.-)	Cinnamic_Acid_Degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	Biphenyl_Degradation	carbazol_degradation_cluster
2-hydroxychromene-2-carboxylate isomerase	Naphtalene_and_antracene_degradation
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)	4-Hydroxyphenylacetic_acid_catabolic_pathway
2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9)	CBSS-232721.5.peg.360	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
2-hydroxypent-2,4-dienoate hydratase (EC 4.2.-.-)	carbazol_degradation_cluster
2-hydroxypenta-2,4-dienoate hydratase (CmtF) (EC 4.2.1.-)	p-cymene_degradation
2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase alpha subunit (EC 1.1.1.35)	Anaerobic_toluene_and_ethylbenzene_degradation
2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase beta subunit (EC 1.1.1.35)	Anaerobic_toluene_and_ethylbenzene_degradation
2-hydroxyphytanoyl-CoA lyase-related protein [EC:4.1.-.-]	Alkaloid_biosynthesis_from_L-lysine
2-isopropylmalate synthase (EC 2.3.3.13)	Leucine_Biosynthesis	Branched-Chain_Amino_Acid_Biosynthesis
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	Chorismate_Synthesis	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	Chorismate_Synthesis	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)	Chorismate_Synthesis	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II PhzC (EC 2.5.1.54)	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	Chorismate_Synthesis	A_Gammaproteobacteria_Cluster_Relating_to_Translation	KDO2-Lipid_A_biosynthesis	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
2-keto-3-deoxygluconate permease (KDG permease)	D-Galacturonate_Utilization	D-Galacturonate_and_D-Glucuronate_Utilization
2-keto-3-deoxy-L-fuconate dehydrogenase	L-fucose_utilization	L-fucose_utilization_temp
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	Salicylate_and_gentisate_catabolism	Benzoate_transport_and_degradation_cluster	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	Gentisare_degradation
2-keto-4-pentenoate hydratase (EC 4.2.1.-)	Cinnamic_Acid_Degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	Fermentations:_Lactate	Biphenyl_Degradation	Tryptophan_catabolism
2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-)	2-Ketogluconate_Utilization	D-gluconate_and_ketogluconates_metabolism
2-ketobutyrate formate-lyase (EC 2.3.1.-)	Threonine_anaerobic_catabolism_gene_cluster
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, cytochrome c	D-gluconate_and_ketogluconates_metabolism
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, flavoprotein	D-gluconate_and_ketogluconates_metabolism
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, gamma subunit	D-gluconate_and_ketogluconates_metabolism
2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)	2-Ketogluconate_Utilization
2-ketogluconate kinase (EC 2.7.1.13)	2-Ketogluconate_Utilization	D-gluconate_and_ketogluconates_metabolism
2-ketogluconate transporter	2-Ketogluconate_Utilization
2-ketogluconate utilization repressor PtxS	2-Ketogluconate_Utilization
2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)	Xylose_utilization	L-Arabinose_utilization
2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase (EC 1.14.12.4)	Pyridoxin(Vitamin_B6)_Degradation_Pathway
2-methyl-6-phytyl-1,4-benzoquinone cyclase	Tocopherol_Biosynthesis
2-methyl-6-phytyl-1,4-benzoquinone methyltransferase	Tocopherol_Biosynthesis
2-methyl-6-solanyl-1,4-benzoquinone methyltransferase	Plastoquinone_Biosynthesis
2-methylaconitate racemase	2-methylcitrate_to_2-methylaconitate_metabolism_cluster
2-Methylcitrate dehydratase AcnD	2-methylcitrate_to_2-methylaconitate_metabolism_cluster
2-methylcitrate dehydratase (EC 4.2.1.79)	Methylcitrate_cycle	Propionate-CoA_to_Succinate_Module
2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)	Methylcitrate_cycle	Propionate-CoA_to_Succinate_Module
2-methylcitrate synthase (EC 2.3.3.5)	Methylcitrate_cycle	Propionate-CoA_to_Succinate_Module
2-methylisocitrate dehydratase (EC 4.2.1.99)	Methylcitrate_cycle	Propionate-CoA_to_Succinate_Module
2-nitropropane dioxygenase (EC 1.13.11.32)	CBSS-164757.7.peg.5020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)	Ubiquinone_Biosynthesis	CBSS-87626.3.peg.3639
2-octaprenyl-6-methoxyphenol hydroxylase (EC 1.14.13.-)	Ubiquinone_Biosynthesis	CBSS-87626.3.peg.3639
2'-O-glycosyltransferase CruG	Myxoxanthophyll_biosynthesis_in_Cyanobacteria
2-Oxobutyrate dehydrogenase E1 (EC:1.2.4.1)	Methionine_Degradation
2-Oxobutyrate oxidase, putative	Methionine_Degradation
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	TCA_Cycle	Dehydrogenase_complexes
2-oxoglutarate/malate translocator	Photorespiration_(oxidative_C2_cycle)
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)	TCA_Cycle	CBSS-335541.4.peg.1350
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)	TCA_Cycle	CBSS-335541.4.peg.1350
2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3)	TCA_Cycle	CBSS-335541.4.peg.1350
2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3)	TCA_Cycle	CBSS-335541.4.peg.1350
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)	Benzoate_transport_and_degradation_cluster	Aromatic_amino_acid_degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	4-Hydroxyphenylacetic_acid_catabolic_pathway
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases	CBSS-232721.5.peg.360	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	Phenylpropionate_Degradation
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	Menaquinone_and_Phylloquinone_Biosynthesis
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	Menaquinone_and_Phylloquinone_Biosynthesis
2-vinyl bacteriochlorophyllide hydratase BchF (EC 4.2.1.-)	Carotenoids	Chlorophyll_Biosynthesis
3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)	Inorganic_Sulfur_Assimilation
3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-)	Cinnamic_Acid_Degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
33 kDa chaperonin (Heat shock protein 33) (HSP33)	CBSS-584.1.peg.3382
3,4-dihydroxy-2-butanone 4-phosphate synthase	riboflavin_to_FAD	Riboflavin,_FMN_and_FAD_metabolism
3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase (EC 2.1.1.114)	Ubiquinone_Biosynthesis
3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15)	Aromatic_amino_acid_degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	4-Hydroxyphenylacetic_acid_catabolic_pathway	Aromatic_Amin_Catabolism
3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	CBSS-342610.3.peg.1794	cAMP_signaling_in_bacteria
3,5-diaminobexanoate dehydrogenase (EC 1.4.1.11)	Lysine_fermentation
3,7-dideoxy-D-threo-hepto-2, 6-diulosonate synthase (EC 4.2.3.-)	Chorismate_Synthesis	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
3-aminobutyrl-CoA ammonia lyase (EC 4.3.1.14)	Lysine_fermentation
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)	Protocatechuate_branch_of_beta-ketoadipate_pathway
3-dehydro-L-gulonate 2-dehydrogenase (EC 1.1.1.130)	L-ascorbate_utilization_(and_related_gene_clusters)
3-dehydroquinate dehydratase I (EC 4.2.1.10)	Chorismate_Synthesis	Quinate_degradation	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
3-dehydroquinate dehydratase II (EC 4.2.1.10)	Chorismate_Synthesis	Quinate_degradation	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
3-dehydroquinate synthase (EC 4.2.3.4)	Type_IV_pilus	Chorismate_Synthesis	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
3-dehydroshikimate dehydratase	Quinate_degradation
3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)	Ubiquinone_Biosynthesis
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	KDO2-Lipid_A_biosynthesis
3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-)	Vibrio_Core_Oligosaccharide_Biosynthesis
3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	Vibrio_Core_Oligosaccharide_Biosynthesis	LOS_core_oligosaccharide_biosynthesis	KDO2-Lipid_A_biosynthesis	Lipopolysaccharide-related_cluster_in_Alphaproteobacteria
3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	KDO2-Lipid_A_biosynthesis
3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase (EC 4.1.1.51)	Pyridoxin(Vitamin_B6)_Degradation_Pathway
3-hydroxy-3isohexenylglutaryl-CoA:acetate lyase	Acyclic_terpenes_utilization
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	n-Phenylalkanoic_acid_degradation	Valine_degradation	Acetyl-CoA_fermentation_to_Butyrate	Polyhydroxybutyrate_metabolism	Isoleucine_degradation
3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)	Branched_chain_amino_acid_degradation_regulons	Isobutyryl-CoA_to_Propionyl-CoA_Module
3-hydroxyacyl-CoA dehydrogenase PaaC (EC 1.1.1.-)	Phenylacetyl-CoA_catabolic_pathway_(core)
3-hydroxyacyl-CoA dehydrogenase (PaaH) (EC 1.1.1.157)	Benzoate_transport_and_degradation_cluster
3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6)	Quinolinic_acid_and_its_derivatives	NAD_and_NADP_cofactor_biosynthesis_global	Tryptophan_catabolism
3-hydroxybutyrate dehydrogenase (EC 1.1.1.30)	Acetyl-CoA_fermentation_to_Butyrate
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	Valine_degradation	Acetone_Butanol_Ethanol_Synthesis	Acetyl-CoA_fermentation_to_Butyrate	Polyhydroxybutyrate_metabolism
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Butanol_Biosynthesis	Anaerobic_benzoate_metabolism	Acetone_Butanol_Ethanol_Synthesis	Acetyl-CoA_fermentation_to_Butyrate	Polyhydroxybutyrate_metabolism
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	n-Phenylalkanoic_acid_degradation	Acetyl-CoA_fermentation_to_Butyrate	Polyhydroxybutyrate_metabolism
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, alternative (EC 4.2.1.60)	Unsaturated_Fatty_Acid_Metabolism
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)	Unsaturated_Fatty_Acid_Metabolism	Fatty_Acid_Biosynthesis_FASII
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60), inferred for ABFAE pathway	CBSS-218491.3.peg.427
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)	Branched_chain_amino_acid_degradation_regulons	Valine_degradation	Isobutyryl-CoA_to_Propionyl-CoA_Module
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)	Branched_chain_amino_acid_degradation_regulons	Valine_degradation	Isobutyryl-CoA_to_Propionyl-CoA_Module
3-hydroxyphenylpropionic acid transporter	Phenylpropanoid_compound_degradation
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Leucine_Biosynthesis	Branched-Chain_Amino_Acid_Biosynthesis
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Leucine_Biosynthesis	Branched-Chain_Amino_Acid_Biosynthesis
3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Leucine_Biosynthesis	Branched-Chain_Amino_Acid_Biosynthesis	CBSS-344610.3.peg.2335
3-keto-5-aminohexanoate cleavage enzyme	Lysine_fermentation
3-ketoacyl-CoA thiolase (EC 2.3.1.16)	n-Phenylalkanoic_acid_degradation	Biotin_biosynthesis	Serine-glyoxylate_cycle	CBSS-246196.1.peg.364	Fatty_acid_degradation_regulons	Polyhydroxybutyrate_metabolism	Isoleucine_degradation
3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)	Branched_chain_amino_acid_degradation_regulons	Isobutyryl-CoA_to_Propionyl-CoA_Module	Isoleucine_degradation
3-keto-L-gulonate 6-phosphate decarboxylase	L-ascorbate_utilization_(and_related_gene_clusters)
3-keto-L-gulonate 6-phosphate decarboxylase homolog	L-ascorbate_utilization_(and_related_gene_clusters)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	Coenzyme_A_Biosynthesis	CBSS-280355.3.peg.2835
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	mycolic_acid_synthesis	CBSS-164757.7.peg.5020	CBSS-198215.1.peg.1051	Fatty_Acid_Biosynthesis_FASII	CBSS-392499.4.peg.4257	CBSS-246196.1.peg.364
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), inferred for ABFAE pathway	CBSS-218491.3.peg.427
3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) in cluster with unspecified monosaccharide transporter	Unspecified_monosaccharide_transport_cluster	CBSS-257314.1.peg.676
3-oxoacyl-(acyl-carrier-protein) synthase	CBSS-218491.3.peg.427
3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41), FabV inferred for ABFAE pathway	CBSS-218491.3.peg.427
3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41), inferred for ABFAE pathway	CBSS-218491.3.peg.427
3-oxoacyl-[acyl-carrier-protein] synthase, KASI, alternative (EC 2.3.1.41)	Unsaturated_Fatty_Acid_Metabolism	Fatty_Acid_Biosynthesis_FASII
3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)	Unsaturated_Fatty_Acid_Metabolism	Fatty_Acid_Biosynthesis_FASII
3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	mycolic_acid_synthesis	CBSS-198215.1.peg.1051	Unsaturated_Fatty_Acid_Metabolism	Fatty_Acid_Biosynthesis_FASII	CBSS-218491.3.peg.427
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	CBSS-198215.1.peg.1051	Fatty_Acid_Biosynthesis_FASII
3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)	Catechol_branch_of_beta-ketoadipate_pathway	Chloroaromatic_degradation_pathway	Protocatechuate_branch_of_beta-ketoadipate_pathway
3-Oxoadipate CoA-transferase subunit A (EC 2.8.3.6)	Benzoate_catabolism
3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6)	Catechol_branch_of_beta-ketoadipate_pathway	Chloroaromatic_degradation_pathway	Protocatechuate_branch_of_beta-ketoadipate_pathway
3-Oxoadipate CoA-transferase subunit B (EC 2.8.3.6)	Benzoate_catabolism
3-Oxoadipate enol-lactonase (EC 3.1.1.24)	Benzoate_catabolism	Chloroaromatic_degradation_pathway
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase	Protocatechuate_branch_of_beta-ketoadipate_pathway
3-phenylpropionate dioxygenase, alpha subunit (EC 1.14.12.19)	Flavohaemoglobin	Cinnamic_Acid_Degradation	Phenylpropionate_Degradation
3-phenylpropionate dioxygenase, beta subunit (EC 1.14.12.19)	Flavohaemoglobin	Cinnamic_Acid_Degradation	Phenylpropionate_Degradation
3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component (EC 1.18.1.3)	Flavohaemoglobin	Cinnamic_Acid_Degradation	Phenylpropionate_Degradation
3-phenylpropionate dioxygenase ferredoxin subunit	Flavohaemoglobin	Cinnamic_Acid_Degradation	Phenylpropionate_Degradation
3'-phosphoadenosine 5'-phosphosulfate sulfurtransferase DndC	DNA_phosphorothioation
3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)	Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone_Biosynthesis
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)	Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone_Biosynthesis
(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-)	Fatty_Acid_Biosynthesis_FASII	CBSS-218491.3.peg.427
3'-to-5' exoribonuclease RNase R	RNA_processing_and_degradation,_bacterial
4,4'-diapolycopene oxidase	Carotenoids
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	Maltose_and_Maltodextrin_Utilization	Glycogen_metabolism
4-amino, 4-deoxychorismate mutase (EC 5.4.99.-)	Chorismate_Synthesis	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
4-amino-4-deoxychorismate synthase, amidotransferase component , aminase component (EC 2.6.1.-)	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
4-amino, 4-deoxyprephenate dehydrogenase (EC 1.3.1.-)	Chorismate_Synthesis	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase	N-linked_Glycosylation_in_Bacteria
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19)	Putrescine_utilization_pathways	Polyamine_Metabolism
4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	Protocatechuate_branch_of_beta-ketoadipate_pathway
4-coumarate--CoA ligase 1 (EC 6.2.1.12)	Phenylpropanoids_general_biosynthesis	Lignine_biosynthesis	Flavanone_biosynthesis	Phytoalexin_biosynthesis	Caffeic_acid_derivatives
4-cresol dehydrogenase [hydroxylating] cytochrome c subunit precursor	Cresol_degradation
4-cresol dehydrogenase [hydroxylating] flavoprotein subunit (EC 1.17.99.1)	Cresol_degradation
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	polyprenyl_synthesis	A_Gammaproteobacteria_Cluster_Relating_to_Translation	Isoprenoid_Biosynthesis
4Fe-4S ferredoxin, iron-sulfur binding	Inorganic_Sulfur_Assimilation
4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16)	Glyoxylate_bypass	Proline,_4-hydroxyproline_uptake_and_utilization
4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)	Cinnamic_Acid_Degradation	CBSS-232721.5.peg.360	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	Fermentations:_Lactate	Biphenyl_Degradation	carbazol_degradation_cluster	Tryptophan_catabolism
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	polyprenyl_synthesis	Isoprenoid_Biosynthesis
4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)	Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone_Biosynthesis
4-hydroxybenzoate transporter	Salicylate_and_gentisate_catabolism	Cinnamic_Acid_Degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	p-Hydroxybenzoate_degradation	Gentisare_degradation	Phenylpropanoid_compound_degradation
4-hydroxybenzoyl-CoA reductase, beta subunit (EC 1.3.99.20)	Benzoate_transport_and_degradation_cluster
4-hydroxybenzoyl-CoA reductase, gamma subunit (EC 1.3.99.20)	Benzoate_transport_and_degradation_cluster
4-hydroxybenzoyl-CoA thioesterase domain protein	CBSS-218491.3.peg.427
4-hydroxybenzoyl-CoA thioesterase family active site	Ton_and_Tol_transport_systems
4-hydroxycinnamoyl CoA hydratase/lyase (Enoyl-CoA hydratase/lyase) (EC 4.2.1.17)	Phenylpropanoid_compound_degradation
4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	4-Hydroxyphenylacetic_acid_catabolic_pathway	Aromatic_Amin_Catabolism
4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-)	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	4-Hydroxyphenylacetic_acid_catabolic_pathway	Aromatic_Amin_Catabolism
4-hydroxyphenylacetate symporter, major facilitator superfamily (MFS)	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	4-Hydroxyphenylacetic_acid_catabolic_pathway
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	Plastoquinone_Biosynthesis	Pterin_metabolism_3	Pterin_carbinolamine_dehydratase	Homogentisate_pathway_of_aromatic_compound_degradation	Aromatic_amino_acid_degradation	Tocopherol_Biosynthesis
4-hydroxyproline epimerase (EC 5.1.1.8)	Proline,_4-hydroxyproline_uptake_and_utilization
4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	EC49-61	Pyridoxin_(Vitamin_B6)_Biosynthesis
4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase	N-linked_Glycosylation_in_Bacteria	C_jejuni_colonization_of_chick_caeca
4-oxalocrotonate decarboxylase (EC 4.1.1.77)	CBSS-232721.5.peg.360	Benzoate_transport_and_degradation_cluster	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	Tryptophan_catabolism
4-oxalocrotonate tautomerase (EC 5.3.2.-)	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
4'-phosphopantetheinyl transferase (EC 2.7.8.-)	Fatty_Acid_Biosynthesis_FASII
4'-phosphopantetheinyl transferase (EC 2.7.8.-) in polymyxin biosynthetic cluster	Polymyxin_Synthetase_Gene_Cluster_in_Bacillus
4'-phosphopantetheinyl transferase entD (EC 2.7.8.-)	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport
4-pyridoxic acid dehydrogenase	Pyridoxin(Vitamin_B6)_Degradation_Pathway
4-pyridoxolactonase (EC 3.1.1.27)	Pyridoxin(Vitamin_B6)_Degradation_Pathway
50S ribosomal protein acetyltransferase	CBSS-176279.3.peg.868
50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Universal_GTPases
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	One-carbon_metabolism_by_tetrahydropterines	5-FCL-like_protein	Serine-glyoxylate_cycle	YgfZ	Methionine_Biosynthesis
5,10-Methylenetetrahydrofolate reductase (EC 1.7.99.5)	Acetyl-CoA_pathway_of_CO2_fixation
5,6-dimethylbenzimidazole synthase, flavin destructase family	Coenzyme_B12_biosynthesis
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	Riboflavin,_FMN_and_FAD_metabolism
5-aminolevulinate synthase (EC 2.3.1.37)	Heme_and_Siroheme_Biosynthesis	Experimental_tye	Threonine_degradation
5-aminopentanamidase (EC 3.5.1.30)	Lysine_degradation
5-aminovalerate aminotransferase (EC 2.6.1.48)	Lysine_degradation
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)	Aromatic_amino_acid_degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	4-Hydroxyphenylacetic_acid_catabolic_pathway
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60)	CBSS-232721.5.peg.360	Aromatic_amino_acid_degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	4-Hydroxyphenylacetic_acid_catabolic_pathway
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68)	Aromatic_amino_acid_degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	CBSS-243277.1.peg.4359	4-Hydroxyphenylacetic_acid_catabolic_pathway
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase	tRNA_processing	tRNA_modification_Archaea
5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)	D-galactarate,_D-glucarate_and_D-glycerate_catabolism
5-deoxy-glucuronate isomerase (EC 5.3.1.-)	Inositol_catabolism
5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	Chorismate_Synthesis	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)
5-FCL-like protein	One-carbon_metabolism_by_tetrahydropterines	5-FCL-like_protein	Serine-glyoxylate_cycle
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	One-carbon_metabolism_by_tetrahydropterines	Folate_transporters	Folate_Biosynthesis	5-FCL-like_protein	Serine-glyoxylate_cycle
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)	Inositol_catabolism
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase [form 2] (EC 4.1.2.29)	Inositol_catabolism
5-keto-2-deoxygluconokinase (EC 2.7.1.92)	Inositol_catabolism
5-keto-D-gluconate 5-reductase (EC 1.1.1.69)	D-gluconate_and_ketogluconates_metabolism
5-methyl-dCTP pyrophosphohydrolase (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
5-methyltetrahydrofolate corrinoid iron sulfur protein methyltransferase	Acetyl-CoA_pathway_of_CO2_fixation
5-methyltetrahydrofolate:corrinoid iron-sulfur protein methyltransferase	Carbon_monoxide_induced_hydrogenase
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	Carbon_monoxide_induced_hydrogenase	Methionine_Biosynthesis
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	Methionine_Biosynthesis
5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	Menaquinone_Biosynthesis_via_Futalosine	CBSS-320388.3.peg.3759	Polyamine_Metabolism	Adenosyl_nucleosidases	Methionine_Salvage
5'-methylthioadenosine phosphorylase (EC 2.4.2.28)	Menaquinone_Biosynthesis_via_Futalosine	Methionine_Salvage
5-methylthioribose kinase (EC 2.7.1.100)	Methionine_Salvage
5'-nucleotidase (EC 3.1.3.5)	CBSS-393123.3.peg.2365	pyrimidine_conversions	CBSS-176279.3.peg.298	Purine_conversions
5'-nucleotidase surE (EC 3.1.3.5)	Housecleaning_nucleoside_triphosphate_pyrophosphatases	CBSS-269801.1.peg.1725	Folate_Biosynthesis
5'-nucleotidase YjjG (EC 3.1.3.5)	Housecleaning_nucleoside_triphosphate_pyrophosphatases
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase.	Aromatic_amino_acid_degradation
5-oxoprolinase (EC 3.5.2.9)	Glutathione_Redox_Metabolism_3	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle
5S rRNA	rRNAs
5-tetrahydromethanopterin:corrinoid iron-sulfur protein methyltransferase	Carbon_monoxide_induced_hydrogenase
60S ribosome subunit biogenesis protein NIP7	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)	Riboflavin,_FMN_and_FAD_metabolism
6-deoxychalcone synthase	Phytoalexin_biosynthesis
6 kDa early secretory antigenic target ESAT-6 (EsxA)	ESAT-6_proteins_secretion_system_in_Actinobacteria
6-phospho-3-hexuloisomerase	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Pentose_phosphate_pathway
6-phospho-beta-galactosidase (EC 3.2.1.85)	Lactose_and_Galactose_Uptake_and_Utilization
6-phospho-beta-glucosidase ascB (EC 3.2.1.86)	Beta-Glucoside_Metabolism
6-phospho-beta-glucosidase (EC 3.2.1.86)	Beta-Glucoside_Metabolism
6-phosphofructokinase class II (EC 2.7.1.11)	Hexitol_degradation	Glycolysis_and_Gluconeogenesis	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
6-phosphofructokinase (EC 2.7.1.11)	D-Tagatose_and_Galactitol_Utilization	Hexitol_degradation	Glycolysis_and_Gluconeogenesis	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
6-phosphofructokinase, eukaryotic type (EC 2.7.1.11)	Glycolysis_and_Gluconeogenesis
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	D-gluconate_and_ketogluconates_metabolism	Sugar_utilization_in_Thermotoga	Entner-Doudoroff_Pathway	Pentose_phosphate_pathway
6-phosphogluconolactonase (EC 3.1.1.31)	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Entner-Doudoroff_Pathway	Pentose_phosphate_pathway
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	Sugar_utilization_in_Thermotoga	Entner-Doudoroff_Pathway	Pentose_phosphate_pathway
6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12)	Pterin_metabolism_3	Pterin_metabolism	Pterin_biosynthesis	Folate_Biosynthesis	Methanopterin_biosynthesis2	tRNA_modification_Archaea_Henri
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1	Coenzyme_F420_synthesis
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2	Coenzyme_F420_synthesis
8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Sphingolipid_biosynthesis	Biotin_biosynthesis
8-amino-7-oxononanoate synthase (EC 2.3.1.47) / CqsA	Quorum-sensing_in_Vibrio
AA3-600 quinol oxidase subunit I	Cytochrome_c_oxidases_d@O_copy	Terminal_cytochrome_oxidases	Terminal_AA3-600_quinol_oxidase
AA3-600 quinol oxidase subunit II	Cytochrome_c_oxidases_d@O_copy	Terminal_cytochrome_oxidases	Terminal_AA3-600_quinol_oxidase
AA3-600 quinol oxidase subunit IIII	Cytochrome_c_oxidases_d@O_copy	Terminal_cytochrome_oxidases	Terminal_AA3-600_quinol_oxidase
AA3-600 quinol oxidase subunit IV	Cytochrome_c_oxidases_d@O_copy	Terminal_cytochrome_oxidases	Terminal_AA3-600_quinol_oxidase
AAA family ATPase, ESX-1 secretion system component Rv3868	ESAT-6_proteins_secretion_system_in_Actinobacteria
ABC alpha-glucoside transporter, inner membrane subunit AglF	Periplasmic-Binding-Protein-Dependent_Transport_System_for_&#945;-Glucosides
ABC efflux pump, fused inner membrane and ATPase subunits in pyochelin gene cluster	Siderophore_pyochelin
ABC transporter ATP-binding protein SkfF	Bacillus_Sporulation_Killing_Factor_A_Biosynthetic_Cluster
ABC transporter ATP-binding protein USSDB6B	USS-DB-6
ABC transporter ATP-binding protein uup	CBSS-393121.3.peg.2760
ABC transporter, ATP-binding protein Vex2	Streptococcus_pneumoniae_Vancomycin_Tolerance_Locus
ABC transporter ATP-binding protein YvcR	Bacitracin_Stress_Response
ABC transporter in pyoverdin gene cluster, ATP-binding component	Pyoverdine_biosynthesis_new
ABC transporter in pyoverdin gene cluster, periplasmic component	Pyoverdine_biosynthesis_new
ABC transporter in pyoverdin gene cluster, permease component	Pyoverdine_biosynthesis_new
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA	Biogenesis_of_c-type_cytochromes
ABC transporter involved in cytochrome c biogenesis, CcmB subunit	Biogenesis_of_c-type_cytochromes
ABC transporter membrane-spanning permease, Pep export, Vex1	Streptococcus_pneumoniae_Vancomycin_Tolerance_Locus
ABC transporter membrane-spanning permease, Pep export, Vex3	Streptococcus_pneumoniae_Vancomycin_Tolerance_Locus
ABC transporter multidrug efflux pump, fused ATP-binding domains	ATP-dependent_efflux_pump_transporter_Ybh
ABC transporter, periplasmic spermidine putrescine-binding protein potD (TC_3.A.1.11.1)	Polyamine_Metabolism
ABC transporter, permease protein YbbP clustered with maltose/maltodextrin transporter	Maltose_and_Maltodextrin_Utilization	CBSS-261591.3.peg.3916
ABC transporter permease protein YvcS	Bacitracin_Stress_Response
ABC transporter, predicted N-acetylneuraminate-binding protein	Sialic_Acid_Metabolism
ABC transporter, predicted N-acetylneuraminate transport system permease protein 1	Sialic_Acid_Metabolism
ABC transporter, predicted N-acetylneuraminate transport system permease protein 2	Sialic_Acid_Metabolism
ABC transporter protein IroC	Salmochelin-mediated_Iron_Acquisition
ABC transporter SkfE	Bacillus_Sporulation_Killing_Factor_A_Biosynthetic_Cluster
ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing	CBSS-323850.3.peg.3284
ABC transport system, permease component YbhR	ATP-dependent_efflux_pump_transporter_Ybh
ABC transport system, permease component YbhS	ATP-dependent_efflux_pump_transporter_Ybh
ABC-type Fe3+ transport system protein	CBSS-269799.3.peg.2220
ABC-type hemin transport system, ATPase component	Hemin_transport_system
ABC-type multidrug transport system, ATPase component	CBSS-196164.1.peg.1690
ABC-type multidrug transport system, permease component	CBSS-196164.1.peg.1690
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component	Alkanesulfonate_assimilation
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component	Alkanesulfonate_assimilation
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components	Alkanesulfonate_assimilation
ABC-type polar amino acid transport system, ATPase component	CBSS-326442.4.peg.1852
ABC-type probable sulfate transporter, ATPase component	Inorganic_Sulfur_Assimilation
ABC-type probable sulfate transporter, periplasmic binding protein	Inorganic_Sulfur_Assimilation
ABC-type probable sulfate transporter, permease protein	Inorganic_Sulfur_Assimilation
ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE	Protein_secretion_by_ABC-type_exporters	CBSS-323850.3.peg.3284
ABC-type siderophore export system, fused ATPase and permease components	Pyoverdine_biosynthesis_new
ABC-type sugar transport system, periplasmic binding protein YcjN	Maltose_and_Maltodextrin_Utilization
ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C	USS-DB-6
ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A	USS-DB-6
ABC-type tungstate transport system, ATP-binding protein	ABC_transporter_tungstate_(TC_3.A.1.6.2)
ABC-type tungstate transport system, periplasmic binding protein	ABC_transporter_tungstate_(TC_3.A.1.6.2)
ABC-type tungstate transport system, permease protein	ABC_transporter_tungstate_(TC_3.A.1.6.2)
ABC-type vanadate transport system, ATP-binding protein	ABC_transporter_tungstate_(TC_3.A.1.6.2)
ABC-type vanadate transport system, periplasmic binding protein	ABC_transporter_tungstate_(TC_3.A.1.6.2)
ABC-type vanadate transport system, permease protein	ABC_transporter_tungstate_(TC_3.A.1.6.2)
Accessory cholera enterotoxin	Cholera_toxin
Accessory colonization factor AcfA	Accessory_colonization_factor
Accessory colonization factor AcfB	Accessory_colonization_factor
Accessory colonization factor AcfC	Accessory_colonization_factor
Accessory colonization factor AcfD precursor	Accessory_colonization_factor
Accessory secretory protein Asp1	SecY2-SecA2_Specialized_Transport_System
Accessory secretory protein Asp2	SecY2-SecA2_Specialized_Transport_System
Accessory secretory protein Asp3	SecY2-SecA2_Specialized_Transport_System
Accumulation-associated protein AAP	Adhesins_in_Staphylococcus	Biofilm_formation_in_Staphylococcus
Acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10)	Butanol_Biosynthesis	Ethanolamine_utilization
Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol	CBSS-232721.5.peg.360	Fermentations:_Mixed_acid	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	Fermentations:_Lactate	Biphenyl_Degradation
Acetaldehyde dehydrogenase (EC 1.2.1.10)	Cinnamic_Acid_Degradation	Fermentations:_Mixed_acid	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	Fermentations:_Lactate	Acetone_Butanol_Ethanol_Synthesis	Biphenyl_Degradation	Tryptophan_catabolism
Acetaldehyde dehydrogenase, ethanolamine utilization cluster	Fermentations:_Mixed_acid	Fermentations:_Lactate	Ethanolamine_utilization
Acetate kinase (EC 2.7.2.1)	Lysine_fermentation	Acetyl-CoA_pathway_of_CO2_fixation	CBSS-257314.1.peg.752	Fermentations:_Mixed_acid	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Fermentations:_Lactate	Threonine_anaerobic_catabolism_gene_cluster	Ethanolamine_utilization
Acetate permease ActP (cation/acetate symporter)	Protein_Acetylation_and_Deacetylation_in_Bacteria	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate
Acetate permease ActP (cation/acetate symporter) PaaL	Phenylacetyl-CoA_catabolic_pathway_(core)
Acetoacetate metabolism regulatory protein AtoC	Orphan_regulatory_proteins	Acetone_Butanol_Ethanol_Synthesis	Acetyl-CoA_fermentation_to_Butyrate
Acetoacetyl-CoA reductase (EC 1.1.1.36)	Glyoxylate_bypass	CBSS-232721.5.peg.360	Serine-glyoxylate_cycle	Acetyl-CoA_fermentation_to_Butyrate	Polyhydroxybutyrate_metabolism
Acetoacetyl-CoA synthetase (EC 6.2.1.16)	Pterin_metabolism_3	Branched_chain_amino_acid_degradation_regulons	HMG_CoA_Synthesis	Leucine_Degradation_and_HMG-CoA_Metabolism	Polyhydroxybutyrate_metabolism
Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16)	HMG_CoA_Synthesis	Leucine_Degradation_and_HMG-CoA_Metabolism
Acetoin catabolism protein X	Acetoin,_butanediol_metabolism	Dehydrogenase_complexes
Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)	Acetoin,_butanediol_metabolism	Dehydrogenase_complexes
Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)	Acetoin,_butanediol_metabolism	Dehydrogenase_complexes
Acetoin (diacetyl) reductase (EC 1.1.1.5)	Alginate_metabolism	Acetoin,_butanediol_metabolism
Acetolactate synthase, catabolic (EC 2.2.1.6)	Alpha-acetolactate_operon	Acetoin,_butanediol_metabolism	Murein_hydrolase_regulation_and_cell_death
Acetolactate synthase large subunit (EC 2.2.1.6)	Branched-Chain_Amino_Acid_Biosynthesis	Acetoin,_butanediol_metabolism
Acetolactate synthase small subunit (EC 2.2.1.6)	Branched-Chain_Amino_Acid_Biosynthesis	Acetoin,_butanediol_metabolism
Acetolactate synthase small subunit (EC 2.2.1.6), predicted	Branched-Chain_Amino_Acid_Biosynthesis	Acetoin,_butanediol_metabolism
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type	Branched-Chain_Amino_Acid_Biosynthesis	Acetoin,_butanediol_metabolism
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type 2	Branched-Chain_Amino_Acid_Biosynthesis	Acetoin,_butanediol_metabolism
Acetolactate synthase small subunit (EC 2.2.1.6), Xanthomonadales type	Branched-Chain_Amino_Acid_Biosynthesis	Acetoin,_butanediol_metabolism
Acetone carboxylase, alpha subunit (EC 6.4.1.6)	Acetone_carboxylase
Acetone carboxylase, beta subunit (EC 6.4.1.6)	Acetone_carboxylase
Acetone carboxylase, gamma subunit (EC 6.4.1.6)	Acetone_carboxylase
Acetophenone carboxylase subunit Apc1	Anaerobic_toluene_and_ethylbenzene_degradation	Acetophenone_carboxylase_1
Acetophenone carboxylase subunit Apc2	Anaerobic_toluene_and_ethylbenzene_degradation	Acetophenone_carboxylase_1
Acetophenone carboxylase subunit Apc3	Anaerobic_toluene_and_ethylbenzene_degradation	Acetophenone_carboxylase_1
Acetophenone carboxylase subunit Apc4	Anaerobic_toluene_and_ethylbenzene_degradation	Acetophenone_carboxylase_1
Acetophenone carboxylase subunit Apc5	Anaerobic_toluene_and_ethylbenzene_degradation	Acetophenone_carboxylase_1
Acetylaminoadipate kinase (EC 2.7.2.-)	Lysine_biosynthesis_AAA_pathway_2
Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8)	Acetone_Butanol_Ethanol_Synthesis	Acetyl-CoA_fermentation_to_Butyrate
Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8)	Acetone_Butanol_Ethanol_Synthesis	Acetyl-CoA_fermentation_to_Butyrate
Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Glyoxylate_bypass	Lysine_fermentation	Archaeal_lipids	Butanol_Biosynthesis	Anaerobic_benzoate_metabolism	Acetone_Butanol_Ethanol_Synthesis	Isoprenoid_Biosynthesis	MLST	Mevalonate_Branch_of_Isoprenoid_Biosynthesis	Acetyl-CoA_fermentation_to_Butyrate	Polyhydroxybutyrate_metabolism
Acetyl-CoA C-acyltransferase (EC 2.3.1.16)	Benzoate_catabolism
Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD	Glutathione_analogs:_mycothiol
Acetyl-CoA synthase	Acetyl-CoA_pathway_of_CO2_fixation
Acetyl-CoA synthase corrinoid iron-sulfur protein, large subunit	Carbon_monoxide_induced_hydrogenase
Acetyl-CoA synthase corrinoid iron-sulfur protein, small subunit	Carbon_monoxide_induced_hydrogenase
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate
Acetyl-CoA synthetase (ADP-forming) alpha chain (EC 6.2.1.13)	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate
Acetyl-CoA synthetase (ADP-forming) beta chain (EC 6.2.1.13)	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate
Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Fatty_Acid_Biosynthesis_FASII
Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	Colicin_V_and_Bacteriocin_Production_Cluster	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Fatty_Acid_Biosynthesis_FASII
Acetyl-coenzyme A synthetase (EC 6.2.1.1)	Protein_Acetylation_and_Deacetylation_in_Bacteria	Ketoisovalerate_oxidoreductase	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Methylcitrate_cycle
Acetylglutamate kinase (EC 2.7.2.8)	Arginine_Biosynthesis_extended	Arginine_Biosynthesis
Acetylornithine aminotransferase 1 (EC 2.6.1.11)	Arginine_Biosynthesis_extended
Acetylornithine aminotransferase 2 (EC 2.6.1.11)	Arginine_Biosynthesis_extended
Acetylornithine aminotransferase (EC 2.6.1.11)	Arginine_Biosynthesis_extended	Arginine_Biosynthesis
Acetylornithine aminotransferase, mitochondrial precursor (EC 2.6.1.11) (ACOAT)	Arginine_Biosynthesis_extended
Acetylornithine deacetylase (EC 3.5.1.16)	Arginine_Biosynthesis_extended	Arginine_Biosynthesis
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases	Bacterial_motility:Gliding
Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate
Acetyltransferase SypM	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Aconitate hydratase 2 (EC 4.2.1.3)	Glyoxylate_bypass	Methylcitrate_cycle	TCA_Cycle	Glyoxylate_Synthesis	Propionate-CoA_to_Succinate_Module	YgfZ
Aconitate hydratase (EC 4.2.1.3)	Biogenesis_of_c-type_cytochromes	Glyoxylate_bypass	Homogentisate_pathway_of_aromatic_compound_degradation	TCA_Cycle	Glyoxylate_Synthesis	Propionate-CoA_to_Succinate_Module	Serine-glyoxylate_cycle	YgfZ
Aconitate hydratase large subunit (EC 4.2.1.3)	TCA_Cycle
Aconitate hydratase small subunit (EC 4.2.1.3)	TCA_Cycle
Aconitate hydratase X, predicted	TCA_Cycle
Acriflavin resistance protein	Multidrug_Resistance_Efflux_Pumps
ACT domain protein	Unspecified_monosaccharide_transport_cluster
Actin-assembly inducing protein ActA precursor	Listeria_Pathogenicity_Island_LIPI-1_extended
Acting phosphoribosylanthranilate isomerase (EC 5.3.1.24)	Tryptophan_synthesis
Activator of the mannose operon (transcriptional antiterminator), BglG family	Mannose_Metabolism
Acyclic terpenes utilization regulator AtuR, TetR family	Acyclic_terpenes_utilization
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	KDO2-Lipid_A_biosynthesis
Acyl carrier protein	mycolic_acid_synthesis	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CBSS-198215.1.peg.1051	Fatty_Acid_Biosynthesis_FASII	CBSS-218491.3.peg.427
Acyl carrier protein phosphodiesterase (EC 3.1.4.14)	Fatty_Acid_Biosynthesis_FASII
Acyl-CoA dehydrogenase (EC 1.3.99.3)	CBSS-83332.1.peg.3803
Acyl-CoA hydrolase (EC 3.1.2.20)	CBSS-176280.1.peg.1561
Acyl-CoA reductase (EC 1.2.1.50)	Biolumenescence
Acyl-CoA thioesterase II (EC 3.1.2.-)	CBSS-1806.1.peg.1285
Acyl-CoA thioesterase YciA, involved in membrane biogenesis	Intracellular_septation_in_Enterobacteria
Acyl coenzyme A dehydrogenase, BldA, contributes to the proper timing of aerial mycelium formation and antibiotic production	2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone_and_other_bacterial_morphogens
Acyl coenzyme A dehydrogenase (EC 1.3.99.13)	Phenylpropanoid_compound_degradation
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	CBSS-218491.3.peg.427
Acyl dehydratase	CBSS-246196.1.peg.364
Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching	Pyoverdine_biosynthesis_new
Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria
Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate
Acyl transferase (EC 2.3.1.-)	Biolumenescence
Acyltransferase (EC 2.3.1.-)	CBSS-218491.3.peg.427
ADA regulatory protein	DNA_repair,_bacterial	CBSS-393124.3.peg.2657
Additional component NikL of nickel ECF transporter	Transport_of_Nickel_and_Cobalt
Additional lipoprotein component of predicted cobalamin ECF transporter	Coenzyme_B12_biosynthesis
Additional periplasmic component NikK of nickel ECF transporter	Transport_of_Nickel_and_Cobalt
Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	Thiamin_biosynthesis
Additional substrate-specific component CbiN of cobalt ECF transporter	ECF_class_transporters	Transport_of_Nickel_and_Cobalt
Additional substrate-specific component NikN of nickel ECF transporter	ECF_class_transporters	Transport_of_Nickel_and_Cobalt
Adenine deaminase (EC 3.5.4.2)	Purine_conversions
Adenine phosphoribosyltransferase (EC 2.4.2.7)	Stringent_Response,_(p)ppGpp_metabolism	cAMP_signaling_in_bacteria	Purine_conversions
Adenine-specific methyltransferase (EC 2.1.1.72)	CBSS-257314.1.peg.752
Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	CBSS-224911.1.peg.435	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Adenosine deaminase (EC 3.5.4.4)	Menaquinone_Biosynthesis_via_Futalosine	Purine_conversions
Adenosine kinase (EC 2.7.1.20)	Purine_conversions
Adenosylcobinamide amidohydrolase (EC 3.5.1.90)	Coenzyme_B12_biosynthesis
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Adenosylcobinamide-phosphate synthase	Cobalamin_synthesis	YgfZ	Coenzyme_B12_biosynthesis
Adenosylhomocysteinase (EC 3.3.1.1)	Methionine_Degradation	Methionine_Biosynthesis
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	Biotin_biosynthesis
Adenylate cyclase	CBSS-222523.1.peg.1311
Adenylate cyclase (EC 4.6.1.1)	cAMP_signaling_in_bacteria
adenylate cyclase ExoY	cAMP_signaling_in_bacteria
Adenylate/guanylate cyclase (EC 4.6.1.2)	cAMP_signaling_in_bacteria
Adenylate kinase (EC 2.7.4.3)	Purine_conversions
Adenylosuccinate lyase (EC 4.3.2.2)	Purine_conversions	CBSS-354.1.peg.876	De_Novo_Purine_Biosynthesis
Adenylosuccinate synthetase (EC 6.3.4.4)	CBSS-262719.3.peg.410	SA:14-24	Purine_conversions	Histidine_Biosynthesis
Adenylylsulfate kinase (EC 2.7.1.25)	Cysteine_Biosynthesis	O-Methyl_Phosphoramidate_Capsule_Modification_in_Campylobacter	Inorganic_Sulfur_Assimilation	Sulfate_assimilation
Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)	Anaerobic_respiratory_reductases	Inorganic_Sulfur_Assimilation
Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)	Anaerobic_respiratory_reductases	Inorganic_Sulfur_Assimilation
Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)	Inorganic_Sulfur_Assimilation
Adhesin of unknown specificity SdrC	Adhesins_in_Staphylococcus
Adhesin of unknown specificity SdrD	Adhesins_in_Staphylococcus
Adhesin of unknown specificity SdrE, similar to bone sialoprotein-binding protein Bbp	Adhesins_in_Staphylococcus
ADP compounds hydrolase NudE (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
ADP-dependent glucokinase (EC 2.7.1.147)	AMP_to_3-phosphoglycerate	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
ADP-dependent phosphofructokinase (EC 2.7.1.146)	AMP_to_3-phosphoglycerate	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	Vibrio_Core_Oligosaccharide_Biosynthesis	LOS_core_oligosaccharide_biosynthesis
ADP-heptose--lipooligosaccharide heptosyltransferase, putative	Vibrio_Core_Oligosaccharide_Biosynthesis
ADP-heptose synthase (EC 2.7.-.-)	LOS_core_oligosaccharide_biosynthesis
ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)	Vibrio_Core_Oligosaccharide_Biosynthesis	LOS_core_oligosaccharide_biosynthesis
ADP-ribose 1'',2''-cyclic phosphate phophodiesterase	tRNA_splicing
ADP-ribose 1"-phosphate phophatase	tRNA_splicing
ADP-ribose pyrophosphatase (EC 3.6.1.13)	CBSS-342610.3.peg.1794	NAD_and_NADP_cofactor_biosynthesis_global	CBSS-216591.1.peg.168	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
ADP-ribose pyrophosphatase, mitochondrial precursor (EC 3.6.1.13)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Aerobactin siderophore biosynthesis protein IucA	Aerobactin_siderophore_biosynthesis	CBSS-243265.1.peg.4415	Iron_acquisition_in_Vibrio
Aerobactin siderophore biosynthesis protein IucB	Aerobactin_siderophore_biosynthesis	CBSS-243265.1.peg.4415	Iron_acquisition_in_Vibrio
Aerobactin siderophore biosynthesis protein IucC	Aerobactin_siderophore_biosynthesis	CBSS-243265.1.peg.4415	Iron_acquisition_in_Vibrio
Aerobactin siderophore biosynthesis protein iucD	Aerobactin_siderophore_biosynthesis	Iron_acquisition_in_Vibrio
Aerobactin siderophore receptor IutA	Aerobactin_siderophore_biosynthesis	Ton_and_Tol_transport_systems	Iron_acquisition_in_Vibrio
Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Aerobic cobaltochelatase cobS subunit (EC 6.6.1.2)	Conenzyme_B12_related_Hypothetical:_Clusters_with_cobST	Coenzyme_B12_biosynthesis
Aerobic cobaltochelatase cobT subunit (EC 6.6.1.2)	Conenzyme_B12_related_Hypothetical:_Clusters_with_cobST	Coenzyme_B12_biosynthesis
Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	Respiratory_dehydrogenases_1	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Aerobic respiration control protein arcA	Orphan_regulatory_proteins	Regulation_of_Oxidative_Stress_Response
Aerobic respiration control sensor protein arcB (EC 2.7.3.-)	Orphan_regulatory_proteins	Regulation_of_Oxidative_Stress_Response
Aerotaxis sensor receptor protein	Bacterial_Chemotaxis
(AF179595) Vco33	CBSS-1085.1.peg.1363
A-factor biosynthesis protein AfsA	2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone_and_other_bacterial_morphogens
Agglutination protein	CBSS-323850.3.peg.3284
Aggregation substance Asa1/PrgB	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Agmatinase (EC 3.5.3.11)	Polyamine_Metabolism	Arginine_and_Ornithine_Degradation
Agmatine deiminase (EC 3.5.3.12)	Polyamine_Metabolism	Arginine_and_Ornithine_Degradation
Agmatine/putrescine antiporter, associated with agmatine catabolism	Polyamine_Metabolism
Agropine transporter ATP-binding protein AgtA	Agrobacterium_opine_transport
Agropine transporter periplasmic substrate-binding protein AgtB	Agrobacterium_opine_transport
Agropine transporter permease protein AgtC	Agrobacterium_opine_transport
Agropine transporter permease protein AgtD	Agrobacterium_opine_transport
Agropinic acid transporter ATP-binding protein AgaD	Agrobacterium_opine_transport
Agropinic acid transporter periplasmic substrate-binding protein AgaA	Agrobacterium_opine_transport
Agropinic acid transporter permease protein AgaB	Agrobacterium_opine_transport
Agropinic acid transporter permease protein AgaC	Agrobacterium_opine_transport
A/G-specific adenine glycosylase (EC 3.2.2.-)	CBSS-176280.1.peg.1561	CBSS-261594.1.peg.788	DNA_repair,_bacterial
A heat shock protein involved in translation, predicted protease	CBSS-56780.10.peg.1536
Alanine-anticapsin ligase BacD	Bacilysin_biosynthesis
Alanine dehydrogenase (EC 1.4.1.1)	Pyruvate_Alanine_Serine_Interconversions	CBSS-269801.1.peg.809
Alanine racemase, biosynthetic (EC 5.1.1.1)	Pyruvate_Alanine_Serine_Interconversions	Alanine_biosynthesis
Alanine racemase, catabolic (EC 5.1.1.1)	Pyruvate_Alanine_Serine_Interconversions	Alanine_biosynthesis
Alanine racemase (EC 5.1.1.1)	Pyruvate_Alanine_Serine_Interconversions	Alanine_biosynthesis
Alanyl-tRNA synthetase (EC 6.1.1.7)	tRNA_aminoacylation	CBSS-281090.3.peg.464	CBSS-257314.1.peg.488
Alanyl-tRNA synthetase (EC 6.1.1.7), mitochondrial	tRNA_aminoacylation,_mitochondrial
Alcaligin biosynthesis complex, large chain	CBSS-243265.1.peg.4415
Alcaligin biosynthesis complex, long chain	CBSS-243265.1.peg.4415
Alcaligin biosynthesis complex, short chain	CBSS-243265.1.peg.4415
Alcaligin biosynthesis enzyme (EC 1.-.-.-)	CBSS-243265.1.peg.4415
Alcohol dehydrogenase (EC 1.1.1.1)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Staphylococcus_aureus_hypothetical_repetitive_gene_loci	Fermentations:_Mixed_acid	Fermentations:_Lactate	Acetone_Butanol_Ethanol_Synthesis
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	Butanol_Biosynthesis
Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1)	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Alcohol sulfotransferase (EC 2.8.2.2)	Steroid_sulfates
Aldehyde dehydrogenase 2B4, mitochondrial precursor (EC 1.2.1.3) (ALDH2a)	Methylglyoxal_Metabolism
Aldehyde dehydrogenase A (EC 1.2.1.22)	Methylglyoxal_Metabolism	Glycolate,_glyoxylate_interconversions
Aldehyde dehydrogenase B (EC 1.2.1.22)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Methylglyoxal_Metabolism
Aldehyde dehydrogenase (EC 1.2.1.3)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Methylglyoxal_Metabolism	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Entner-Doudoroff_Pathway
Aldehyde dehydrogenase (EC 1.2.1.3) in 4-hydroxyproline catabolic gene cluster	Proline,_4-hydroxyproline_uptake_and_utilization
Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	Phenylacetyl-CoA_catabolic_pathway_(core)	Aromatic_Amin_Catabolism
Aldehyde dehydrogenase in hypothetical Actinobacterial gene cluster	CBSS-262316.1.peg.2929
Aldehyde dehydrogenase in Methylamine utilization cluster	CBSS-265072.7.peg.546
Aldehyde dehydrogenase, mitochondrial precursor (EC 1.2.1.3)	Methylglyoxal_Metabolism
Aldo-keto reductase family 1 member B10 (EC 1.1.1.-)	Pterin_biosynthesis
Aldo-keto reductase family 1, member C3 (EC 1.1.1.-)	Pterin_biosynthesis
Aldolase YihT	O-antigen_capsule_important_for_environmental_persistence
Aldose 1-epimerase (EC 5.1.3.3)	Lactose_and_Galactose_Uptake_and_Utilization	Maltose_and_Maltodextrin_Utilization	Entner-Doudoroff_Pathway
Aldose 1-epimerase family protein YeaD	Unknown_carbohydrate_utilization_(_cluster_Ydj_)
Aldose 1-epimerase family protein YphB	Unknown_sugar_utilization_(cluster_yphABCDEFG)
Aldose-ketose isomerase YihS	O-antigen_capsule_important_for_environmental_persistence
Alfa-L-rhamnosidase (EC 3.2.1.40) in L-rhamnose subsystem	L-rhamnose_utilization
Alginate biosynthesis protein Alg8	Alginate_metabolism
alginate biosynthesis protein AlgJ	Alginate_metabolism
Alginate biosynthesis protein AlgX	Alginate_metabolism
Alginate biosynthesis transcriptional activator	Alginate_metabolism
Alginate lyase (EC 4.2.2.3)	Alginate_metabolism
Alginate lyase precursor (EC 4.2.2.3)	D-Galacturonate_Utilization	Alginate_metabolism	D-Galacturonate_and_D-Glucuronate_Utilization
alginate o-acetyltransferase AlgF	Alginate_metabolism
Alkaline phosphatase (EC 3.1.3.1)	P_uptake_(cyanobacteria)	Phosphate_metabolism
Alkaline phosphatase isozyme conversion protein precursor (EC 3.4.11.-)	CBSS-216592.1.peg.3534
Alkaline phosphatase like protein	Phosphate_metabolism
Alkaline phosphatase synthesis transcriptional regulatory protein	Phosphate_metabolism
Alkanal monooxygenase alpha chain (EC 1.14.14.3)	Biolumenescence
Alkanal monooxygenase beta chain (EC 1.14.14.3)	Biolumenescence
Alkanesulfonate monooxygenase (EC 1.14.14.5)	Alkanesulfonate_assimilation	Alkanesulfonates_Utilization
Alkanesulfonates ABC transporter ATP-binding protein	Alkanesulfonate_assimilation	Alkanesulfonates_Utilization
Alkanesulfonates-binding protein	Putative_sulfate_assimilation_cluster	Alkanesulfonate_assimilation	Alkanesulfonates_Utilization
Alkanesulfonates transport system permease protein	Alkanesulfonate_assimilation	Alkanesulfonates_Utilization
Alkanesulfonate utilization operon LysR-family regulator CbI	DNA-binding_regulatory_proteins,_strays
Alkylated DNA repair protein AlkB	DNA_repair,_bacterial
Alkylhydroperoxidase protein D	Thioredoxin-disulfide_reductase
Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Thioredoxin-disulfide_reductase
Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Thioredoxin-disulfide_reductase
Alkyl hydroperoxide reductase subunit C-like protein	Thioredoxin-disulfide_reductase	Rubrerythrin	Oxidative_stress
Alkylphosphonate utilization operon protein PhnA	Alkylphosphonate_utilization
All3116 protein	CBSS-84588.1.peg.1247
Allantoate amidohydrolase (EC 3.5.3.9)	Allantoin_degradation	Allantoin_Utilization
Allantoicase (EC 3.5.3.4)	Allantoin_degradation	Allantoin_Utilization
Allantoinase (EC 3.5.2.5)	Hydantoin_metabolism	Allantoin_degradation	Allantoin_Utilization
Allantoin permease	Purine_Utilization	Allantoin_Utilization
Allene-oxide cyclase	Octadecanoids
Allene oxide synthase, chloroplast precursor (EC 4.2.1.92)	Octadecanoids
Allophanate hydrolase	Urea_decomposition
Allophanate hydrolase subunit 1 (EC 3.5.1.54)	EC699-706
Allophanate hydrolase subunit 2 (EC 3.5.1.54)	EC699-706
Allophycocyanin alpha chain	Phycobilisome
Allophycocyanin-B	Phycobilisome
Allophycocyanin beta chain	Phycobilisome
Alpha-1,2-mannosidase	Mannose_Metabolism
Alpha-1,3-N-acetylgalactosamine transferase PglA (EC 2.4.1.-)	CBSS-296591.1.peg.2330	N-linked_Glycosylation_in_Bacteria
alpha-1,3-rhamnosyltransferase	Core_Oligosaccharide_Glycosylation_in_Pseudomonas
Alpha-1,4-N-acetylgalactosamine transferase PglH (EC 2.4.1.-)	CBSS-376686.6.peg.291	N-linked_Glycosylation_in_Bacteria	C_jejuni_colonization_of_chick_caeca
Alpha-1,4-N-acetylgalactosamine transferase PglJ (EC 2.4.1.-)	N-linked_Glycosylation_in_Bacteria
alpha-1,6-rhamnosyltransferase	Core_Oligosaccharide_Glycosylation_in_Pseudomonas
alpha-1,6-rhamnosyltransferase paralog	Core_Oligosaccharide_Glycosylation_in_Pseudomonas
Alpha-1-peptidase inhibitor, protease inhibitor I04.001	Coagulation_cascade
Alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal precursor	CBSS-316273.3.peg.227
Alpha-2-macroglobulin, protease inhibitor I39.001	Coagulation_cascade
Alpha-acetolactate decarboxylase (EC 4.1.1.5)	Alpha-acetolactate_operon	Acetoin,_butanediol_metabolism	Murein_hydrolase_regulation_and_cell_death
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15)	Trehalose_Biosynthesis
Alpha-aminoadipate aminotransferase (EC 2.6.1.39)	Lysine_biosynthesis_AAA_pathway_2
alpha-amylase (EC 3.2.1.1)	Sucrose_Metabolism
Alpha-amylase (EC 3.2.1.1)	Maltose_and_Maltodextrin_Utilization	Glycogen_metabolism	Trehalose_Biosynthesis
Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)	Cellulosome
Alpha-amylase SusG (EC 3.2.1.1)	Cellulosome
alpha-arabinosides ABC transport system, permease protein araP	L-Arabinose_utilization
alpha-arabinosides ABC transport system, permease protein araQ	L-Arabinose_utilization
alpha-arabinosides ABC transport system, substrate-binding protein araN	L-Arabinose_utilization
Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21)	Protein_degradation
Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-)	Rhamnose_containing_glycans
Alpha-fimbriae chaperone protein	&#945;-Fimbriae
Alpha-fimbriae major subunit	&#945;-Fimbriae
Alpha-fimbriae tip adhesin	&#945;-Fimbriae
Alpha-fimbriae usher protein	&#945;-Fimbriae
Alpha-galactosidase (EC 3.2.1.22)	Galactosylceramide_and_Sulfatide_metabolism	Melibiose_Utilization	Fructooligosaccharides(FOS)_and_Raffinose_Utilization
Alpha-galactosidase precursor (EC 3.2.1.22)	Galactosylceramide_and_Sulfatide_metabolism
Alpha-glucosidase AglA	Periplasmic-Binding-Protein-Dependent_Transport_System_for_&#945;-Glucosides
Alpha-glucosidase (EC 3.2.1.20)	Maltose_and_Maltodextrin_Utilization
Alpha-glucosidase, family 31 of glycosyl hydrolases, COG1501	Glycogen_metabolism
Alpha-glucosidase SusB (EC 3.2.1.20)	Cellulosome
Alpha-glucosides-binding periplasmic protein AglE precursor	Periplasmic-Binding-Protein-Dependent_Transport_System_for_&#945;-Glucosides
Alpha-glucoside transport ATP-binding protein AglK	Periplasmic-Binding-Protein-Dependent_Transport_System_for_&#945;-Glucosides
Alpha-glucoside transport system permease protein AglG	Periplasmic-Binding-Protein-Dependent_Transport_System_for_&#945;-Glucosides
Alpha-glucosyltransferase YihQ	O-antigen_capsule_important_for_environmental_persistence
Alpha-glycerophosphate oxidase (EC 1.1.3.21)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Alpha-hemolysin precursor	Staphylococcus_Two-component_and_Pore-forming_Cytolysins
Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)	Taurine_Utilization	Alkanesulfonate_assimilation
Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55)	L-Arabinose_utilization
Alpha-L-fucosidase (EC 3.2.1.51)	L-fucose_utilization	L-fucose_utilization_temp
Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L- rhamnosyltransferase (EC 2.4.1.-)	Rhamnose_containing_glycans
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-)	Rhamnose_containing_glycans
Alpha-mannosidase (EC 3.2.1.24)	Fructooligosaccharides(FOS)_and_Raffinose_Utilization
Alpha-N-acetylglucosaminidase (EC 3.2.1.50)	Chitin_and_N-acetylglucosamine_utilization
Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55)	L-Arabinose_utilization
Alpha-N-arabinofuranosidase (EC 3.2.1.55)	L-Arabinose_utilization
Alpha-related fimbriae chaperone 1	&#945;-related_Fimbriae_in_Yersinia
Alpha-related fimbriae chaperone 2	&#945;-related_Fimbriae_in_Yersinia
Alpha-related fimbriae major subunit	&#945;-related_Fimbriae_in_Yersinia
Alpha-related fimbriae minor subunit 1	&#945;-related_Fimbriae_in_Yersinia
Alpha-related fimbriae minor subunit 2	&#945;-related_Fimbriae_in_Yersinia
Alpha-related fimbriae usher protein	&#945;-related_Fimbriae_in_Yersinia
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	Cobalamin_synthesis	CBSS-216591.1.peg.168	Coenzyme_B12_biosynthesis
Alpha-xylosidase (EC 3.2.1.-)	Sugar_utilization_in_Thermotogales	Xylose_utilization
alternate gene name: yzbB	Folate_Biosynthesis
Alternative cytochrome c oxidase polypeptide CoxM (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Alternative cytochrome c oxidase polypeptide CoxN (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Alternative cytochrome c oxidase polypeptide CoxO (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Alternative cytochrome c oxidase polypeptide CoxP (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Alternative dihydrofolate reductase 2	Folate_Biosynthesis	5-FCL-like_protein
Alternative dihydrofolate reductase 3	Folate_Biosynthesis
Alternative Folylglutamate Synthase	Folate_Biosynthesis
alternative photosystem I reaction center subunit X (PsaK2)	Photosystem_I
alternative Ribulokinase (EC 2.7.1.16)	Sugar_utilization_in_Thermotogales	L-ascorbate_utilization_(and_related_gene_clusters)	L-Arabinose_utilization
Altronate hydrolase (EC 4.2.1.7)	D-Galacturonate_Utilization	D-Galacturonate_and_D-Glucuronate_Utilization	Entner-Doudoroff_Pathway
Altronate oxidoreductase (EC 1.1.1.58)	D-Galacturonate_Utilization	D-Galacturonate_and_D-Glucuronate_Utilization
Amidase clustered with urea ABC transporter and nitrile hydratase functions	Amidase_clustered_with_urea_and_nitrile_hydratase_functions
Amide synthase component of siderophore synthetase	Iron_acquisition_in_Vibrio
Amidophosphoribosyltransferase (EC 2.4.2.14)	Colicin_V_and_Bacteriocin_Production_Cluster	YgfZ	De_Novo_Purine_Biosynthesis
Amiloride-sensitive amine oxidase [copper-containing] precursor (EC 1.4.3.6)	Aromatic_Amin_Catabolism	Threonine_degradation
Amino-acid ABC transporter ATP-binding protein PebC	Adhesion_of_Campylobacter
Amino acid-binding ACT	Aromatic_amino_acid_interconversions_with_aryl_acids
Amino acid/metabolite permease in hypothetical Actinobacterial gene cluster	CBSS-262316.1.peg.2929
Amino acid permease in 4-hydroxyproline catabolic gene cluster	Proline,_4-hydroxyproline_uptake_and_utilization
Amino acid permease in hypothetical Actinobacterial gene cluster	CBSS-262316.1.peg.2929
Amino acid regulated cytosolic protein	CBSS-235.1.peg.567
Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	Recycling_of_Peptidoglycan_Amino_Acids	Protein_degradation
Aminobenzoyl-glutamate transport protein	Folate_transporters	p-Aminobenzoyl-Glutamate_Utilization
Aminodeoxychorismate lyase (EC 4.1.3.38)	Tryptophan_synthesis	CBSS-198215.1.peg.1051	Folate_Biosynthesis	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
Aminoglycoside N6'-acetyltransferase (EC 2.3.1.82)	Aminoglycoside_adenylyltransferases
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	Glycine_cleavage_system	CBSS-87626.3.peg.3639	Photorespiration_(oxidative_C2_cycle)	YgfZ	Glycine_and_Serine_Utilization
Aminomethyl transferase, THF-dependent (glycine cleavage system T protein) (EC 2.1.2.10), mitochondrial	Photorespiration_(oxidative_C2_cycle)
Aminopeptidase C (EC 3.4.22.40)	Protein_degradation
Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.-)	CBSS-176280.1.peg.1561	Protein_degradation
Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.-)	Protein_degradation
Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	Protein_degradation
Amino terminal CAAX family protease SkfD	Bacillus_Sporulation_Killing_Factor_A_Biosynthetic_Cluster
Amino-terminal intein-mediated trans-splice	Inteins
Aminotransferase, anthrose biosynthesis	Anthrose_Biosynthesis
Aminotransferase involved in DMSP breakdown	DMSP_breakdown
Aminotransferase ScrA	Control_of_Swarming_in_Vibrio_and_Shewanella_species	CBSS-84588.1.peg.1247
ammonium/methylammonium permease	Ammonia_assimilation
Ammonium transporter	Ammonia_assimilation
Ammonium transporter family	Ammonia_assimilation
AmpG permease	Recycling_of_Peptidoglycan_Amino_Acids
AMP nucleosidase (EC 3.2.2.4)	Purine_conversions
AMP phosphohydrolase	AMP_to_3-phosphoglycerate
Anaerobic C4-dicarboxylate transporter dcuC	Citrate_Metabolism,_Transport,_and_Regulation
Anaerobic dehydrogenases, typically selenocysteine-containing	Anaerobic_respiratory_reductases
Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)	Anaerobic_respiratory_reductases
Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)	Anaerobic_respiratory_reductases	YgfZ
Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)	Anaerobic_respiratory_reductases
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)	Respiratory_dehydrogenases_1	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.99.5)	Respiratory_dehydrogenases_1	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Anaerobic nitric oxide reductase flavorubredoxin	Flavohaemoglobin	Nitrosative_stress
Anaerobic sulfite reductase subunit A	Flavohaemoglobin	Anaerobic_respiratory_reductases
Anaerobic sulfite reductase subunit B	Flavohaemoglobin	Anaerobic_respiratory_reductases
Anaerobic sulfite reductase subunit C (EC 1.8.1.-)	Anaerobic_respiratory_reductases
Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-)	Recycling_of_Peptidoglycan_Amino_Sugars
Anthranilate dioxygenase large subunit	Aromatic_amino_acid_degradation
Anthranilate dioxygenase reductase	Aromatic_amino_acid_degradation
Anthranilate dioxygenase small subunit	Aromatic_amino_acid_degradation
Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	Tryptophan_synthesis	Auxin_biosynthesis
Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	Tryptophan_synthesis	Pseudomonas_quinolone_signal_PQS	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
Anthranilate synthase, aminase component (EC 4.1.3.27)	Tryptophan_synthesis	Pseudomonas_quinolone_signal_PQS	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
anthrax toxin moiety, protective antigen, pagA formerly pag, plasmid pXO1, B. anthracis (M22589, P13423)	cAMP_signaling_in_bacteria
Antiadhesin Pls, binding to squamous nasal epithelial cells	Adhesins_in_Staphylococcus	Biofilm_formation_in_Staphylococcus
Anti anti-sigma regulatory factor SypA	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Antibiotic biosynthesis monooxygenase	CBSS-1085.1.peg.1363
Anti-cleavage anti-GreA transcription factor Gfh1	Transcription_factors_bacterial
Antigen 85-A precursor (85A) (Antigen 85 complex A) (Ag85A) (Mycolyl transferase 85A) (EC 2.3.1.-)	CBSS-83332.1.peg.3803
Antiholin-like protein LrgA	Murein_hydrolase_regulation_and_cell_death
Antimicrobial protein SkfB	Bacillus_Sporulation_Killing_Factor_A_Biosynthetic_Cluster
Antimicrobial protein SkfC	Bacillus_Sporulation_Killing_Factor_A_Biosynthetic_Cluster
Antiphagocytic M protein	Streptococcal_Mga_Regulon	Streptococcus_pyogenes_Virulome
Antirepressor [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Antirepressor [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
anti sigma b factor antagonist RsbV	SigmaB_stress_responce_regulation
anti-sigma B factor RsbT	SigmaB_stress_responce_regulation
Antisigma transmembrane sensor FpvR	Pyoverdine_biosynthesis_new
Antithrombin III, protease inhibitor I04.018	Coagulation_cascade
ApaG protein	EC49-61
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)	Citrate_Metabolism,_Transport,_and_Regulation
Apolipoprotein N-acyltransferase (EC 2.3.1.-)	CBSS-376686.6.peg.291	Lipoprotein_Biosynthesis	Phosphate_metabolism
Aquaporin (Major Intrinsic Protein Family)	Beta-lactamase_cluster_in_Streptococcus
Aquaporin Z	Osmoregulation
Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)	L-Arabinose_utilization
Arabinose 5-phosphate isomerase (EC 5.3.1.13)	KDO2-Lipid_A_biosynthesis
Arabinose operon protein araL	L-Arabinose_utilization
Arabinose operon protein araM	L-Arabinose_utilization
Arabinose operon regulatory protein	L-Arabinose_utilization
Arabinose-proton symporter	L-Arabinose_utilization
Arabinose-regulated TonB-dependent outer membrane receptor	L-Arabinose_utilization
archaeal ATPase, fused to C-terminal DUF234 domain	tRNA_modification_Archaea
Archaeal DNA polymerase I (EC 2.7.7.7)	DNA_replication,_archaeal
Archaeal DNA polymerase II large subunit (EC 2.7.7.7)	DNA_replication,_archaeal
Archaeal DNA polymerase II small subunit (EC 2.7.7.7)	DNA_replication,_archaeal
Archaeal S-adenosylmethionine synthetase (EC 2.5.1.6)	Methionine_Biosynthesis
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	TCA_Cycle
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	TCA_Cycle
Archaeal transcription factor E	RNA_polymerase_archaeal_initiation_factors
Archaeal-type H+-ATPase subunit H	V-Type_ATP_synthase
Archaeosine cluster gene X	Queuosine-Archaeosine_Biosynthesis	tRNA_modification_Archaea_Henri
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) PUA domain	tRNA_modification_Archaea	Queuosine-Archaeosine_Biosynthesis	tRNA_modification_Archaea_Henri
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 1	tRNA_modification_Archaea	Queuosine-Archaeosine_Biosynthesis	tRNA_modification_Archaea_Henri
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 2	tRNA_modification_Archaea	Queuosine-Archaeosine_Biosynthesis	tRNA_modification_Archaea_Henri
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 5	Queuosine-Archaeosine_Biosynthesis
Archease	Archease	tRNA_modification_Archaea	tRNA_modification_Archaea_Henri	Archease2
AreA (Esterase for aryl ester catabolic pathway) (EC 3.1.1.-)	Salicylate_and_gentisate_catabolism	Salicylate_ester_degradation
AreB (Aryl-alcohol dehydrogenase) (EC 1.1.1.90)	Salicylate_and_gentisate_catabolism	Salicylate_ester_degradation
Arginase (EC 3.5.3.1)	CBSS-261591.3.peg.3916	Arginine_and_Ornithine_Degradation
Arginine ABC transporter, ATP-binding protein ArtP	Arginine_and_Ornithine_Degradation
Arginine ABC transporter, periplasmic arginine-binding protein ArtI	Arginine_and_Ornithine_Degradation
Arginine ABC transporter, periplasmic arginine-binding protein ArtJ	Arginine_and_Ornithine_Degradation
Arginine ABC transporter, permease protein ArtM	Arginine_and_Ornithine_Degradation
Arginine ABC transporter, permease protein ArtQ	Arginine_and_Ornithine_Degradation
Arginine/agmatine antiporter	Acid_resistance_mechanisms	Polyamine_Metabolism	Arginine_and_Ornithine_Degradation
Arginine decarboxylase, catabolic (EC 4.1.1.19)	Acid_resistance_mechanisms	Polyamine_Metabolism	Arginine_and_Ornithine_Degradation
Arginine decarboxylase (EC 4.1.1.19)	Acid_resistance_mechanisms	Polyamine_Metabolism	Arginine_and_Ornithine_Degradation
Arginine decarboxylase (EC 4.1.1.19) / Lysine decarboxylase (EC 4.1.1.18)	CBSS-393133.3.peg.2787
Arginine deiminase (EC 3.5.3.6)	Arginine_Deiminase_Pathway	Arginine_and_Ornithine_Degradation
Arginine exporter protein ArgO	CBSS-316407.3.peg.2816
Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109)	Arginine_and_Ornithine_Degradation
Arginine N-succinyltransferase, beta subunit (EC 2.3.1.109)	Arginine_and_Ornithine_Degradation
Arginine N-succinyltransferase (EC 2.3.1.109)	Arginine_and_Ornithine_Degradation
Arginine/ornithine ABC transporter, ATP-binding protein AotP	Arginine_and_Ornithine_Degradation
Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein	Arginine_and_Ornithine_Degradation
Arginine/ornithine ABC transporter, permease protein AotM	Arginine_and_Ornithine_Degradation
Arginine/ornithine ABC transporter, permease protein AotQ	Arginine_and_Ornithine_Degradation
Arginine/ornithine antiporter	Polyamine_Metabolism
Arginine/ornithine antiporter ArcD	Arginine_Deiminase_Pathway	Polyamine_Metabolism	Arginine_and_Ornithine_Degradation
Arginine pathway regulatory protein ArgR, repressor of arg regulon	Arginine_Biosynthesis_extended	Arginine_Deiminase_Pathway	Arginine_and_Ornithine_Degradation
Arginine permease RocE	Arginine_and_Ornithine_Degradation
Arginine-tRNA-protein transferase (EC 2.3.2.8)	Protein_degradation
Arginine utilization protein RocB	Arginine_and_Ornithine_Degradation
Arginine utilization regulatory protein RocR	Arginine_and_Ornithine_Degradation
Argininosuccinate lyase (EC 4.3.2.1)	Arginine_Biosynthesis_extended	Arginine_Biosynthesis
Argininosuccinate synthase (EC 6.3.4.5)	Arginine_Biosynthesis_extended	Arginine_Biosynthesis
Arginyl-tRNA synthetase (EC 6.1.1.19)	tRNA_aminoacylation
Arginyl-tRNA synthetase (EC 6.1.1.19), mitochondrial	tRNA_aminoacylation,_mitochondrial
Arogenate dehydratase (EC 4.2.1.91)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate
Arogenate dehydrogenase (EC 1.3.1.43)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate_Synthesis
Aromatic-amino-acid aminotransferase (EC 2.6.1.57)	Pterin_metabolism_3	Aminotransferases:Aromatic_Pathway_and_More,_A_work_in_progress	Pterin_carbinolamine_dehydratase	Homogentisate_pathway_of_aromatic_compound_degradation	Phenylalanine_synthesis
Aromatic amino acid aminotransferase gamma (EC 2.6.1.57)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate
Aromatic amino acid transport protein aroP	Aromatic_amino_acid_degradation
Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family)	DNA-binding_regulatory_proteins,_strays	CBSS-232721.5.peg.360	Benzoate_degradation
Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28)	Aromatic_amino_acid_degradation	Auxin_biosynthesis
Aromatic ring-opening dioxygenase	Aromatic_amino_acid_degradation
AroM protein	CBSS-562.2.peg.5158_SK3_including
Arrested fork binding	DNA-replication
Arsenate reductase (EC 1.20.4.1)	Anaerobic_respiratory_reductases	Arsenic_resistance
Arsenical pump-driving ATPase (EC 3.6.3.16)	cAMP_signaling_in_bacteria	Arsenic_resistance
Arsenical resistance operon repressor	Arsenic_resistance
Arsenical resistance operon trans-acting repressor ArsD	Arsenic_resistance
Arsenical-resistance protein ACR3	Arsenic_resistance
Arsenic efflux pump protein	Arsenic_resistance
Arsenic resistance protein ArsH	Arsenic_resistance
Arylsulfatase B precursor (EC 3.1.6.12)	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Arylsulfatase (EC 3.1.6.1)	Galactosylceramide_and_Sulfatide_metabolism	Sulfatases_and_sulfatase_modifying_factor_1	Alkanesulfonate_assimilation	Steroid_sulfates
AscBF operon repressor	Beta-Glucoside_Metabolism
Asparagine-rich ORFan next to Sag operon	Streptolysin_S_Biosynthesis_and_Transport
Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	Cyanophycin_Metabolism	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis
Asparagine--tRNA ligase related protein	tRNA_modification_Archaea
Asparaginyl-tRNA synthetase (EC 6.1.1.22)	tRNA_aminoacylation	Asp-tRNA(Asn)_transamidation	tRNA_modification_Archaea	Glu-tRNA(Gln)_transamidation
Asparaginyl-tRNA synthetase (EC 6.1.1.22), mitochondrial	tRNA_aminoacylation,_mitochondrial
Aspartate 1-decarboxylase (EC 4.1.1.11)	Coenzyme_A_Biosynthesis
Aspartate aminotransferase (EC 2.6.1.1)	Proline,_4-hydroxyproline_uptake_and_utilization	Aminotransferases:Aromatic_Pathway_and_More,_A_work_in_progress	CBSS-216591.1.peg.168	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Threonine_and_Homoserine_Biosynthesis	Phenylalanine_synthesis
Aspartate--ammonia ligase (EC 6.3.1.1)	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis
Aspartate ammonia-lyase (EC 4.3.1.1)	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis
Aspartate carbamoyltransferase (EC 2.1.3.2)	De_Novo_Pyrimidine_Synthesis	CBSS-320372.3.peg.6046	YgfZ
Aspartate carbamoyltransferase regulatory chain (PyrI)	De_Novo_Pyrimidine_Synthesis
Aspartate/ornithine carbamoyltransferase family protein protein YgeW	Putative_diaminopropionate_ammonia-lyase_cluster
Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	Lysine_Biosynthesis_DAP_Pathway	Threonine_and_Homoserine_Biosynthesis
Aspartokinase (EC 2.7.2.4)	CBSS-216591.1.peg.168	Lysine_Biosynthesis_DAP_Pathway	Threonine_and_Homoserine_Biosynthesis
Aspartokinase (EC 2.7.2.4) associated with ectoine biosynthesis	Hyperosmotic_ectoine_biosynthesis
Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.-)	Asp-tRNA(Asn)_transamidation	CBSS-393133.3.peg.695
Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.-)	Asp-tRNA(Asn)_transamidation	CBSS-393133.3.peg.695
Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.-)	Asp-tRNA(Asn)_transamidation	CBSS-393133.3.peg.695
Aspartyl-tRNA(Asn) synthetase	Asp-tRNA(Asn)_transamidation
Aspartyl-tRNA synthetase (EC 6.1.1.12)	tRNA_aminoacylation	Asp-tRNA(Asn)_transamidation
Aspartyl-tRNA synthetase (EC 6.1.1.12), mitochondrial	tRNA_aminoacylation,_mitochondrial
Asp-X dipeptidase	Protein_degradation
Assimilatory nitrate reductase large subunit (EC:1.7.99.4)	Nitrate_and_nitrite_ammonification
ATPase, AFG1 family	Proteolysis_in_bacteria,_ATP-dependent
ATPase component BioM of energizing module of biotin ECF transporter	ECF_class_transporters	Biotin_biosynthesis
ATPase component CbiO of energizing module of cobalt ECF transporter	ECF_class_transporters	Transport_of_Nickel_and_Cobalt	Coenzyme_B12_biosynthesis
ATPase component MtsB of energizing module of methionine-regulated ECF transporter	Methionine_Biosynthesis
ATPase component NikO of energizing module of nickel ECF transporter	ECF_class_transporters	Transport_of_Nickel_and_Cobalt
ATPase component of energizing module of predicted pantothenate ECF transporter	ECF_class_transporters
ATPase component of general energizing module of ECF transporters	ECF_class_transporters	Folate_transporters	Folate_Biosynthesis
ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter	ECF_class_transporters
ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter	ECF_class_transporters
ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	Thiamin_biosynthesis
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11)	Type_4_secretion_and_conjugative_transfer	pVir_Plasmid_of_Campylobacter
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)	Type_4_secretion_and_conjugative_transfer	pVir_Plasmid_of_Campylobacter
ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB11	Plasmid-encoded_T-DNA_transfer
ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB4	Plasmid-encoded_T-DNA_transfer
ATPase with chaperone activity, associated with Flp pilus assembly	Widespread_colonization_island
ATPase YjeE, predicted to have essential role in cell wall biosynthesis	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	YjeE
ATP-binding protein p271	Tn552
ATP-binding protein PhnN	Alkylphosphonate_utilization
ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17), ethanolamine utilization	Propanediol_utilization	Ethanolamine_utilization
ATP-dependent Clp protease adaptor protein ClpS	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent Clp protease ATP-binding subunit ClpA	Proteolysis_in_bacteria,_ATP-dependent	CBSS-176299.4.peg.1996
ATP-dependent Clp protease, ATP-binding subunit ClpC	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent Clp protease ATP-binding subunit ClpX	Proteasome_bacterial	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	Proteasome_bacterial	cAMP_signaling_in_bacteria	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent DNA helicase pcrA (EC 3.6.1.-)	DNA_repair,_bacterial_UvrD_and_related_helicases	CBSS-393121.3.peg.1913
ATP-dependent DNA helicase RecG (EC 3.6.1.-)	DNA-replication	A_Gram-positive_cluster_that_relates_ribosomal_protein_L28P_to_a_set_of_uncharacterized_proteins
ATP-dependent DNA helicase RecQ	DNA_repair,_bacterial_RecFOR_pathway	DNA-replication
ATP-dependent DNA helicase, RecQ family	DNA_repair,_bacterial_RecFOR_pathway
ATP-dependent DNA helicase Rep	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA helicase UvrD/PcrA	DNA_repair,_bacterial_UvrD_and_related_helicases	CBSS-393121.3.peg.1913
ATP-dependent DNA helicase UvrD/PcrA, actinomycete paralog	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA helicase UvrD/PcrA, clostridial paralog	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA helicase UvrD/PcrA, clostridial paralog 2	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA helicase UvrD/PcrA/Rep	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA helicase UvrD/PcrA/Rep, cyanobacterial paralog	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 1	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 2	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA helicase UvrD/PcrA/Rep family, Francisella type	DNA_repair,_bacterial_UvrD_and_related_helicases
ATP-dependent DNA ligase (EC 6.5.1.1)	DNA_Repair_Base_Excision	DNA_replication,_archaeal
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD	Nonhomologous_End-Joining_in_Bacteria
ATP-dependent DNA ligase (EC 6.5.1.1) LigC	Nonhomologous_End-Joining_in_Bacteria
ATP-dependent helicase, DEAD/DEAH box family, associated with Flp pilus assembly	Widespread_colonization_island
ATP-dependent helicase DinG/Rad3	DNA_repair,_bacterial_DinG_and_relatives
ATP-dependent hsl protease ATP-binding subunit HslU	Proteasome_bacterial	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent nuclease, subunit A	ATP-dependent_Nuclease
ATP-dependent nuclease, subunit B	ATP-dependent_Nuclease
ATP-dependent protease domain protein (EC 3.4.21.-)	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent protease HslV (EC 3.4.25.-)	Proteasome_bacterial	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent protease La (EC 3.4.21.53)	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent protease La (EC 3.4.21.53) LonB Type I	Proteasome_bacterial
ATP-dependent protease La (EC 3.4.21.53) Type I	Proteasome_bacterial	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent protease La (EC 3.4.21.53) Type II	Proteasome_bacterial	Proteolysis_in_bacteria,_ATP-dependent
ATP-dependent protease LonB-like Type I	Proteasome_bacterial
ATP-dependent RNA helicase Atu1833	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase BA2475	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase Bcep18194_A5658	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase DbpA	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase NGO0650	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase PA3950	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase RhlB	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase RhlE	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase SO1501	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase SrmB	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase VC1407	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase VCA0061	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase VCA0768	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase VCA0990	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase VF1437	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase VVA0939	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase YfmL	ATP-dependent_RNA_helicases,_bacterial
ATP-dependent RNA helicase YqfR	ATP-dependent_RNA_helicases,_bacterial
ATP diphosphatase (EC 3.6.1.8)	pyrimidine_conversions
ATP/GTP-binding site motif A	CBSS-176299.4.peg.1996
ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Histidine_Biosynthesis
ATP phosphoribosyltransferase (EC 2.4.2.17)	Histidine_Biosynthesis
ATP phosphoribosyltransferase regulatory subunit, divergent variant (EC 2.4.2.17)	Histidine_Biosynthesis
ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	Histidine_Biosynthesis
ATP synthase A chain (EC 3.6.3.14)	F0F1-type_ATP_synthase
ATP synthase alpha chain (EC 3.6.3.14)	F0F1-type_ATP_synthase
ATP synthase B chain (EC 3.6.3.14)	F0F1-type_ATP_synthase
ATP synthase B' chain (EC 3.6.3.14)	F0F1-type_ATP_synthase
ATP synthase beta chain (EC 3.6.3.14)	F0F1-type_ATP_synthase
ATP synthase C chain (EC 3.6.3.14)	F0F1-type_ATP_synthase
ATP synthase delta chain (EC 3.6.3.14)	F0F1-type_ATP_synthase
ATP synthase epsilon chain (EC 3.6.3.14)	F0F1-type_ATP_synthase
ATP synthase gamma chain (EC 3.6.3.14)	F0F1-type_ATP_synthase
ATP synthase protein I	F0F1-type_ATP_synthase
AttE component of AttEFGH ABC transport system	AttEFGH_ABC_Transport_System
AttF component of AttEFGH ABC transport system	AttEFGH_ABC_Transport_System
AttG component of AttEFGH ABC transport system	AttEFGH_ABC_Transport_System
AttH component of AttEFGH ABC transport system	AttEFGH_ABC_Transport_System
Autoinducer 1 sensor kinase/phosphatase LuxN (EC 2.7.3.-) (EC 3.1.3.-)	Quorum-sensing_in_Vibrio
Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
Autoinducer 2 (AI-2) modifying protein LsrG	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
Autoinducer 2-binding periplasmic protein LuxP precursor	Quorum-sensing_in_Vibrio	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
Autoinducer 2 sensor kinase/phosphatase LuxQ (EC 2.7.3.-) (EC 3.1.3.-)	Quorum-sensing_in_Vibrio	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
Autoinducer synthesis protein LuxI	Acyl_Homoserine_Lactone_(AHL)_Autoinducer_Quorum_Sensing_	Biolumenescence	Luciferases
Autolysin [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Autolysin sensor kinase (EC 2.7.3.-)	Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A
Autolysis histidine kinase LytS	Murein_hydrolase_regulation_and_cell_death
Autolysis response regulater LytR	Murein_hydrolase_regulation_and_cell_death
B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2)	Propionyl-CoA_to_Succinyl-CoA_Module
Bacillolysin (EC 3.4.24.28)	CBSS-265072.7.peg.546
Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE	Legionaminic_Acid_Biosynthesis
Bacillosamine/Legionaminic acid biosynthesis N-acetyltrasferase PglD (PseH and NeuD homolog)	Legionaminic_Acid_Biosynthesis
Bacilysin biosynthesis oxidoreductase BacC	Bacilysin_biosynthesis
Bacilysin biosynthesis protein BacA	Bacilysin_biosynthesis
Bacilysin biosynthesis protein BacB	Bacilysin_biosynthesis
Bacilysin exporter protein BacE	Bacilysin_biosynthesis
Bacitracin export ATP-binding protein BceA	Bacitracin_Stress_Response
Bacitracin export permease protein BceB	Bacitracin_Stress_Response
Bacterial proteasome-activating AAA-ATPase (PAN)	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Proteasome_archaeal
Bacteriochlorophyllide c C12 methyltransefase BchR	Chlorophyll_Biosynthesis
Bacteriochlorophyllide c C8 methyltransefase BchQ	Chlorophyll_Biosynthesis
Bacteriocin immunity protein BlpL	Bacteriocin-like_peptides_Blp
Bacteriocin-like peptide I BlpI	Bacteriocin-like_peptides_Blp
Bacteriocin-like peptide J BlpJ	Bacteriocin-like_peptides_Blp
Bacteriocin-like peptide M BlpM	Bacteriocin-like_peptides_Blp
Bacteriocin-like peptide N BlpN	Bacteriocin-like_peptides_Blp
Bacteriocin-like peptide O BlpO	Bacteriocin-like_peptides_Blp
Bacteriocin production protein	Colicin_V_and_Bacteriocin_Production_Cluster
Bacterioferritin	Iron_acquisition_in_Vibrio
Bacterioferritin-associated ferredoxin	Iron_acquisition_in_Vibrio
bacteriophytochrome heme oxygenase BphO	Oxidative_stress
Bacterocin transport accessory protein	Bacteriocin-like_peptides_Blp
Bactriocin immunity protein BlpX	Bacteriocin-like_peptides_Blp
Bactriocin immunity protein BlpY	Bacteriocin-like_peptides_Blp
BarA-associated response regulator UvrY (= GacA = SirA)	Type_III_secretion_system_orphans	Quorum_sensing_regulation_in_Pseudomonas	Pseudomonas_quinolone_signal_PQS	Orphan_regulatory_proteins
BarA sensory histidine kinase (= VarS = GacS)	Type_III_secretion_system_orphans	Orphan_regulatory_proteins
BatA (Bacteroides aerotolerance operon)	CBSS-345072.3.peg.1318
BatB	CBSS-345072.3.peg.1318
BatC	CBSS-345072.3.peg.1318
BatD	CBSS-345072.3.peg.1318
BatE	CBSS-345072.3.peg.1318
benABC operon transcriptional activator BenR	Benzoate_degradation
Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)	Benzoate_degradation
Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)	Benzoate_catabolism	Benzoate_degradation
Benzoate 1,2-dioxygenase (EC 1.14.12.10)	Benzoate_catabolism
Benzoate catabolic operon transcription regulator	Benzoate_degradation
Benzoate-CoA ligase (EC 6.2.1.25)	Benzoate_transport_and_degradation_cluster	Anaerobic_benzoate_metabolism
benzoate degradation ring-cleavage hydrolase	Benzoate_transport_and_degradation_cluster
benzoate dioxygenase, ferredoxin reductase component	Benzoate_degradation
benzoate MFS transporter BenK	Benzoate_degradation
benzoate-specific porin	Benzoate_degradation
Benzoate transport, ATPase component	Benzoate_transport_and_degradation_cluster
Benzoate transport, ATP binding protein	Benzoate_transport_and_degradation_cluster
Benzoate transport, extracellular ligand-binding receptor	Benzoate_transport_and_degradation_cluster
Benzoate transport, inner-membrane translocator	Benzoate_transport_and_degradation_cluster
Benzoate transport, inner-membrane translocator precursor	Benzoate_transport_and_degradation_cluster
Benzoate transport, inner membrane transport component	Benzoate_transport_and_degradation_cluster
Benzoate transport protein	Benzoate_degradation
Benzoate transport related protein	Benzoate_transport_and_degradation_cluster
Benzoylacetate CoA-ligase	Anaerobic_toluene_and_ethylbenzene_degradation
benzoyl-CoA-dihydrodiol lyase (BoxC)	Benzoate_transport_and_degradation_cluster
Benzoyl-CoA oxygenase component A	Benzoate_transport_and_degradation_cluster
Benzoyl-CoA oxygenase component B	Benzoate_transport_and_degradation_cluster
Benzoylformate decarboxylase (EC 4.1.1.7)	Benzoate_degradation
Benzoylsuccinyl-CoA thiolase alpha subunit (EC:2.3.1.-)	Anaerobic_toluene_and_ethylbenzene_degradation
Benzoylsuccinyl-CoA thiolase beta subunit (EC:2.3.1.-)	Anaerobic_toluene_and_ethylbenzene_degradation
Benzylsuccinate synthase activating enzyme (EC 1.97.1.4)	Anaerobic_toluene_and_ethylbenzene_degradation
Benzylsuccinate synthase alpha subunit (EC 4.1.99.11)	Anaerobic_toluene_and_ethylbenzene_degradation
Benzylsuccinate synthase beta subunit (EC 4.1.99.11)	Anaerobic_toluene_and_ethylbenzene_degradation
Benzylsuccinate synthase gamma subunit (EC 4.1.99.11)	Anaerobic_toluene_and_ethylbenzene_degradation
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA (EC 3.6.3.42)	Synthesis_of_osmoregulated_periplasmic_glucans
Beta-1,3-glucosyltransferase	LOS_core_oligosaccharide_biosynthesis	CBSS-237727.3.peg.501
Beta-1,4-galactosyltransferase	LOS_core_oligosaccharide_biosynthesis
Beta-1,4-N-acetylgalactosaminyltransferase (EC 2.4.1.-)	Sialic_Acid_Metabolism
Beta-amylase (EC 3.2.1.2)	Trehalose_Biosynthesis
Beta-amyrin synthase	Phytosterol_biosynthesis
Beta-carotene hydroxylase	Carotenoids	Myxoxanthophyll_biosynthesis_in_Cyanobacteria
Beta-carotene ketolase (EC 1.14.-.-)	Carotenoids	Proteorhodopsin
Beta-fimbriae chaperone protein	&#946;-Fimbriae
Beta-fimbriae probable major subunit	&#946;-Fimbriae
Beta-fimbriae usher protein	&#946;-Fimbriae
Beta-galactosidase 3	Galactosylceramide_and_Sulfatide_metabolism	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Beta-galactosidase (EC 3.2.1.23)	Galactosylceramide_and_Sulfatide_metabolism	Lactose_and_Galactose_Uptake_and_Utilization	Sugar_utilization_in_Thermotogales	Lactose_utilization
Beta-galactosidase large subunit (EC 3.2.1.23)	Galactosylceramide_and_Sulfatide_metabolism	Lactose_and_Galactose_Uptake_and_Utilization
Beta-galactosidase small subunit (EC 3.2.1.23)	Galactosylceramide_and_Sulfatide_metabolism	Lactose_and_Galactose_Uptake_and_Utilization
Beta-glucanase precursor (EC 3.2.1.73)	Beta-Glucoside_Metabolism
Beta-glucosidase (EC 3.2.1.21)	Sucrose_Metabolism	Sugar_utilization_in_Thermotogales	Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Beta-Glucoside_Metabolism
Beta-glucoside bgl operon antiterminator, BglG family	Beta-Glucoside_Metabolism
Beta-glucuronidase (EC 3.2.1.31)	Sucrose_Metabolism	beta-glucuronide_utilization
Beta-hexosaminidase (EC 3.2.1.52)	(GlcNAc)2_Catabolic_Operon	Chitin_and_N-acetylglucosamine_utilization	Sugar_utilization_in_Thermotogales	Purine_Utilization	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Betaine aldehyde dehydrogenase (EC 1.2.1.8)	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Betaine--homocysteine S-methyltransferase (EC 2.1.1.5)	Methionine_Biosynthesis
Betaine reductase component B alpha subunit (EC 1.21.4.4)	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Glycine_reductase,_sarcosine_reductase_and_betaine_reductase
Betaine reductase component B beta subunit (EC 1.21.4.4)	Glycine_reductase,_sarcosine_reductase_and_betaine_reductase
Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)	Catechol_branch_of_beta-ketoadipate_pathway	Chloroaromatic_degradation_pathway	Protocatechuate_branch_of_beta-ketoadipate_pathway
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Chloroaromatic_degradation_pathway	Protocatechuate_branch_of_beta-ketoadipate_pathway
Beta-ketoadipyl CoA thiolase (EC 2.3.1.9)	Benzoate_transport_and_degradation_cluster	Protocatechuate_branch_of_beta-ketoadipate_pathway
Beta-lactamase	Beta-lactamase
Beta-lactamase AmpS	Beta-lactamase
Beta-lactamase (Cephalosporinase) (EC 3.5.2.6)	Beta-lactamase
Beta-lactamase class A	BlaR1_Family_Regulatory_Sensor-transducer_Disambiguation	Beta-lactamase
Beta-lactamase, class C	Beta-lactamase_cluster_in_Streptococcus
Beta-lactamase class C and other penicillin binding proteins	Beta-lactamase
Beta-lactamase class D	Beta-lactamase
Beta-lactamase CTX-M-16	Beta-lactamase
Beta-lactamase (EC 3.5.2.6)	BlaR1_Family_Regulatory_Sensor-transducer_Disambiguation	Beta-lactamase	Tn552
beta-lactamase-like	CBSS-316056.14.peg.880
Beta-lactamase PSE-2 precursor (EC 3.5.2.6)	Beta-lactamase
Beta-lactamase regulatory sensor-transducer BlaR1	BlaR1_Family_Regulatory_Sensor-transducer_Disambiguation	Tn552	Methicillin_resistance_in_Staphylococci
Beta-lactamase repressor BlaI	BlaR1_Family_Regulatory_Sensor-transducer_Disambiguation	Beta-lactamase	Tn552	Methicillin_resistance_in_Staphylococci
Beta-lysine acetyltransferase (EC 2.3.1.-)	Lysine_degradation
Beta-mannosidase (EC 3.2.1.25)	Sugar_utilization_in_Thermotogales	Mannose_Metabolism
Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	Murein_Hydrolases	Recycling_of_Peptidoglycan_Amino_Sugars
Beta-phosphoglucomutase (EC 5.4.2.6)	Maltose_and_Maltodextrin_Utilization	Trehalose_Uptake_and_Utilization
beta-ribofuranosylaminobenzene 5'-phosphate synthase	methanopterin_biosynthesis	Methanopterin_biosynthesis2
Beta-ureidopropionase (EC 3.5.1.6)	Hydantoin_metabolism	L-2-amino-thiazoline-4-carboxylic_acid-Lcysteine_conversion	Pyrimidine_utilization
Beta-ureidopropionase, eukaryotic type (EC 3.5.1.6)	Pyrimidine_utilization
Beta-xylosidase (EC 3.2.1.37)	Sugar_utilization_in_Thermotogales	Xylose_utilization
BH1670 unknown conserved protein in B. subtilis	CBSS-393130.3.peg.129
BH2577 unknown conserved protein in B. subtilis	CBSS-269801.1.peg.1725
BH3430 unknown conserved protein	CBSS-393123.3.peg.2365	CBSS-176279.3.peg.298
BH3433 unknown conserved protein in B. subtilis	CBSS-393123.3.peg.2365	CBSS-176279.3.peg.298
Bicarbonate transporter, bicarbonate binding protein	CO2_uptake,_carboxysome
Bicarbonate transporter, bicarbonate binding protein 2	CO2_uptake,_carboxysome
Bicarbonate transport system permease protein	CO2_uptake,_carboxysome
Bifunctional autolysin Atl	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Adhesins_in_Staphylococcus	Biofilm_formation_in_Staphylococcus
bifunctional hemolysin-adenylate cyclase precursor	cAMP_signaling_in_bacteria
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities	CBSS-89187.3.peg.2957
Bilin biosynthesis protein CpeY	Bilin_Biosynthesis
Bilin biosynthesis protein CpeZ	Bilin_Biosynthesis
Bilin biosynthesis protein MpeU	Bilin_Biosynthesis
Bilin biosynthesis protein PecE	Bilin_Biosynthesis
Bilin biosynthesis protein PecF	Bilin_Biosynthesis
Biliverdin reductase (EC 1.3.1.24)	Bilin_Biosynthesis
Binding-protein-dependent transport systems inner membrane component:ATP/GTP-binding site motif A (P-loop) :TrkA-N:Potassium e	Potassium_homeostasis
Biofilm operon icaABCD HTH-type negative transcriptional regulator IcaR	Biofilm_formation_in_Staphylococcus
Biofilm PGA outer membrane secretin PgaA	Biofilm_Adhesin_Biosynthesis
Biofilm PGA synthesis auxiliary protein PgaD	Biofilm_Adhesin_Biosynthesis
Biofilm PGA synthesis deacetylase PgaB (EC 3.-)	Biofilm_Adhesin_Biosynthesis
Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-)	Biofilm_Adhesin_Biosynthesis
Biopolymer transport ExbD protein	Ton_and_Tol_transport_systems
Biopolymer transport protein ExbD1	Hemin_transport_system
Biopolymer transport protein ExbD/TolR	Ton_and_Tol_transport_systems
Biosynthetic arginine decarboxylase (EC 4.1.1.19)	Acid_resistance_mechanisms	Polyamine_Metabolism	Arginine_and_Ornithine_Degradation
Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)	Aminotransferases:Aromatic_Pathway_and_More,_A_work_in_progress	Phenylalanine_and_Tyrosine_Branches_from_Chorismate
Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	Aminotransferases:Aromatic_Pathway_and_More,_A_work_in_progress	Phenylalanine_and_Tyrosine_Branches_from_Chorismate
Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	Fatty_Acid_Biosynthesis_FASII
Biotin carboxylase of methylcrotonyl-CoA carboxylase (EC 6.3.4.14)	HMG_CoA_Synthesis	Leucine_Degradation_and_HMG-CoA_Metabolism
Biotin carboxylase of Propionyl-CoA carboxylase (EC 6.3.4.14)	Propionyl-CoA_to_Succinyl-CoA_Module
Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Fatty_Acid_Biosynthesis_FASII
Biotin carboxyl carrier protein of glutaconyl-CoA decarboxylase	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Biotin carboxyl carrier protein of methylcrotonyl-CoA carboxylase	HMG_CoA_Synthesis	Leucine_Degradation_and_HMG-CoA_Metabolism
Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Biotin carboxyl carrier protein of oxaloacetate decarboxylase	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Biotin carboxyl carrier protein of Propionyl-CoA carboxylase	Propionyl-CoA_to_Succinyl-CoA_Module
Biotin operon repressor	Biotin_biosynthesis	CBSS-280355.3.peg.2835
Biotin-protein ligase (EC 6.3.4.15)	Biotin_biosynthesis	CBSS-280355.3.peg.2835
Biotin sulfoxide reductase (EC 1.-.-.-)	trimethylamine_N-oxide_(TMAO)_reductase
Biotin synthase (EC 2.8.1.6)	Biotin_biosynthesis	YgfZ
Biotin synthesis protein bioC	Biotin_biosynthesis	CBSS-216591.1.peg.168
Biotin synthesis protein bioG	Biotin_biosynthesis
Biotin synthesis protein bioH	Biotin_biosynthesis
Biotin synthesis protein bioK	Biotin_biosynthesis
Biotin synthesis protein bioZ	Biotin_biosynthesis
Biphenyl-2,3-diol 1,2-dioxygenase (EC 1.13.11.39)	Biphenyl_Degradation
biphenyl-2,3-diol 1,2-dioxygenase III-related protein	Biphenyl_Degradation
biphenyl-2,3-diol 1,2-dioxygenase III-related protein VCA0463 VCA0328 VCA0341	Biphenyl_Degradation
Biphenyl dioxygenase alpha subunit (EC 1.14.12.18)	Biphenyl_Degradation
Biphenyl dioxygenase beta subunit (EC 1.14.12.18)	Biphenyl_Degradation
Biphenyl dioxygenase system ferredoxin component	Biphenyl_Degradation
Biphenyl dioxygenase system ferredoxin--NAD( ) reductase component (EC 1.18.1.3)	Biphenyl_Degradation
Bipolar DNA helicase	Rad50-Mre11::SbcD-SbcC_DNA_Repair_Module
Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)	pyrimidine_conversions	CBSS-176299.4.peg.1996	CBSS-176279.3.peg.1262
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41)	EC49-61
BlpT protein, fusion	Bacteriocin-like_peptides_Blp
BlpZ protein, fusion	Bacteriocin-like_peptides_Blp
Blr3520 protein homolog, hypothetical protein	Sulfur_oxidation
Blue copper oxidase CueO precursor	Copper_homeostasis
Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1)	Type_4_secretion_and_conjugative_transfer
Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)	Branched_chain_amino_acid_degradation_regulons	Valine_degradation	Leucine_Degradation_and_HMG-CoA_Metabolism	Isobutyryl-CoA_to_Propionyl-CoA_Module	Isoleucine_degradation
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Branched_chain_amino_acid_degradation_regulons	Valine_degradation	Leucine_Degradation_and_HMG-CoA_Metabolism	Dehydrogenase_complexes	Isoleucine_degradation
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Branched_chain_amino_acid_degradation_regulons	Valine_degradation	Leucine_Degradation_and_HMG-CoA_Metabolism	Dehydrogenase_complexes	Isoleucine_degradation
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)	ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	C_jejuni_colonization_of_chick_caeca
Branched-chain amino acid aminotransferase (EC 2.6.1.42)	Leucine_Biosynthesis	Aminotransferases:Aromatic_Pathway_and_More,_A_work_in_progress	Pyruvate_Alanine_Serine_Interconversions	Branched-Chain_Amino_Acid_Biosynthesis	Alanine_biosynthesis	Branched_chain_amino_acid_degradation_regulons	Valine_degradation	Leucine_Degradation_and_HMG-CoA_Metabolism	Dehydrogenase_complexes	Isoleucine_degradation	Methionine_Salvage
Branched-chain amino acid transport ATP-binding protein livF (TC 3.A.1.4.1)	ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)
Branched-chain amino acid transport ATP-binding protein livG (TC 3.A.1.4.1)	ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)
Branched-chain amino acid transport system permease protein livM (TC 3.A.1.4.1)	ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldA	D-gluconate_and_ketogluconates_metabolism
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldB	D-gluconate_and_ketogluconates_metabolism
Broad-substrate range phospholipase C (EC 3.1.4.3)	Listeria_Pathogenicity_Island_LIPI-1_extended
Bsl0345 protein	CBSS-316056.14.peg.880
B. subtilis YutD-like protein lmo2402	CBSS-393123.3.peg.2365	CBSS-176279.3.peg.298
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	Lysine_fermentation	Polyhydroxybutyrate_metabolism
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	Lysine_fermentation	Polyhydroxybutyrate_metabolism
Butyrate kinase (EC 2.7.2.7)	CBSS-261591.3.peg.3916	Valine_degradation	CBSS-335541.4.peg.1350	Acetyl-CoA_fermentation_to_Butyrate	Isoleucine_degradation
Butyryl-CoA dehydrogenase (EC 1.3.99.2)	Lysine_fermentation	Valine_degradation	Acetone_Butanol_Ethanol_Synthesis	Acetyl-CoA_fermentation_to_Butyrate	Isobutyryl-CoA_to_Propionyl-CoA_Module	Isoleucine_degradation
C-1'-hydroxylase CruF	Myxoxanthophyll_biosynthesis_in_Cyanobacteria
C3-degrading proteinase	Beta-lactamase_cluster_in_Streptococcus
C3 family ADP-ribosyltransferase (EC 2.4.2.-)	Streptococcus_pyogenes_Virulome
C4 aminotransferase specific for PseB product (PseC, second step of pseudaminic acid biosynthesis)	Pseudaminic_Acid_Biosynthesis
C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)	Citrate_Metabolism,_Transport,_and_Regulation
C4-type zinc finger protein, DksA/TraR family	Zinc_regulated_enzymes	CBSS-235.1.peg.567
C50 carotenoid epsilon cyclase	Carotenoids
C5a peptidase (EC 3.4.21.-)	Streptococcal_Mga_Regulon	Streptococcus_pyogenes_Virulome
Ca(2+) Citrate symporter (TC 2.A.11.1.2)	Citrate_Metabolism,_Transport,_and_Regulation
Cadherin-4 precursor	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Cadmium efflux system accessory protein	Cadmium_resistance
Cadmium resistance protein	Cadmium_resistance
Cadmium-transporting ATPase (EC 3.6.3.3)	Cobalt-zinc-cadmium_resistance	Cadmium_resistance
Caffeic-o-methyltransferase (EC 2.1.1.68)	Phenylpropanoids_general_biosynthesis
calmodulin sensitive adenylate cyclase, edema factor, cya, plasmid pXO1, B. anthracis (M23179, M24074)	cAMP_signaling_in_bacteria
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	cAMP_signaling_in_bacteria	CBSS-258594.1.peg.3339	Glutathione-regulated_potassium-efflux_system_and_associated_functions
cAMP-dependent Kef-type K+ transport system	cAMP_signaling_in_bacteria	Potassium_homeostasis
CAMP factor	Streptococcus_pyogenes_Virulome
CAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily	cAMP_signaling_in_bacteria
cAMP-specific 3',5'-cyclic phosphodiesterase 4A (EC 3.1.4.17)	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Candidate substrate-specific domain of ECF transporters in Mycobacteria	ECF_class_transporters
Cannabinoid receptor 1	Cannabinoid_biosynthesis
Cannabinoid receptor 2	Cannabinoid_biosynthesis
CapK protein, putative	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Capsular polysaccharide ABC transporter, ATP-binding protein KpsT	Capsular_Polysaccharide_(CPS)_of_Campylobacter	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide ABC transporter, permease protein KpsM	Capsular_Polysaccharide_(CPS)_of_Campylobacter	Rhamnose_containing_glycans	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide biosynthesis/export periplasmic protein WcbA	Rhamnose_containing_glycans	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide biosynthesis/export periplasmic protein WcbC	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide biosynthesis fatty acid synthase WcbR	Capsular_heptose_biosynthesis
Capsular polysaccharide biosynthesis heptosyltransferase HddD	Capsular_heptose_biosynthesis
capsular polysaccharide biosynthesis protein	Vibrio_Core_Oligosaccharide_Biosynthesis	Rhamnose_containing_glycans
Capsular polysaccharide biosynthesis protein CapD	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide biosynthesis protein Cps4E	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci
Capsular polysaccharide biosynthesis protein CpsK(V)	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Streptococcus_agalactiae_virulome
capsular polysaccharide biosynthesis protein, putative	Vibrio_Core_Oligosaccharide_Biosynthesis
Capsular polysaccharide biosynthesis protein WcbF	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent epimerase/dehydratase family	Capsular_heptose_biosynthesis	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide biosynthesis protein WcbQ	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide biosythesis protein CpsI	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Streptococcus_agalactiae_virulome
Capsular polysaccharide export system inner membrane protein KpsE	Capsular_Polysaccharide_(CPS)_of_Campylobacter	Rhamnose_containing_glycans	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide export system periplasmic protein KpsD	Capsular_Polysaccharide_(CPS)_of_Campylobacter	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide export system protein KpsC	Rhamnose_containing_glycans	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide export system protein KpsF	Capsular_Polysaccharide_(CPS)_of_Campylobacter
Capsular polysaccharide export system protein KpsS	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide glycosyltransferase biosynthesis protein WcbB	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Capsular polysaccharide repeating-unit polymerase CpsH	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Streptococcus_agalactiae_virulome
Capsular polysaccharide repeat unit transporter CpsL	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Streptococcus_agalactiae_virulome
Capsular polysaccharide synthesis enzyme Cap5A	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5B	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5C	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5D	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5E	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5F	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5G	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5H	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5I	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5J	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5K	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5L	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5M	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5N	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5O	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap5P	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8A	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8B	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8C	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8D	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8E	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8F	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8G	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8H	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8I	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8J	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8K	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8L	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8M	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8N	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8O	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme Cap8P	Serotype_determining_Capsular_polysaccharide_biosynthesis_in_Staphylococcus
Capsular polysaccharide synthesis enzyme CpsA, sugar transferase	Capsular_Polysaccharide_Biosynthesis_in_Vibrio	Exopolysaccharide_Biosynthesis	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Capsular polysaccharide synthesis enzyme CpsB	Capsular_Polysaccharide_Biosynthesis_in_Vibrio	Exopolysaccharide_Biosynthesis	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export	Capsular_Polysaccharide_Biosynthesis_in_Vibrio	Exopolysaccharide_Biosynthesis	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Capsular polysaccharide synthesis enzyme CpsD, exopolysaccharide synthesis	Capsular_Polysaccharide_Biosynthesis_in_Vibrio	Exopolysaccharide_Biosynthesis	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Capsular polysaccharide synthesis enzyme CpsE	Capsular_Polysaccharide_Biosynthesis_in_Vibrio	Exopolysaccharide_Biosynthesis
Capsular polysaccharide synthesis enzyme cpsF, glycosyltransferase	Capsular_Polysaccharide_Biosynthesis_in_Vibrio
Capsular polysaccharide synthesis enzyme cpsG, Lipid A core - O-antigen ligase	Capsular_Polysaccharide_Biosynthesis_in_Vibrio
Capsular polysaccharide synthesis enzyme cpsH	Capsular_Polysaccharide_Biosynthesis_in_Vibrio
Capsular polysaccharide synthesis enzyme cpsI, glycosyltransferase	Capsular_Polysaccharide_Biosynthesis_in_Vibrio
Capsular polysaccharide synthesis enzyme cpsJ, Membrane protein, export of O-antigen and teichoic acid	Capsular_Polysaccharide_Biosynthesis_in_Vibrio
Capsule synthesis positive regulator AcpA	Poly-gamma-glutamate_biosynthesis
Capsule synthesis positive regulator AcpB	Poly-gamma-glutamate_biosynthesis
Carbamate kinase (EC 2.7.2.2)	Arginine_Deiminase_Pathway	Polyamine_Metabolism	MLST	Arginine_and_Ornithine_Degradation
Carbamate kinase-like protein YqeA	Putative_diaminopropionate_ammonia-lyase_cluster
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	De_Novo_Pyrimidine_Synthesis	Macromolecular_synthesis_operon
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	De_Novo_Pyrimidine_Synthesis	CBSS-306254.1.peg.1508	Macromolecular_synthesis_operon
Carbamoyltransferase in large core OS assembly cluster	Core_Oligosaccharide_Glycosylation_in_Pseudomonas
Carbon dioxide concentrating mechanism protein CcmO	CO2_uptake,_carboxysome
Carbonic anhydrase (EC 4.2.1.1)	Zinc_regulated_enzymes	CO2_uptake,_carboxysome	Cyanate_hydrolysis	Bacterial_cyanide_production_and_tolerance_mechanisms	Carboxysome
Carbonic anhydrase, gamma class (EC 4.2.1.1)	Zinc_regulated_enzymes	CO2_uptake,_carboxysome
Carbon monoxide dehydrogenase	Acetyl-CoA_pathway_of_CO2_fixation
Carbon monoxide dehydrogenase CooS subunit (EC 1.2.99.2)	Carbon_monoxide_induced_hydrogenase
carbon monoxide dehydrogenase D protein	CBSS-314269.3.peg.1840	CO_Dehydrogenase	Carbon_monoxide_dehydrogenase_maturation_factors
carbon monoxide dehydrogenase E protein	CBSS-314269.3.peg.1840	CO_Dehydrogenase	Carbon_monoxide_dehydrogenase_maturation_factors
Carbon-monoxide dehydrogenase form II, large subunit (EC 1.2.99.2)	CBSS-314269.3.peg.1840	CO_Dehydrogenase
Carbon monoxide dehydrogenase form I, large chain( EC:1.2.99.2 )	CBSS-314269.3.peg.1840	CO_Dehydrogenase
Carbon monoxide dehydrogenase F protein	CBSS-314269.3.peg.1840	CO_Dehydrogenase	Carbon_monoxide_dehydrogenase_maturation_factors
carbon monoxide dehydrogenase G protein	CO_Dehydrogenase	Carbon_monoxide_dehydrogenase_maturation_factors
Carbon monoxide dehydrogenase large chain (EC 1.2.99.2)	CBSS-314269.3.peg.1840	CO_Dehydrogenase
Carbon monoxide dehydrogenase large chain (EC 1.2.99.2) parolog without usual motifs	CBSS-314269.3.peg.1840	CO_Dehydrogenase
Carbon monoxide dehydrogenase large chain (EC 1.2.99.2) without typical motifs	CBSS-314269.3.peg.1840	CO_Dehydrogenase
Carbon monoxide dehydrogenase medium chain (EC 1.2.99.2)	CBSS-314269.3.peg.1840	CO_Dehydrogenase
carbon monoxide dehydrogenase operon C protein	CBSS-314269.3.peg.1840	CO_Dehydrogenase
Carbon monoxide dehydrogenase small chain (EC 1.2.99.2)	CBSS-314269.3.peg.1840	CO_Dehydrogenase
Carbon monoxide-induced hydrogenase iron-sulfur protein CooX	Carbon_monoxide_induced_hydrogenase
Carbon monoxide-induced hydrogenase large subunit CooH	Carbon_monoxide_induced_hydrogenase
Carbon monoxide-induced hydrogenase membrane protein CooM	Carbon_monoxide_induced_hydrogenase
Carbon monoxide-induced hydrogenase NuoC-like protein CooU	Carbon_monoxide_induced_hydrogenase
Carbon monoxide-induced hydrogenase proton translocating subunit CooK	Carbon_monoxide_induced_hydrogenase
Carbon monoxide-induced hydrogenase small subunit CooL	Carbon_monoxide_induced_hydrogenase
Carbon monoxide-responsive transcriptional activator CooA	Carbon_monoxide_induced_hydrogenase
Carbon starvation protein A	Carbon_Starvation	Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A
Carbon starvation protein A paralog	Carbon_Starvation
Carbon storage regulator	Carbon_Starvation
Carboxyl-terminal protease (EC 3.4.21.102)	CBSS-224911.1.peg.435
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	Polyamine_Metabolism
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-)	Polyamine_Metabolism
Carboxypeptidase U, proteinase M14.009	Coagulation_cascade
Carboxysome protein CcmL	CO2_uptake,_carboxysome
Carboxysome protein CcmM	CO2_uptake,_carboxysome
Carboxysome protein CcmN	CO2_uptake,_carboxysome
carboxysome shell protein CsoS1	CO2_uptake,_carboxysome
carboxysome shell protein CsoS2	CO2_uptake,_carboxysome
carboxysome shell protein CsoS3	CO2_uptake,_carboxysome
Carboxy-terminal intein-mediated trans-splice	Inteins
Cardiolipin synthetase (EC 2.7.8.-)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria
Carnitine operon protein CaiE	Carnitine_Metabolism_in_Microorganisms
Carnitine racemase (EC 5.-.-.-)	carnitine_metabolism	Carnitine_Metabolism_in_Microorganisms
Carnitinyl-CoA dehydratase (EC 4.2.1.-)	carnitine_metabolism	Carnitine_Metabolism_in_Microorganisms
Carotenoid cis-trans isomerase (EC 5.2.-.-)	Carotenoids
Catabolite control protein A	HPr_catabolite_repression_system
Catabolite repression HPr-like protein Crh	HPr_catabolite_repression_system
Catalase (EC 1.11.1.6)	Oxidative_stress	Photorespiration_(oxidative_C2_cycle)	Protection_from_Reactive_Oxygen_Species
Catalitic subunit of carbazole 1,9a-dioxygenase	carbazol_degradation_cluster
Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A	Folate_transporters	p-Aminobenzoyl-Glutamate_Utilization
Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit B	Folate_transporters	p-Aminobenzoyl-Glutamate_Utilization
Catechol 1,2-dioxygenase 1 (EC 1.13.11.1)	Catechol_branch_of_beta-ketoadipate_pathway
Catechol 1,2-dioxygenase (EC 1.13.11.1)	Benzoate_catabolism	Catechol_branch_of_beta-ketoadipate_pathway	Chlorobenzoate_degradation	Benzoate_degradation
Catechol 2,3-dioxygenase (EC 1.13.11.2)	CBSS-232721.5.peg.360	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
Catechol siderophore ABC transporter, ATP-binding component	Iron_acquisition_in_Vibrio
Catechol siderophore ABC transporter, permease component	Iron_acquisition_in_Vibrio
Catechol siderophore ABC transporter, substrate-binding protein	Iron_acquisition_in_Vibrio
Cation ABC transporter, periplasmic cation-binding protein, PA2407 homolog	Pyoverdine_biosynthesis_new
Cation efflux system protein CusA	Cobalt-zinc-cadmium_resistance
Cation efflux system protein CusC precursor	Cobalt-zinc-cadmium_resistance
Cation efflux system protein cusF precursor	Cobalt-zinc-cadmium_resistance
CblX, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase	Coenzyme_B12_biosynthesis
CblY, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase	Coenzyme_B12_biosynthesis
CblZ, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase	Coenzyme_B12_biosynthesis
CBS domain protein sometimes clustered with YjeE	YjeE
cb-type cytochrome c oxidase subunit IV [EC:1.9.3.1]	Terminal_cytochrome_C_oxidases
CcdA protein (antitoxin to CcdB)	Toxin-antitoxin_systems_(other_than_RelBE_and_MazEF)	F_plasmid_replication
CcdB toxin protein	Toxin-antitoxin_systems_(other_than_RelBE_and_MazEF)	F_plasmid_replication
Ccs1/ResB-related putative cytochrome C-type biogenesis protein	Biogenesis_of_c-type_cytochromes	CBSS-196164.1.peg.461
CD44 antigen precursor	MT1-MMP_Pericellular_Network
Cd(II)/Pb(II)-responsive transcriptional regulator	Cobalt-zinc-cadmium_resistance
CDK-activating kinase assembly factor MAT1	RNA_polymerase_II_initiation_factors
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CBSS-1806.1.peg.1285	CBSS-257314.1.peg.676	Competence_or_DNA_damage-inducible_protein_CinA_and_related_protein_families	CBSS-316407.3.peg.1371
CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria
CDP-glycerol: N-acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenyl glycerophosphotransferase	Teichoic_and_lipoteichoic_acids_biosynthesis
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12)	Teichoic_and_lipoteichoic_acids_biosynthesis
CDP-ribitol:poly(ribitol phosphate) ribitol phosphotransferase	Teichoic_and_lipoteichoic_acids_biosynthesis
CDS_ID OB2202	CBSS-393130.3.peg.794
Cell division control protein 6	DNA_replication,_archaeal
cell division cycle 37 homolog (S. cerevisiae)	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Cell division inhibitor	CBSS-261594.1.peg.788	CBSS-83333.1.peg.946	Persister_Cells
cell-division initiation protein	CBSS-281309.1.peg.50
Cell division initiation protein DivIVA	Bacterial_Cell_Division	Bacterial_Cytoskeleton
Cell division protein BolA	Bacterial_Cell_Division	Glutaredoxins
Cell division protein DivIC	Bacterial_Cell_Division	CBSS-281309.1.peg.50
Cell division protein FtsA	Cell_Division_Cluster	Bacterial_Cell_Division	Bacterial_Cytoskeleton
Cell division protein FtsB	Bacterial_Cytoskeleton
Cell division protein FtsH (EC 3.4.24.-)	Bacterial_Cell_Division	CBSS-281309.1.peg.50
Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	CBSS-83331.1.peg.3039	CBSS-269801.1.peg.1725	Bacterial_Cell_Division	Peptidoglycan_Biosynthesis	Bacterial_Cytoskeleton
Cell division protein ftsJ	Bacterial_Cell_Division
Cell division protein FtsK	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Bacterial_Cell_Division	Unspecified_monosaccharide_transport_cluster	Bacterial_Cytoskeleton
Cell division protein FtsL	Bacterial_Cell_Division	Bacterial_Cytoskeleton
Cell division protein FtsN	Bacterial_Cytoskeleton
Cell division protein ftsQ	Bacterial_Cell_Division
Cell division protein FtsQ	Bacterial_Cytoskeleton
Cell division protein FtsQ homolog	Bacterial_Cytoskeleton
Cell division protein FtsW	Bacterial_Cell_Division	Bacterial_Cytoskeleton
Cell division protein FtsX	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)	Bacterial_motility:Gliding	Bacterial_Cell_Division	CBSS-393121.3.peg.2760	Heat_shock_Cell_division_Proteases_and_a_Methyltransferase
Cell division protein FtsZ (EC 3.4.24.-)	Cell_Division_Cluster	Bacterial_Cell_Division	Bacterial_Cytoskeleton
Cell division protein GpsB, coordinates the switch between cylindrical and septal cell wall synthesis by re-localization of PBP1	Control_of_cell_elongation_-_division_cycle_in_Bacilli	Cell_Division_Cluster
Cell division protein MraZ	Bacterial_Cell_Division	Bacterial_Cytoskeleton
cell division protein PELOTA	tRNA_modification_Archaea_Henri
Cell division protein ZipA	Bacterial_Cytoskeleton
Cell division topological specificity factor MinE	Bacterial_Cell_Division	Bacterial_Cytoskeleton
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)	Bacterial_Cell_Division	CBSS-393121.3.peg.2760	Heat_shock_Cell_division_Proteases_and_a_Methyltransferase
Cell division trigger factor (EC 5.2.1.8)	Bacterial_Cell_Division
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F1 (as in PMID19099556)	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2 (as in PMID19099556)	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F4 (as in PMID19099556)	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M (as in PMID19099556)	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556)	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators
Cell envelope-bound metalloprotease, Camelysin (EC 3.4.24.-)	Bacillus_biofilm_matrix_protein_component_TasA_and_homologs
cell invasion protein SipB	Salmonella_invasion_locus	CBSS-243265.1.peg.3592
Cell invasion protein sipC (Effector protein SipC)	Salmonella_invasion_locus
Cell invasion protein SipD (Salmonella invasion protein D)	Salmonella_invasion_locus	CBSS-243265.1.peg.3592
Cellobiose phosphotransferase system YdjC-like protein	Beta-Glucoside_Metabolism
Cell-shape determining protein MreBH	Bacterial_Cytoskeleton
Cell surface protein IsdA1	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC	Sortase	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Cell surface protein Shp, transfers heme from hemoglobin to apo-SiaA/HtsA	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Cell surface receptor IsdB for hemoglobin and hemoglobin-haptoglobin complexes	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Cell surface receptor IsdH for hemoglobin-haptoglobin complexes	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Cell wall-associated murein hydrolase LytA	Fratricide_in_Streptococcus
Cell wall-associated murein hydrolase LytC	Fratricide_in_Streptococcus
Cell wall surface anchor family protein	Sortase
Cell wall surface anchor family protein, FPXTG motif	Sortase
Cell wall surface anchor family protein, LPXTG motif	Sortase
Cephalosporin hydroxylase	ZZ_gjo_need_homes
CFA/I fimbrial auxiliary subunit	Colonization_factor_antigen_I_fimbriae
CFA/I fimbrial chaperone	Colonization_factor_antigen_I_fimbriae
CFA/I fimbrial major subunit	Colonization_factor_antigen_I_fimbriae
CFA/I fimbrial minor adhesin	Colonization_factor_antigen_I_fimbriae
CFA/I fimbrial subunit C usher protein	Colonization_factor_antigen_I_fimbriae
Chalcone--flavonone isomerase (EC 5.5.1.6)	Flavanone_biosynthesis
Chalcone synthase (EC 2.3.1.74)	Flavanone_biosynthesis
chaperone FimC	Type_1_pili_(mannose-sensitive_fimbriae)
Chaperone HdeA	Periplasmic_Acid_Stress_Response_in_Enterobacteria
Chaperone HdeB	Periplasmic_Acid_Stress_Response_in_Enterobacteria
Chaperone-modulator protein CbpM	Protein_chaperones
Chaperone protein DnaJ	Heat_shock_dnaK_gene_cluster_extended	Protein_chaperones
Chaperone protein DnaK	Heat_shock_dnaK_gene_cluster_extended	Protein_chaperones
Chaperone protein HscA	Fe-S_cluster_assembly	Protein_chaperones	tRNA_modification_Bacteria	Glutaredoxins
Chaperone protein HscB	Flavohaemoglobin	Fe-S_cluster_assembly	Protein_chaperones	tRNA_modification_Bacteria	Glutaredoxins
Chaperone protein HtpG	Protein_chaperones
Chaperone protein SicA (Salmonella invasin chaperone)	Salmonella_invasion_locus
Chaperonin (heat shock protein 33)	Streptococcus_pyogenes_recombinatorial_zone
Chemotaxis protein CheC -- inhibitor of MCP methylation	Bacterial_Chemotaxis	CBSS-323850.3.peg.3142
Chemotaxis protein CheD	Bacterial_Chemotaxis
Chemotaxis protein CheV (EC 2.7.3.-)	Bacterial_Chemotaxis	Motility_of_Campylobacter
Chemotaxis protein CheX	Bacterial_Chemotaxis
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)	Bacterial_Chemotaxis
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	Bacterial_Chemotaxis	Two-component_regulatory_systems_in_Campylobacter	Motility_of_Campylobacter	C_jejuni_colonization_of_chick_caeca
Chemotaxis response - phosphatase CheZ	Bacterial_Chemotaxis
Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61)	Bacterial_Chemotaxis
Chitinase (EC 3.2.1.14)	Chitin_and_N-acetylglucosamine_utilization
Chitin binding protein	Chitin_and_N-acetylglucosamine_utilization
Chitin catabolic cascade sensor histidine kinase ChiS	(GlcNAc)2_Catabolic_Operon
Chitobiose phosphorylase (EC 2.4.1.-)	(GlcNAc)2_Catabolic_Operon
Chitobiose-specific 6-phospho-beta-glucosidase ChbF (EC 3.2.1.86)	Chitin_and_N-acetylglucosamine_utilization
Chitobiose-specific regulator ChbR, AraC family	Chitin_and_N-acetylglucosamine_utilization
Chitodextrinase precursor (EC 3.2.1.14)	Chitin_and_N-acetylglucosamine_utilization
ChlD component of cobalt chelatase involved in B12 biosynthesis	Coenzyme_B12_biosynthesis
ChlI component of cobalt chelatase involved in B12 biosynthesis	Coenzyme_B12_biosynthesis
Chlorocatechol 1,2-dioxygenase	Chloroaromatic_degradation_pathway
Chlorogenate esterase	Phenylpropanoid_compound_degradation
Chlorophyll a(b) binding protein, photosystem II CP43 protein (PsbC) homolog	Transport_of_Iron	Photosystem_II
Chlorophyll a, chlorophyllide a oxygenase (EC 1.14.13.-)	Chlorophyll_Biosynthesis
Chlorophyllase (EC 3.1.1.14)	Chlorophyll_Degradation
Chlorophyll a synthase ChlG (EC 2.5.1.62)	Chlorophyll_Biosynthesis
Chlorophyllide reductase subunit BchX (EC 1.18.-.-)	Chlorophyll_Biosynthesis
Chlorophyllide reductase subunit BchY (EC 1.18.-.-)	Chlorophyll_Biosynthesis
Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)	Chlorophyll_Biosynthesis
chloroplast NADH dehydrogenase ND4	Respiratory_Complex_I
Chlorosome protein A	Chlorosome
Chlorosome protein B	Chlorosome
Chlorosome protein C	Chlorosome
Chlorosome protein D	Chlorosome
Chlorosome protein E	Chlorosome
Chlorosome protein F	Chlorosome
Chlorosome protein H	Chlorosome
Chlorosome protein I, 2Fe-2S ferredoxin	Chlorosome
Chlorosome protein J, 2Fe-2S ferredoxin	Chlorosome
Chlorosome protein X	Chlorosome
Choline ABC transporter ATP-binding protein	Choline_Transport
Choline ABC transporter permease protein	Choline_Transport
Choline ABC transport system, ATP-binding protein OpuBA	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Choline-binding lipoprotein	Choline_Transport
Choline binding protein A	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Choline binding protein D	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Fratricide_in_Streptococcus
Choline dehydrogenase (EC 1.1.99.1)	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Choline kinase (EC 2.7.1.32)	Phosphorylcholine_incorporation_in_LPS
Choline permease LicB	Phosphorylcholine_incorporation_in_LPS
Cholinephosphate cytidylyltransferase (EC 2.7.7.15)	Phosphorylcholine_incorporation_in_LPS
Choline-sulfatase (EC 3.1.6.6)	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Sulfatases_and_sulfatase_modifying_factor_1	Choline_Transport
Chondroitinase (chondroitin lyase)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Chorismate mutase (EC 5.4.99.5)	Phenylalanine_synthesis
Chorismate mutase I (EC 5.4.99.5)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate_Synthesis
Chorismate mutase II (EC 5.4.99.5)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate_Synthesis
Chorismate mutase III (EC 5.4.99.5)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate_Synthesis
Chorismate--pyruvate lyase (EC 4.1.3.40)	Ubiquinone_Biosynthesis
Chorismate synthase (EC 4.2.3.5)	Chorismate_Synthesis	YgfZ	Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	CBSS-584.1.peg.2497
Chromosomal replication initiator protein DnaA	CBSS-354.1.peg.1756	DNA-replication
Chromosome partitioning protein parA	Bacterial_Cell_Division
Chromosome partition protein MukB	MukBEF_Chromosome_Condensation	DNA_structural_proteins,_bacterial
Chromosome partition protein MukE	MukBEF_Chromosome_Condensation	DNA_structural_proteins,_bacterial
Chromosome partition protein MukF	MukBEF_Chromosome_Condensation	DNA_structural_proteins,_bacterial
Chromosome partition protein smc	Two_cell_division_clusters_relating_to_chromosome_partitioning
Chromosome (plasmid) partitioning protein ParA	Two_cell_division_clusters_relating_to_chromosome_partitioning	CBSS-335283.3.peg.454	CBSS-205914.5.peg.1403	Plasmid_replication	Bacterial_Cytoskeleton
Chromosome (plasmid) partitioning protein ParB	Two_cell_division_clusters_relating_to_chromosome_partitioning	Plasmid_replication	Bacterial_Cytoskeleton
Chromosome replication initiation protein dnaD	Control_of_cell_elongation_-_division_cycle_in_Bacilli
CidA-associated membrane protein CidB	Murein_hydrolase_regulation_and_cell_death
CI-like repressor [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
CI-like repressor, superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
cinnamoyl-CoA:NADP+ oxidoreductase (E.C. 1.2.1.44)	Suberine_biosynthesis
Cinnamoyl-CoA reductase (EC 1.2.1.44)	Lignine_biosynthesis	Caffeic_acid_derivatives
Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195)	Lignine_biosynthesis	Suberine_biosynthesis
Circadian clock protein KaiA	Cyanobacterial_Circadian_Clock
Circadian clock protein KaiC	Cyanobacterial_Circadian_Clock
Circadian input kinase A	Cyanobacterial_Circadian_Clock
Circadian oscillation regulator KaiB	Cyanobacterial_Circadian_Clock
Circadian period extender Pex	Cyanobacterial_Circadian_Clock
Circadian phase modifier	Cyanobacterial_Circadian_Clock
Cirhin	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Citrate lyase alpha chain (EC 4.1.3.6)	Citrate_Metabolism,_Transport,_and_Regulation	TCA_Cycle
Citrate lyase beta chain (EC 4.1.3.6)	Citrate_Metabolism,_Transport,_and_Regulation	TCA_Cycle
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	Citrate_Metabolism,_Transport,_and_Regulation
Citrate lyase transcriptional regulator citI	Citrate_Metabolism,_Transport,_and_Regulation
[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	Citrate_Metabolism,_Transport,_and_Regulation	TCA_Cycle
Citrate Succinate antiporter	Citrate_Metabolism,_Transport,_and_Regulation
Citrate Succinate antiporter (TC 2.A.47.3.2)	Citrate_Metabolism,_Transport,_and_Regulation
Citrate synthase (EC 2.3.3.1)	Glyoxylate_Synthesis	Serine-glyoxylate_cycle
Citrate synthase, mitochondrial precursor (EC 2.3.3.1)	Glyoxylate_bypass	Glyoxylate_Synthesis
Citrate synthase (si) (EC 2.3.3.1)	Biogenesis_of_c-type_cytochromes	Glyoxylate_bypass	TCA_Cycle	Glyoxylate_Synthesis	Serine-glyoxylate_cycle
Citronellol and citronellal dehydrogenase	Acyclic_terpenes_utilization
Citronellyl-CoA dehydrogenase	Acyclic_terpenes_utilization
clavaldehyde dehydrogenase	Clavulanic_acid_biosynthesis
Clock-associated two-component sensor histidine kinase SasA	Cyanobacterial_Circadian_Clock
Clostridial MutS2-related protein	DNA_repair,_bacterial_MutL-MutS_system
Clostridium cellulosome enzyme, dockerin type I precursor	Cellulosome
ClpB protein	Protein_chaperones	Proteolysis_in_bacteria,_ATP-dependent	Type_VI_secretion_systems
ClpXP protease specificity-enhancing factor	Proteolysis_in_bacteria,_ATP-dependent
Clumping factor ClfA, fibrinogen-binding protein	Adhesins_in_Staphylococcus
Clumping factor ClfB, fibrinogen binding protein	Adhesins_in_Staphylococcus
CMP-Kdo synthetase, KpsU	Capsular_Polysaccharides_Biosynthesis_and_Assembly
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase (EC 2.4.99.-)	Sialic_Acid_Metabolism
CoA-acylating propionaldehyde dehydrogenase	Propanediol_utilization	Fermentations:_Mixed_acid	Fermentations:_Lactate
Co-activator of prophage gene expression IbrA	IbrA_and_IbrB:_co-activators_of_prophage_gene_expression
Co-activator of prophage gene expression IbrB	IbrA_and_IbrB:_co-activators_of_prophage_gene_expression
Coagulation factor IXa, protease S01.214	Coagulation_cascade
Coagulation factor V	Coagulation_cascade
Coagulation factor VIIa, protease S01.215	Coagulation_cascade
Coagulation factor VIII	Coagulation_cascade
Coagulation factor Xa, protease S01.216	Coagulation_cascade
Coagulation factor XIa, protease S01.213	Coagulation_cascade
Coagulation factor XIIa, protease S01.211	Coagulation_cascade
Coagulation factor XIII, protein-glutamine gamma-glutamyltransferase (EC 2.3.2.13)	Coagulation_cascade
Cobalamin biosynthesis protein BluB	Cobalamin_synthesis
Cobalamin biosynthesis protein CbiG	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Cobalamin biosynthesis protein CobG	Coenzyme_B12_biosynthesis
Cobalamine-related hypothetical metal-binding protein CrdX	Coenzyme_B12_biosynthesis
Cobalamin synthase	Heme_and_Siroheme_Biosynthesis	Cobalamin_synthesis	Experimental_tye	Coenzyme_B12_biosynthesis
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Cobalt-precorrin-3b C17-methyltransferase	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Cobalt-precorrin-6 synthase, anaerobic	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Cobalt-precorrin-6x reductase (EC 1.3.1.54)	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	Coenzyme_B12_biosynthesis
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	Coenzyme_B12_biosynthesis
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family	Cobalt-zinc-cadmium_resistance
Cobalt-zinc-cadmium resistance protein	Cobalt-zinc-cadmium_resistance	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Cobalt-zinc-cadmium resistance protein CzcA	Cobalt-zinc-cadmium_resistance
Cobalt-zinc-cadmium resistance protein CzcD	Cobalt-zinc-cadmium_resistance
CoB--CoM heterodisulfide reductase 2 iron-sulfur subunit D (EC 1.8.98.1)	Anaerobic_respiratory_reductases
CoB--CoM heterodisulfide reductase 2 subunit E (EC 1.8.98.1)	Anaerobic_respiratory_reductases
CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	Methanogenesis	Anaerobic_respiratory_reductases	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	Methanogenesis	Anaerobic_respiratory_reductases	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	Methanogenesis	Anaerobic_respiratory_reductases	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)	Anaerobic_respiratory_reductases
CoB--CoM-reducing hydrogenase (Cys) alpha subunit	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM-reducing hydrogenase (Cys) beta subunit	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM-reducing hydrogenase (Cys) delta subunit	Anaerobic_respiratory_reductases	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM-reducing hydrogenase (Cys) gamma subunit	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM-reducing hydrogenase (Sec) alpha subunit	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM-reducing hydrogenase (Sec) alpha' subunit	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM-reducing hydrogenase (Sec) beta subunit	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM-reducing hydrogenase (Sec) delta subunit	H2:CoM-S-S-HTP_oxidoreductase
CoB--CoM-reducing hydrogenase (Sec) gamma subunit	H2:CoM-S-S-HTP_oxidoreductase
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)	Coenzyme_B12_biosynthesis
Cob(II)alamin reductase	Propanediol_utilization	Coenzyme_B12_biosynthesis
Cob(III)alamin reductase	Propanediol_utilization
CobN component of cobalt chelatase involved in B12 biosynthesis	Coenzyme_B12_biosynthesis
CobW GTPase involved in cobalt insertion for B12 biosynthesis	Coenzyme_B12_biosynthesis
Cobyric acid synthase	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
Cobyrinic acid A,C-diamide synthase	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
CO dehydrogenase accessory protein CooC (nickel insertion)	Carbon_monoxide_induced_hydrogenase
CO dehydrogenase/acetyl-CoA synthase, acetyl-CoA synthase subunit (EC 2.3.1.169)	Carbon_monoxide_induced_hydrogenase
CO dehydrogenase/acetyl-CoA synthase, CO dehydrogenase subunit (EC 1.2.99.2)	Carbon_monoxide_induced_hydrogenase
CO dehydrogenase/acetyl-CoA synthase subunit alpha, CO dehydrogenase subcomplex (EC 1.2.99.2)	Carbon_monoxide_induced_hydrogenase
CO dehydrogenase/acetyl-CoA synthase subunit beta, acetyl-CoA synthase (EC 2.3.1.169)	Carbon_monoxide_induced_hydrogenase
CO dehydrogenase/acetyl-CoA synthase subunit delta, corrinoid iron-sulfur subcomplex small subunit	Carbon_monoxide_induced_hydrogenase
CO dehydrogenase/acetyl-CoA synthase subunit epsilon, CO dehydrogenase subcomplex (EC 1.2.99.2)	Carbon_monoxide_induced_hydrogenase
CO dehydrogenase/acetyl-CoA synthase subunit gamma, corrinoid iron-sulfur subcomplex large subunit	Carbon_monoxide_induced_hydrogenase
CO dehydrogenase iron-sulfur protein CooF (EC 1.2.99.2)	Carbon_monoxide_induced_hydrogenase
CO dehydrogenases maturation factor, CoxF family	CO_Dehydrogenase
Coenzyme B synthesis from 2-oxoglutarate: steps 1, 6, and 10	Coenzyme_B_synthesis
Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 [large subunit]	Coenzyme_B_synthesis
Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 [small subunit]	Coenzyme_B_synthesis
Coenzyme B synthesis from 2-oxoglutarate: steps 5, 9, and 13	Coenzyme_B_synthesis
Coenzyme F420-0:L-glutamate ligase	Coenzyme_F420_synthesis
Coenzyme F420-1:L-glutamate ligase	Coenzyme_F420_synthesis
Coenzyme F420-dependent oxidoreductase	Anaerobic_respiratory_reductases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoA	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoB	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoC	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoD	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoF	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoH	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoI	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoJ	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoJ2	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoK	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoL	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoM	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoN	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoO	Coenzyme_F420-H2_dehydrogenase_(methanophenazine)	Mebrane_bound_hydrogenases
Coenzyme F420 hydrogenase alpha subunit (FrcA) (EC 1.12.98.1)	NiFe_hydrogenase_maturation	Coenzyme_F420_hydrogenase
Coenzyme F420 hydrogenase alpha subunit (FruA) (EC 1.12.98.1)	NiFe_hydrogenase_maturation	Coenzyme_F420_hydrogenase
Coenzyme F420 hydrogenase beta subunit (FrcB) (EC 1.12.98.1)	Coenzyme_F420_hydrogenase
Coenzyme F420 hydrogenase beta subunit (FruB) (EC 1.12.98.1)	Hydrogenases	Coenzyme_F420_hydrogenase
Coenzyme F420 hydrogenase gamma subunit (FrcG) (EC 1.12.98.1)	Coenzyme_F420_hydrogenase
Coenzyme F420 hydrogenase gamma subunit (FruG) (EC 1.12.98.1)	Coenzyme_F420_hydrogenase
Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	Hydrogenases	Coenzyme_F420_hydrogenase
Coenzyme F420-reducing hydrogenase, alpha subunit	Hydrogenases
Coenzyme F420-reducing hydrogenase, beta subunit	Hydrogenases
Coenzyme F420-reducing hydrogenase, gamma subunit	Hydrogenases
Coenzyme gamma-F420-2:L-glutamate ligase	Coenzyme_F420_synthesis
Coenzyme PQQ synthesis protein A	Pyrroloquinoline_Quinone_biosynthesis	Coenzyme_PQQ_synthesis
Coenzyme PQQ synthesis protein B	Pyrroloquinoline_Quinone_biosynthesis	Coenzyme_PQQ_synthesis
Coenzyme PQQ synthesis protein C	Pyrroloquinoline_Quinone_biosynthesis	Coenzyme_PQQ_synthesis
Coenzyme PQQ synthesis protein D	Pyrroloquinoline_Quinone_biosynthesis	Coenzyme_PQQ_synthesis
Coenzyme PQQ synthesis protein E	Pyrroloquinoline_Quinone_biosynthesis	YgfZ	Coenzyme_PQQ_synthesis
Coenzyme PQQ synthesis protein F (EC 3.4.99.-)	Pyrroloquinoline_Quinone_biosynthesis	Coenzyme_PQQ_synthesis
Cof protein, HD superfamily hydrolase	Housecleaning_nucleoside_triphosphate_pyrophosphatases
COG0488: ATPase components of ABC transporters with duplicated ATPase domains	Folate_Biosynthesis
COG0523: Putative GTPases (G3E family)	Zinc_regulated_enzymes	Transport_of_Zinc	CBSS-350701.3.peg.3277
COG0536: GTP-binding protein Obg	CBSS-176279.3.peg.868	Universal_GTPases
COG0613, Predicted metal-dependent phosphoesterases (PHP family)	tRNA_modification_Bacteria	YrdC-YciO
COG0779: clustered with transcription termination protein NusA	NusA-TFII_Cluster	Transcription_factors_bacterial
COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like	tRNA_modification_Archaea
COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP	tRNA_modification_Archaea
COG1323: Predicted nucleotidyltransferase	CBSS-269801.1.peg.1715
COG1355, Predicted dioxygenase	tRNA_modification_Archaea
COG1496: Uncharacterized conserved protein	tRNA_modification_Bacteria	CBSS-188.1.peg.9880
COG1537: Predicted RNA-binding proteins	tRNA_modification_Archaea
COG1559 protein YceG like	CBSS-198215.1.peg.1051	CBSS-281090.3.peg.464	tRNA_modification_Bacteria	CBSS-323097.3.peg.2594
COG1565: Uncharacterized conserved protein	Pterin_metabolism_3	CBSS-188.1.peg.9880
COG1720: Uncharacterized conserved protein	tRNA_modification_Archaea
COG1821 family protein	Methanopterin_biosynthesis2
COG1887: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC	Teichoic_and_lipoteichoic_acids_biosynthesis
COG2047: Uncharacterized protein (ATP-grasp superfamily)	tRNA_modification_Archaea
COG2071: predicted glutamine amidotransferases in hypothetical Actinobacterial gene cluster	CBSS-262316.1.peg.2929
COG2078: Uncharacterized ACR	tRNA_modification_Archaea
COG2117: Predicted ATPase of the PP-loop superfamily	tRNA_modification_Archaea
COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	NusA-TFII_Cluster	Transcription_factors_bacterial
COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases	YjeE
COG3269, Predicted RNA-binding protein, contains TRAM domain	rRNA_modification	tRNA_modification_Archaea	rRNA_modification_Archaea
COGs COG3146	Pterin_metabolism_3	Pterin_metabolism	CBSS-176299.4.peg.1996
Colanic acid biosynthesis acetyltransferase wcaB (EC 2.3.1.-)	Colanic_acid_biosynthesis
Colanic acid biosynthesis acetyltransferase wcaF (EC 2.3.1.-)	Colanic_acid_biosynthesis
Colanic acid biosynthesis glycosyl transferase wcaA	Colanic_acid_biosynthesis
Colanic acid biosynthesis glycosyl transferase wcaC	Colanic_acid_biosynthesis
Colanic acid biosynthesis glycosyl transferase wcaE	Colanic_acid_biosynthesis
Colanic acid biosynthesis glycosyl transferase wcaL	Colanic_acid_biosynthesis
Colanic acid biosynthsis UDP-glucose lipid carrier transferase wcaJ	Colanic_acid_biosynthesis
Colanic acid biosysnthesis glycosyl transferase wcaI	Colanic_acid_biosynthesis
Colanic acid biosysnthesis protein wcaK	Colanic_acid_biosynthesis
Colanic acid capsular biosynthesis activation accesory protein RcsA, co-regulator with RcsB	Rcs_phosphorelay_signal_transduction_pathway
Colanic acid polymerase wcaD	Colanic_acid_biosynthesis
Cold-shock DEAD-box protein A	ATP-dependent_RNA_helicases,_bacterial
Cold shock protein CspA	Cold_shock,_CspA_family_of_proteins
Cold shock protein CspB	Cold_shock,_CspA_family_of_proteins
Cold shock protein CspC	Cold_shock,_CspA_family_of_proteins
Cold shock protein CspD	Cold_shock,_CspA_family_of_proteins
Cold shock protein CspE	Cold_shock,_CspA_family_of_proteins
Cold shock protein CspF	Cold_shock,_CspA_family_of_proteins
Cold shock protein CspG	Cold_shock,_CspA_family_of_proteins
Cold shock protein CspH	Cold_shock,_CspA_family_of_proteins
Cold shock protein CspI	Cold_shock,_CspA_family_of_proteins
Colicin I receptor precursor	Ton_and_Tol_transport_systems
Colicin V production protein	Colicin_V_and_Bacteriocin_Production_Cluster
Collagen alpha 1(I) chain precursor	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Collagen-binding adhesin	Streptococcus_pyogenes_recombinatorial_zone
Collagen binding protein Cna	Adhesins_in_Staphylococcus
Collagen-like surface protein	Streptococcus_pyogenes_Virulome
ComF operon protein A, DNA transporter ATPase	Gram_Positive_Competence	gram_plus_late_competence	Late_competence
ComF operon protein C	Gram_Positive_Competence	gram_plus_late_competence	Late_competence
ComM-related protein	CBSS-203122.12.peg.188
Competence/damage-inducible protein CinA	CBSS-257314.1.peg.676	Competence_or_DNA_damage-inducible_protein_CinA_and_related_protein_families	Yfa_cluster
Competence/damage-inducible protein CinA family	Competence_or_DNA_damage-inducible_protein_CinA_and_related_protein_families
Competence/damage-inducible protein CinA family, archaeal branch	Competence_or_DNA_damage-inducible_protein_CinA_and_related_protein_families
Competence positive regulator ComW	Competence_in_Streptococci
Competence protein CoiA	Gram_Positive_Competence
Competence protein F	CBSS-216591.1.peg.168	Glutaredoxins
Competence protein PilO	Type_IV_pilus
Competence protein PilW	Type_IV_pilus
Competence-specific sigma factor ComX	Competence_in_Streptococci
Competence-stimulating peptide ABC transporter ATP-binding protein ComA	Competence_in_Streptococci
Competence-stimulating peptide ABC transporter permease protein ComB	Competence_in_Streptococci
Competence-stimulating peptide (CSP) precursor ComC	Competence_in_Streptococci
Complement component 1, Q subcomponent binding protein, mitochondrial precursor	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Conjugative signal peptidase TrhF	Type_4_secretion_and_conjugative_transfer
Conjugative transfer entry exclusion protein TrbK	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein ELI_00880	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein ELI_04330	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein PSLT087	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein PSLT093	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein s043	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbA	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbB	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbC	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbD	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbE	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbF	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbG	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbH	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbI	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbJ	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbL	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbN	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbO	Type_4_secretion_and_conjugative_transfer
Conjugative transfer protein TrbP (IncF TraX homolog)	Type_4_secretion_and_conjugative_transfer
Conjugative transposon protein TraA	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraB	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraC	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraD	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraE	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraF	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraG	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraH	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraI	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraJ	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraK	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraL	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraM	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraN	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraO	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraP	Conjugative_transposon,_Bacteroidales
Conjugative transposon protein TraQ	Conjugative_transposon,_Bacteroidales
Conjugative transposon transfer DNA helicase	DNA_repair,_bacterial_UvrD_and_related_helicases
Conserved ATP-binding protein YghS	Conserved_cluster_around_inner_membrane_protein_gene_yghQ,_probably_involved_in_polysaccharide_biosynthesis
Conserved domain protein in cluster with two glycosyl transferases	Exopolysaccharide_Biosynthesis
conserved hypothetical membrane protein, paralogue of Y20848	CBSS-205922.3.peg.1809
conserved hypothetical protein in cyt c oxidase gene clusters	CBSS-316057.3.peg.563
Conserved hypothetical protein (perhaps related to histidine degradation)	Histidine_Degradation
Conserved hypothetical protein potentially related to ribose or hydroxymethylpyrimidine metabolism	CBSS-479435.4.peg.2736
Conserved hypothetical protein probably involved in assimilatory sulfate reduction	Inorganic_Sulfur_Assimilation
Conserved hypothetical protein probably involved in sulfate reduction	Inorganic_Sulfur_Assimilation
conserved hypothetical protein [Pyrococcus horikoshii]; COG2102: Predicted ATPases of PP-loop superfamily; IPR002761: Domain of unknown function DUF71	tRNA_modification_Archaea
Conserved hypothetical TPR repeat protein, clustered with yghQ	Conserved_cluster_around_inner_membrane_protein_gene_yghQ,_probably_involved_in_polysaccharide_biosynthesis
Conserved oligomeric Golgi complex component 8	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
conserved protein associated with acetyl-CoA C-acyltransferase	Ketoisovalerate_oxidoreductase
Conserved protein LiaG in B. subtilis in Lia cluster	Bacitracin_Stress_Response
conserved protein with predicted RNA binding PUA domain	rRNA_modification	tRNA_modification_Archaea	rRNA_modification_Archaea	tRNA_modification_Archaea_Henri
Conserved protein YghR, with nucleoside triphosphate hydrolase domain	Conserved_cluster_around_inner_membrane_protein_gene_yghQ,_probably_involved_in_polysaccharide_biosynthesis
Conserved protein YghT, with nucleoside triphosphate hydrolase domain	Conserved_cluster_around_inner_membrane_protein_gene_yghQ,_probably_involved_in_polysaccharide_biosynthesis
Conserved protein YqhG	CBSS-288681.3.peg.1039
Conserved uncharacterized protein CreA	Tolerance_to_colicin_E2
CooJ	Carbon_monoxide_induced_hydrogenase
CooT	Carbon_monoxide_induced_hydrogenase
copalyl diphosphate synthase (CPS) (ent-kaurene synthetase A)	Phytoalexin_biosynthesis
CopG protein	Copper_homeostasis
Copper-binding periplasmic protein	Copper_homeostasis
Copper chaperone	Copper_homeostasis
Copper-containing nitrite reductase (EC 1.7.2.1)	Denitrification	Terminal_cytochrome_C_oxidases
Copper homeostasis protein CutE	Copper_homeostasis:_copper_tolerance
Copper homeostasis protein CutF precursor	Copper_homeostasis:_copper_tolerance
Copper ion binding protein	CBSS-196620.1.peg.2477
Copper metallochaperone, bacterial analog of Cox17 protein	Biogenesis_of_cytochrome_c_oxidases
Copper metallochaperone, cytochrome oxidase biogenesis protein Cox17	Biogenesis_of_cytochrome_c_oxidases
Copper resistance protein B	Copper_homeostasis
Copper resistance protein C precursor	Copper_homeostasis
Copper resistance protein D	Copper_homeostasis
Copper-sensing two-component system response regulator CpxR	Orphan_regulatory_proteins
Copper-sensing two-component system response regulator CusR	Orphan_regulatory_proteins	Cobalt-zinc-cadmium_resistance	Copper_homeostasis
Copper sensory histidine kinase CpxA	Orphan_regulatory_proteins
Copper sensory histidine kinase CusS	Orphan_regulatory_proteins	Cobalt-zinc-cadmium_resistance	Copper_homeostasis
Copper tolerance protein	Copper_homeostasis
Copper-translocating P-type ATPase (EC 3.6.3.4)	CBSS-196620.1.peg.2477	Terminal_cytochrome_C_oxidases	Copper_homeostasis
Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	Heme_and_Siroheme_Biosynthesis	Experimental_tye	YgfZ
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative 2	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Core component CbiM of cobalt ECF transporter	Coenzyme_B12_biosynthesis
corresponds to STY3070 from Accession AL513382: Salmonella typhi CT18	CRISPRs	CBSS-216592.1.peg.3534
Corrinoid iron-sulfur protein (large subunit)	Acetyl-CoA_pathway_of_CO2_fixation
Corrinoid iron-sulfur protein (small subunit)	Acetyl-CoA_pathway_of_CO2_fixation
Coupling protein VirD4, ATPase required for T-DNA transfer	Plasmid-encoded_T-DNA_transfer
CpeR homolog, phycoerythrin linker-proteins region	Phycobilisome
CRISPR-associated helicase Cas3	CRISPRs
CRISPR-associated helicase Cas3, protein	CRISPRs	CBSS-216592.1.peg.3534
CRISPR-associated negative autoregulator	CRISPRs
CRISPR-associated protein Cas1	CRISPRs	CBSS-216592.1.peg.3534
CRISPR-associated protein Cas2	CRISPRs
CRISPR-associated protein, Cas2	CBSS-216592.1.peg.3534
CRISPR-associated protein Cas7	CRISPRs
CRISPR-associated protein, Csn1 family	CRISPRs
CRISPR-associated protein, CT1133 family	CRISPRs
CRISPR-associated protein, CT1134 family	CRISPRs
CRISPR-associated protein, CT1972 family	CRISPRs
CRISPR-associated protein, CT1973 family	CRISPRs
CRISPR-associated protein, CT1974	CRISPRs	CBSS-216592.1.peg.3534
CRISPR-associated protein, CT1975 family	CRISPRs	CBSS-216592.1.peg.3534
CRISPR-associated protein, CT1976	CRISPRs	CBSS-216592.1.peg.3534
CRISPR-associated protein, MJ0381 family	CRISPRs
CRISPR-associated protein MTH1087	CRISPRs
CRISPR-associated protein, SAG0894 family	CRISPRs
CRISPR-associated protein, TM1800 family	CRISPRs
CRISPR-associated protein, TM1801 family	CRISPRs
CRISPR-associated protein, TM1802 family	CRISPRs
CRISPR-associated protein, WS1616 family	CRISPRs
CRISPR-associated RecB family exonuclease Cas4a	CRISPRs
CRISPR-associated RecB family exonuclease Cas4b	CRISPRs
Cro-like repressor [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Cro-like repressor, superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Crossover junction endodeoxyribonuclease ruvC (EC 3.1.22.4)	RuvABC_plus_a_hypothetical	DNA-replication
Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)	carnitine_metabolism	Carnitine_Metabolism_in_Microorganisms
Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)	Carnitine_Metabolism_in_Microorganisms
Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)	carnitine_metabolism	Carnitine_Metabolism_in_Microorganisms
crotonyl-CoA reductase	Glyoxylate_bypass	Serine-glyoxylate_cycle
CrtT-methyltransferase-like protein	Carotenoids
CrtV-methyltransferase-like protein	Carotenoids
C-terminal binding protein 2	Redox-dependent_regulation_of_nucleus_processes
CTP-dependent archaeal riboflavin kinase	riboflavin_to_FAD	Riboflavin,_FMN_and_FAD_metabolism
CTP:Inositol-1-phosphate cytidylyltransferase (2.7.7.-)	Di-Inositol-Phosphate_biosynthesis
CTP synthase (EC 6.3.4.2)	pyrimidine_conversions
Cu(I)-responsive transcriptional regulator	Copper_homeostasis
Curli production assembly/transport component CsgE	Curli_production
Curli production assembly/transport component CsgF	Curli_production
Curli production assembly/transport component CsgG	Curli_production
Cyanate ABC transporter, ATP-binding protein	Cyanate_hydrolysis
Cyanate ABC transporter, permease protein	Cyanate_hydrolysis
Cyanate ABC transporter, substrate binding protein	Cyanate_hydrolysis
Cyanate hydratase (EC 4.2.1.104)	Cyanate_hydrolysis
Cyanate transport protein cynX	Cyanate_hydrolysis
Cyanobacteria-specific RpoD-like sigma factor, type-1	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-10	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-11	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-12	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-13	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-14	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-15	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-16	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-2	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-3	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-4	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-5	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-6	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-7	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-8	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanobacteria-specific RpoD-like sigma factor, type-9	Transcription_factors_cyanobacterial_RpoD-like_sigma_factors
Cyanoglobin	Bacterial_hemoglobins
Cyanophycinase 2 (EC 3.4.15.6)	Cyanophycin_Metabolism
Cyanophycinase (EC 3.4.15.6)	Cyanophycin_Metabolism
Cyanophycinase (EC 3.4.15.6) dimer	Cyanophycin_Metabolism
Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30)	Cyanophycin_Metabolism
Cyanophycin synthase II	Cyanophycin_Metabolism
Cyclic AMP receptor protein	CytR_regulation	cAMP_signaling_in_bacteria	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Cyclic beta-1,2-glucan modification transmembrane protein	Synthesis_of_osmoregulated_periplasmic_glucans
Cyclic beta-1,2-glucan synthase (EC 2.4.1.-)	Synthesis_of_osmoregulated_periplasmic_glucans
Cyclin G1	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate
Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate_Synthesis
cyclolysin-activating lysine-acyltransferase	cAMP_signaling_in_bacteria
cyclolysin secretion ATP-binding protein	cAMP_signaling_in_bacteria
cyclolysin secretion protein	cAMP_signaling_in_bacteria
Cyclomaltodextrin glucanotransferase (EC 2.4.1.19)	Alpha-Amylase_locus_in_Streptocococcus
Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79)	CBSS-291331.3.peg.3674
Cyn operon transcriptional activator	DNA-binding_regulatory_proteins,_strays	Cyanate_hydrolysis
CysQ, putative	CBSS-164757.7.peg.5020
Cys regulon transcriptional activator CysB	DNA-binding_regulatory_proteins,_strays	Cysteine_Biosynthesis
Cystathionine beta-lyase (EC 4.4.1.8)	Methionine_Biosynthesis
Cystathionine beta-lyase, type II (EC 4.4.1.8)	Methionine_Biosynthesis
Cystathionine beta-synthase (EC 4.2.1.22)	Cysteine_Biosynthesis	Methionine_Degradation	Glycine_and_Serine_Utilization	Methionine_Biosynthesis
Cystathionine gamma-lyase (EC 4.4.1.1)	Cysteine_Biosynthesis	Methionine_Degradation	Glycine_and_Serine_Utilization	Methionine_Biosynthesis
Cystathionine gamma-synthase (EC 2.5.1.48)	Methionine_Biosynthesis
Cysteine desulfurase (EC 2.8.1.7)	tRNA_modification_yeast_cytoplasmic	Fe-S_cluster_assembly	CBSS-84588.1.peg.1247	Alanine_biosynthesis	tRNA_modification_Archaea	tRNA_modification_Bacteria	mcm5s2U_biosynthesis_in_tRNA	YgfZ	mnm5U34_biosynthesis_bacteria	CBSS-393130.3.peg.794
Cysteine synthase A (EC 2.5.1.47)	Cysteine_Biosynthesis
Cysteine synthase B (EC 2.5.1.47)	Cysteine_Biosynthesis
Cysteine synthase (EC 2.5.1.47)	Cysteine_Biosynthesis	Methionine_Biosynthesis
Cysteinyl-tRNA synthetase (EC 6.1.1.16)	Zinc_regulated_enzymes	tRNA_aminoacylation	Conserved_gene_cluster_possibly_involved_in_RNA_metabolism
Cysteinyl-tRNA synthetase (EC 6.1.1.16), mitochondrial	tRNA_aminoacylation,_mitochondrial
Cysteinyl-tRNA synthetase related protein	CBSS-261594.1.peg.788
Cytidine deaminase (EC 3.5.4.5)	pyrimidine_conversions	tRNA_modification_Bacteria	Murein_hydrolase_regulation_and_cell_death
Cytidylate kinase (EC 2.7.4.14)	pyrimidine_conversions
cytochrome b-5	Soluble_cytochromes_and_functionally_related_electron_carriers
Cytochrome b559 alpha chain (PsbE)	Photosystem_II
Cytochrome b559 beta chain (PsbF)	Photosystem_II
Cytochrome b6-f complex alternative Rieske iron sulfur protein PetC2	Cytochrome_B6-F_complex
Cytochrome b6-f complex alternative Rieske iron sulfur protein PetC3	Cytochrome_B6-F_complex
Cytochrome b6-f complex iron-sulfur subunit PetC1 (Rieske iron sulfur protein EC 1.10.99.1)	Cytochrome_B6-F_complex
Cytochrome b6-f complex subunit, apocytochrome f	Cytochrome_B6-F_complex
Cytochrome b6-f complex subunit, cytochrome b6	Cytochrome_B6-F_complex
Cytochrome b6-f complex subunit IV (PetD)	Cytochrome_B6-F_complex
Cytochrome b6-f complex subunit VIII (PetN)	Cytochrome_B6-F_complex
Cytochrome b6-f complex subunit VII (PetM)	Cytochrome_B6-F_complex
Cytochrome b6-f complex subunit VI (PetL)	Cytochrome_B6-F_complex
Cytochrome b6-f complex subunit V (PetG)	Cytochrome_B6-F_complex
Cytochrome C1 heme lyase CCHL (EC 4.4.1.17)	Biogenesis_of_c-type_cytochromes
Cytochrome c2	Soluble_cytochromes_and_functionally_related_electron_carriers
cytochrome-c3 hydrogenase alpha chain	Hydrogenases
cytochrome-c3 hydrogenase delta chain	Hydrogenases
cytochrome-c3 hydrogenase gamma chain	Hydrogenases
Cytochrome c4	Soluble_cytochromes_and_functionally_related_electron_carriers
Cytochrome C550 (Soluble cytochrome C)	Soluble_cytochromes_and_functionally_related_electron_carriers
Cytochrome c551/c552	Soluble_cytochromes_and_functionally_related_electron_carriers
Cytochrome c551 NirM	Dissimilatory_nitrite_reductase
Cytochrome c551 peroxidase (EC 1.11.1.5)	Protection_from_Reactive_Oxygen_Species
Cytochrome c552	Soluble_cytochromes_and_functionally_related_electron_carriers
Cytochrome c-552 precursor	Soluble_cytochromes_and_functionally_related_electron_carriers
Cytochrome c552 precursor (EC 1.7.2.2)	Nitrate_and_nitrite_ammonification	Soluble_cytochromes_and_functionally_related_electron_carriers
Cytochrome c553	Soluble_cytochromes_and_functionally_related_electron_carriers
Cytochrome c553-like	Terminal_cytochrome_C_oxidases
Cytochrome C553 (soluble cytochrome f)	Soluble_cytochromes_and_functionally_related_electron_carriers
Cytochrome c55X precursor NirC	Dissimilatory_nitrite_reductase
Cytochrome cd1 nitrite reductase (EC:1.7.2.1)	Dissimilatory_nitrite_reductase	Heme_biosynthesis_orphans	Denitrification
Cytochrome C heme lyase CCHL (EC 4.4.1.17)	Biogenesis_of_c-type_cytochromes
Cytochrome c heme lyase subunit CcmF	Biogenesis_of_c-type_cytochromes	Copper_homeostasis
Cytochrome c heme lyase subunit CcmH	Biogenesis_of_c-type_cytochromes	Copper_homeostasis
Cytochrome c heme lyase subunit CcmL	Biogenesis_of_c-type_cytochromes	Copper_homeostasis
Cytochrome c in methylamine utilization cluster	CBSS-265072.7.peg.546
Cytochrome c nitrite reductase, small subunit NrfH	Nitrate_and_nitrite_ammonification
Cytochrome c oxidase (B(O/a)3-type) chain I (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase (B(O/a)3-type) chain II (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase polypeptide IIA (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase polypeptide IV(EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase polypeptide Va, mitochondrial precursor (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase polypeptide Vb, mitochondrial precursor (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase polypeptide VIa-liver, mitochondrial precursor (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase polypeptide VIIc, mitochondrial precursor (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase subunit 2a (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)	Biogenesis_of_cbb3-type_cytochrome_c_oxidases	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)	Biogenesis_of_cbb3-type_cytochrome_c_oxidases	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase subunit CcoP (EC 1.9.3.1)	Biogenesis_of_cbb3-type_cytochrome_c_oxidases	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1)	Biogenesis_of_cbb3-type_cytochrome_c_oxidases	Terminal_cytochrome_C_oxidases
Cytochrome c oxidase, subunit IV (EC 1.9.3.1)	Terminal_cytochrome_C_oxidases
cytochrome c subunit of flavocytochrome c sulfide dehydrogenase	Sulfur_oxidation
Cytochrome c-type biogenesis protein, archaeal	Biogenesis_of_c-type_cytochromes
Cytochrome c-type biogenesis protein CcdA (DsbD analog)	Biogenesis_of_c-type_cytochromes	Periplasmic_disulfide_interchange	Sulfur_oxidation	Experimental_tye	CBSS-196164.1.peg.461	Peptide_methionine_sulfoxide_reductase
Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase	Peptide_methionine_sulfoxide_reductase
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE	Biogenesis_of_c-type_cytochromes
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE	Biogenesis_of_c-type_cytochromes
Cytochrome c-type biogenesis protein CcmE, heme chaperone	Biogenesis_of_c-type_cytochromes	Copper_homeostasis
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	Biogenesis_of_c-type_cytochromes	Periplasmic_disulfide_interchange	Copper_homeostasis
Cytochrome c-type biogenesis protein Ccs1/ResB	Biogenesis_of_c-type_cytochromes
Cytochrome c-type biogenesis protein CcsA/ResC	Biogenesis_of_c-type_cytochromes	Experimental_tye	CBSS-196164.1.peg.461
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	Biogenesis_of_c-type_cytochromes	Periplasmic_disulfide_interchange
Cytochrome c-type biogenesis protein ResA	Biogenesis_of_c-type_cytochromes
Cytochrome c-type heme lyase CCHL (EC 4.4.1.17)	Biogenesis_of_c-type_cytochromes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly	Nitrate_and_nitrite_ammonification
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly	Nitrate_and_nitrite_ammonification
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly	Nitrate_and_nitrite_ammonification
Cytochrome c-type protein NapC	Nitrate_and_nitrite_ammonification	trimethylamine_N-oxide_(TMAO)_reductase
Cytochrome c-type protein nrfB precursor	Nitrate_and_nitrite_ammonification
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Cytochrome_c_oxidases_d@O_copy	Terminal_cytochrome_d_ubiquinol_oxidases	Terminal_cytochrome_oxidases
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Cytochrome_c_oxidases_d@O_copy	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Terminal_cytochrome_d_ubiquinol_oxidases	Terminal_cytochrome_oxidases	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase
cytochrome d ubiquinol oxidase, subunit II-related protein	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase
Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)	Flavohaemoglobin	Cytochrome_c_oxidases_d@O_copy	Terminal_cytochrome_O_ubiquinol_oxidase	Terminal_cytochrome_oxidases
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)	Flavohaemoglobin	Cytochrome_c_oxidases_d@O_copy	Terminal_cytochrome_O_ubiquinol_oxidase	Terminal_cytochrome_oxidases
Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)	Flavohaemoglobin	Cytochrome_c_oxidases_d@O_copy	Terminal_cytochrome_O_ubiquinol_oxidase	Terminal_cytochrome_oxidases
Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)	Flavohaemoglobin	Cytochrome_c_oxidases_d@O_copy	Terminal_cytochrome_O_ubiquinol_oxidase	Terminal_cytochrome_oxidases
Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1	CBSS-316057.3.peg.563	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Cox14, required for Cox1 assembly	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Cox16	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Cox18, required for translocation of Cox2	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Cox23	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Mba1	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Mss2, required for translocation of Cox2	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Mss51, required for maturation, translation of COX1 mRNA	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Oxa1, translocase of mitochondrial membrane	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Pet100, chaperone	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Pet117	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Pet191	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Pnt1, translocase of mt membrane	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone	Biogenesis_of_cytochrome_c_oxidases
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion	CBSS-316057.3.peg.563	Biogenesis_of_cytochrome_c_oxidases
cytochrome oxidase,subunit I (cydA-1)	Terminal_cytochrome_d_ubiquinol_oxidases
cytochrome P450, putative / go_function: cytochrome P450 activity [goid 0015034]; go_function: oxygen binding [goid 0019825]	Terpen_biosynthesis
Cytolethal distending toxin subunit A	Cytolethal_distending_toxin_of_Campylobacter_jejuni
Cytolethal distending toxin subunit B	Cytolethal_distending_toxin_of_Campylobacter_jejuni
Cytolethal distending toxin subunit C	Cytolethal_distending_toxin_of_Campylobacter_jejuni
Cytolysin and hemolysin, HlyA, Pore-forming toxin	Cytolysin_and_Lipase_operon_in_Vibrio
Cytoplasmic alpha-amylase (EC 3.2.1.1)	Maltose_and_Maltodextrin_Utilization	Glycogen_metabolism
Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	RNA_processing_and_degradation,_bacterial	Bacterial_Cell_Division	CBSS-354.1.peg.2917
Cytoplasmic copper homeostasis protein cutC	Copper_homeostasis:_copper_tolerance
Cytoplasmic protein YaiE	CBSS-562.2.peg.5158_SK3_including
Cytoplasmic trehalase (EC 3.2.1.28)	Trehalose_Uptake_and_Utilization
Cytosine deaminase (EC 3.5.4.1)	pyrimidine_conversions	Creatine_and_Creatinine_Degradation	CBSS-326442.4.peg.1852
Cytosine/purine/uracil/thiamine/allantoin permease family protein	Hydantoin_metabolism	Purine_Utilization
Cytosol aminopeptidase PepA (EC 3.4.11.1)	CBSS-208964.1.peg.3826	Protein_degradation	Dehydrogenase_complexes
cytosolic long-chain acyl-CoA thioester hydrolase family protein	Serine-glyoxylate_cycle
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22)	Polyhydroxybutyrate_metabolism
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	Serine_Biosynthesis	Pyridoxin_(Vitamin_B6)_Biosynthesis	Glycine_and_Serine_Utilization
D-alanine aminotransferase (EC 2.6.1.21)	Aminotransferases:Aromatic_Pathway_and_More,_A_work_in_progress	Pyruvate_Alanine_Serine_Interconversions
D-alanine--D-alanine ligase A (EC 6.3.2.4)	Peptidoglycan_Biosynthesis	Peptidoglycan_Biosynthesis_2
D-alanine--D-alanine ligase B (EC 6.3.2.4)	Peptidoglycan_Biosynthesis	Peptidoglycan_Biosynthesis_2
D-alanine--D-alanine ligase (EC 6.3.2.4)	Peptidoglycan_Biosynthesis	Peptidoglycan_Biosynthesis_2
D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13)	Teichoic_and_lipoteichoic_acids_biosynthesis	D-Alanyl_Lipoteichoic_Acid_Biosynthesis	Streptococcus_pyogenes_Virulome	Methicillin_resistance_in_Staphylococci
D-alanine--poly(phosphoribitol) ligase subunit 2-2 (EC 6.1.1.13)	D-Alanyl_Lipoteichoic_Acid_Biosynthesis
D-alanine--poly(phosphoribitol) ligase subunit 2 (EC 6.1.1.13)	Teichoic_and_lipoteichoic_acids_biosynthesis	D-Alanyl_Lipoteichoic_Acid_Biosynthesis	Streptococcus_pyogenes_Virulome	Methicillin_resistance_in_Staphylococci
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	Murein_Hydrolases	Peptidoglycan_Biosynthesis	CBSS-84588.1.peg.1247	Peptidoglycan_Biosynthesis_2
D-alanyl transfer protein DltB	Teichoic_and_lipoteichoic_acids_biosynthesis	D-Alanyl_Lipoteichoic_Acid_Biosynthesis	Methicillin_resistance_in_Staphylococci
D-allose-6-phosphate isomerase (EC 5.3.1.-)	D-allose_utilization
D-allose ABC transporter, ATPase component	D-allose_utilization
D-allose ABC transporter, permease component	D-allose_utilization
D-allose ABC transporter, substrate-binding component	D-allose_utilization
D-allose kinase (EC 2.7.1.55)	D-allose_utilization
D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-), row_id 1016	D-allose_utilization
D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-), row_id 846	D-allose_utilization
D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster	Respiratory_dehydrogenases_1	Proline,_4-hydroxyproline_uptake_and_utilization
D-amino acid dehydrogenase large subunit (EC 1.4.99.1)	Respiratory_dehydrogenases_1
D-amino acid dehydrogenase small subunit (EC 1.4.99.1)	Respiratory_dehydrogenases_1	Proline,_4-hydroxyproline_uptake_and_utilization	Pyruvate_Alanine_Serine_Interconversions	GABA_and_putrescine_metabolism_from_cluters
D-amino-acid oxidase (EC 1.4.3.3)	Proline,_4-hydroxyproline_uptake_and_utilization
D-arabino-3-hexulose 6-phosphate formaldehyde lyase	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Pentose_phosphate_pathway
dATP pyrophosphohydrolase NudB (EC 3.6.1.-)	Purine_conversions
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)	Polyhydroxybutyrate_metabolism
D-beta-hydroxybutyrate permease	Polyhydroxybutyrate_metabolism
D,D-heptose 7-phosphate kinase	Capsular_heptose_biosynthesis
Deacetylases, including yeast histone deacetylase and acetoin utilization protein	Hydantoin_metabolism
Deblocking aminopeptidase	CBSS-221109.1.peg.2233
Deblocking aminopeptidase (EC 3.4.11.-)	Protein_degradation
decarboxylase	Serine-glyoxylate_cycle
DedA family inner membrane protein YqjA	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein
DedA protein	Colicin_V_and_Bacteriocin_Production_Cluster	Uptake_of_selenate_and_selenite
DedD protein	Colicin_V_and_Bacteriocin_Production_Cluster
Defective in anther DEHISCENCE1	Octadecanoids
Degenerate integrase, superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
DegV family protein in cluster with TrmH family tRNA/rRNA methyltransferase YacO	CBSS-370552.3.peg.1240	Conserved_gene_cluster_possibly_involved_in_RNA_metabolism
dehydrogenase clustered with L-fuconate utilization genes	L-fucose_utilization	L-fucose_utilization_temp
Dehydrogenase involved in DMSP breakdown	DMSP_breakdown
Dehydrosqualene desaturase (EC 1.14.99.-) (Diapophytoene desaturase) (4,4'-diapophytoene desaturase)	Polyprenyl_Diphosphate_Biosynthesis
Dehydrosqualene synthase (EC 2.5.1.-)	Carotenoids	Polyprenyl_Diphosphate_Biosynthesis	CBSS-196620.1.peg.2477
Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21)	Lysine_degradation
Delta 1-pyrroline-5-carboxylate dehydrogenase domain protein	Proline,_4-hydroxyproline_uptake_and_utilization
Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	Proline,_4-hydroxyproline_uptake_and_utilization	CBSS-196620.1.peg.2477	Arginine_and_Ornithine_Degradation
Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8)	n-Phenylalkanoic_acid_degradation
Delta-5 fatty acid desaturase (EC 1.14.19.3)	Unsaturated_Fatty_Acid_Metabolism
Delta-6 fatty acid desaturase (EC 1.14.19.3)	Unsaturated_Fatty_Acid_Metabolism
DeoR-type transcriptional regulator YihW	O-antigen_capsule_important_for_environmental_persistence
Deoxyadenosine kinase (EC 2.7.1.76)	Purine_conversions
Deoxycytidine kinase (EC 2.7.1.74)	pyrimidine_conversions
Deoxycytidine triphosphate deaminase (EC 3.5.4.13)	pyrimidine_conversions
Deoxycytidine triphosphate deaminase (EC 3.5.4.30) (dUMP-forming)	pyrimidine_conversions
Deoxyguanosine kinase (EC 2.7.1.113)	Purine_conversions	PnuC-like_transporters
Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1)	Staphylococcus_aureus_hypothetical_repetitive_gene_loci	Purine_conversions
Deoxyhypusine synthase	Alkaloid_biosynthesis_from_L-lysine
Deoxynucleoside kinase (EC 2.7.1.145)	pyrimidine_conversions
Deoxyribodipyrimidine photolyase/cryptochrome family protein	DNA_repair,_bacterial
Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	EC699-706	DNA_repair,_bacterial
Deoxyribodipyrimidine photolyase, single-strand-specific	DNA_repair,_bacterial
Deoxyribodipyrimidine photolyase, type II (EC 4.1.99.3)	EC699-706	DNA_repair,_bacterial
Deoxyribonuclease TatD	YcfH	Twin-arginine_translocation_system
Deoxyribonucleoside regulator DeoR (transcriptional repressor)	Deoxyribose_and_Deoxynucleoside_Catabolism
Deoxyribose operon repressor, DeoR family	Deoxyribose_and_Deoxynucleoside_Catabolism
Deoxyribose-phosphate aldolase (EC 4.1.2.4)	Deoxyribose_and_Deoxynucleoside_Catabolism
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23) [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Dephospho-CoA kinase archaeal, predicted (EC 2.7.1.24)	Coenzyme_A_Biosynthesis
Dephospho-CoA kinase (EC 2.7.1.24)	Coenzyme_A_Biosynthesis	CBSS-562.2.peg.633
D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72)	Pyridoxin_(Vitamin_B6)_Biosynthesis
Dethiobiotin synthetase (EC 6.3.3.3)	Biotin_biosynthesis
D-galactarate dehydratase (EC 4.2.1.42)	D-galactarate,_D-glucarate_and_D-glycerate_catabolism
D-galactarate permease	D-galactarate,_D-glucarate_and_D-glycerate_catabolism
D-galactonate regulator, IclR family	D-galactonate_catabolism
D-Galactonate repressor DgoR	D-galactonate_catabolism
D-galactonate transporter	D-galactonate_catabolism
D-glucarate permease	D-galactarate,_D-glucarate_and_D-glycerate_catabolism
D-glutamyl-L-m-Dpm peptidase P45; Peptidoglycan lytic protein P45	CBSS-393121.3.peg.2760
D-glycerate 2-kinase (EC 2.7.1.-)	D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate_metabolism	Entner-Doudoroff_Pathway
D-glycerate 3-kinase (EC 2.7.1.31), plant type	Glycerate_metabolism	Photorespiration_(oxidative_C2_cycle)
D-glycerate transporter (predicted)	D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate_metabolism
D-glycero-beta-D-manno-heptose 7-phosphate kinase	LOS_core_oligosaccharide_biosynthesis
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-)	Capsular_heptose_biosynthesis	LOS_core_oligosaccharide_biosynthesis
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase	Capsular_heptose_biosynthesis	Capsular_Polysaccharides_Biosynthesis_and_Assembly
DHA-specific EI component	Dihydroxyacetone_kinases
DHA-specific IIA component	Dihydroxyacetone_kinases
DHA-specific phosphocarrier protein HPr	Dihydroxyacetone_kinases
D-hydantoinase (EC 3.5.2.2)	Hydantoin_metabolism
Diacylglycerol kinase (EC 2.7.1.107)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria
Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)	Triacylglycerol_metabolism
Diaminobutyrate-pyruvate aminotransferase (EC 2.6.1.46)	Hyperosmotic_ectoine_biosynthesis
Diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase	CBSS-243265.1.peg.4415
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	Riboflavin,_FMN_and_FAD_metabolism
Diaminopimelate decarboxylase (EC 4.1.1.20)	CBSS-323850.3.peg.3269	Lysine_Biosynthesis_DAP_Pathway
Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)	Lysine_Biosynthesis_DAP_Pathway
Diaminopimelate epimerase (EC 5.1.1.7)	CBSS-323850.3.peg.3269	CBSS-84588.1.peg.1247	Lysine_Biosynthesis_DAP_Pathway
Dibenzothiophene desulfurization enzyme B	Alkanesulfonate_assimilation
dicarboxylic acid transporter PcaT	Protocatechuate_branch_of_beta-ketoadipate_pathway
Digeranylgeranylglycerophospholipid reductase	Archaeal_lipids
diglucosyldiacylglycerol synthase (LTA membrane anchor synthesis)	Teichoic_and_lipoteichoic_acids_biosynthesis
diguanylate cyclase (GGDEF domain) with PAS/PAC sensor	CBSS-323850.3.peg.3142	Glutathione-regulated_potassium-efflux_system_and_associated_functions
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	Bacterial_hemoglobins	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Dihydrodiol dehydrogenase (EC 1.3.1.56)	Naphtalene_and_antracene_degradation	Biphenyl_Degradation
Dihydrodipicolinate reductase (EC 1.3.1.26)	Lysine_Biosynthesis_DAP_Pathway	CBSS-280355.3.peg.2835
Dihydrodipicolinate synthase (EC 4.2.1.52)	Lysine_Biosynthesis_DAP_Pathway
Dihydroflavonol-4-reductase (EC 1.1.1.219)	Tannin_biosynthesis	Biflavanoid_biosynthesis
Dihydrofolate reductase (EC 1.5.1.3)	EC49-61	Folate_Biosynthesis	5-FCL-like_protein
Dihydrofolate synthase (EC 6.3.2.12)	Colicin_V_and_Bacteriocin_Production_Cluster	Folate_Biosynthesis
Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17)	Folate_transporters
Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex (EC 2.3.1.-)	Lipoic_acid_metabolism	Acetoin,_butanediol_metabolism	Dehydrogenase_complexes
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Lipoic_acid_metabolism	Dehydrogenase_complexes
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Lipoic_acid_metabolism	Branched_chain_amino_acid_degradation_regulons	Valine_degradation	Leucine_Degradation_and_HMG-CoA_Metabolism	Dehydrogenase_complexes	Isoleucine_degradation
Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	TCA_Cycle	Glycine_cleavage_system	Photorespiration_(oxidative_C2_cycle)	Leucine_Degradation_and_HMG-CoA_Metabolism	Dehydrogenase_complexes
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	TCA_Cycle	Dehydrogenase_complexes
Dihydrolipoamide dehydrogenase of acetoin dehydrogenase (EC 1.8.1.4)	Acetoin,_butanediol_metabolism	Dehydrogenase_complexes
Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4)	Valine_degradation	Leucine_Degradation_and_HMG-CoA_Metabolism	Dehydrogenase_complexes	Isoleucine_degradation
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	TCA_Cycle	Dehydrogenase_complexes
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Lipoic_acid_metabolism	TCA_Cycle	Dehydrogenase_complexes
Dihydroneopterin aldolase (EC 4.1.2.25)	Pterin_metabolism_3	Folate_Biosynthesis	Methanopterin_biosynthesis2	CBSS-235.1.peg.567
Dihydroneopterin triphosphate epimerase	Pterin_metabolism_3	Folate_Biosynthesis
Dihydroneopterin triphosphate pyrophosphohydolase	Folate_Biosynthesis	Queuosine-Archaeosine_Biosynthesis
Dihydroneopterin triphosphate pyrophosphohydolase type 2	Folate_Biosynthesis	Queuosine-Archaeosine_Biosynthesis
Dihydroorotase (EC 3.5.2.3)	De_Novo_Pyrimidine_Synthesis	Zinc_regulated_enzymes	Allantoin_degradation	YgfZ
Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	De_Novo_Pyrimidine_Synthesis	YgfZ
Dihydroorotate dehydrogenase (EC 1.3.3.1)	De_Novo_Pyrimidine_Synthesis	YgfZ	Hypothetical_Related_to_Dihydroorotate_dehydrogenase
Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	De_Novo_Pyrimidine_Synthesis	YgfZ
Dihydropteridine reductase (EC 1.5.1.34)	Pterin_biosynthesis
Dihydropteroate synthase (EC 2.5.1.15)	Pterin_metabolism_3	Folate_Biosynthesis	YgfZ	CBSS-235.1.peg.567
Dihydropyrimidinase (EC 3.5.2.2)	Hydantoin_metabolism	Pyrimidine_utilization
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)	Pyrimidine_utilization
Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29)	Dihydroxyacetone_kinases	Glycerol_fermenation_to_1,3-propanediol
Dihydroxyacetone kinase family protein	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	A_Gram-positive_cluster_that_relates_ribosomal_protein_L28P_to_a_set_of_uncharacterized_proteins
Dihydroxy-acid dehydratase (EC 4.2.1.9)	Branched-Chain_Amino_Acid_Biosynthesis
Dimeric dUTPase (EC 3.6.1.23)	Housecleaning_nucleoside_triphosphate_pyrophosphatases
Dimethyladenosine transferase (EC 2.1.1.-)	rRNA_modification_Bacteria	EC49-61	rRNA_modification	Ribosome_biogenesis_bacterial	rRNA_modification_Archaea
Dimethylallyltransferase (EC 2.5.1.1)	Archaeal_lipids
Dimethylamine:corrinoid methyltransferase	Methanogenesis_from_methylated_compounds
Dimethylamine methyltransferase corrinoid protein	Methanogenesis_from_methylated_compounds
Dimethylamine permease	Methanogenesis_from_methylated_compounds
Dimethylglycine N-methyltransferase	Betaine_biosynthesis_from_glycine
Dimethylsulfoniopropionate (DMSP) acyl CoA transferase DddD	Release_of_Dimethyl_Sulfide_(DMS)_from_Dimethylsulfoniopropionate_(DMSP)
Dimethylsulfoniopropionate (DSMP) lyase DddL	Release_of_Dimethyl_Sulfide_(DMS)_from_Dimethylsulfoniopropionate_(DMSP)
DinG family ATP-dependent helicase CPE1197	DNA_repair,_bacterial_DinG_and_relatives
DinG family ATP-dependent helicase YoaA	DNA_repair,_bacterial_DinG_and_relatives	CBSS-280355.3.peg.2835
DinG family ATP-dependent helicase YpvA	DNA_repair,_bacterial_DinG_and_relatives
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Bacterial_Chemotaxis	ABC_transporter_dipeptide_(TC_3.A.1.5.2)
Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	ABC_transporter_dipeptide_(TC_3.A.1.5.2)
Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	ABC_transporter_dipeptide_(TC_3.A.1.5.2)
Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	ABC_transporter_dipeptide_(TC_3.A.1.5.2)
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	ABC_transporter_dipeptide_(TC_3.A.1.5.2)
Dipeptidyl peptidase IV in 4-hydroxyproline catabolic gene cluster	Proline,_4-hydroxyproline_uptake_and_utilization
Diphosphomevalonate decarboxylase (EC 4.1.1.33)	Staphylococcus_aureus_hypothetical_repetitive_gene_loci	Archaeal_lipids	Isoprenoid_Biosynthesis	Mevalonate_Branch_of_Isoprenoid_Biosynthesis
Dipicolinate synthase subunit A (EC 4.2.1.52)	Dipicolinate_Synthesis
Dipicolinate synthase subunit B	Dipicolinate_Synthesis
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	Anaerobic_respiratory_reductases
Distant homolog of E. coli HemX protein in Xanthomonadaceae	Heme_and_Siroheme_Biosynthesis
Distant similarity with leukotriene C4 synthase (microsomal glutathione S-transferase)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Distant similarity with phosphate transport system regulator	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism
Distant similarity with viral glycoprotein gp160 of HIV type 1	Listeria_Pathogenicity_Island_LIPI-1_extended
Di/tripeptide permease DtpA	Proton-dependent_Peptide_Transporters
Di/tripeptide permease DtpB	Proton-dependent_Peptide_Transporters
Di/tripeptide permease DtpT	Proton-dependent_Peptide_Transporters
Di/tripeptide permease YbgH	Proton-dependent_Peptide_Transporters
Di/tripeptide permease YjdL	Proton-dependent_Peptide_Transporters
Di-/tripeptide transporter	Proton-dependent_Peptide_Transporters	EC699-706
Divinyl protochlorophyllide a 8-vinyl-reductase (EC 1.3.1.75)	Chlorophyll_Biosynthesis
D-lactate dehydrogenase (EC 1.1.1.28)	Fermentations:_Mixed_acid	Fermentations:_Lactate
D-Lactate dehydrogenase (EC 1.1.2.5)	Lactate_utilization	Respiratory_dehydrogenases_1
DltD protein	Teichoic_and_lipoteichoic_acids_biosynthesis
D-malic enzyme (EC 1.1.1.83)	CBSS-502800.3.peg.2785	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	CBSS-344610.3.peg.2335
D-mannonate oxidoreductase (EC 1.1.1.57)	D-Galacturonate_Utilization	D-Galacturonate_and_D-Glucuronate_Utilization	Sugar_utilization_in_Thermotoga	Entner-Doudoroff_Pathway
D-mannose isomerase (EC 5.3.1.7)	Mannose_Metabolism
DMSP breakdown glyoxylase protein	DMSP_breakdown
DMSP breakdown hydrolase protein	DMSP_breakdown
DMSP demethylase EC 2.1.2.10	DMSP_breakdown
DMSP demthylase transcriptional regulator	DMSP_breakdown
DNA-3-methyladenine glycosylase (EC 3.2.2.20)	DNA_Repair_Base_Excision	CBSS-326442.4.peg.1852
DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	DNA_Repair_Base_Excision
DNA-binding capsular synthesis response regulator RcsB	Rcs_phosphorelay_signal_transduction_pathway
DNA-binding domain of ModE	Transport_of_Molybdenum
DNA-binding heavy metal response regulator	Cobalt-zinc-cadmium_resistance	Copper_homeostasis
DNA-binding HTH domain in riboflavin kinase	Riboflavin,_FMN_and_FAD_metabolism
DNA binding protein, FIG046916	Late_competence
DNA-binding protein Fis	DNA_structural_proteins,_bacterial
DNA-binding protein HBsu	DNA_structural_proteins,_bacterial
DNA binding protein HpkR	YeiH
DNA-binding protein HU	DNA_structural_proteins,_bacterial
DNA-binding protein HU-alpha	DNA_structural_proteins,_bacterial
DNA-binding protein HU-beta	DNA_structural_proteins,_bacterial
DNA-binding protein MTH1615	tRNA_modification_Archaea
DNA binding protein [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
DNA binding protein starved cells-like peroxide resistance protein	Oxidative_stress
DNA-binding response regulator KdpE	Potassium_homeostasis
DNA-binding response regulator, LuxR family, near polyamine transporter	Polyamine_Metabolism
DNA-binding response regulator, OmpR family	Phosphate_metabolism
DNA-binding response regulator PhoP2	Phosphate_metabolism
Dna binding response regulator PrrA (RegA)	Global_Two-component_Regulator_PrrBA_in_Proteobacteria
DNA-binding transcriptional activator of the allD operon	Allantoin_Utilization
DNA-damage-inducible protein I	DNA_repair,_bacterial
DNA-damage-inducible protein J	Toxin-antitoxin_systems_(other_than_RelBE_and_MazEF)	DNA_repair,_bacterial
DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	RNA_polymerase_bacterial
DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6), chloroplast	RNA_polymerase_chloroplast
DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	RNA_polymerase_bacterial
DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	RNA_polymerase_bacterial
DNA-directed RNA polymerase beta subunit (EC 2.7.7.6), chloroplast	RNA_polymerase_chloroplast
DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6), chloroplast	RNA_polymerase_chloroplast
DNA-directed RNA polymerase delta (= beta'') subunit (EC 2.7.7.6)	RNA_polymerase_bacterial
DNA-directed RNA polymerase delta (= beta'') subunit (EC 2.7.7.6), chloroplast	RNA_polymerase_chloroplast
DNA-directed RNA polymerase delta subunit (EC 2.7.7.6)	RNA_polymerase_bacterial
DNA-directed RNA polymerase gamma subunit (EC 2.7.7.6)	RNA_polymerase_bacterial
DNA-directed RNA polymerase gamma subunit (EC 2.7.7.6), chloroplast	RNA_polymerase_chloroplast
DNA-directed RNA polymerase I 13.7 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_I
DNA-directed RNA polymerase I 34 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_I
DNA-directed RNA polymerase I 36 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_I
DNA-directed RNA polymerase I 49 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_I
DNA-directed RNA polymerase II 13.2 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_II
DNA-directed RNA polymerase II 13.3 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_II
DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_II
DNA-directed RNA polymerase II 32 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_II
DNA-directed RNA polymerase II 45 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_II
DNA-directed RNA polymerase III 12.5 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase III 17 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase III 25 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase III 31 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase III 36 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase III 37/80 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase III 47 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase III 74 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase III second largest subunit (EC 2.7.7.6)	RNA_polymerase_III
DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)	RNA_polymerase_II
DNA-directed RNA polymerase II second largest subunit (EC 2.7.7.6)	RNA_polymerase_II
DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)	RNA_polymerase_I
DNA-directed RNA polymerase I second largest subunit (EC 2.7.7.6)	RNA_polymerase_I
DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	RNA_polymerase_bacterial	CBSS-176299.4.peg.1292
DNA-directed RNA polymerase omega subunit (EC 2.7.7.6), chloroplast	RNA_polymerase_chloroplast
DNA-directed RNA polymerases I and III 16 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III	RNA_polymerase_I
DNA-directed RNA polymerases I and III 40 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III	RNA_polymerase_I
DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III	RNA_polymerase_I	RNA_polymerase_II
DNA-directed RNA polymerases I, II, and III 15 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III	RNA_polymerase_I	RNA_polymerase_II
DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III	RNA_polymerase_I	RNA_polymerase_II
DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III	RNA_polymerase_I	RNA_polymerase_II
DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide (EC 2.7.7.6)	RNA_polymerase_III	RNA_polymerase_I	RNA_polymerase_II
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like	CBSS-316057.3.peg.1308
DNA-directed RNA polymerase subunit A (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit A' (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit B (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit B' (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit B'' (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit D (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit E''	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit E' (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit F (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit G (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit H (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit K (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit L (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit M (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit M-related protein	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit M-related protein 2	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit N (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA-directed RNA polymerase subunit P (EC 2.7.7.6)	RNA_polymerase_archaeal
DNA double-strand break repair protein mre11	Rad50-Mre11::SbcD-SbcC_DNA_Repair_Module
DNA double-strand break repair rad50 ATPase	Rad50-Mre11::SbcD-SbcC_DNA_Repair_Module
DNA-entry nuclease (Competence-specific nuclease) (EC 3.1.30.-)	Gram_Positive_Competence	Gram-Positive_Extracellular_Nucleases
DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	Rhamnose_containing_glycans
DNA gyrase subunit A (EC 5.99.1.3)	DNA_topoisomerases,_Type_II,_ATP-dependent	Resistance_to_fluoroquinolones
DNA gyrase subunit B (EC 5.99.1.3)	DNA_topoisomerases,_Type_II,_ATP-dependent	CBSS-354.1.peg.1756	Resistance_to_fluoroquinolones
DNA helicase IV	DNA_repair,_bacterial_UvrD_and_related_helicases	CBSS-83333.1.peg.946
DNA helicase (Rad25 homolog)	DNA_Helicase_of_Unknown_Function
DNA helicase [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
DnaJ-class molecular chaperone CbpA	Protein_chaperones
DnaJ-like protein DjlA	EC49-61	Rcs_phosphorelay_signal_transduction_pathway
DNA ligase (EC 6.5.1.2)	DNA_Repair_Base_Excision	NAD_and_NADP_cofactor_biosynthesis_global	CBSS-393121.3.peg.1913	NAD_consumption
DNA mismatch repair endonuclease MutH	DNA_repair,_bacterial
DNA mismatch repair protein MutL	DNA_repair,_bacterial_MutL-MutS_system
DNA mismatch repair protein MutS	DNA_repair,_bacterial_MutL-MutS_system
DNA or RNA helicase of superfamily II	CBSS-584.1.peg.841
DNA polymerase I (EC 2.7.7.7)	DNA_Repair_Base_Excision	DNA-replication
DNA polymerase II (EC 2.7.7.7)	DNA_Repair_Base_Excision	EC49-61	DNA-replication
DNA polymerase III alpha subunit (EC 2.7.7.7)	CBSS-269801.1.peg.809	DNA-replication
DNA polymerase III beta subunit (EC 2.7.7.7)	CBSS-354.1.peg.1756	DNA-replication
DNA polymerase III chi subunit (EC 2.7.7.7)	CBSS-208964.1.peg.3826	DNA-replication
DNA polymerase III delta prime subunit (EC 2.7.7.7)	Heat_shock_dnaK_gene_cluster_extended	DNA-replication
DNA polymerase III delta subunit (EC 2.7.7.7)	CBSS-1313.3.peg.391	DNA-replication
DNA polymerase III epsilon subunit (EC 2.7.7.7)	CBSS-228410.1.peg.134	CBSS-342610.3.peg.1536	DNA-replication
DNA polymerase III psi subunit (EC 2.7.7.7)	DNA-replication
DNA polymerase III subunits gamma and Tau (EC 2.7.7.7)	CBSS-258594.1.peg.613	DNA-replication
DNA polymerase III theta subunit (EC 2.7.7.7)	DNA-replication
DNA polymerase IV (EC 2.7.7.7)	DNA_repair,_bacterial
DNA polymerase sliding clamp protein PCNA	DNA_replication,_archaeal
DNA polymerase X family	CBSS-198094.1.peg.4426
DNA primase (EC 2.7.7.-)	Macromolecular_synthesis_operon	DNA-replication
DNA primase large subunit (EC 2.7.7.-)	DNA_replication,_archaeal
DNA primase small subunit (EC 2.7.7.-)	DNA_replication,_archaeal
DNA recombination and repair protein RecF	DNA_repair,_bacterial_RecFOR_pathway	Hypothetical_Coupled_to_RecF
DNA recombination and repair protein RecO	DNA_repair,_bacterial_RecFOR_pathway	CBSS-176299.4.peg.1292
DNA recombination-dependent growth factor C	DNA_repair,_bacterial	CBSS-562.2.peg.5158_SK3_including
DNA recombination protein RmuC	DNA_repair,_bacterial
DNA repair exonuclease family protein YhaO	DNA_repair,_bacterial
DNA repair protein RadA	DNA_repair,_bacterial
DNA repair protein RadC	DNA_repair,_bacterial
DNA repair protein RecN	DNA_repair,_bacterial	DNA-replication
DNA replication helicase protein MCM	DNA_replication,_archaeal
DNA replication intiation control protein YabA	Heat_shock_dnaK_gene_cluster_extended
DNA replication protein dnaC	DNA-replication
DNA replication terminus site-binding protein	DNA-replication
DNA reverse gyrase (EC 5.99.1.-)	DNA_topoisomerases,_Type_II,_ATP-dependent
DNA sulfur modification protein DndB	DNA_phosphorothioation
DNA sulfur modification protein DndD	DNA_phosphorothioation
DNA sulfur modification protein DndE	DNA_phosphorothioation
DNA topoisomerase IB (poxvirus type) (EC 5.99.1.2)	DNA_topoisomerases,_Type_I,_ATP-independent
DNA topoisomerase I (EC 5.99.1.2)	CBSS-335283.3.peg.454	CBSS-205914.5.peg.1403	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA_topoisomerases,_Type_I,_ATP-independent	pVir_Plasmid_of_Campylobacter
DNA topoisomerase I, eukaryotic-type (EC 5.99.1.2)	DNA_topoisomerases,_Type_I,_ATP-independent
DNA topoisomerase II (EC 5.99.1.3)	DNA_topoisomerases,_Type_II,_ATP-dependent
DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2)	DNA_topoisomerases,_Type_I,_ATP-independent
DNA topoisomerase III (EC 5.99.1.2)	CBSS-335283.3.peg.454	CBSS-205914.5.peg.1403	DNA_topoisomerases,_Type_I,_ATP-independent	CBSS-258594.1.peg.613
DNA topoisomerase V	DNA_topoisomerases,_Type_I,_ATP-independent
DNA topoisomerase VI subunit A (EC 5.99.1.3)	DNA_topoisomerases,_Type_II,_ATP-dependent
DNA topoisomerase VI subunit B (EC 5.99.1.3)	DNA_topoisomerases,_Type_II,_ATP-dependent
DNA transformation protein TfoX	Orphan_regulatory_proteins	CBSS-83333.1.peg.946
D-Ornithine 4,5-aminomutase E subunit (EC 5.4.3.5)	Anaerobic_Oxidative_Degradation_of_L-Ornithine
D-Ornithine 4,5-aminomutase S subunit (EC 5.4.3.5)	Anaerobic_Oxidative_Degradation_of_L-Ornithine
DoxX family protein	CBSS-399599.3.peg.3584
D-proline reductase, 23 kDa subunit (EC 1.21.4.1)	Proline,_4-hydroxyproline_uptake_and_utilization
D-proline reductase, 26 kDa subunit (EC 1.21.4.1)	Proline,_4-hydroxyproline_uptake_and_utilization
D-proline reductase, 45 kDa subunit (EC 1.21.4.1)	Proline,_4-hydroxyproline_uptake_and_utilization
Drug/metabolite transporter (DMT) superfamily protein	Beta-lactamase_cluster_in_Streptococcus
D-serine/D-alanine/glycine transporter	Pyruvate_Alanine_Serine_Interconversions	Glycine_and_Serine_Utilization
D-serine dehydratase (EC 4.3.1.18)	Pyruvate_Alanine_Serine_Interconversions	Glycine_and_Serine_Utilization
D-serine dehydratase transcriptional activator	Glycine_and_Serine_Utilization	CBSS-292415.3.peg.2341
D-serine permease DsdX	Glycine_and_Serine_Utilization
D-specific D-2-hydroxyacid dehydrogenase ddh homolog (EC 1.1.1.28)	CBSS-196620.1.peg.2477
dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	Capsular_heptose_biosynthesis	dTDP-rhamnose_synthesis	linker_unit-arabinogalactan_synthesis	Rhamnose_containing_glycans
dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	dTDP-rhamnose_synthesis	linker_unit-arabinogalactan_synthesis	Rhamnose_containing_glycans
DTDP-4-keto-6-deoxy-D-glucose 4-reductase	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	dTDP-rhamnose_synthesis	CBSS-296591.1.peg.2330	linker_unit-arabinogalactan_synthesis	Rhamnose_containing_glycans
dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL	dTDP-rhamnose_synthesis
dTDP-rhamnosyl transferase RfbF (EC 2.-.-.-)	dTDP-rhamnose_synthesis
D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	Stringent_Response,_(p)ppGpp_metabolism	CBSS-342610.3.peg.283	D-tyrosyl-tRNA(Tyr)_deacylase
DUF1850 domain-containing protein	A_TRAP_transporter_and_a_hypothetical
DUF447 family protein	Methanopterin_biosynthesis2
duf556 family protein	Methanopterin_biosynthesis2
Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	ECF_class_transporters
Duplicated ATPase component glr2054 of energizing module of predicted ECF transporter	ECF_class_transporters
Duplicated ATPase component MTH454 of energizing module of predicted ECF transporter	ECF_class_transporters
Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter	ECF_class_transporters
Duplicated ATPase component of energizing module of predicted ECF transporter in Mycobacteria	ECF_class_transporters
Duplicated ATPase component of energizing module of predicted tryptophan ECF transporter	ECF_class_transporters
Duplicated ATPase component of energizing module of riboflavin ECF transporter	ECF_class_transporters
Duplicated ATPase component SCO2324 of energizing module of predicted cobalamin ECF transporter	ECF_class_transporters
Duplicated ATPase component SS1136 of energizing module of predicted ECF transporter	ECF_class_transporters
Duplicated ATPase component TTE1589 of energizing module of predicted methylthioadenosine ECF transporter	ECF_class_transporters
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine	ECF_class_transporters
D-xylose 1-dehydrogenase (EC 1.1.1.175)	Xylose_utilization
D-xylose proton-symporter XylE	Xylose_utilization
D-xylose proton-symporter XylT	Xylose_utilization
D-xylose-specific 1-epimerase (mutarotase)	Xylose_utilization
D-xylose transport ATP-binding protein xylG	Xylose_utilization
ECF family sigma factor	CBSS-316057.3.peg.1308
ECF sigma factor	CBSS-316057.3.peg.1308
Ectoine Hydroxylase (EC 1.17.-.-)	Hyperosmotic_ectoine_biosynthesis
Efflux pump Lde	Resistance_to_fluoroquinolones
ElaA protein	cAMP_signaling_in_bacteria	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Elastin binding protein EbpS	Adhesins_in_Staphylococcus
Electron transfer flavoprotein, alpha subunit	Lysine_fermentation	Carbonate_Biomineralization	Branched_chain_amino_acid_degradation_regulons	Acetone_Butanol_Ethanol_Synthesis	Acetyl-CoA_fermentation_to_Butyrate
Electron transfer flavoprotein, alpha subunit FixB	Carnitine_Metabolism_in_Microorganisms
Electron transfer flavoprotein, beta subunit	Lysine_fermentation	Hemin_transport_system	Carbonate_Biomineralization	Branched_chain_amino_acid_degradation_regulons	Acetone_Butanol_Ethanol_Synthesis	Acetyl-CoA_fermentation_to_Butyrate
Electron transfer flavoprotein, beta subunit FixA	Carnitine_Metabolism_in_Microorganisms
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)	Anaerobic_respiratory_reductases	Branched_chain_amino_acid_degradation_regulons	Acetyl-CoA_fermentation_to_Butyrate
Electron transport complex protein RnfA	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Electron transport complex protein RnfB	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Electron transport complex protein RnfC	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Electron transport complex protein RnfD	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Electron transport complex protein RnfE	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Electron transport complex protein RnfG	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	Sugar_utilization_in_Thermotogales	Xylose_utilization
Endo-alpha-mannosidase	Mannose_Metabolism
Endo-beta-1,3-1,4 glucanase (Licheninase) (EC 3.2.1.73)	Beta-Glucoside_Metabolism
Endolysin, L-alanyl-D-glutamate peptidase (EC 3.4.-.-) [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Endonuclease III (EC 4.2.99.18)	Control_of_cell_elongation_-_division_cycle_in_Bacilli	DNA_Repair_Base_Excision
Endonuclease IV (EC 3.1.21.2)	DNA_repair,_bacterial
Endonuclease V (EC 3.1.21.7)	DNA_repair,_bacterial
Endonuclease VIII	DNA_Repair_Base_Excision	EC699-706
Endopeptidase spore protease Gpr (EC 3.4.24.78)	Small_acid-soluble_spore_proteins
Endoribonuclease L-PSP	CBSS-176299.4.peg.1996
Energy conserving hydrogenase Eha associated gene 2	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha associated polyferredoxin	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha associated protein (protein R)	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha associated protein (protein S)	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha associated protein, ribokinase homolog (protein T)	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha-associated regulator	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Eha ferredoxin (protein P2)	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha large subunit homolog (protein O)	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha polyferredoxin domain (protein P')	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha polyferredoxin (protein P)	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha polyferredoxin (protein P3)	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha polyferredoxin (protein P4)	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha protein M	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha protein M2	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha proton-sodium antiporter homolog protein H	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha small subunit homolog (protein N)	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein A	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein B	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein C	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein D	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein E	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein F	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein G	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein I	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein I2	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein I3	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein J	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein K	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein K2	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein K3	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Eha transmembrane protein L	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases	Energy_conserving_hydrogenase,_Methanococcales-Methanobacteriales-Methanopyrales
Energy conserving hydrogenase Ehb anchor subunit F	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb ferredoxin-containing protein L	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb integral membrane protein O	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb large subunit (protein N)	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb polyferredoxin (protein K)	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein A	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein B	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein C	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein D	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein G	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein H	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein I	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein J	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein P	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb protein Q	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb small subunit (protein M)	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy conserving hydrogenase Ehb transmembrane protein E	Energy_conserving_hydrogenase_b,_Methanococcales-Methanobacteriales-Methanopyrales	Mebrane_bound_hydrogenases	Archaeal_membrane_bound_hydrogenases
Energy-conserving hydrogenase (ferredoxin), subunit A	Mebrane_bound_hydrogenases	NiFe_hydrogenase_maturation	Energy-conserving_hydrogenase_(ferredoxin)	Archaeal_membrane_bound_hydrogenases
Energy-conserving hydrogenase (ferredoxin), subunit B	Mebrane_bound_hydrogenases	Energy-conserving_hydrogenase_(ferredoxin)	Archaeal_membrane_bound_hydrogenases
Energy-conserving hydrogenase (ferredoxin), subunit C	Mebrane_bound_hydrogenases	Energy-conserving_hydrogenase_(ferredoxin)	Archaeal_membrane_bound_hydrogenases
Energy-conserving hydrogenase (ferredoxin), subunit D	Mebrane_bound_hydrogenases	Energy-conserving_hydrogenase_(ferredoxin)	Archaeal_membrane_bound_hydrogenases
Energy-conserving hydrogenase (ferredoxin), subunit E	Mebrane_bound_hydrogenases	Energy-conserving_hydrogenase_(ferredoxin)	Archaeal_membrane_bound_hydrogenases
Energy-conserving hydrogenase (ferredoxin), subunit F	Mebrane_bound_hydrogenases	Energy-conserving_hydrogenase_(ferredoxin)	Archaeal_membrane_bound_hydrogenases
Enolase (EC 4.2.1.11)	Glycolysis_and_Gluconeogenesis	Serine-glyoxylate_cycle	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Dehydrogenase_complexes
Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	Fatty_Acid_Biosynthesis_FASII
Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)	mycolic_acid_synthesis	Fatty_Acid_Biosynthesis_FASII
Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10)	Fatty_Acid_Biosynthesis_FASII
Enoyl-CoA hydratase [branched-chain amino acid degradation] (EC 4.2.1.17)	Dehydrogenase_complexes
Enoyl-CoA hydratase (EC 4.2.1.17)	Carbonate_Biomineralization	n-Phenylalkanoic_acid_degradation	Butanol_Biosynthesis	Valine_degradation	Acetyl-CoA_fermentation_to_Butyrate	Fatty_acid_degradation_regulons	Polyhydroxybutyrate_metabolism	Isoleucine_degradation
Enoyl-CoA hydratase (EC 4.2.1.17), anthrose biosynthesis	Anthrose_Biosynthesis
Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17)	Branched_chain_amino_acid_degradation_regulons	Isobutyryl-CoA_to_Propionyl-CoA_Module	Isoleucine_degradation
Enoyl-CoA hydratase/isomerase family protein, may be related to NAD-dependent histone deacetylation	CBSS-216591.1.peg.168
enoyl-CoA hydratase, R-specific	n-Phenylalkanoic_acid_degradation
Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)	Branched_chain_amino_acid_degradation_regulons	Valine_degradation	Isobutyryl-CoA_to_Propionyl-CoA_Module
Enterobactin receptor IrgA	Iron_acquisition_in_Vibrio
Enterobactin receptor VctA	Iron_acquisition_in_Vibrio
Enterobactin synthetase component F (EC 2.7.7.-)	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport
Enterochelin uptake ATP-binding protein	Campylobacter_Iron_Metabolism
Enterochelin uptake periplasmic binding protein	Campylobacter_Iron_Metabolism
Enterochelin uptake permease CeuB	Campylobacter_Iron_Metabolism
Enterochelin uptake permease CeuC	Campylobacter_Iron_Metabolism
Enterotoxin, A subunit (NAD(+)--diphthamide ADP- ribosyltransferase) (EC 2.4.2.36)	Cholera_toxin
Enterotoxin, B subunit	Cholera_toxin
Envelope stress response regulator BaeR	Orphan_regulatory_proteins
Envelope stress sensory histidine kinase BaeS	Orphan_regulatory_proteins
Epi-inositol hydrolase (EC 3.7.1.-)	Inositol_catabolism
Epimerase KguE	2-Ketogluconate_Utilization
Error-prone repair protein UmuC	DNA_repair,_bacterial
Error-prone repair protein UmuD (EC 3.4.21.-)	DNA_repair,_bacterial
Erythritol kinase EryA (EC 2.7.1.27)	Erythritol_utilization
Erythritol phosphate dehydrogenase EryB	Erythritol_utilization
Erythritol transcriptional regulator EryD	Erythritol_utilization
Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	Pyridoxin_(Vitamin_B6)_Biosynthesis
EsaC protein within ESAT-6 gene cluster (S.aureus type)	ESAT-6_proteins_secretion_system_in_Firmicutes
ESAT-6/Esx family secreted protein EsxA/YukE	ESAT-6_proteins_secretion_system_in_Firmicutes
ESAT-6/Esx family secreted protein EsxB	ESAT-6_proteins_secretion_system_in_Firmicutes
Estrogen sulfotransferase (EC 2.8.2.4)	Steroid_sulfates
Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)	Ethanolamine_utilization
Ethanolamine ammonia-lyase light chain (EC 4.3.1.7)	Ethanolamine_utilization
Ethanolamine operon regulatory protein	Ethanolamine_utilization
Ethanolamine permease	Ethanolamine_utilization
Ethanolamine sensory transduction histidine kinase	Ethanolamine_utilization
Ethanolamine two-component response regulator	Ethanolamine_utilization
Ethanolamine utilization polyhedral-body-like protein EutK	Ethanolamine_utilization
Ethanolamine utilization polyhedral-body-like protein EutL	Ethanolamine_utilization
Ethanolamine utilization polyhedral-body-like protein EutM	Ethanolamine_utilization
Ethanolamine utilization polyhedral-body-like protein EutN	Ethanolamine_utilization
Ethanolamine utilization polyhedral-body-like protein EutS	Ethanolamine_utilization
Ethanolamine utilization protein EutA	Ethanolamine_utilization
Ethanolamine utilization protein EutG	Ethanolamine_utilization
Ethanolamine utilization protein EutJ	Ethanolamine_utilization
Ethanolamine utilization protein EutP	Ethanolamine_utilization
Ethanolamine utilization protein EutQ	Ethanolamine_utilization
Ethanolamine utilization protein similar to PduA/PduJ	Ethanolamine_utilization
Ethanolamine utilization protein similar to PduL	Ethanolamine_utilization
Ethanolamine utilization protein similar to PduT	Ethanolamine_utilization
Ethanolamine utilization protein similar to PduU	Ethanolamine_utilization
Ethanolamine utilization protein similar to PduV	Ethanolamine_utilization
Ethylbenzene dehydrogenase alpha subunit (EC 1.17.99.2)	Anaerobic_toluene_and_ethylbenzene_degradation
Ethylbenzene dehydrogenase beta subunit (EC 1.17.99.2)	Anaerobic_toluene_and_ethylbenzene_degradation
Ethylbenzene dehydrogenase delta subunit (EC 1.17.99.2)	Anaerobic_toluene_and_ethylbenzene_degradation
Ethylbenzene dehydrogenase gamma subunit (EC 1.17.99.2)	Anaerobic_toluene_and_ethylbenzene_degradation
Eukaryotic peptide chain release factor GTP-binding subunit	Translation_elongation_factors_eukaryotic_and_archaeal
Eukaryotic peptide chain release factor subunit 1	Translation_elongation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 2 alpha subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 2 beta subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 2 gamma subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 3 110 kDa subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 3 135 kDa subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 3 30 kDa subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 3 39 kDa subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 3 90 kDa subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 3 93 kDa subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 3 RNA-binding subunit	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 4A	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 4B	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 4E	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 4H	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 5	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 5A	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic translation initiation factor 6	Translation_initiation_factors_eukaryotic_and_archaeal
Eukaryotic-type low-affinity urea transporter	Urea_decomposition
Evolved beta-D-galactosidase, alpha subunit	Lactose_utilization
Evolved beta-D-galactosidase, beta subunit	Lactose_utilization
Evolved beta-D-galactosidase transcriptional repressor	Lactose_utilization
Excinuclease ABC subunit A	DNA_repair,_UvrABC_system
Excinuclease ABC subunit A, dimeric form	DNA_repair,_UvrABC_system
Excinuclease ABC subunit A paralog in greater Bacteroides group	DNA_repair,_UvrABC_system
Excinuclease ABC subunit A paralog of unknown function	DNA_repair,_UvrABC_system
Excinuclease ABC subunit B	DNA_repair,_UvrABC_system
Excinuclease ABC subunit C	DNA_repair,_UvrABC_system
Excinuclease cho (excinuclease ABC alternative C subunit)	DNA_repair,_UvrABC_system
Excisionase [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Exodeoxyribonuclease I (EC 3.1.11.1)	DNA_Repair_Base_Excision
Exodeoxyribonuclease III (EC 3.1.11.2)	DNA_repair,_bacterial
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	CBSS-269801.1.peg.2186	Beta-lactamase_cluster_in_Streptococcus	DNA-replication
Exodeoxyribonuclease V beta chain (EC 3.1.11.5)	DNA-replication
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)	DNA-replication
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	DNA_repair,_bacterial
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	DNA_repair,_bacterial
Exonuclease SbcC	DNA_repair,_bacterial
Exonuclease SbcD	DNA_repair,_bacterial
Exopolyphosphatase (EC 3.6.1.11)	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism
Exopolysaccharide biosynthesis glycosyltransferase EpsF (EC 2.4.1.-)	Exopolysaccharide_Biosynthesis
exopolysaccharide biosynthesis protein EpsF, putative	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Exopolysaccharide biosynthesis transcriptional activator EpsA	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Exopolysaccharide_Biosynthesis	Streptococcus_agalactiae_virulome
Exopolysaccharide biosynthesis transcription antiterminator, LytR family	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Exopolysaccharide_Biosynthesis
Exopolysaccharide production protein ExoF precursor	CBSS-258594.1.peg.3339
Exopolysaccharide production protein ExoQ	CBSS-258594.1.peg.3339
Exopolysaccharide production protein ExoZ	CBSS-258594.1.peg.3339
Exoribonuclease II (EC 3.1.13.1)	RNA_processing_and_degradation,_bacterial
Export ABC transporter ATP-binding protein	Streptolysin_S_Biosynthesis_and_Transport
Export ABC transporter permease	Streptolysin_S_Biosynthesis_and_Transport
Expressed protein possibly involved in photorespiration	Photorespiration_(oxidative_C2_cycle)
Extracellular adherence protein of broad specificity Eap/Map	Adhesins_in_Staphylococcus
Extracellular deoxyribonuclease Dns (EC 3.1.21.-)	Natural_DNA_Transformation_in_Vibrio
Extracellular deoxyribonuclease Xds	Natural_DNA_Transformation_in_Vibrio
Extracellular ECM and plasma binding protein Emp	Adhesins_in_Staphylococcus
Extracellular fibrinogen-binding protein Efb	Adhesins_in_Staphylococcus
Extracellular solute binding protein ScrB	Control_of_Swarming_in_Vibrio_and_Shewanella_species
extradiol dioxygenase large subunit	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
F420-dependent methylenetetrahydromethanopterin dehydrogenase (EC 1.5.99.9)	Methanogenesis	One-carbon_metabolism_by_tetrahydropterines
F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase (EC 1.5.99.11)	Methanogenesis
F420H2:quinone oxidoreductase, 11.2 kDa subunit, putative	Respiratory_Complex_I
F420H2:quinone oxidoreductase, 39 kDa subunit, putative	Respiratory_Complex_I
F420-nonreducing hydrogenase (vhtD-1)	Hydrogenases
FAD-binding protein, inferred for ABFAE pathway	CBSS-218491.3.peg.427
FAD-dependent monooxygenase PhzS	Phenazine_biosynthesis
FAD-dependent pyridine nucleotide-disulphide oxidoreductase, GBAA2537 homolog	CBSS-261594.1.peg.2640
FadE30	CBSS-164757.7.peg.5020
Family 13 glycosyl hydrolase, row 724	Sucrose_utilization
Farnesyl-diphosphate farnesyltransferase (EC 2.5.1.21)	CBSS-196620.1.peg.2477
Farnsylgeranyl pyrophosphate synthetase (EC 2.5.1.-)	Archaeal_lipids
Fatty-acid amide hydrolase (EC 3.1.-.-)	Cannabinoid_biosynthesis
Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1)	Unsaturated_Fatty_Acid_Metabolism
Fatty acid desaturase (EC 1.14.19.3)	Unsaturated_Fatty_Acid_Metabolism
Fatty acid elongase 1	Suberine_biosynthesis
Fatty acid elongase-like protein	Suberine_biosynthesis
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO	Lipid_A_modifications
Fe2+/Zn2+ uptake regulation proteins	Oxidative_stress	Putative_hemin_transporter
Fe-containing alcohol dehydrogenase	Inositol_catabolism
[Fe] hydrogenase gamma (EC 1.12.7.2)	Hydrogenases
[Fe] hydrogenase, HymA subunit, putative	Hydrogenases
[Fe] hydrogenase, HymB subunit, putative	Hydrogenases
[Fe] hydrogenase, HymD subunit, putative	Hydrogenases
FemA, factor essential for methicillin resistance	Methicillin_resistance_in_Staphylococci
FemB, factor involved in methicillin resistance	Methicillin_resistance_in_Staphylococci
FemC, factor involved in methicillin resistance	Methicillin_resistance_in_Staphylococci
FemD, factor involved in methicillin resistance	CBSS-261591.3.peg.3916	Methicillin_resistance_in_Staphylococci
FeMo cofactor biosynthesis protein NifB	Nitrogen_fixation
Ferredoxin	Inorganic_Sulfur_Assimilation	Soluble_cytochromes_and_functionally_related_electron_carriers	YgfZ
Ferredoxin, 2Fe-2S	Fe-S_cluster_assembly	tRNA_modification_Bacteria	Soluble_cytochromes_and_functionally_related_electron_carriers	Biogenesis_of_cytochrome_c_oxidases
Ferredoxin 3 fused to uncharacterized domain	Nitrosative_stress
Ferredoxin component of carbazole 1,9a-dioxygenase	carbazol_degradation_cluster
Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)	cAMP_signaling_in_bacteria	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Photorespiration_(oxidative_C2_cycle)	Ammonia_assimilation
Ferredoxin-like protein	Acetyl-CoA_fermentation_to_Butyrate
Ferredoxin-like protein FixX	Acetyl-CoA_fermentation_to_Butyrate
Ferredoxin-like protein involved in electron transfer	Inorganic_Sulfur_Assimilation
Ferredoxin-like protein YdiT	Acetyl-CoA_fermentation_to_Butyrate
Ferredoxin-like protein YgcO	Acetyl-CoA_fermentation_to_Butyrate
Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)	Inorganic_Sulfur_Assimilation
Ferredoxin--NADP(+) reductase (EC 1.18.1.2)	Inorganic_Sulfur_Assimilation	Biogenesis_of_cytochrome_c_oxidases
Ferredoxin-NADP(+) reductase (EC 1.18.1.2)	Cytochrome_B6-F_complex	Sulfate_assimilation
Ferredoxin--nitrite reductase (EC 1.7.7.1)	Nitrate_and_nitrite_ammonification
Ferredoxin reductase	Anaerobic_respiratory_reductases
Ferredoxin reductase component of carbazole 1,9a-dioxygenase	carbazol_degradation_cluster
Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)	Inorganic_Sulfur_Assimilation
Ferredoxin--sulfite reductase, bacillial type (EC 1.8.7.1)	Inorganic_Sulfur_Assimilation
Ferredoxin--sulfite reductase (EC 1.8.7.1)	Inorganic_Sulfur_Assimilation
Ferredoxin-type protein NapF (periplasmic nitrate reductase)	Nitrate_and_nitrite_ammonification
Ferredoxin-type protein NapG (periplasmic nitrate reductase)	Nitrate_and_nitrite_ammonification
Ferric aerobactin ABC transporter, ATPase component	Iron_acquisition_in_Vibrio
Ferric aerobactin ABC transporter, periplasmic substrate binding protein	Iron_acquisition_in_Vibrio
Ferric aerobactin ABC transporter, permease component	Iron_acquisition_in_Vibrio
Ferric enterobactin transport ATP-binding protein fepC (TC 3.A.1.14.2)	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport	ABC_transporter_ferric_enterobactin_(TC_3.A.1.14.2)
Ferric enterobactin transport system permease protein fepD (TC 3.A.1.14.2)	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport	ABC_transporter_ferric_enterobactin_(TC_3.A.1.14.2)
Ferric enterobactin transport system permease protein fepG (TC 3.A.1.14.2)	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport	ABC_transporter_ferric_enterobactin_(TC_3.A.1.14.2)
Ferrichrome ABC transporter (ATP binding subunit) PvuE	Vibrioferrin_synthesis
Ferrichrome ABC transporter (permease) PvuC	Vibrioferrin_synthesis
Ferrichrome ABC transporter (permease) PvuD	Vibrioferrin_synthesis
Ferrichrome-binding periplasmic protein precursor in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)	ABC_transporter_ferrichrome_(TC_3.A.1.14.3)	Iron_acquisition_in_Vibrio
Ferrichrome-iron receptor	ABC_transporter_ferrichrome_(TC_3.A.1.14.3)	Transport_of_Iron	Iron_acquisition_in_Vibrio
Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	Flavohaemoglobin	ABC_transporter_ferrichrome_(TC_3.A.1.14.3)	Hemin_transport_system	Iron_acquisition_in_Vibrio
Ferrichrome transport system permease protein fhuB (TC 3.A.1.14.3)	ABC_transporter_ferrichrome_(TC_3.A.1.14.3)	Iron_acquisition_in_Vibrio
Ferric iron ABC transporter, ATP-binding protein	Transport_of_Iron	Iron_acquisition_in_Streptococcus	Iron_acquisition_in_Vibrio
Ferric iron ABC transporter, iron-binding protein	Transport_of_Iron	Iron_acquisition_in_Streptococcus	Iron_acquisition_in_Vibrio	Campylobacter_Iron_Metabolism
Ferric iron ABC transporter, permease protein	Transport_of_Iron	Iron_acquisition_in_Streptococcus	Iron_acquisition_in_Vibrio	Campylobacter_Iron_Metabolism
Ferric receptor CfrA	Ton_and_Tol_transport_systems	Campylobacter_Iron_Metabolism
Ferric reductase (1.6.99.14)	Anaerobic_respiratory_reductases
Ferric siderophore receptor PsuA	Vibrioferrin_synthesis
Ferric siderophore transport system, biopolymer transport protein ExbB	Hemin_transport_system	Ton_and_Tol_transport_systems	Campylobacter_Iron_Metabolism
Ferric siderophore transport system, biopolymer transport protein ExbD	Ton_and_Tol_transport_systems	Campylobacter_Iron_Metabolism
Ferric siderophore transport system, periplasmic binding protein TonB	Hemin_transport_system	Ton_and_Tol_transport_systems	Campylobacter_Iron_Metabolism
Ferric uptake regulation protein	Oxidative_stress	Putative_hemin_transporter	Campylobacter_Iron_Metabolism
Ferric uptake regulation protein FUR	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Transport_of_Iron	Oxidative_stress	YgfZ	Iron_acquisition_in_Vibrio
Ferric vibriobactin, enterobactin transport system, ATP-binding protein (TC 3.A.1.14.6)	Iron_acquisition_in_Vibrio
Ferric vibriobactin, enterobactin transport system, ATP-binding protein ViuC (TC 3.A.1.14.6)	Iron_acquisition_in_Vibrio
Ferric vibriobactin, enterobactin transport system, permease protein VctD (TC 3.A.1.14.6)	Iron_acquisition_in_Vibrio
Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6)	Iron_acquisition_in_Vibrio
Ferric vibriobactin, enterobactin transport system, permease protein ViuD (TC 3.A.1.14.6)	Iron_acquisition_in_Vibrio
Ferric vibriobactin, enterobactin transport system, permease protein ViuG (TC 3.A.1.14.6)	Iron_acquisition_in_Vibrio
Ferric vibriobactin, enterobactin transport system, substrate-binding protein VctP (TC 3.A.1.14.6)	Iron_acquisition_in_Vibrio
Ferric vibriobactin, enterobactin transport system, substrate-binding protein ViuP (TC 3.A.1.14.6)	Iron_acquisition_in_Vibrio
Ferric vibriobactin receptor ViuA	Iron_acquisition_in_Vibrio
Ferric vulnibactin receptor VuuA	Iron_acquisition_in_Vibrio
Ferrienterobactin-binding periplasmic protein fepB (TC 3.A.1.14.2)	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport	ABC_transporter_ferric_enterobactin_(TC_3.A.1.14.2)
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	Biogenesis_of_c-type_cytochromes	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Ferrous iron transport periplasmic protein EfeO	Cryptic_ferrous_iron_transporter_EfeUOB
Ferrous iron transport permease EfeU	Cryptic_ferrous_iron_transporter_EfeUOB
Ferrous iron transport peroxidase EfeB	Cryptic_ferrous_iron_transporter_EfeUOB
Ferrous iron transport protein A	Transport_of_Iron	Iron_acquisition_in_Vibrio
Ferrous iron transport protein A, putative	Campylobacter_Iron_Metabolism
Ferrous iron transport protein B	Transport_of_Iron	CBSS-196620.1.peg.2477	Iron_acquisition_in_Vibrio	Campylobacter_Iron_Metabolism
Ferrous iron transport protein C	Iron_acquisition_in_Vibrio
Ferroxidase (EC 1.16.3.1)	Oxidative_stress
Ferulate-5-hydroxylase	Phenylpropanoids_general_biosynthesis
Feruloyl-CoA synthetase	Phenylpropanoid_compound_degradation
Fe-S-cluster-containing hydrogenase components 1	Anaerobic_respiratory_reductases	Hydrogenases
Fe-S-cluster-containing hydrogenase components 2	Hydrogenases
Fe-S OXIDOREDUCTASE (1.8.-.-) Wyeosine biosynthesis	tRNA_modification_Archaea	Wyeosine-MimG_Biosynthesis	tRNA_modification_Archaea_Henri
Fe-S oxidoreductase-like protein in Rubrerythrin cluster	Rubrerythrin
Fibrillarin	Ribosome_biogenesis_archaeal	rRNA_modification	rRNA_modification_Archaea
Fibrinogen alpha chain	Coagulation_cascade
Fibrinogen-binding protein	Streptococcus_pyogenes_Virulome
Fibronectin-binding protein	Streptococcus_pyogenes_recombinatorial_zone	Streptococcus_pyogenes_Virulome
Fibronectin-binding protein 2	Streptococcus_pyogenes_recombinatorial_zone
Fibronectin binding protein FnbA	Adhesins_in_Staphylococcus
Fibronectin binding protein FnbB	Adhesins_in_Staphylococcus
Fibronectin/fibrinogen-binding protein	Adhesion_of_Campylobacter
FIG000859: hypothetical protein	CBSS-1806.1.peg.1285	RuvABC_plus_a_hypothetical
FIG000906: Predicted Permease	CBSS-208964.1.peg.3826
FIG000988: Predicted permease	CBSS-208964.1.peg.3826
FIG001014_Response regulator of the LytR/AlgR family	Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A
FIG001081: Putative alpha helix protein	PmbA_and_a_Hypothetical_Protein	Putative_TldE-TldD_proteolytic_complex
FIG001412: Putative protease	CBSS-214092.1.peg.3450
FIG001421: Putative protease	CBSS-214092.1.peg.3450
FIG001553: Hydrolase, HAD subfamily IIIA	CBSS-1313.3.peg.391
FIG001568: Amine oxidase, flavin-containing	CBSS-291331.3.peg.3674
FIG001571: Hypothetical protein	CBSS-291331.3.peg.3674
FIG001583: hypothetical protein, contains S4-like RNA binding domain	Cell_Division_Cluster
FIG001590: Putative conserved exported protein precursor	CBSS-87626.3.peg.3639
FIG001621: Zinc protease	Unspecified_monosaccharide_transport_cluster	CBSS-257314.1.peg.676
FIG001674: hypothetical protein	CBSS-584.1.peg.2497
FIG001721: Predicted N6-adenine-specific DNA methylase	Control_of_cell_elongation_-_division_cycle_in_Bacilli
FIG001802: Putative alkaline-shock protein	A_Gram-positive_cluster_that_relates_ribosomal_protein_L28P_to_a_set_of_uncharacterized_proteins
FIG001957: putative hydrolase	CBSS-584.1.peg.3382
FIG001960: FtsZ-interacting protein related to cell division	Cell_Division_Cluster
FIG002076: hypothetical protein	CBSS-188.1.peg.6720
FIG002082: Protein sirB2	A_Gammaproteobacteria_Cluster_Relating_to_Translation
FIG002208: Acetyltransferase (EC 2.3.1.-)	CBSS-214092.1.peg.3450
FIG002344: Hydrolase (HAD superfamily)	CBSS-257314.1.peg.676
FIG002379: metal-dependent hydrolase	CBSS-269801.1.peg.809
FIG002625: Ribosomal large subunit pseudouridine synthase E (EC 5.4.99.-)	CBSS-354.1.peg.876
FIG002708: Protein SirB1	A_Gammaproteobacteria_Cluster_Relating_to_Translation
FIG002776: hypothetical protein	CBSS-354.1.peg.876
FIG002842: hypothetical protein	CBSS-562.2.peg.633
FIG002903: a protein of unknown function perhaps involved in purine metabolism	CBSS-354.1.peg.876
FIG002961: Putative lipid carrier protein	CBSS-214092.1.peg.3450
FIG002994: Putative transcriptional regulator	CBSS-291331.3.peg.3674
FIG003276: zinc-binding protein	CBSS-562.2.peg.633
FIG003307: hypothetical protein	CBSS-323097.3.peg.2594
FIG003437: hypothetical with DnaJ-like domain	Conenzyme_B12_related_Hypothetical:_Clusters_with_cobST
FIG003568: hypothetical protein	Unspecified_monosaccharide_transport_cluster
FIG003573: hypothetical protein	CBSS-262719.3.peg.410
FIG003603: membrane protein, putative	CBSS-52598.3.peg.2843
FIG003620: Proteophosphoglycan precursor (Fragment)	CBSS-52598.3.peg.2843	CBSS-316057.3.peg.1294
FIG003879: Predicted amidohydrolase	CBSS-354.1.peg.2917
FIG003955: protein of unknown function	A_Hypothetical_Protein_Related_to_Proline_Metabolism
FIG004454: RNA binding protein	CBSS-1313.3.peg.391
FIG005069: Hypothetical protein	CBSS-291331.3.peg.3674
FIG005189: putative transferase clustered with tellurite resistance proteins TehA/TehB	Tellurite_resistance:_Chromosomal_determinants
FIG005453: Putative DeoR-family transcriptional regulator	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related
FIG005495: hypothetical protein	Hypothetical_Related_to_Dihydroorotate_dehydrogenase
FIG005666: putative helicase	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related
FIG005686: hypothetical protein	Control_of_cell_elongation_-_division_cycle_in_Bacilli
FIG006126: DNA helicase, restriction/modification system component YeeB	CBSS-316273.3.peg.2378
FIG006442: Integral membrane protein	Competence_or_DNA_damage-inducible_protein_CinA_and_related_protein_families
FIG007042: hypothetical protein	Unspecified_monosaccharide_transport_cluster
FIG007079: UPF0348 protein family	CBSS-269801.1.peg.1715	CBSS-1313.3.peg.391	CBSS-222523.1.peg.3937
FIG009210: peptidase, M16 family	Unspecified_monosaccharide_transport_cluster	CBSS-257314.1.peg.676
FIG013354: hypothetical protein	Sporulation-related_Hypotheticals
FIG013736: cell division protein (putative)	Cell_Division_Cluster
FIG014461: putative endonuclease containing a URI domain	CBSS-214092.1.peg.3450
FIG017807: peptidase, M16 family	CBSS-350688.3.peg.1509
FIG017823: ATPase, MoxR family	CBSS-52598.3.peg.2843	CBSS-316273.3.peg.448	CBSS-316057.3.peg.1294
FIG018583: protein of unknown function	Cell_Division_Cluster	CBSS-630.2.peg.3360
FIG019327: Probable conserved membrane protein	CBSS-1806.1.peg.1285
FIG019733: possible DNA-binding protein	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related
FIG025803: D,D-carboxypeptidase family protein	CBSS-584.1.peg.1352
FIG026291: Hypothetical protein	CBSS-291331.3.peg.3674
FIG030745: polysaccharide deacetylase, putative	CBSS-350688.3.peg.1509
FIG033155: Hypothetical protein	CBSS-291331.3.peg.3674
FIG033545: PE-PGRS family protein	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related
FIG033680: Hypothetical protein	CBSS-316273.3.peg.448
FIG034376: Hypothetical protein	CBSS-316273.3.peg.2709
FIG034458: Plasmid related protein	CBSS-316273.3.peg.2709
FIG034602: Probable transmembrane protein	CBSS-316273.3.peg.922
FIG035155: Enoyl-CoA hydratase (EC 4.2.1.17)	Lipopolysaccharide-related_cluster_in_Alphaproteobacteria
FIG035830: Two-component system regulatory protein	CBSS-316273.3.peg.922
FIG036757: Plasmid-related protein	CBSS-316273.3.peg.2709
FIG037127: Two-component system sensor protein	CBSS-316273.3.peg.922
FIG037995: Hypothetical protein	CBSS-316273.3.peg.448
FIG041301: Hypothetical protein	CBSS-316273.3.peg.2709
FIG042594: DUF1550 domain-containing protein	CBSS-316273.3.peg.448
FIG045085: Hypothetical protein	CBSS-316273.3.peg.448
FIG045374: Type II restriction enzyme, methylase subunit YeeA	CBSS-316273.3.peg.2378
FIG046709: Hypothetical protein	CBSS-316273.3.peg.2709
FIG048626: Hypothetical protein	CBSS-316273.3.peg.448
FIG049434: Periplasmic protein TonB, links inner and outer membranes	CBSS-316273.3.peg.2709
FIG052052: HIT family protein	CBSS-1806.1.peg.1285
FIG062860: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	Lipopolysaccharide-related_cluster_in_Alphaproteobacteria
FIG068798: Hypothetical protein	CBSS-316273.3.peg.2709
FIG076210: Hypothetical protein	CBSS-316273.3.peg.2709
FIG076676: Hypothetical protein	CBSS-316273.3.peg.2709
FIG078367: Inositol monophosphatase family protein	Lipopolysaccharide-related_cluster_in_Alphaproteobacteria
FIG081201: hypothetical protein	Lipopolysaccharide-related_cluster_in_Alphaproteobacteria
FIG086212: Putative lipoprotein	CBSS-291331.3.peg.3674
FIG086515: Hypothetical protein	CBSS-316273.3.peg.922
FIG097052: Sugar transporter	CBSS-291331.3.peg.3674
FIG129514: hypothetical protein	Sulfatases_and_sulfatase_modifying_factor_1
FIG129662: hypothetical protein	CBSS-188.1.peg.9880
FIG132708: a glutathione-dependent thiol reductase	A_Glutathione-dependent_Thiol_Reductase_Assoiated_with_a_Step_in_Lysine_Biosynthesis	CBSS-584.1.peg.1352
FIG134348: essential endopeptidase	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	YgjD_and_YeaZ	YrdC-YciO	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Macromolecular_synthesis_operon
FIG137276: Maf/YceF/YhdE family protein	CBSS-198215.1.peg.1051
FIG137478: Hypothetical protein	EC699-706	tRNA_modification_Bacteria
FIG137619: Putative proteasome component	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related
FIGfam003972: membrane protein	CBSS-269801.1.peg.1715
FIGfam005179	CBSS-269482.1.peg.1294
FIGfam009438: Two-component system DNA-binding response regulator	Phosphoglycerate_transport_system
FIGfam010146: Two component system histidine kinase	Phosphoglycerate_transport_system
FIGfam010717	CBSS-323850.3.peg.3284
FIGfam012970: transmembrane protein	Phosphoglycerate_transport_system
FIGfam013899: ABC transporter substrate-binding protein	Phosphoglycerate_transport_system
FIGfam014588: Predicted regulator of CFA/I fimbriae	Colonization_factor_antigen_I_fimbriae
FIGfam020323	CBSS-323850.3.peg.3284
FIGfam050825	CBSS-203122.12.peg.188
FIGfam110555	CBSS-203122.12.peg.188
FIGfam135315: Iojap-related protein	NAD_and_NADP_cofactor_biosynthesis_global	CBSS-316279.3.peg.746	tRNA_modification_Bacteria	CBSS-1313.3.peg.391
FIGfam138462: Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase related enzyme	CBSS-218491.3.peg.427
Filamentous haemagglutinin domain protein	Adhesion_of_Campylobacter
Fimbriae-like adhesin FimI	The_fimbrial_Sfm_cluster
Fimbriae-like adhesin SfmA	The_fimbrial_Sfm_cluster
Fimbriae-like adhesin SfmH	The_fimbrial_Sfm_cluster
Fimbriae-like periplasmic protein SfmF	The_fimbrial_Sfm_cluster
Fimbrial assembly protein FimB	Type_IV_pilus
Fimbrial periplasmic chaperone SfmC	The_fimbrial_Sfm_cluster
Firmicutes ribosomal L7Ae family protein	Ribosome_LSU_bacterial
FixA protein	carnitine_metabolism
FixB protein	carnitine_metabolism
FixO3 cytochrome-c oxidase subunit	Terminal_cytochrome_C_oxidases
FKBP-type peptidyl-prolyl cis-trans isomerase fklB (EC 5.2.1.8)	Peptidyl-prolyl_cis-trans_isomerase
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	Potassium_homeostasis	Peptidyl-prolyl_cis-trans_isomerase	Glutathione-regulated_potassium-efflux_system_and_associated_functions
FKBP-type peptidyl-prolyl cis-trans isomerase slpA (EC 5.2.1.8)	Peptidyl-prolyl_cis-trans_isomerase
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	Potassium_homeostasis	Peptidyl-prolyl_cis-trans_isomerase	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Flagellar assembly protein fliH	Flagellum
Flagellar basal-body P-ring formation protein flgA	Flagellum
Flagellar basal-body rod modification protein FlgD	Flagellum	Motility_of_Campylobacter
Flagellar basal-body rod protein flgB	Flagellum	Flagellum_in_Campylobacter
Flagellar basal-body rod protein flgC	Flagellum	Flagellum_in_Campylobacter
Flagellar basal-body rod protein flgF	Flagellum
Flagellar basal-body rod protein flgG	Flagellum
Flagellar biosynthesis protein flgN	Flagellum
Flagellar biosynthesis protein FlhA	Flagellum	Motility_of_Campylobacter
Flagellar biosynthesis protein FlhB	Flagellum	Motility_of_Campylobacter
Flagellar biosynthesis protein FlhF	Flagellum	Motility_of_Campylobacter
Flagellar biosynthesis protein fliC	Flagellum
Flagellar biosynthesis protein fliL	Flagellum
Flagellar biosynthesis protein fliO	Flagellum
Flagellar biosynthesis protein fliP	Flagellum
Flagellar biosynthesis protein fliQ	Flagellum
Flagellar biosynthesis protein FliR	Flagellum	Motility_of_Campylobacter	C_jejuni_colonization_of_chick_caeca
Flagellar biosynthesis protein fliS	Flagellum
Flagellar biosynthesis protein fliT	Flagellum
Flagellar biosynthesis protein fliZ	Flagellum
Flagella-related protein C flaC	Archaeal_Flagellum
Flagella-related protein DE flaD/flaE	Archaeal_Flagellum
Flagella-related protein D flaD	Archaeal_Flagellum
Flagella-related protein E flaE	Archaeal_Flagellum
Flagella-related protein F flaF	Archaeal_Flagellum
Flagella-related protein G flaG	Archaeal_Flagellum
Flagella-related protein H flaH	Archaeal_Flagellum
Flagella-related protein I flaI	Archaeal_Flagellum
Flagella-related protein J flaJ	Archaeal_Flagellum
Flagellar hook-associated protein 3	Flagellum
Flagellar hook-associated protein flgK	Flagellum	C_jejuni_colonization_of_chick_caeca
Flagellar hook-associated protein flgL	Flagellum
Flagellar hook-associated protein fliD	Flagellum
Flagellar hook-basal body complex protein fliE	Flagellum
Flagellar hook-length control protein fliK	Flagellum
Flagellar hook protein flgE	Flagellum
Flagellar hook subunit protein	Flagellum_in_Campylobacter
Flagellar L-ring protein FlgH	Flagellum	Motility_of_Campylobacter
Flagellar motor rotation protein MotA	Flagellum	Motility_of_Campylobacter	C_jejuni_colonization_of_chick_caeca
Flagellar motor rotation protein MotB	Flagellum	Motility_of_Campylobacter	CBSS-323098.3.peg.2823	C_jejuni_colonization_of_chick_caeca
Flagellar motor switch protein fliG	Bacterial_Chemotaxis	Flagellum
Flagellar motor switch protein FliM	Bacterial_Chemotaxis	Flagellum	Motility_of_Campylobacter
Flagellar motor switch protein FliN	Bacterial_Chemotaxis	Flagellum	Motility_of_Campylobacter
Flagellar M-ring protein fliF	Flagellum
Flagellar P-ring protein flgI	Flagellum
Flagellar protein flbB	Flagellum
Flagellar protein flbD	Flagellum
Flagellar protein flgJ [peptidoglycan hydrolase] (EC 3.2.1.-)	Flagellum
Flagellar protein flhE	Flagellum
Flagellar protein fliJ	Flagellum
Flagellar regulon repressor RtsB	Type_III_secretion_system_orphans
Flagellar sensor histidine kinase fleS	Flagellum
Flagellar sensory histidine kinase FlgS	Two-component_regulatory_systems_in_Campylobacter
Flagellar synthesis regulator FleN	Flagellum	Motility_of_Campylobacter
Flagellar trans-acting factor fliX	Flagellum
Flagellar transcriptional activator flhC	Flagellum
Flagellar transcriptional activator flhD	Flagellum
Flagellin	Motility_of_Campylobacter
Flagellin A	Flagellum_in_Campylobacter
Flagellin A1 flaA1	Archaeal_Flagellum
Flagellin A2 flaA2	Archaeal_Flagellum
Flagellin B	Flagellum_in_Campylobacter
Flagellin B1 flaB1	Archaeal_Flagellum
Flagellin B2 flaB2	Archaeal_Flagellum
Flagellin B3 flaB3	Archaeal_Flagellum
Flagellin B flaB	Archaeal_Flagellum
Flagellin C	Adhesion_of_Campylobacter
Flagellin protein FlaA	Flagellum
Flagellin protein flaB	Flagellum
Flagellin protein flaC	Flagellum
Flagellin protein flaD	Flagellum
Flagellin protein flaE	Flagellum
Flagellin protein flaF	Flagellum
Flagellin protein flaG	Flagellum
Flagellum-specific ATP synthase FliI	Flagellum	Motility_of_Campylobacter
Flap structure-specific endonuclease (EC 3.-.-.-)	DNA_Repair_Base_Excision	DNA_replication,_archaeal
Flavanone-3-hydroxylase (EC 1.14.11.9)	Flavanone_biosynthesis	Biflavanoid_biosynthesis
Flavanone-3-hydroxylase (EC 1.14.13.21)	Biflavanoid_biosynthesis
Flavocytochrome c flavin subunit	Flavocytochrome_C
Flavocytochrome c heme subunit	Flavocytochrome_C
Flavodoxin	Flavodoxin
Flavodoxin 1	Flavodoxin
Flavodoxin 2	Flavodoxin
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1	Anaerobic_respiratory_reductases	YgfZ
Flavohemoprotein	Nitrosative_stress
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	Flavohaemoglobin	Bacterial_hemoglobins	Glutaredoxins
flavonoid 7-O-methyltransferase (EC 2.1.1.75)	Phytoalexin_biosynthesis
Flavonol 3-sulfotransferase (EC 2.8.2.25)	Auxin_biosynthesis
Flavoprotein MioC	Flavodoxin
Flp pilus assembly membrane protein TadE	Widespread_colonization_island
Flp pilus assembly protein CpaD	Widespread_colonization_island
Flp pilus assembly protein, pilin Flp	Widespread_colonization_island
Flp pilus assembly protein RcpB	Widespread_colonization_island
Flp pilus assembly protein RcpC/CpaB	Widespread_colonization_island
Flp pilus assembly protein TadB	Widespread_colonization_island
Flp pilus assembly protein TadD, contains TPR repeat	Widespread_colonization_island
Flp pilus assembly surface protein TadF, ATP/GTP-binding motif	Widespread_colonization_island
FmhA protein of FemAB family	Methicillin_resistance_in_Staphylococci
FmhB protein of FemAB family involved in peptidoglycan interpeptide biosynthesis	Methicillin_resistance_in_Staphylococci
FmhC protein of FemAB family	Methicillin_resistance_in_Staphylococci
FMN adenylyltransferase (EC 2.7.7.2)	riboflavin_to_FAD	Riboflavin,_FMN_and_FAD_metabolism	CBSS-350688.3.peg.1509
FMN adenylyltransferase, type 2 eukaryotic (EC 2.7.7.2)	riboflavin_to_FAD	Riboflavin,_FMN_and_FAD_metabolism
FMN reductase (EC 1.5.1.29)	Alkanesulfonate_assimilation	Alkanesulfonates_Utilization
FmtA protein involved in methicillin resistance	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Methicillin_resistance_in_Staphylococci
FmtB (Mrp) protein involved in methicillin resistance and cell wall biosynthesis	Methicillin_resistance_in_Staphylococci
FmtC (MrpF) protein involved in methicillin resistance	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Methicillin_resistance_in_Staphylococci
FO biosynthesis ArfB	Riboflavin,_FMN_and_FAD_metabolism
Folate biosynthesis, PTPS-III	Folate_Biosynthesis	Methanopterin_biosynthesis2
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	YgfZ
Folate transporter 1	Folate_Biosynthesis
Folate transporter 3	Folate_transporters	Folate_Biosynthesis
Foldase protein PrsA precursor (EC 5.2.1.8)	Peptidyl-prolyl_cis-trans_isomerase	CBSS-176279.3.peg.1262
FolM Alternative dihydrofolate reductase 1	Pterin_metabolism_3	Folate_Biosynthesis
Folylpolyglutamate synthase (EC 6.3.2.17)	Colicin_V_and_Bacteriocin_Production_Cluster	Folate_Biosynthesis
Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent (EC 1.2.1.66)	Glutathione_analogs:_mycothiol
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	DNA_Repair_Base_Excision
Formate dehydrogenase alpha subunit (EC 1.2.1.2)	Formate_dehydrogenase
Formate dehydrogenase beta subunit (EC 1.2.1.2)	Formate_dehydrogenase
Formate dehydrogenase beta subunit (EC 1.2.1.43)	Acetyl-CoA_pathway_of_CO2_fixation
Formate dehydrogenase chain D (EC 1.2.1.2)	Formate_hydrogenase
formate dehydrogenase formation protein FdhE	Bacterial_cyanide_production_and_tolerance_mechanisms	Formate_hydrogenase
Formate dehydrogenase H (EC 1.2.1.2)	Formate_dehydrogenase
Formate dehydrogenase H (EC 1.2.1.2); selenocysteine-containing	Formate_hydrogenase
Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	Formate_dehydrogenase	Formate_hydrogenase
Formate dehydrogenase N alpha subunit (EC 1.2.1.2); selenocysteine-containing	Formate_hydrogenase
Formate dehydrogenase N beta subunit (EC 1.2.1.2)	Formate_dehydrogenase	Formate_hydrogenase
Formate dehydrogenase N gamma subunit (EC 1.2.1.2)	Formate_dehydrogenase	Formate_hydrogenase
Formate dehydrogenase O alpha subunit (EC 1.2.1.2)	Formate_dehydrogenase	Bacterial_cyanide_production_and_tolerance_mechanisms	Formate_hydrogenase
Formate dehydrogenase O beta subunit (EC 1.2.1.2)	Formate_dehydrogenase	Bacterial_cyanide_production_and_tolerance_mechanisms	Formate_hydrogenase
Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	Anaerobic_respiratory_reductases	Formate_hydrogenase
Formate dehydrogenase O gamma subunit (EC 1.2.1.2)	Formate_dehydrogenase	Bacterial_cyanide_production_and_tolerance_mechanisms	Formate_hydrogenase
Formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2)	Formate_hydrogenase
Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	Formate_hydrogenase	YgfZ
Formate dehydrogenase O putative subunit	Formate_hydrogenase
Formate dehydrogenase putative subunit (EC 1.2.1.2)	Formate_hydrogenase
Formate dehydrogenase related protein	Formate_hydrogenase
Formate efflux transporter (TC 2.A.44 family)	Fermentations:_Mixed_acid	Formate_hydrogenase
Formate hydrogenlyase hypothetical subunit	Formate_hydrogenase
Formate hydrogenlyase regulatory protein HycA	Formate_hydrogenase
Formate hydrogenlyase subunit 2	Formate_hydrogenase
Formate hydrogenlyase subunit 3	Formate_hydrogenase
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit	Formate_hydrogenase
Formate hydrogenlyase subunit 4	Formate_hydrogenase
Formate hydrogenlyase subunit 5	Formate_hydrogenase
Formate hydrogenlyase subunit 6	Formate_hydrogenase
Formate hydrogenlyase subunit 7	Formate_hydrogenase
Formate hydrogenlyase transcriptional activator	Formate_hydrogenase
Formate--tetrahydrofolate ligase (EC 6.3.4.3)	One-carbon_metabolism_by_tetrahydropterines	Folate_Biosynthesis	5-FCL-like_protein	Serine-glyoxylate_cycle
Formate-tetrahydrofolate ligase (EC 6.3.4.3)	Acetyl-CoA_pathway_of_CO2_fixation
Formiminoglutamase (EC 3.5.3.8)	Histidine_Degradation
Formiminoglutamic iminohydrolase (EC 3.5.3.13)	Histidine_Degradation
Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	Histidine_Degradation	One-carbon_metabolism_by_tetrahydropterines	5-FCL-like_protein	Serine-glyoxylate_cycle
Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9)	Type_4_secretion_and_conjugative_transfer
Formylmethanofuran dehydrogenase (molybdenum) operon gene E	Methanogenesis
Formylmethanofuran dehydrogenase (molybdenum) operon gene F (polyferredoxin)	Methanogenesis
Formylmethanofuran dehydrogenase (molybdenum) operon gene G	Methanogenesis
Formylmethanofuran dehydrogenase (molybdenum) subunit B (EC 1.2.99.5)	Methanogenesis
Formylmethanofuran dehydrogenase (molybdenum) subunit C (EC 1.2.99.5)	Methanogenesis
Formylmethanofuran dehydrogenase (molybdenum) subunit D (EC 1.2.99.5)	Methanogenesis
Formylmethanofuran dehydrogenase subunit A (EC 1.2.99.5)	Methanogenesis
Formylmethanofuran dehydrogenase subunit B (EC 1.2.99.5)	Methanogenesis
Formylmethanofuran dehydrogenase subunit C (EC 1.2.99.5)	Methanogenesis
Formylmethanofuran dehydrogenase subunit D (EC 1.2.99.5)	Methanogenesis
Formylmethanofuran dehydrogenase (tungsten) operon gene F (polyferredoxin)	Methanogenesis
Formylmethanofuran dehydrogenase (tungsten) operon gene G	Methanogenesis
Formylmethanofuran dehydrogenase (tungsten) operon gene H	Methanogenesis
Formylmethanofuran dehydrogenase (tungsten) subunit B (EC 1.2.99.5)	Methanogenesis
Formylmethanofuran dehydrogenase (tungsten) subunit C (EC 1.2.99.5)	Methanogenesis	ABC_transporter_tungstate_(TC_3.A.1.6.2)
Formylmethanofuran dehydrogenase (tungsten) subunit D (EC 1.2.99.5)	Methanogenesis
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase (EC 2.3.1.101)	Methanogenesis
Formyltetrahydrofolate deformylase (EC 3.5.1.10)	One-carbon_metabolism_by_tetrahydropterines	Folate_transporters	5-FCL-like_protein
Formyltetrahydrofolate synthetase (EC 6.3.4.3)	Serine-glyoxylate_cycle
Fosfomycin resistance protein FosA	Fosfomycin_resistance
Fosfomycin resistance protein FosB	Fosfomycin_resistance
Fosfomycin resistance protein FosX	Fosfomycin_resistance
Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly	Biogenesis_of_cytochrome_c_oxidases
Frataxin, mitochondrial precursor, facilitates iron supply for heme A synthesis or Fe-S cluster assembly	Biogenesis_of_cytochrome_c_oxidases
Free methionine-(R)-sulfoxide reductase, fRMsr	CBSS-221988.1.peg.771
Fructanase (EC 3.2.1.80), FruA / Levanase (EC 3.2.1.65)	Fructose_and_Mannose_Inducible_PTS
Fructokinase (EC 2.7.1.4)	Sucrose_Metabolism	Sucrose_utilization_Shewanella	Ribitol,_Xylitol,_Arabitol,_Mannitol_and_Sorbitol_utilization	Fructose_utilization	Mannitol_Utilization	Sucrose_utilization
Fructokinase FrcK (EC 2.7.1.4)	Fructose_utilization
Fructokinase in mannitol utilization gene cluster (EC 2.7.1.4)	Mannitol_Utilization
Fructokinase in mannoside utilization gene cluster (EC 2.7.1.4)	Mannose_Metabolism
Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	Calvin-Benson_cycle	Glycolysis_and_Gluconeogenesis
Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	Calvin-Benson_cycle	Glycolysis_and_Gluconeogenesis	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	Calvin-Benson_cycle	Cluster_Ytf_and_putative_sugar_transporter	Putative_sugar_ABC_transporter_(ytf_cluster)	Glycolysis_and_Gluconeogenesis	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Fructose-1,6-bisphosphatase, type V, archaeal (EC 3.1.3.11)	Calvin-Benson_cycle	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Fructose-6-phosphate phosphoketolase (EC 4.1.2.22)	Fermentations:_Lactate	Pentose_phosphate_pathway
Fructose ABC transporter, ATP-binding component FrcA	Fructose_utilization
Fructose ABC transporter, permease component FrcC	Fructose_utilization
Fructose ABC transporter, substrate-binding component FrcB	Fructose_utilization
Fructose-bisphosphate aldolase, archaeal class I (EC 4.1.2.13)	Hexitol_degradation	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Glycolysis_and_Gluconeogenesis	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	Calvin-Benson_cycle	Hexitol_degradation	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Glycolysis_and_Gluconeogenesis
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	Calvin-Benson_cycle	Hexitol_degradation	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Glycolysis_and_Gluconeogenesis
Fructose-bisphosphate aldolase (EC 4.1.2.13)	Unknown_carbohydrate_utilization_containing_Fructose-bisphosphate_aldolase
Fructoselysine 3-epimerase	Fructoselysine_(Amadori_product)_utilization_pathway
Fructoselysine 6-phosphate deglycase (EC 3.5.-.-)	Fructoselysine_(Amadori_product)_utilization_pathway
Fructoselysine kinase (EC 2.7.1.-)	Fructoselysine_(Amadori_product)_utilization_pathway
Fructoselysine transporter FrlA, cationic amino acid permease	Fructoselysine_(Amadori_product)_utilization_pathway
Fructose repressor FruR, LacI family	Fructose_utilization
fructose response regulator of fruA and EII fructose/mannose	Fructose_and_Mannose_Inducible_PTS
fructose sensor histidine kinase	Fructose_and_Mannose_Inducible_PTS
Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69)	Fructose_utilization
FtsK/SpoIIIE family protein, putative secretion system component EssC/YukA	ESAT-6_proteins_secretion_system_in_Firmicutes
FtsK/SpoIIIE family protein Rv3870, component of ESX-1 secretion system	ESAT-6_proteins_secretion_system_in_Actinobacteria
FtsK/SpoIIIE family protein Rv3871, component of ESX-1 secretion system	ESAT-6_proteins_secretion_system_in_Actinobacteria
Fucose permease	L-fucose_utilization	L-fucose_utilization_temp
Fumarate and nitrate reduction regulatory protein	Oxidative_stress
Fumarate hydratase class I, aerobic (EC 4.2.1.2)	TCA_Cycle	Serine-glyoxylate_cycle	YgfZ
Fumarate hydratase class I, anaerobic (EC 4.2.1.2)	TCA_Cycle	CBSS-83333.1.peg.4037	Serine-glyoxylate_cycle
Fumarate hydratase class I (EC 4.2.1.2)	TCA_Cycle
Fumarate hydratase class II (EC 4.2.1.2)	TCA_Cycle
Fumarate reductase cytochrome b subunit	Succinate_dehydrogenase
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)	Succinate_dehydrogenase
Fumarate reductase subunit C	Succinate_dehydrogenase
Fumarate reductase subunit D	Succinate_dehydrogenase
fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase	Succinate_dehydrogenase
Fumarylacetoacetase (EC 3.7.1.2)	Salicylate_and_gentisate_catabolism	Pterin_metabolism_3	Pterin_carbinolamine_dehydratase	Homogentisate_pathway_of_aromatic_compound_degradation	Gentisare_degradation
Fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.5)	Salicylate_and_gentisate_catabolism
Fumarylacetoacetate (FAA) hydrolase (EC 4.1.1.68)	Salicylate_and_gentisate_catabolism
Fumarylacetoacetate hydrolase family protein	Salicylate_and_gentisate_catabolism	Pterin_metabolism_3	Pterin_carbinolamine_dehydratase	Benzoate_transport_and_degradation_cluster	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	CBSS-243277.1.peg.4359	Gentisare_degradation
Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR	Flavohaemoglobin	Nitrosative_stress
Functional role page for Chaperone protein TorD	trimethylamine_N-oxide_(TMAO)_reductase
Functional role page for Cytochrome c-type protein TorC	trimethylamine_N-oxide_(TMAO)_reductase
Functional role page for Cytochrome c-type protein TorY	trimethylamine_N-oxide_(TMAO)_reductase
Functional role page for TorCAD operon transcriptional regulatory protein TorR	trimethylamine_N-oxide_(TMAO)_reductase
GABA aminotransferase (EC 2.6.1.19)	GABA_and_putrescine_metabolism_from_cluters
GAF domain/GGDEF domain/EAL domain protein	CBSS-323850.3.peg.3284
Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)	D-Tagatose_and_Galactitol_Utilization
Galactitol utilization operon repressor	D-Tagatose_and_Galactitol_Utilization
Galactocerebrosidase precursor (EC 3.2.1.46)	Galactosylceramide_and_Sulfatide_metabolism
Galactokinase (EC 2.7.1.6)	Lactose_and_Galactose_Uptake_and_Utilization
Galactonate dehydratase (EC 4.2.1.6)	D-galactonate_catabolism
Galactosamine-6-phosphate isomerase (galactosamine-6-phosphate deaminase) (EC 5.3.1.-)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
galactosamine-containing minor teichoic acid biosynthesis protein	Teichoic_and_lipoteichoic_acids_biosynthesis
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	Lactose_and_Galactose_Uptake_and_Utilization
Galactose-3-O-sulfotransferase 3 (EC 2.8.2.-)	Galactosylceramide_and_Sulfatide_metabolism
Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)	Lactose_and_Galactose_Uptake_and_Utilization
Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)	Lactose_and_Galactose_Uptake_and_Utilization
Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	Lactose_and_Galactose_Uptake_and_Utilization
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	Lactose_and_Galactose_Uptake_and_Utilization	Bacterial_Chemotaxis
Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	Lactose_and_Galactose_Uptake_and_Utilization
Galactose operon repressor, GalR-LacI family of transcriptional regulators	Lactose_and_Galactose_Uptake_and_Utilization
Galactose permease	Lactose_and_Galactose_Uptake_and_Utilization
Galactoside O-acetyltransferase (EC 2.3.1.18)	Lactose_utilization
Galactosylceramide sulfotransferase (EC 2.8.2.11)	Galactosylceramide_and_Sulfatide_metabolism
Galactosyl transferase CpsE (EC 2.7.8.-)	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Streptococcus_agalactiae_virulome
GALNS arylsulfatase regulator (Fe-S oxidoreductase)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Putrescine_utilization_pathways
gamma-carotene desaturase, putative	Carotenoids
gamma-carotene hydroxylase	Carotenoids
Gamma-D-Glutamyl-meso-Diaminopimelate Amidase	Recycling_of_Peptidoglycan_Amino_Acids
Gamma-DL-glutamyl hydrolase PgsS (EC 3.4.19.-), catalyzes PGA release	Poly-gamma-glutamate_biosynthesis
Gamma-glutamyl-aminobutyraldehyde dehydrogenase (EC 1.2.1.-)	Putrescine_utilization_pathways	GABA_and_putrescine_metabolism_from_cluters
Gamma-glutamyl cyclotransferase (EC 2.3.2.4)	Glutathione_Redox_Metabolism_3	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle
Gamma-glutamyl-GABA hydrolase	GABA_and_putrescine_metabolism_from_cluters
Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94)	Putrescine_utilization_pathways
Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	Proline,_4-hydroxyproline_uptake_and_utilization	YgfZ	Proline_Synthesis
Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)	Putrescine_utilization_pathways	GABA_and_putrescine_metabolism_from_cluters
Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)	Putrescine_utilization_pathways	GABA_and_putrescine_metabolism_from_cluters
Gamma-glutamyltranspeptidase (EC 2.3.2.2)	Glutathione_Redox_Metabolism_3	Poly-gamma-glutamate_biosynthesis	Utilization_of_glutathione_as_a_sulphur_source	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle
Gamma-glutamyltranspeptidase PgsD/CapD (EC 2.3.2.2), catalyses PGA anchorage to peptidoglycan	Poly-gamma-glutamate_biosynthesis
Gamma-hemolysin component A	Staphylococcus_Two-component_and_Pore-forming_Cytolysins
Gamma-hemolysin component B	Staphylococcus_Two-component_and_Pore-forming_Cytolysins
Gamma-hemolysin component C	Staphylococcus_Two-component_and_Pore-forming_Cytolysins
Gamma-tocopherol C-methyltransferase (EC 2.1.1.95)	Plastoquinone_Biosynthesis	Tocopherol_Biosynthesis
GatB protein	Macromolecular_synthesis_operon
GCN5-related N-acetyltransferase, FIGfam019367	CBSS-83331.1.peg.3039
GDP-L-fucose synthetase (EC 1.1.1.271)	Capsular_heptose_biosynthesis	Colanic_acid_biosynthesis
GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	Capsular_heptose_biosynthesis	Perosamine_Synthesis_Vibrio	Colanic_acid_biosynthesis
GDP-mannose 6-dehydrogenase (EC 1.1.1.132)	Alginate_metabolism
GDP-mannose mannosyl hydrolase (EC 3.6.1.-)	Colanic_acid_biosynthesis	Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mannose_Metabolism
GDP-mannose pyrophosphatase YffH	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
GDSL-like lipase/acylhydrolase	Serine-glyoxylate_cycle
General secretion pathway protein C	CBSS-350701.3.peg.3277
General secretion pathway protein D	CBSS-350701.3.peg.3277
General secretion pathway protein E	CBSS-350701.3.peg.3277
General secretion pathway protein F	CBSS-350701.3.peg.3277
General secretion pathway protein G	CBSS-350701.3.peg.3277
General secretion pathway protein H	CBSS-350701.3.peg.3277
General secretion pathway protein I	CBSS-350701.3.peg.3277
General secretion pathway protein J	CBSS-350701.3.peg.3277
Gene SCO4494, often clustered with other genes in menaquinone via futalosine pathway	Menaquinone_Biosynthesis_via_Futalosine
Gentisate 1,2-dioxygenase (EC 1.13.11.4)	Salicylate_and_gentisate_catabolism	Gentisare_degradation
Geranyl-CoA carboxylase biotin-containing subunit	Acyclic_terpenes_utilization
Geranyl-CoA carboxylase carboxyl transferase subunit	Acyclic_terpenes_utilization
Geranylgeranyl hydrogenase BchP	Chlorophyll_Biosynthesis
Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)	Carotenoids	Polyprenyl_Diphosphate_Biosynthesis	Archaeal_lipids
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10)	Carotenoids	Polyprenyl_Diphosphate_Biosynthesis	Isoprenoid_Biosynthesis:_Interconversions	Archaeal_lipids	Isoprenoid_Biosynthesis
Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD	Spore_germination
GftB: Glycosyl transferase, family 8	SecY2-SecA2_Specialized_Transport_System
GGDEF and EAL domain proteins	CBSS-323850.3.peg.3284
GGDEF/EAL domain protein YhjH	Inner_membrane_protein_YhjD_and_conserved_cluster_involved_in_LPS_biosynthesis
(GlcNAc)2 ABC transporter, ATP-binding component 1	(GlcNAc)2_Catabolic_Operon
(GlcNAc)2 ABC transporter, ATP-binding component 2	(GlcNAc)2_Catabolic_Operon
(GlcNAc)2 ABC transporter, periplasmic substrate-binding protein	(GlcNAc)2_Catabolic_Operon
(GlcNAc)2 ABC transporter, permease component 1	(GlcNAc)2_Catabolic_Operon
(GlcNAc)2 ABC transporter, permease component 2	(GlcNAc)2_Catabolic_Operon
GlcNAc phosphomutase (EC 5.4.2.3)	(GlcNAc)2_Catabolic_Operon
GldB	Bacterial_motility:Gliding
GldD	Bacterial_motility:Gliding
GldI	Bacterial_motility:Gliding
GldJ	Bacterial_motility:Gliding
Gliding motility protein (GldA) related protein	Bacterial_motility:Gliding
gliding motility protein GldF	Bacterial_motility:Gliding
gliding motility protein GldG	Bacterial_motility:Gliding
gliding motility protein MglA	Bacterial_motility:Gliding
Global nitrogen regulatory protein, CRP family of transcriptional regulators	Heterocyst_formation_in_cyanobacteria	Ammonia_assimilation
GltC, transcription activator of glutamate synthase operon	DNA-binding_regulatory_proteins,_strays
Glucan 1,6-alpha-glucosidase (EC 3.2.1.70)	Fructooligosaccharides(FOS)_and_Raffinose_Utilization
Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)	Synthesis_of_osmoregulated_periplasmic_glucans
Glucans biosynthesis protein C (EC 2.1.-.-)	Synthesis_of_osmoregulated_periplasmic_glucans
Glucans biosynthesis protein D precursor	Synthesis_of_osmoregulated_periplasmic_glucans
Glucans biosynthesis protein G precursor	Synthesis_of_osmoregulated_periplasmic_glucans
Glucarate dehydratase (EC 4.2.1.40)	D-galactarate,_D-glucarate_and_D-glycerate_catabolism
Glucitol operon activator protein	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
Glucitol operon GutQ protein	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
Glucitol operon repressor	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
Glucoamylase (EC 3.2.1.3)	Maltose_and_Maltodextrin_Utilization	Trehalose_Biosynthesis
Glucokinase (EC 2.7.1.2)	Sucrose_Metabolism	Sugar_utilization_in_Thermotogales	Glycolysis_and_Gluconeogenesis	Sugar_utilization_in_Thermotoga	Entner-Doudoroff_Pathway
Glucokinase, ROK family (EC 2.7.1.2)	Beta-Glucoside_Metabolism
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c	D-gluconate_and_ketogluconates_metabolism
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein	D-gluconate_and_ketogluconates_metabolism
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit	D-gluconate_and_ketogluconates_metabolism
Gluconate dehydratase (EC 4.2.1.39)	D-gluconate_and_ketogluconates_metabolism	Entner-Doudoroff_Pathway
Gluconate operon transcriptional repressor	D-gluconate_and_ketogluconates_metabolism
Gluconate permease, Bsu4004 homolog	D-gluconate_and_ketogluconates_metabolism
Gluconate transporter family protein	D-gluconate_and_ketogluconates_metabolism
Gluconate utilization system Gnt-I transcriptional repressor	D-gluconate_and_ketogluconates_metabolism	Entner-Doudoroff_Pathway
Gluconokinase (EC 2.7.1.12)	D-gluconate_and_ketogluconates_metabolism	Sugar_utilization_in_Thermotoga	Entner-Doudoroff_Pathway
Gluconolactonase (EC 3.1.1.17)	Entner-Doudoroff_Pathway
Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Peptidoglycan_Biosynthesis	Sialic_Acid_Metabolism
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Chitin_and_N-acetylglucosamine_utilization	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Sialic_Acid_Metabolism
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)	Chitin_and_N-acetylglucosamine_utilization	Sugar_utilization_in_Thermotogales	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway
Glucosamine 6-phosphate N-acetyltransferase (EC 2.3.1.4)	UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	CBSS-261591.3.peg.3916	UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Sialic_Acid_Metabolism
Glucosamine kinase GpsK (EC 2.7.1.8)	(GlcNAc)2_Catabolic_Operon
Glucosamine-link cellobiase (EC 3.2.1.21)	(GlcNAc)2_Catabolic_Operon
Glucose 1-dehydrogenase (EC 1.1.1.47)	D-gluconate_and_ketogluconates_metabolism	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	Sucrose_Metabolism	Glycogen_metabolism
Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33)	dTDP-rhamnose_synthesis	Acetoin,_butanediol_metabolism
Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	dTDP-rhamnose_synthesis	linker_unit-arabinogalactan_synthesis	Rhamnose_containing_glycans
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Fermentations:_Lactate	Glycolysis_and_Gluconeogenesis	Sugar_utilization_in_Thermotoga	Entner-Doudoroff_Pathway	Pentose_phosphate_pathway
Glucose-6-phosphate isomerase, archaeal (EC 5.3.1.9)	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Glucose-6-phosphate isomerase, archaeal II (EC 5.3.1.9)	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Glycolysis_and_Gluconeogenesis	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Glucose-6-phosphate isomerase (EC 5.3.1.9)	Sucrose_Metabolism	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	Glycolysis_and_Gluconeogenesis	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, cytochrome c	D-gluconate_and_ketogluconates_metabolism
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, flavoprotein	D-gluconate_and_ketogluconates_metabolism
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, gamma subunit	D-gluconate_and_ketogluconates_metabolism
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2)	Respiratory_dehydrogenases_1	D-gluconate_and_ketogluconates_metabolism	Entner-Doudoroff_Pathway
GLUCOSE-FRUCTOSE OXIDOREDUCTASE (EC 1.1.99.28)	CBSS-479435.4.peg.2736
Glucose/mannose:H+ symporter GlcP	Trehalose_Uptake_and_Utilization
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site	Respiratory_dehydrogenases_1
Glucuronide transporter UidB	beta-glucuronide_utilization
Glucuronide transport facilitator UidC	beta-glucuronide_utilization
Glucuronide transport protein YihO	O-antigen_capsule_important_for_environmental_persistence
Glucuronide transport protein YihP, homologous to YihO	O-antigen_capsule_important_for_environmental_persistence
Glutaconyl-CoA decarboxylase alpha chain (EC 4.1.1.70)	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Glutaconyl-CoA decarboxylase beta chain (EC 4.1.1.70)	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Glutaconyl-CoA decarboxylase delta chain (EC 4.1.1.70)	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Heme_and_Siroheme_Biosynthesis	Experimental_tye	CBSS-196164.1.peg.461
Glutamate 5-kinase (EC 2.7.2.11)	Proline,_4-hydroxyproline_uptake_and_utilization	Proline_Synthesis
Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	CBSS-316057.3.peg.3521	Ammonia_assimilation
Glutamate Aspartate periplasmic binding protein precursor gltI (TC 3.A.1.3.4)	ABC_transporter_glutamate_aspartate_(TC_3.A.1.3.4)
Glutamate Aspartate transport ATP-binding protein gltL (TC 3.A.1.3.4)	ABC_transporter_glutamate_aspartate_(TC_3.A.1.3.4)
Glutamate Aspartate transport system permease protein gltJ (TC 3.A.1.3.4)	ABC_transporter_glutamate_aspartate_(TC_3.A.1.3.4)
Glutamate Aspartate transport system permease protein gltK (TC 3.A.1.3.4)	ABC_transporter_glutamate_aspartate_(TC_3.A.1.3.4)
Glutamate--cysteine ligase (EC 6.3.2.2)	Cyanophycin_Metabolism	Glutathione_synthesis	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione:_Non-redox_reactions
Glutamate--cysteine ligase (EC 6.3.2.2), divergent, of Alpha- and Beta-proteobacteria type	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione:_Non-redox_reactions
Glutamate--cysteine ligase eukaryotic (EC 6.3.2.2)	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione:_Non-redox_reactions
Glutamate formiminotransferase (EC 2.1.2.5)	Histidine_Degradation	5-FCL-like_protein
Glutamate-glyoxylate aminotransferase (EC 2.6.1.4)	Photorespiration_(oxidative_C2_cycle)
Glutamate/malate translocator DiT2.1, plastidic	Photorespiration_(oxidative_C2_cycle)
Glutamate N-acetyltransferase (EC 2.3.1.35)	Arginine_Biosynthesis_extended	Arginine_Biosynthesis
Glutamate-pyruvate aminotransferase (EC 2.6.1.2)	Alanine_biosynthesis
Glutamate racemase (EC 5.1.1.3)	Poly-gamma-glutamate_biosynthesis	Peptidoglycan_Biosynthesis	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Peptidoglycan_Biosynthesis_2
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Ammonia_assimilation
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	YgfZ	Ammonia_assimilation
Glutaminase (EC 3.5.1.2)	Acid_resistance_mechanisms	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis
Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)	ABC_transporter_glutamine_(TC_3.A.1.3.2)
Glutamine amidotransferase chain of NAD synthetase	NAD_and_NADP_cofactor_biosynthesis_global
Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase	Methionine_Salvage
Glutamine synthetase, clostridia type (EC 6.3.1.2)	Glutamine_synthetases	Peptidoglycan_Biosynthesis	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Peptidoglycan_Biosynthesis_2	Ammonia_assimilation
Glutamine synthetase (EC 6.3.1.2)	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis
glutamine synthetase family protein	Glutamine_synthetases	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis
Glutamine synthetase family protein in hypothetical Actinobacterial gene cluster	CBSS-262316.1.peg.2929
Glutamine synthetase inactivating factor IF17	Ammonia_assimilation
Glutamine synthetase inactivating factor IF7	Ammonia_assimilation
Glutamine synthetase type I (EC 6.3.1.2)	Glutamine_synthetases	Peptidoglycan_Biosynthesis	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Photorespiration_(oxidative_C2_cycle)	Peptidoglycan_Biosynthesis_2	Ammonia_assimilation
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2)	Glutamine_synthetases	Peptidoglycan_Biosynthesis	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Peptidoglycan_Biosynthesis_2	Ammonia_assimilation
Glutamine synthetase type III, GlnN (EC 6.3.1.2)	Glutamine_synthetases	Peptidoglycan_Biosynthesis	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Peptidoglycan_Biosynthesis_2	Ammonia_assimilation
Glutamine transport ATP-binding protein glnQ (TC 3.A.1.3.2)	ABC_transporter_glutamine_(TC_3.A.1.3.2)
Glutamine transport system permease protein glnP (TC 3.A.1.3.2)	ABC_transporter_glutamine_(TC_3.A.1.3.2)
Glutaminyl-tRNA synthetase (EC 6.1.1.18)	tRNA_aminoacylation	Asp-tRNA(Asn)_transamidation	Glu-tRNA(Gln)_transamidation
Glutaminyl-tRNA synthetase (EC 6.1.1.18), mitochondrial	tRNA_aminoacylation,_mitochondrial
glutamyl-Q-tRNA synthetase	tRNA_modification_Bacteria	Queuosine-Archaeosine_Biosynthesis
Glutamyl-tRNA(Gln) amidotransferase asparaginase subunit (EC 6.3.5.-)	Glu-tRNA(Gln)_transamidation
Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)	Glu-tRNA(Gln)_transamidation	CBSS-393133.3.peg.695
Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.-)	Glu-tRNA(Gln)_transamidation	CBSS-393133.3.peg.695
Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.-)	Glu-tRNA(Gln)_transamidation	CBSS-393133.3.peg.695
Glutamyl-tRNA(Gln) amidotransferase transferase subunit (EC 6.3.5.-)	Glu-tRNA(Gln)_transamidation
Glutamyl-tRNA(Gln) synthetase	Glu-tRNA(Gln)_transamidation
Glutamyl-tRNA reductase (EC 1.2.1.70)	Heme_and_Siroheme_Biosynthesis	Experimental_tye	A_Gammaproteobacteria_Cluster_Relating_to_Translation
Glutamyl-tRNA synthetase (EC 6.1.1.17)	Heme_and_Siroheme_Biosynthesis	tRNA_aminoacylation	Glu-tRNA(Gln)_transamidation
Glutamyl-tRNA synthetase (EC 6.1.1.17), mitochondrial	tRNA_aminoacylation,_mitochondrial
Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20)	Lysine_degradation
Glutaredoxin	Flavohaemoglobin	Glutathione_Redox_Metabolism_3	Glutathione:_Redox_cycle	Glutaredoxins
Glutaredoxin 1	Glutathione_Redox_Metabolism_3	Glutathione:_Redox_cycle	Glutaredoxins
Glutaredoxin 2	Glutathione_Redox_Metabolism_3	Glutathione:_Redox_cycle	Glutaredoxins
Glutaredoxin 3	Glutathione_Redox_Metabolism_3	CBSS-216591.1.peg.168	Glutathione:_Redox_cycle	Glutaredoxins
Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib	Ribonucleotide_reduction	Glutathione:_Redox_cycle	Glutaredoxins
Glutaredoxin-related protein	Glutathione:_Redox_cycle	Glutaredoxins
Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3)	Glutathione_synthesis	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione:_Non-redox_reactions
Glutathione-dependent formaldehyde-activating enzyme (EC 4.4.1.22)	Glutathione-dependent_pathway_of_formaldehyde_detoxification
Glutathione peroxidase (EC 1.11.1.9)	Glutathione_Redox_Metabolism_3	Glutathione:_Redox_cycle
Glutathione reductase (EC 1.8.1.7)	Glutathione_Redox_Metabolism_3	Glutathione:_Redox_cycle
Glutathione-regulated potassium-efflux system ancillary protein KefF	Potassium_homeostasis	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Glutathione-regulated potassium-efflux system ancillary protein KefG	Potassium_homeostasis	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Glutathione-regulated potassium-efflux system ATP-binding protein	Potassium_homeostasis	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Glutathione-regulated potassium-efflux system protein kefB	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Glutathione-regulated potassium-efflux system protein KefC	Potassium_homeostasis	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Glutathione-regulated potassium-efflux system protein KefKL	Potassium_homeostasis	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Glutathione S-transferase, alpha (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, delta (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase domain protein	CBSS-89187.3.peg.2957
Glutathione S-transferase (EC 2.5.1.18)	cAMP_signaling_in_bacteria	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, epsilon (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase family protein	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, kappa (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, mu (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase N-terminal domain protein (EC 2.5.1.18)	CBSS-216591.1.peg.168
Glutathione S-transferase, omega (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	CBSS-89187.3.peg.2957	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein	Glutathione:_Non-redox_reactions
Glutathione S-transferase, phi (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, pi (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, Streptococcal type (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, theta (EC 2.5.1.18)	cAMP_signaling_in_bacteria	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, unnamed subgroup 2 (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione S-transferase, zeta (EC 2.5.1.18)	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Glutathione synthetase (EC 6.3.2.3)	Heat_shock_dnaK_gene_cluster_extended	CBSS-320372.3.peg.6046	Glutathione_synthesis	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione:_Non-redox_reactions	Glutaredoxins
Glutathionylspermidine amidohydrolase (EC 3.5.1.78)	Glutathionylspermidine_and_Trypanothione
Glutathionylspermidine synthase (EC 6.3.1.8)	Glutathionylspermidine_and_Trypanothione
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) (GAPDH)	Redox-dependent_regulation_of_nucleus_processes
Glyceraldehyde-3-phosphate: ferredoxin oxidoreductase (EC 1.2.7.6)	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Glyceraldehyde-3-phosphate ketol-isomerase (EC 5.3.1.1)	Inositol_catabolism
Glycerate kinase (EC 2.7.1.31)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Allantoin_degradation	D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Allantoin_Utilization	Glycerate_metabolism	Photorespiration_(oxidative_C2_cycle)	Serine-glyoxylate_cycle	Glycine_and_Serine_Utilization
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria
Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	Teichoic_and_lipoteichoic_acids_biosynthesis	Rhamnose_containing_glycans
Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	Respiratory_dehydrogenases_1	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glutaredoxins
Glycerol-3-phosphate regulon repressor, DeoR family	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycerol-3-phosphate transporter	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycerol dehydratase large subunit (EC 4.2.1.30)	Propanediol_utilization	Glycerol_fermenation_to_1,3-propanediol
Glycerol dehydratase medium subunit (EC 4.2.1.30)	Propanediol_utilization	Glycerol_fermenation_to_1,3-propanediol
Glycerol dehydratase reactivation factor large subunit	Glycerol_fermenation_to_1,3-propanediol
Glycerol dehydratase reactivation factor small subunit	Glycerol_fermenation_to_1,3-propanediol
Glycerol dehydratase small subunit (EC 4.2.1.30)	Propanediol_utilization	Glycerol_fermenation_to_1,3-propanediol
Glycerol dehydrogenase (EC 1.1.1.6)	Respiratory_dehydrogenases_1	Glycerol_fermenation_to_1,3-propanediol	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycerol kinase (EC 2.7.1.30)	Dihydroxyacetone_kinases	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	MLST	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycerol uptake facilitator protein	Dihydroxyacetone_kinases	Glycerol_fermenation_to_1,3-propanediol	Osmoregulation	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycerol uptake operon antiterminator regulatory protein	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	CBSS-176299.4.peg.1996	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32)	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Glycine betaine ABC transport system, permease/glycine betaine-binding protein OpuABC	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Glycine betaine ABC transport system permease protein	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Glycine betaine ABC transport system, permease protein OpuAB	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline- binding/permease protein	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Glycine betaine transporter OpuD	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Glycine cleavage system H protein	Glycine_cleavage_system	Photorespiration_(oxidative_C2_cycle)	Glycine_and_Serine_Utilization
Glycine cleavage system transcriptional activator	Orphan_regulatory_proteins
Glycine cleavage system transcriptional activator GcvA	Orphan_regulatory_proteins	Glycine_cleavage_system
Glycine cleavage system transcriptional antiactivator GcvR	Orphan_regulatory_proteins	Glycine_cleavage_system
Glycine/D-amino acid oxidase (deaminating) in putrescine utilization cluster	Putrescine_utilization_pathways
Glycine decarboxylase L-protein 1 (EC 1.8.1.4), mitochondrial	Photorespiration_(oxidative_C2_cycle)
Glycine decarboxylase L-protein 2 (EC 1.8.1.4), mitochondrial	Photorespiration_(oxidative_C2_cycle)
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	Glycine_cleavage_system	Photorespiration_(oxidative_C2_cycle)	Glycine_and_Serine_Utilization
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	Lipoic_acid_metabolism	Glycine_cleavage_system	Photorespiration_(oxidative_C2_cycle)	Glycine_and_Serine_Utilization
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	Lipoic_acid_metabolism	Glycine_cleavage_system	Photorespiration_(oxidative_C2_cycle)	Glycine_and_Serine_Utilization
Glycine N-methyltransferase (EC 2.1.1.20)	Betaine_biosynthesis_from_glycine
Glycine oxidase ThiO (EC 1.4.3.19)	Thiamin_biosynthesis
Glycine reductase component B alpha subunit (EC 1.21.4.2)	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Glycine_reductase,_sarcosine_reductase_and_betaine_reductase
Glycine reductase component B beta subunit (EC 1.21.4.2)	Glycine_reductase,_sarcosine_reductase_and_betaine_reductase
Glycine reductase component B gamma subunit (EC 1.21.4.2)	Glycine_reductase,_sarcosine_reductase_and_betaine_reductase
Glycine/sarcosine/betaine reductase component C chain 1	Glycine_reductase,_sarcosine_reductase_and_betaine_reductase
Glycine/sarcosine/betaine reductase component C chain 2	Glycine_reductase,_sarcosine_reductase_and_betaine_reductase
Glycine/sarcosine/betaine reductase protein A	Glycine_reductase,_sarcosine_reductase_and_betaine_reductase
Glycogen biosynthesis protein GlgD, glucose-1-phosphate adenylyltransferase family	Glycogen_metabolism
Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	Glycogen_metabolism
Glycogen debranching enzyme (EC 3.2.1.-)	Glycogen_metabolism	Trehalose_Biosynthesis
Glycogen phosphorylase (EC 2.4.1.1)	Maltose_and_Maltodextrin_Utilization	Glycogen_metabolism
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	Glycogen_metabolism
Glycogen synthase (EC 2.4.1.21)	Sucrose_Metabolism
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE	Glycolate,_glyoxylate_interconversions	Photorespiration_(oxidative_C2_cycle)
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF	Glycolate,_glyoxylate_interconversions	Photorespiration_(oxidative_C2_cycle)
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD	Glycolate,_glyoxylate_interconversions	Photorespiration_(oxidative_C2_cycle)
Glycolate oxidase (EC 1.1.3.15)	Glycolate,_glyoxylate_interconversions	Photorespiration_(oxidative_C2_cycle)
Glycolate oxidase (EC 1.1.3.15), peroxisomal	Photorespiration_(oxidative_C2_cycle)
Glycolate permease	Glycolate,_glyoxylate_interconversions	Photorespiration_(oxidative_C2_cycle)
Glycolate utilization operon transcriptional activator GlcC	Glycolate,_glyoxylate_interconversions
Glycosyltransferase	CBSS-258594.1.peg.3339
Glycosyl transferase CpsG	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Streptococcus_agalactiae_virulome
Glycosyltransferase (EC 2.4.1.-) in large core OS assembly cluster	Core_Oligosaccharide_Glycosylation_in_Pseudomonas
Glycosyltransferase (EC 2.4.1.-) SypH	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Glycosyltransferase (EC 2.4.1.-) SypI	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Glycosyltransferase (EC 2.4.1.-) SypJ	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Glycosyl transferase, group 1	CBSS-376686.6.peg.291	CBSS-258594.1.peg.3339
Glycosyl transferase, group 1 family, anthrose biosynthesis	Anthrose_Biosynthesis
Glycosyl transferase, group 1 family protein	Exopolysaccharide_Biosynthesis
Glycosyl transferase, group 1 family protein (EC 2.4.1.-)	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Glycosyl transferase ,group 2 family, anthrose biosynthesis	Anthrose_Biosynthesis
Glycosyl transferase, group 2 family protein	Exopolysaccharide_Biosynthesis	CBSS-218491.3.peg.427
Glycosyl transferase in large core OS assembly cluster	Core_Oligosaccharide_Glycosylation_in_Pseudomonas
Glycosyl transferase involved in teichoic acid biosynthesis	Teichoic_and_lipoteichoic_acids_biosynthesis
Glycosyltransferase IroB	Salmochelin-mediated_Iron_Acquisition
Glycosyltransferase MshA involved in mycothiol biosynthesis (EC 2.4.1.-)	Glutathione_analogs:_mycothiol
Glycosyltransferase PglI (EC 2.4.1.-)	CBSS-83332.1.peg.1531	N-linked_Glycosylation_in_Bacteria
Glycosyltransferase SypN	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Glycosyltransferase SypP	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Glycosyltransferase SypQ	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Glycosyl transferase WecB/TagA/CpsF	CBSS-237727.3.peg.501
Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	tRNA_aminoacylation
Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	tRNA_aminoacylation
Glycyl-tRNA synthetase (EC 6.1.1.14)	tRNA_aminoacylation
Glycyl-tRNA synthetase (EC 6.1.1.14), mitochondrial	tRNA_aminoacylation,_mitochondrial
Glyoxylate carboligase (EC 4.1.1.47)	CBSS-502800.3.peg.2785	Allantoin_degradation	Allantoin_Utilization	Glycerate_metabolism	Photorespiration_(oxidative_C2_cycle)
Glyoxylate reductase (EC 1.1.1.26)	Glycolate,_glyoxylate_interconversions
Glyoxylate reductase (EC 1.1.1.79)	Glycolate,_glyoxylate_interconversions
GMP reductase	Purine_conversions
GMP reductase (EC 1.7.1.7)	Purine_conversions
GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	Staphylococcal_pathogenicity_islands_SaPI	Purine_conversions
Group 2 RNA polymerase sigma factor	Cyanobacterial_Circadian_Clock
Growth-arrest-specific protein 8	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
GTPase and tRNA-U34 5-formylation enzyme TrmE	tRNA_modification_yeast_mitochondrial	tRNA_modification_Bacteria	Universal_GTPases	mnm5U34_biosynthesis_bacteria	CBSS-354.1.peg.1756
GTPase Nop2p which associates with pre-60S ribosomal subunits in the nucleolus and is required for their export and maturation	Universal_GTPases
GTPase Nug1p, which associates with pre-60S ribosomal subunits in the nucleolus and is required for their export from the nucleus	Universal_GTPases
GTP-binding and nucleic acid-binding protein YchF	Universal_GTPases
GTP-binding protein	CBSS-235.1.peg.567
GTP-binding protein EngA	CBSS-290633.1.peg.1906	Universal_GTPases
GTP-binding protein EngB	Universal_GTPases
GTP-binding protein Era	Bacterial_Cell_Division	tRNA_modification_Archaea	Universal_GTPases	CBSS-176299.4.peg.1292
GTP-binding protein HflX	Universal_GTPases	Hfl_operon
GTP-binding protein related to HflX	Hfl_operon
GTP-binding protein TypA/BipA	Universal_GTPases
GTP-binding protein YqeH, possibly involved in replication initiation	CBSS-1313.3.peg.391	Universal_GTPases
GTP cyclohydrolase I (EC 3.5.4.16) type 1	Pterin_metabolism_3	Zinc_regulated_enzymes	Pterin_metabolism	tRNA_modification_Bacteria	Pterin_biosynthesis	Folate_Biosynthesis	Methanopterin_biosynthesis2	Queuosine-Archaeosine_Biosynthesis	tRNA_modification_Archaea_Henri
GTP cyclohydrolase I (EC 3.5.4.16) type 2	Pterin_metabolism_3	Zinc_regulated_enzymes	Pterin_metabolism	Folate_Biosynthesis	Methanopterin_biosynthesis2	Queuosine-Archaeosine_Biosynthesis	tRNA_modification_Archaea_Henri
GTP cyclohydrolase II (EC 3.5.4.25)	Riboflavin,_FMN_and_FAD_metabolism	YgfZ
GTP cyclohydrolase III (EC 3.5.4.29)	Methanopterin_biosynthesis2	Riboflavin,_FMN_and_FAD_metabolism
GTP pyrophosphokinase	CBSS-222523.1.peg.1311
GTP pyrophosphokinase (EC 2.7.6.5)	CBSS-222523.1.peg.1311
GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	Stringent_Response,_(p)ppGpp_metabolism	CBSS-176299.4.peg.1292
GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	Stringent_Response,_(p)ppGpp_metabolism	CBSS-176299.4.peg.1292
GTP-sensing transcriptional pleiotropic repressor codY	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase
G:T/U mismatch-specific uracil/thymine DNA-glycosylase	DNA_repair,_bacterial
Guanine deaminase (EC 3.5.4.3)	Purine_Utilization	Purine_conversions	CBSS-266117.6.peg.2476
Guanine-hypoxanthine permease	Purine_Utilization
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	Stringent_Response,_(p)ppGpp_metabolism	CBSS-176299.4.peg.1292
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (EC 3.6.1.40)	Stringent_Response,_(p)ppGpp_metabolism	Phosphate_metabolism
Guanylate kinase (EC 2.7.4.8)	Purine_conversions	CBSS-323097.3.peg.2594	MLST
H-2 class II histocompatibility antigen, gamma chain	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Haemin uptake system ATP-binding protein	Hemin_transport_system	Campylobacter_Iron_Metabolism
Haemin uptake system outer membrane receptor	Hemin_transport_system	Ton_and_Tol_transport_systems	Campylobacter_Iron_Metabolism
Haemin uptake system periplasmic haemin-binding protein	Hemin_transport_system	Campylobacter_Iron_Metabolism
Haemin uptake system permease protein	Hemin_transport_system	Campylobacter_Iron_Metabolism
HAM1-like protein	CBSS-630.2.peg.3360
HBS1 protein	Translation_elongation_factors_eukaryotic_and_archaeal
Hca operon (3-phenylpropionic acid catabolism) transcriptional activator HcaR	Cinnamic_Acid_Degradation
HCOMODA decarboxylase	p-cymene_degradation
Hcp transcriptional regulator HcpR (Crp/Fnr family)	Nitrosative_stress
Heat-inducible transcription repressor HrcA	Heme_and_Siroheme_Biosynthesis	Heat_shock_dnaK_gene_cluster_extended
Heat shock protein 15	CBSS-281309.1.peg.50
Heat shock protein 60 family chaperone GroEL	Staphylococcal_pathogenicity_islands_SaPI	GroEL_GroES	CBSS-246196.1.peg.1974
Heat shock protein 60 family co-chaperone GroES	GroEL_GroES
Heat shock protein GrpE	Heat_shock_dnaK_gene_cluster_extended	Protein_chaperones
Heavy metal resistance transcriptional regulator HmrR	Cobalt-zinc-cadmium_resistance
Heavy metal RND efflux outer membrane protein, CzcC family	Cobalt-zinc-cadmium_resistance
Heavy metal sensor histidine kinase	Cobalt-zinc-cadmium_resistance	Copper_homeostasis
Helicase IV (EC 3.6.1.-)	CBSS-83333.1.peg.946
Helicase loader DnaI	DNA-replication
Helicase PriA essential for oriC/DnaA-independent DNA replication	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA-replication
Heme ABC transporter, ATPase component HmuV	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme ABC transporter, permease protein HmuU	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme ABC transporter (Streptococcus), ATP-binding protein	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme ABC transporter (Streptococcus), heme and hemoglobin-binding protein SiaA/HtsA	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme ABC transporter (Streptococcus), permease protein	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme ABC type transporter HtsABC, heme-binding protein	Flavohaemoglobin	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme ABC type transporter HtsABC, permease protein HtsB	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme ABC type transporter HtsABC, permease protein HtsC	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA	Biogenesis_of_cytochrome_c_oxidases
Heme bearing subunit I of the terminal oxidase (DoxB)	Terminal_cytochrome_C_oxidases
Heme-binding SCHIC domain protein, putative oxygen sensor	Oxygen_and_light_sensor_PpaA-PpsR
Heme biosynthesis protein related to NirD	Heme_biosynthesis_orphans
Heme biosynthesis protein related to NirD and NirG	Heme_biosynthesis_orphans
Heme biosynthesis protein related to NirG	Heme_biosynthesis_orphans
Heme biosynthesis protein related to NirH	Heme_biosynthesis_orphans
Heme biosynthesis protein related to NirL	Heme_biosynthesis_orphans
Heme biosynthesis protein related to NirL and NirH	Heme_biosynthesis_orphans
Heme d1 biosynthesis protein NirD	Dissimilatory_nitrite_reductase	Heme_biosynthesis_orphans
Heme d1 biosynthesis protein NirF	Dissimilatory_nitrite_reductase
Heme d1 biosynthesis protein NirG	Dissimilatory_nitrite_reductase	Heme_biosynthesis_orphans
Heme d1 biosynthesis protein NirH	Dissimilatory_nitrite_reductase	Heme_biosynthesis_orphans
Heme d1 biosynthesis protein NirJ	Dissimilatory_nitrite_reductase	Heme_biosynthesis_orphans
Heme d1 biosynthesis protein NirL	Dissimilatory_nitrite_reductase	Heme_biosynthesis_orphans
Heme-degrading cytoplasmic oxygenase IsdG	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme-degrading cytoplasmic oxygenase IsdI	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme efflux system ATPase HrtA	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme efflux system permease HrtB	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB	Flavohaemoglobin	CBSS-316057.3.peg.563	CBSS-196164.1.peg.1690	Biogenesis_of_cytochrome_c_oxidases
Heme oxygenase (EC 1.14.99.3)	Bilin_Biosynthesis	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Oxygen_and_light_sensor_PpaA-PpsR
Heme oxygenase HemO, associated with heme uptake	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemin_transport_system	Oxidative_stress
Heme-regulated cyclic AMP phosphodiesterase (EC 3.1.4.-)	cAMP_signaling_in_bacteria	Putative_hemin_transporter
Hemerythrin-like iron-binding protein	Campylobacter_Iron_Metabolism
Heme transporter analogous to IsdDEF, ATP-binding protein	Flavohaemoglobin	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme transporter IsdDEF, lipoprotein IsdE	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme transporter IsdDEF, membrane component IsdD	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Heme transporter IsdDEF, permease component IsdF	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
heme uptake regulator	Hemin_transport_system
heme uptake transmembrane sensor	Hemin_transport_system
hemimethylated DNA binding protein YccV	CBSS-83333.1.peg.946
Hemin ABC transporter, permease protein	Hemin_transport_system	Putative_hemin_transporter	Iron_acquisition_in_Vibrio
Hemin receptor protein HemR	Hemin_transport_system
Hemin transport protein HmuS	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemin_transport_system
Hemin uptake protein	Hemin_transport_system
Hemin uptake protein HemP	Hemin_transport_system
Hemoglobin-dependent two component system response regulator HrrA	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Hemoglobin-dependent two component system, sensory histidine kinase HrrS	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Hemoglobin, heme-dependent two component system response regulator ChrA	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Hemoglobin, heme-dependent two component system sensory histidine kinase ChrS	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Hemoglobin-like protein HbO	Bacterial_hemoglobins
Hemolysin-related protein RbmC	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Hemolysin-related protein Vcp	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Hemophore HasA	Protein_secretion_by_ABC-type_exporters	Ton_and_Tol_transport_systems
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Heme_and_Siroheme_Biosynthesis	Experimental_tye	CBSS-196164.1.peg.461
Heparinase II/III-like	CBSS-314225.3.peg.515
Heparin cofactor II, protease inhibitor I04.019	Coagulation_cascade
Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	Polyprenyl_Diphosphate_Biosynthesis	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)	Polyprenyl_Diphosphate_Biosynthesis	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Heptosyltransferase family protein, lipopolysaccharide core biosynthesis	LOS_core_oligosaccharide_biosynthesis
Heterocyst differentiation protein HetC	Heterocyst_formation_in_cyanobacteria
Heterocyst differentiation protein HetP	Heterocyst_formation_in_cyanobacteria
Heterocyst formation inhibiting signaling peptide PatS	Heterocyst_formation_in_cyanobacteria
Heterodisulfide reductase, cytochrome reductase subunit	Anaerobic_respiratory_reductases
heterodisulfide reductase, iron-sulfur binding subunit, putative	Anaerobic_respiratory_reductases
Heterodisulfide reductase, subunit A	Anaerobic_respiratory_reductases
heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta	Anaerobic_respiratory_reductases	Hydrogenases
heterodisulfide reductase, subunit E, putative	Anaerobic_respiratory_reductases
Heteropolysaccharide repeat unit export protein	Rhamnose_containing_glycans
Hexaprenyl pyrophosphate synthetase	Archaeal_lipids
Hexokinase D (EC 2.7.1.1)	Sucrose_Metabolism
Hexokinase (EC 2.7.1.1)	Glycolysis_and_Gluconeogenesis	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Hexose phosphate transport protein UhpT	Hexose_Phosphate_Uptake_System
Hexose phosphate uptake regulatory protein UhpC	Hexose_Phosphate_Uptake_System
Hexuronate transporter	D-Galacturonate_Utilization	Alginate_metabolism	D-Galacturonate_and_D-Glucuronate_Utilization
Hexuronate utilization operon transcriptional repressor ExuR	D-Galacturonate_Utilization	D-Galacturonate_and_D-Glucuronate_Utilization
HflC protein	Hfl_operon
HflK protein	Hfl_operon
HigA protein (antitoxin to HigB)	Toxin-antitoxin_systems_(other_than_RelBE_and_MazEF)
HigB toxin protein	Toxin-antitoxin_systems_(other_than_RelBE_and_MazEF)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)
High-affinity choline uptake protein BetT	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
High-affinity gluconate transporter GntT	D-gluconate_and_ketogluconates_metabolism
High-affinity leucine-specific transport system, periplasmic binding protein livK (TC 3.A.1.4.1)	ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)
High-affnity carbon uptake protein Hat/HatR	CO2_uptake,_carboxysome	Carboxysome
HipA protein	Persister_Cells
HipB protein	Persister_Cells
His repressor	CBSS-393121.3.peg.1913
Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)	Arginine_and_Ornithine_Degradation
Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1)	Arginine_and_Ornithine_Degradation
Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)	Arginine_and_Ornithine_Degradation
Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1)	Arginine_and_Ornithine_Degradation
Histidine ammonia-lyase (EC 4.3.1.3)	Histidine_Degradation
Histidine kinase of the competence regulon ComD	Competence_in_Streptococci
Histidine transport protein (permease)	Histidine_Degradation
Histidine triad (HIT) protein	CBSS-176299.4.peg.1996
Histidine utilization repressor	Histidine_Degradation
Histidinol dehydrogenase (EC 1.1.1.23)	Histidine_Biosynthesis
Histidinol-phosphatase [alternative form] (EC 3.1.3.15)	Histidine_Biosynthesis
Histidinol-phosphatase (EC 3.1.3.15)	Histidine_Biosynthesis
Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Aminotransferases:Aromatic_Pathway_and_More,_A_work_in_progress	Homogentisate_pathway_of_aromatic_compound_degradation	Histidine_Biosynthesis
Histidyl-tRNA synthetase (EC 6.1.1.21)	Stringent_Response,_(p)ppGpp_metabolism	tRNA_aminoacylation	Histidine_Biosynthesis
Histidyl-tRNA synthetase (EC 6.1.1.21), mitochondrial	tRNA_aminoacylation,_mitochondrial
histone acetyltransferase, ELP3 family	tRNA_modification_yeast_cytoplasmic	tRNA_modification_Archaea	mcm5s2U_biosynthesis_in_tRNA
Histone acetyltransferase HPA2 and related acetyltransferases	CBSS-216591.1.peg.168
Hmc operon transcriptional regulator Rrf2	Rrf2_family_transcriptional_regulators
HmrA protein involved in methicillin resistance	Methicillin_resistance_in_Staphylococci
HmrB protein involved in methicillin resistance	Methicillin_resistance_in_Staphylococci
Holin associated hypothetical protein	Murein_hydrolase_regulation_and_cell_death
Holin associated membrane protein 1	Murein_hydrolase_regulation_and_cell_death
Holin associated membrane protein 2	Murein_hydrolase_regulation_and_cell_death
Holin [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Holin-like protein 1	Murein_hydrolase_regulation_and_cell_death
Holin-like protein 2	Murein_hydrolase_regulation_and_cell_death
Holin-like protein CidA	Murein_hydrolase_regulation_and_cell_death
Holin [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Holliday junction DNA helicase RuvA	RuvABC_plus_a_hypothetical	DNA-replication
Holliday junction DNA helicase RuvB	RuvABC_plus_a_hypothetical	DNA-replication
Holo-[acyl-carrier protein] synthase, alternative (EC 2.7.8.7)	Fatty_Acid_Biosynthesis_FASII
Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	Fatty_Acid_Biosynthesis_FASII	CBSS-176299.4.peg.1292
Homoaconitase large subunit (EC 4.2.1.36)	Lysine_biosynthesis_AAA_pathway_2
Homoaconitase small subunit (EC 4.2.1.36)	Lysine_biosynthesis_AAA_pathway_2
Homocitrate synthase (EC 2.3.3.14)	Lysine_biosynthesis_AAA_pathway_2
Homocysteine S-methyltransferase (EC 2.1.1.10)	Methionine_Biosynthesis
HOMODA hydrolase (CmtE) (EC 3.7.1.-)	p-cymene_degradation
Homogentisate 1,2-dioxygenase (EC 1.13.11.5)	Pterin_metabolism_3	Pterin_carbinolamine_dehydratase	Homogentisate_pathway_of_aromatic_compound_degradation
Homogentisate prenyltransferase	Plastoquinone_Biosynthesis	Tocopherol_Biosynthesis
Homoisocitrate dehydrogenase (EC 1.1.1.87)	Lysine_biosynthesis_AAA_pathway_2
Homolog of E. coli HemY protein	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Homoprotocatechuate degradative operon repressor	4-Hydroxyphenylacetic_acid_catabolic_pathway
Homoserine dehydrogenase (EC 1.1.1.3)	Threonine_and_Homoserine_Biosynthesis	Methionine_Biosynthesis
Homoserine kinase (EC 2.7.1.39)	CBSS-269482.1.peg.1294	Threonine_and_Homoserine_Biosynthesis	Methionine_Biosynthesis
Homoserine lactone synthase YpeI	Quorum_sensing_in_Yersinia
Homoserine O-acetyltransferase (EC 2.3.1.31)	Methionine_Biosynthesis
Homoserine O-succinyltransferase (EC 2.3.1.46)	Methionine_Biosynthesis
HoxN/HupN/NixA family cobalt transporter	Transport_of_Nickel_and_Cobalt	Coenzyme_B12_biosynthesis
HoxN/HupN/NixA family nickel/cobalt transporter	Transport_of_Nickel_and_Cobalt
Hpa2 protein	CBSS-350701.3.peg.3277
HpaA protein	CBSS-243265.1.peg.3592
HpaP protein	CBSS-243265.1.peg.3592
HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	HPr_catabolite_repression_system	Mannitol_Utilization
HrcQ protein	CBSS-243265.1.peg.3592
HrpB1 protein	CBSS-243265.1.peg.3592
HrpB2 protein	CBSS-243265.1.peg.3592
HrpB4 protein	CBSS-243265.1.peg.3592
HrpD5 protein	CBSS-243265.1.peg.3592
HrpD6 protein	CBSS-243265.1.peg.3592
HrpF protein	CBSS-243265.1.peg.3592
Hsp20 family protein possibly involved in photorespiration	Photorespiration_(oxidative_C2_cycle)
HspR, transcriptional repressor of DnaK operon	Heat_shock_dnaK_gene_cluster_extended	Protein_chaperones
HTH domain protein SA1665, binds to mecA promoter region	Methicillin_resistance_in_Staphylococci
HTH-type transcriptional regulator BetI	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
HTH-type transcriptional regulator IlvY	Alanine_biosynthesis
HTH-type transcriptional regulator PtxR	2-Ketogluconate_Utilization	Paerucumarin_Biosynthesis
HtrA protease/chaperone protein	Periplasmic_Stress_Response	Lipopolysaccharide_assembly
HupE-UreJ family cobalt transporter	Transport_of_Nickel_and_Cobalt	Coenzyme_B12_biosynthesis
HupE-UreJ family metal transporter	Urea_decomposition	Transport_of_Nickel_and_Cobalt
Hut operon positive regulatory protein	Histidine_Degradation
Hyaluronan mediated motility receptor	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Hyaluronan synthase 2 (EC 2.4.1.212)	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Hyaluronan synthase 3 (EC 2.4.1.212)	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Hyaluronan synthase (EC 2.4.1.212)	Streptococcal_Hyaluronic_Acid_Capsule	Streptococcus_pyogenes_Virulome
Hyaluronate lyase precursor (EC 4.2.2.1)	Streptococcus_pyogenes_Virulome
Hyaluronoglucosaminidase (EC 3.2.1.35)	Fructooligosaccharides(FOS)_and_Raffinose_Utilization
Hybrid sensory histidine kinase in two-component regulatory system with EvgA	Orphan_regulatory_proteins
Hydantoinase	Hydantoin_metabolism
Hydantoin permease	Hydantoin_metabolism
hydantoin racemase	Hydantoin_metabolism
Hydantoin racemase (EC 5.1.99.-)	Hydantoin_metabolism
Hydantoin utilization protein A	Hydantoin_metabolism
Hydrogenase-4 component A (EC 1.-.-.-)	Formate_hydrogenase
Hydrogenase-4 component B (EC 1.-.-.-)	Formate_hydrogenase
Hydrogenase-4 component C (EC 1.-.-.-)	Formate_hydrogenase
Hydrogenase-4 component D (EC 1.-.-.-)	Formate_hydrogenase
Hydrogenase-4 component E (EC 1.-.-.-)	Formate_hydrogenase
Hydrogenase-4 component F (EC 1.-.-.-)	Formate_hydrogenase
Hydrogenase-4 component G (EC 1.-.-.-)	Formate_hydrogenase
Hydrogenase-4 component H (EC 1.-.-.-)	Formate_hydrogenase
Hydrogenase-4 component I (EC 1.-.-.-)	Formate_hydrogenase
Hydrogenase-4 transcriptional activator	Formate_hydrogenase
hydrogenase (cytochrome-c3 hydrogenase beta chain)	Hydrogenases
hydrogenase, group 4, HycE subunit, putative	Formate_hydrogenase
hydrogenase, group 4, HycG subunit, putative	Formate_hydrogenase
hydrogenase, HycC subunit, putative	Formate_hydrogenase
Hydrogenase maturation factor hoxL	Membrane-bound_Ni,_Fe-hydrogenase
Hydrogenase maturation factor hoxO	Membrane-bound_Ni,_Fe-hydrogenase
Hydrogenase maturation factor hoxQ	Membrane-bound_Ni,_Fe-hydrogenase
Hydrogenase maturation factor hoxR	Membrane-bound_Ni,_Fe-hydrogenase
Hydrogenase maturation factor hoxV	Membrane-bound_Ni,_Fe-hydrogenase
Hydrogenase maturation protease (EC 3.4.24.-)	Hydrogenases	Membrane-bound_Ni,_Fe-hydrogenase
hydrogenase, methyl-violgen-reducing type, delta subunit	Hydrogenases
hydrogenase, (NiFe)/(NiFeSe) small subunit family	Hydrogenases
hydrogenase, subunit gamma related protein	Hydrogenases
hydrogenase/sulfur reductase, alpha subunit	Hydrogenases
hydrogenase/sulfur reductase, beta subunit	Hydrogenases
hydrogenase/sulfur reductase, delta subunit	Hydrogenases
hydrogenase/sulfur reductase, gamma subunit	Hydrogenases
Hydrogen peroxide-inducible genes activator	DNA-binding_regulatory_proteins,_strays	Thioredoxin-disulfide_reductase	Oxidative_stress
Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase	cAMP_signaling_in_bacteria	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Hydrolase (HAD superfamily)	CBSS-83332.1.peg.3803
Hydrolase (HAD superfamily) in cluster with DUF1447	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Queuosine-Archaeosine_Biosynthesis
Hydrolase (HAD superfamily), YqeK	NAD_and_NADP_cofactor_biosynthesis_global	CBSS-1313.3.peg.391
Hydrolase in cluster with beta-lactamase (HAD superfamily)	Beta-lactamase_cluster_in_Streptococcus
Hydrolase in polyol utilization gene cluster, haloacid dehalogenase-like family	Ribitol,_Xylitol,_Arabitol,_Mannitol_and_Sorbitol_utilization	Mannitol_Utilization
Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	Methylglyoxal_Metabolism	Cobalt-zinc-cadmium_resistance	CBSS-228410.1.peg.134	Glutathione:_Non-redox_reactions	CBSS-342610.3.peg.1536	Glutathione-regulated_potassium-efflux_system_and_associated_functions	CBSS-292415.3.peg.2341
Hydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-)	Hydroxyaromatic_decarboxylase_family
Hydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-)	Hydroxyaromatic_decarboxylase_family
Hydroxyaromatic non-oxidative decarboxylase protein D (EC 4.1.1.-)	Hydroxyaromatic_decarboxylase_family
hydroxybenzoate permease	Benzoate_transport_and_degradation_cluster
Hydroxybenzoyl-CoA reductase subunit	Benzoate_transport_and_degradation_cluster
hydroxycinnamate specific porine	Phenylpropanoid_compound_degradation
Hydroxyethylthiazole kinase (EC 2.7.1.50)	Thiamin_biosynthesis
Hydroxylamine reductase (EC 1.7.-.-)	Nitrosative_stress
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	Branched_chain_amino_acid_degradation_regulons	HMG_CoA_Synthesis	Leucine_Degradation_and_HMG-CoA_Metabolism
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)	Archaeal_lipids	Isoprenoid_Biosynthesis	Leucine_Degradation_and_HMG-CoA_Metabolism	Mevalonate_Branch_of_Isoprenoid_Biosynthesis
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10)	Ketoisovalerate_oxidoreductase	Archaeal_lipids	Isoprenoid_Biosynthesis	Leucine_Degradation_and_HMG-CoA_Metabolism	Mevalonate_Branch_of_Isoprenoid_Biosynthesis
Hydroxymethylpyrimidine ABC transporter, ATPase component	Thiamin_biosynthesis
Hydroxymethylpyrimidine ABC transporter, substrate-binding component	Thiamin_biosynthesis
Hydroxymethylpyrimidine ABC transporter, transmembrane component	Thiamin_biosynthesis
Hydroxymethylpyrimidine synthesis protein THI5	Thiamin_biosynthesis
Hydroxyneurosporene dehydrogenase (EC 1.-.-.-)	Carotenoids
Hydroxyneurosporene methyltransferase (EC 2.1.1.-)	Carotenoids
Hydroxyneurosporene synthase	Carotenoids	Proteorhodopsin
Hydroxypyruvate isomerase (EC 5.3.1.22)	CBSS-502800.3.peg.2785	Glycerate_metabolism
Hydroxypyruvate reductase (EC 1.1.1.81)	Glycolate,_glyoxylate_interconversions	Glycerate_metabolism	Photorespiration_(oxidative_C2_cycle)
Hydroxypyruvate reductase, putative (EC 1.1.1.81)	Serine-glyoxylate_cycle
Hydroxysteroid sulfotransferase SULT2B1a (EC 2.8.2.2)	Steroid_sulfates
Hypotehtical protein in Cytochrome oxidase biogenesis cluster	Biogenesis_of_cytochrome_c_oxidases
Hypothertical protein, coexpressed with pyoverdine biosynthesis regulon	Pyoverdine_biosynthesis_new
Hypothetical ATP-binding protein, containing DUF265 domain	tRNA_modification_Archaea	tRNA_modification_Archaea_Henri
Hypothetical bd-type Menaquinol oxidase subunit	Terminal_cytochrome_d_ubiquinol_oxidases
hypothetical cytochrome c oxidase polypeptide I	Terminal_cytochrome_C_oxidases
Hypothetical, distant similarity with heme-degrading oxygenase IsdG	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
hypothetical fig|282458.1.peg.572 homolog	Staphylococcus_aureus_hypothetical_repetitive_gene_loci
hypothetical fig|282458.1.peg.573 homolog	Staphylococcus_aureus_hypothetical_repetitive_gene_loci
hypothetical fig|282458.1.peg.578 homolog	Staphylococcus_aureus_hypothetical_repetitive_gene_loci
hypothetical fig|282458.1.peg.579 homolog	Staphylococcus_aureus_hypothetical_repetitive_gene_loci
hypothetical fig|282458.1.peg.581 homolog	Staphylococcus_aureus_hypothetical_repetitive_gene_loci
hypothetical fig|282458.1.peg.583 homolog	Staphylococcus_aureus_hypothetical_repetitive_gene_loci
hypothetical fig|418127.4.peg.560 homolog	Staphylococcus_aureus_hypothetical_repetitive_gene_loci
Hypothetical flavoprotein YqcA (clustered with tRNA pseudouridine synthase C)	Flavodoxin
Hypothetical glycoside hydrolase, family 43, similar to arabinosidase	L-Arabinose_utilization
Hypothetical hydrolase YgeZ (EC 3.-.-.-)	Putative_diaminopropionate_ammonia-lyase_cluster
Hypothetical iron-sulfur cluster binding protein YccM	trimethylamine_N-oxide_(TMAO)_reductase
Hypothetical lactonase in carbon monoxide dehydrogenase cluster	CO_Dehydrogenase
Hypothetical lysR-family transcriptional regulator YdhB	CBSS-326442.4.peg.1852
Hypothetical MbtH-like protein, PA2412 homolog	Pyoverdine_biosynthesis_new
Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Hypothetical mga-associated protein	Streptococcal_Mga_Regulon
Hypothetical MW0753 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical MW0754 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical NagD-like phosphatase	CBSS-393123.3.peg.2365	CBSS-176279.3.peg.298
Hypothetical nudix hydrolase YeaB	Nudix_proteins_(nucleoside_triphosphate_hydrolases)	CBSS-316057.3.peg.1294
Hypothetical Nudix-like regulator	NAD_regulation
hypothetical oxidoreductase related to N-acetylglucosamine utilization	Chitin_and_N-acetylglucosamine_utilization
Hypothetical oxidoreductase YdjG (EC 1.-.-.-)	Unknown_carbohydrate_utilization_(_cluster_Ydj_)
Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster	L-Arabinose_utilization
Hypothetical protein (associated with DNA helicase - Rad25 homolog)	DNA_Helicase_of_Unknown_Function
Hypothetical protein associated with short form of CcmH	Biogenesis_of_c-type_cytochromes
hypothetical protein BH3604	CBSS-393121.3.peg.2760	CBSS-280355.3.peg.2835
hypothetical protein clusted with conjugative transposons, BF0131	Conjugative_transposon,_Bacteroidales
Hypothetical protein colocalized with Enterobactin receptor VctA	Iron_acquisition_in_Vibrio
Hypothetical protein DUF194, DegV family	CBSS-370552.3.peg.1240
Hypothetical protein DUF454	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Hypothetical protein DUF901, similar to C-terminal domain of ribosome protection-type Tc-resistance proteins	Conserved_gene_cluster_possibly_involved_in_RNA_metabolism
Hypothetical protein FIG009695	CBSS-176280.1.peg.1561
Hypothetical protein FIG015671 in large core OS assembly cluster	Core_Oligosaccharide_Glycosylation_in_Pseudomonas
Hypothetical protein FIG016047	CBSS-196620.1.peg.2477
Hypothetical protein FIG016644	CBSS-196620.1.peg.2477
Hypothetical protein FtpB	Siderophore_pyochelin
Hypothetical protein, GBAA2540 homolog	CBSS-261594.1.peg.2640
Hypothetical protein GlcG in glycolate utilization operon	Glycolate,_glyoxylate_interconversions
Hypothetical protein in aerobactin uptake cluster	Iron_acquisition_in_Vibrio
Hypothetical protein in ApbE locus	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Hypothetical protein in Beta-1,3-glycosyltransferase cluster	CBSS-237727.3.peg.501
Hypothetical protein in cluster with dihydroxyacetone kinase in Rhizobia	Dihydroxyacetone_kinases
Hypothetical protein in cluster with penicillin-binding protein PBP1, Bacillus type	Control_of_cell_elongation_-_division_cycle_in_Bacilli
Hypothetical protein in cluster with penicillin-binding protein PBP1, Listerial type	Control_of_cell_elongation_-_division_cycle_in_Bacilli
Hypothetical protein in cluster with penicillin-binding protein PBP1, Staphylococcal type	Control_of_cell_elongation_-_division_cycle_in_Bacilli
Hypothetical protein in cluster with SinR and SinI	Bacillus_biofilm_matrix_protein_component_TasA_and_homologs
Hypothetical protein in Cyanoglobin locus	Bacterial_hemoglobins
Hypothetical protein in predicted poly-gamma-glutamate synthase operon	Poly-gamma-glutamate_biosynthesis
Hypothetical protein in pyoverdin gene cluster	Pyoverdine_biosynthesis_new
Hypothetical protein in pyoverdin gene cluster, PA2405 homolog	Pyoverdine_biosynthesis_new
Hypothetical protein in pyoverdin gene cluster, PA2406 homolog	Pyoverdine_biosynthesis_new
Hypothetical protein involved in heavy metal export	Cobalt-zinc-cadmium_resistance
Hypothetical protein i Rubrerythrin cluster	Rubrerythrin
Hypothetical protein, Lin0079 homolog [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Hypothetical protein, Lmo2276 homolog	Listeria_phi-A118-like_prophages
Hypothetical protein, Lmo2305 homolog [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Hypothetical protein, Lmo2306 homolog [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Hypothetical protein, Lmo2307 homolog [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Hypothetical protein, Lmo2313 homolog [Bacteriophage A118]	Listeria_phi-A118-like_prophages
hypothetical protein NAS141_09886	CBSS-176299.4.peg.1292
hypothetical protein PA3071	CBSS-345072.3.peg.1318
Hypothetical protein, phi-ETA orf16 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, phi-ETA orf17 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, phi-ETA orf24 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, phi-ETA orf33 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, phi-ETA orf42 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, phi-ETA orf55 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, phi-ETA orf58 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, phi-ETA orf63 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase	CBSS-257314.1.peg.488
Hypothetical protein probably associated with Carbamoyl-phosphate synthase	CBSS-306254.1.peg.1508
Hypothetical protein probably related to Formate dehydrogenase function	Formate_hydrogenase
Hypothetical protein, PV83 orf10 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PV83 orf12 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PV83 orf19 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PV83 orf 20 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PV83 orf22 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PV83 orf23 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PV83 orf3 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PV83 orf4 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein PvdX	Pyoverdine_biosynthesis_new
Hypothetical protein PvdY	Pyoverdine_biosynthesis_new
Hypothetical protein pVir0004	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0007	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0008	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0009	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0010	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0012	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0015	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0016	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0019/pVir0020	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0021	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0029, glutamine-rich	pVir_Plasmid_of_Campylobacter
Hypothetical protein pVir0042	pVir_Plasmid_of_Campylobacter
Hypothetical protein, PVL orf39 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PVL orf50 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PVL orf51 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, PVL orf52 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
hypothetical protein pYVe8081_p05	CBSS-243265.1.peg.3592
Hypothetical protein Q8DBD3_VIBVU	CBSS-342610.3.peg.1536
Hypothetical protein Q, similar to Chlorite dismutase	Experimental_tye
Hypothetical protein RbmB	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Hypothetical protein RbmE	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Hypothetical protein RbmF	Vibrio_Polysaccharide_(VPS)_Biosynthesis
hypothetical protein Rv3802c	CBSS-83332.1.peg.3803
hypothetical protein SA_21	SA:14-24
Hypothetical protein, SAB1734c homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAB1742c homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAV0849 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAV0852 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAV0860 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAV0876 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAV0877 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAV0878 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAV0880 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SAV0881 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein SAV1831	Experimental_tye
Hypothetical protein SAV1839	CBSS-176279.3.peg.1262
Hypothetical protein SAV1840	CBSS-176279.3.peg.1262
Hypothetical protein SAV1869	CBSS-176280.1.peg.1561
Hypothetical protein SAV1877	CBSS-176280.1.peg.1561
Hypothetical protein SAV1882	CBSS-176280.1.peg.1561	CBSS-176279.3.peg.1389
hypothetical protein SC6C5.04c	CBSS-266117.6.peg.2476
Hypothetical protein, similarity with fibrinogen-binding protein Efb	Adhesins_in_Staphylococcus
Hypothetical protein, similarity with von Willebrand factor-binding VWbp	Adhesins_in_Staphylococcus
hypothetical protein SKA53_09994	CBSS-89187.3.peg.2957
Hypothetical protein, Slr0957 homolog	Conserved_gene_cluster_possibly_involved_in_RNA_metabolism
Hypothetical protein, SLT orf81b homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Hypothetical protein, SLT orf99 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
hypothetical protein sometimes fused to ribosomal protein S6 glutaminyl transferase	Ribosome_biogenesis_bacterial
Hypothetical protein, Spy1939 homolog	Conserved_gene_cluster_possibly_involved_in_RNA_metabolism
Hypothetical protein, sulfurtransferase domain	CBSS-261594.1.peg.2640
Hypothetical protein TdcF in cluster with anaerobic degradation of L-threonine to propionate	Threonine_anaerobic_catabolism_gene_cluster
hypothetical protein that often co-occurs with aconitase	TCA_Cycle
hypothetical protein TM1757	CBSS-335541.4.peg.1350
Hypothetical protein VpsF	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Hypothetical protein VpsJ	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Hypothetical protein VpsP	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Hypothetical protein VpsQ	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Hypothetical protein YaeJ with similarity to translation release factor	Translation_factors_bacterial
Hypothetical protein YceD (clustered with ribosomal protein L32p)	CBSS-198215.1.peg.1051
Hypothetical protein, ydbS homolog	Experimental_tye
Hypothetical protein, ydbT homolog	Experimental_tye
Hypothetical protein YfkI	LMPTP_YfkJ_cluster
Hypothetical protein YfkK	LMPTP_YfkJ_cluster	CBSS-176280.1.peg.1561
Hypothetical protein yhhQ	tRNA_modification_Archaea_Henri
Hypothetical protein YrhD	Formate_hydrogenase
Hypothetical protein ywlG	LMPTP_YwlE_cluster
Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	Heme_and_Siroheme_Biosynthesis	Heat_shock_dnaK_gene_cluster_extended	Experimental_tye
Hypothetical, related to broad specificity phosphatases COG0406	Experimental_tye	CBSS-196164.1.peg.461
Hypothetical SAR0365 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAR0369 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAR0371 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAR0372 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAR0385 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0786 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0787 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0788 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0789 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0790 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0791 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0792 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0793 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0794 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0795 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0796 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0797 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0798 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0799 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV0801 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV2026 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical SAV2027 homolog in superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Hypothetical secreted sugar oxidoreductase, Gfo/Idh/MocA family, GalNAc-related	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Hypothetical, similarity to phosphoglycerate mutase	CBSS-196164.1.peg.461
Hypothetical, similar to sarcosine oxidase alpha subunit, 2Fe-2S domain	Proline,_4-hydroxyproline_uptake_and_utilization
Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Hypothetical succinate dehydrogenase membrane anhor protein	Succinate_dehydrogenase
Hypothetical sugar kinase in cluster with indigoidine synthase indA , PfkB family of kinases	CBSS-176299.3.peg.235
Hypothetical transmembrane protein CDS_ID OB1773	CBSS-393130.3.peg.129
Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase chain 5 homolog	CO2_uptake,_carboxysome	Respiratory_Complex_I
Hypothetical transmembrane protein ywlD	LMPTP_YwlE_cluster
Hypothetical zinc-type alcohol dehydrogenase-like protein YdjJ	Unknown_carbohydrate_utilization_(_cluster_Ydj_)
Hypothetical zinc-type alcohol dehydrogenase-like protein YphC	Unknown_sugar_utilization_(cluster_yphABCDEFG)
Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	Purine_conversions	CBSS-281309.1.peg.50
IcmF-related protein	Type_VI_secretion_systems
identified by similarity to GB:AAK22812.1	CBSS-216591.1.peg.168
IgaA: a membrane protein that prevents overactivation of the Rcs regulatory system	CBSS-584.1.peg.3382
IgG-binding protein SBI	Staphylococcus_Two-component_and_Pore-forming_Cytolysins
Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Histidine_Biosynthesis
Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Histidine_Biosynthesis
Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Histidine_Biosynthesis
Imidazolonepropionase (EC 3.5.2.7)	Histidine_Degradation
Immune inhibitor A metalloprotease	Bacillus_biofilm_matrix_protein_component_TasA_and_homologs
Immunity factor CibC	Fratricide_in_Streptococcus
Immunity factor ComM	Fratricide_in_Streptococcus
Immunogenic secreted protein	Streptococcal_Mga_Regulon
Immunoglobulin G-endopeptidase (IdeS)	Streptococcus_pyogenes_Virulome
IMP cyclohydrolase (EC 3.5.4.10)	De_Novo_Purine_Biosynthesis
IMP cyclohydrolase (EC 3.5.4.10) [alternate form]	De_Novo_Purine_Biosynthesis
IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	CBSS-314225.3.peg.515
IMP dehydrogenase related 1 (EC 1.1.1.205)	Purine_conversions
IMP dehydrogenase related 2 (EC 1.7.1.7)	Purine_conversions
Inactive homolog of metal-dependent proteases, putative molecular chaperone	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	YgjD_and_YeaZ	Ribosome_biogenesis_bacterial	YrdC-YciO	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Putative_hemin_transporter	YjeE
IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer fertility inhibition protein FinO	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer mating signal transduction protein TraM	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilin acetylase TraX	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilin protein TraA	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraB	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraC	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraE	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraF	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraH	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraK	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraL	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraU	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraV	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer pilus assembly protein TraW	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TraD	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TraG	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TraN	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TraP	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TraQ	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TraR	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbA	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbB	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbC	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbD	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbE	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbF	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbG	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbH	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbI	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer protein TrbJ	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer regulator TraJ	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer regulator TraY	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer surface exclusion protein TraS	Type_4_secretion_and_conjugative_transfer
IncF plasmid conjugative transfer surface exclusion protein TraT	Type_4_secretion_and_conjugative_transfer
IncI1 plasmid conjugative transfer ATPase PilQ	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer DNA primase	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer inner membrane protein PilR	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer lipoprotein PilN	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer NusG-type transcription antiterminator TraB	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer pilus-tip adhesin protein PilV	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer prepilin PilS	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein PilI	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein PilJ	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein PilK	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein PilL	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein PilM	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraA	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraC	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraD	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraE	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraF	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraG	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraH	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraI	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraJ, related to pilus biogenesis/retracton protein	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraK	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraL	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraM	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraN	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraO	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer protein TraP	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid conjugative transfer putative membrane protein PilT	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid pilus assembly protein PilO	Type_4_conjugative_transfer_system,_IncI1_type
IncI1 plasmid pilus assembly protein PilP	Type_4_conjugative_transfer_system,_IncI1_type
IncN plasmid KikA protein	Type_4_secretion_and_conjugative_transfer
IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog)	Type_4_secretion_and_conjugative_transfer
IncQ plasmid conjugative transfer DNA primase TraO (pTi TraA homolog)	Type_4_secretion_and_conjugative_transfer
IncQ plasmid conjugative transfer protein TraB	CBSS-335283.3.peg.454	Type_4_secretion_and_conjugative_transfer
IncQ plasmid conjugative transfer protein TraG	Type_4_secretion_and_conjugative_transfer
IncQ plasmid conjugative transfer protein TraP	Type_4_secretion_and_conjugative_transfer
IncQ plasmid conjugative transfer protein TraQ (RP4 TrbM homolog)	Type_4_secretion_and_conjugative_transfer
IncW plasmid conjugative protein TrwB (TraD homolog)	Type_4_secretion_and_conjugative_transfer
IncW plasmid conjugative relaxase protein TrwC (TraI homolog)	Type_4_secretion_and_conjugative_transfer
Indigoidine synthase A-like protein, uncharacterized enzyme involved in pigment biosynthesis	CBSS-176299.3.peg.235
Indole-3-acetate beta-glucosyltransferase	Auxin_biosynthesis
Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	Tryptophan_synthesis
Indole-3-pyruvate decarboxylase (EC 4.1.1.74)	Auxin_biosynthesis
Indole-acetamide hydrolase	Auxin_biosynthesis
Indoleacetamide hydrolase (EC 3.5.1.-)	Aromatic_amino_acid_degradation
Indoleamine 2,3-dioxygenase (EC 1.13.11.52)	NAD_and_NADP_cofactor_biosynthesis_global	Pseudomonas_quinolone_signal_PQS
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits	Aromatic_amino_acid_interconversions_with_aryl_acids
Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	Indole-pyruvate_oxidoreductase_complex	Aromatic_amino_acid_interconversions_with_aryl_acids
Indolepyruvate oxidoreductase subunit IorA-like (EC 1.2.7.8)	Aromatic_amino_acid_interconversions_with_aryl_acids
Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	Indole-pyruvate_oxidoreductase_complex	Aromatic_amino_acid_interconversions_with_aryl_acids
Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8)	Aromatic_amino_acid_interconversions_with_aryl_acids
Inducers of aerial mycelium formation biosynthesis protein BldG	2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone_and_other_bacterial_morphogens
Inducible Fructanase (EC 3.2.1.80), FruB	Fructose_and_Mannose_Inducible_PTS
Inhibitor of vertebrate lysozyme precursor	Lysozyme_inhibitors
Inner membrane ABC transporter permease protein YcjO	Maltose_and_Maltodextrin_Utilization
Inner membrane ABC transporter permease protein YcjP	Maltose_and_Maltodextrin_Utilization
Inner membrane component of tripartite multidrug resistance system	Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria
Inner membrane metabolite transport protein YhjE	Inner_membrane_protein_YhjD_and_conserved_cluster_involved_in_LPS_biosynthesis
Inner membrane protein CreD	Tolerance_to_colicin_E2
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10)	Type_4_secretion_and_conjugative_transfer
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3)	Type_4_secretion_and_conjugative_transfer
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8)	Type_4_secretion_and_conjugative_transfer	pVir_Plasmid_of_Campylobacter
Inner membrane protein of type IV secretion of T-DNA complex, TonB-like, VirB10	Plasmid-encoded_T-DNA_transfer
Inner membrane protein of type IV secretion of T-DNA complex, VirB3	Plasmid-encoded_T-DNA_transfer
Inner membrane protein of type IV secretion of T-DNA complex, VirB6	Plasmid-encoded_T-DNA_transfer
Inner membrane protein of type IV secretion of T-DNA complex, VirB8	Plasmid-encoded_T-DNA_transfer
Inner membrane protein YccF	CBSS-83333.1.peg.946
Inner membrane protein YeaI	Unknown_carbohydrate_utilization_(_cluster_Ydj_)
Inner membrane protein YghQ, probably involved in polysaccharide biosynthesis	Conserved_cluster_around_inner_membrane_protein_gene_yghQ,_probably_involved_in_polysaccharide_biosynthesis
Inner membrane protein YhaH	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein
Inner membrane protein YhaI	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein
Inner membrane protein YhjD	Inner_membrane_protein_YhjD_and_conserved_cluster_involved_in_LPS_biosynthesis
Inner membrane protein YphA	Unknown_sugar_utilization_(cluster_yphABCDEFG)
Inner membrane protein YqjE	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein
Inner membrane protein YqjF	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein
Inner membrane protein YqjK	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein
Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter	Lipopolysaccharide_assembly
Inner membrane transport protein YbaT	Uptake_of_selenate_and_selenite
Inner membrane transport protein YeiM, in cluster with pseudouridine metabolism operon	Pseudouridine_Metabolism
Inner membrane transport protein YfaV	Yfa_cluster
Inorganic pyrophospatase PpaX (EC 3.1.3.18)	Phosphate_metabolism
Inorganic pyrophosphatase (EC 3.6.1.1)	Phosphate_metabolism
Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	Purine_conversions
Inosine-guanosine kinase (EC 2.7.1.73)	Purine_conversions
Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	Purine_conversions	Queuosine-Archaeosine_Biosynthesis
Inosine/xanthosine triphosphatase (EC 3.6.1.-)	Housecleaning_nucleoside_triphosphate_pyrophosphatases
Inositol-1-monophosphatase (EC 3.1.3.25)	Flavohaemoglobin	Inositol_catabolism	Di-Inositol-Phosphate_biosynthesis
Inositol-1-phosphate synthase (EC 5.5.1.4)	Di-Inositol-Phosphate_biosynthesis
Inositol oxygenase (EC 1.13.99.1)	Inositol_catabolism
Inositol transport system ATP-binding protein	Inositol_catabolism
Inositol transport system permease protein	Inositol_catabolism
Inositol transport system sugar-binding protein	Inositol_catabolism
Inosose dehydratase (EC 4.2.1.44)	Inositol_catabolism
Inosose isomerase (EC 5.3.99.-)	Inositol_catabolism
Insertion element IS1 protein insA	Capsular_surface_virulence_antigen_loci
Insertion element IS1 protein insB	Capsular_surface_virulence_antigen_loci
Integral inner membrane protein of type IV secretion complex (VirB6)	Type_4_secretion_and_conjugative_transfer
Integral membrane protein CcmA involved in cell shape determination	CBSS-316273.3.peg.922
Integrase [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Integrase/recombinase clustered with segregation and condensation protein B	CBSS-203122.12.peg.188
Integrase regulator RinA [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Integrase regulator RinB [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Integrase [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Integrase, superantigen-encoding pathogenicity islands SaPI	Staphylococcal_pathogenicity_islands_SaPI
Integration host factor alpha subunit	DNA_structural_proteins,_bacterial
Integration host factor beta subunit	DNA_structural_proteins,_bacterial
Integron integrase	Integrons
Integron integrase IntI1	Integrons
Integron integrase IntI2	Integrons
Integron integrase IntI4	Integrons
Integron integrase IntIPac	Integrons
intein-containing	Inteins
Internalin A (LPXTG motif)	Listeria_surface_proteins:_Internalin-like_proteins
Internalin B (GW modules)	Listeria_surface_proteins:_Internalin-like_proteins
Internalin C	Listeria_surface_proteins:_Internalin-like_proteins
Internalin C2 (LPXTG motif)	Listeria_surface_proteins:_Internalin-like_proteins
Internalin D (LPXTG motif)	Listeria_surface_proteins:_Internalin-like_proteins
Internalin E (LPXTG motif)	Listeria_surface_proteins:_Internalin-like_proteins
Internalin G (LPXTG motif)	Listeria_surface_proteins:_Internalin-like_proteins
Internalin H (LPXTG motif)	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein Lin0295 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein Lin2537 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein Lmo0549 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein Lmo2027 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein Lmo2445 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein Lmo2470 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lin0290 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lin0372 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lin0661 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lin0739 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lin0740 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lin1204 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo0171 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo0327 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo0331 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo0333 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo0409 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo0514 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo0610 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo0732 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo0801 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo1136 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo1289 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo1290 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo2026 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo2396 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmo2821 homolog	Listeria_surface_proteins:_Internalin-like_proteins
Internalin-like protein (LPXTG motif) Lmof0365 homolog	Listeria_surface_proteins:_Internalin-like_proteins
internalin, putative	Listeria_surface_proteins:_Internalin-like_proteins
internalin, putative (LPXTG motif)	Listeria_surface_proteins:_Internalin-like_proteins
Intracellular PHB depolymerase (EC 3.1.1.-)	Polyhydroxybutyrate_metabolism
Intracellular septation protein IspA	Intracellular_septation_in_Enterobacteria
Intradiol ring-cleavage dioxygenase (EC 1.13.11.1)	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
Invasion protein IagB precursor	CBSS-243265.1.peg.3592
Invasion protein InvA	Salmonella_invasion_locus	CBSS-243265.1.peg.3592
Invasion protein InvE	Salmonella_invasion_locus
Invasion protein invH precursor	CBSS-243265.1.peg.3592
iron aquisition 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58,Irp5)	Siderophore_Yersiniabactin_Biosynthesis
iron aquisition outermembrane yersiniabactin receptor (FyuA,Psn,pesticin receptor)	Siderophore_Yersiniabactin_Biosynthesis
iron aquisition regulator (YbtA,AraC-like,required for transcription of FyuA/psn,Irp2)	Siderophore_Yersiniabactin_Biosynthesis
iron aquisition yersiniabactin synthesis enzyme (Irp1,polyketide synthetase)	Siderophore_Yersiniabactin_Biosynthesis
iron aquisition yersiniabactin synthesis enzyme (Irp2)	Siderophore_Yersiniabactin_Biosynthesis
iron aquisition yersiniabactin synthesis enzyme (Irp3)	Siderophore_Yersiniabactin_Biosynthesis
iron aquisition yersiniabactin synthesis enzyme (YbtT,resembles thioesterases)	Siderophore_Yersiniabactin_Biosynthesis
Iron-binding ferritin-like antioxidant protein	Oxidative_stress
Iron binding protein IscA for iron-sulfur cluster assembly	Flavohaemoglobin	Fe-S_cluster_assembly	tRNA_modification_Bacteria	YgfZ
Iron binding protein SufA for iron-sulfur cluster assembly	Fe-S_cluster_assembly
iron-chelator utilization protein	Ton_and_Tol_transport_systems
Iron compound ABC uptake transporter ATP-binding protein	Flavohaemoglobin	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Hemin_transport_system	Iron_acquisition_in_Streptococcus
Iron compound ABC uptake transporter ATP-binding protein PiaD	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Iron compound ABC uptake transporter ATP-binding protein PiuD	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Iron compound ABC uptake transporter permease protein	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Iron_acquisition_in_Streptococcus
Iron compound ABC uptake transporter permease protein PiaB	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Iron compound ABC uptake transporter permease protein PiaC	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Iron compound ABC uptake transporter permease protein PiuB	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Iron compound ABC uptake transporter permease protein PiuC	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Iron compound ABC uptake transporter substrate-binding protein	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Iron_acquisition_in_Streptococcus
Iron compound ABC uptake transporter substrate-binding protein PiaA	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Iron compound ABC uptake transporter substrate-binding protein PiuA	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Iron-dependent repressor IdeR/DtxR	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	Transport_of_Iron
Iron (II) and Manganese ABC transporter, ATP-binding component	ABC_transporter_Iron_(II)_and_Manganese
Iron (II) and Manganese ABC transporter, inner membrane component	ABC_transporter_Iron_(II)_and_Manganese
Iron (II) and Manganese ABC transporter, Inner membrane permease	ABC_transporter_Iron_(II)_and_Manganese
Iron (II) and Manganese ABC transporter, periplasmic-binding protein	ABC_transporter_Iron_(II)_and_Manganese
Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1)	Flavohaemoglobin	ABC_transporter_iron(III)_dicitrate_(TC_3.A.1.14.1)
Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1)	Flavohaemoglobin	ABC_transporter_iron(III)_dicitrate_(TC_3.A.1.14.1)	Vibrioferrin_synthesis
Iron(III) dicitrate transport system permease protein fecC (TC 3.A.1.14.1)	ABC_transporter_iron(III)_dicitrate_(TC_3.A.1.14.1)
Iron(III) dicitrate transport system permease protein fecD (TC 3.A.1.14.1)	Flavohaemoglobin	ABC_transporter_iron(III)_dicitrate_(TC_3.A.1.14.1)
Iron-regulated protein A precursor	Transport_of_Iron
Iron-regulated virulence regulatory protein irgB	Iron_acquisition_in_Vibrio
Iron-responsive regulator Irr	Transport_of_Iron	Oxidative_stress	Putative_hemin_transporter
Iron-responsive repressor RirA	Rrf2_family_transcriptional_regulators	Transport_of_Iron
Iron-sulfur cluster assembly ATPase protein SufC	Fe-S_cluster_assembly	CBSS-196164.1.peg.1690	tRNA_modification_Bacteria	YgfZ
Iron-sulfur cluster assembly protein SufB	Fe-S_cluster_assembly	CBSS-196164.1.peg.1690	tRNA_modification_Bacteria	Staphylococcal_phi-Mu50B-like_prophages
Iron-sulfur cluster assembly protein SufD	Fe-S_cluster_assembly	CBSS-196164.1.peg.1690	tRNA_modification_Bacteria
Iron-sulfur cluster assembly scaffold protein IscU	Flavohaemoglobin	Fe-S_cluster_assembly	tRNA_modification_Archaea	tRNA_modification_Bacteria	Wyeosine-MimG_Biosynthesis
Iron-sulfur cluster assembly scaffold protein NifU	Fe-S_cluster_assembly
Iron-sulfur cluster regulator IscR	Flavohaemoglobin	Fe-S_cluster_assembly	Rrf2_family_transcriptional_regulators
Iron-sulfur cluster regulator SufR	Fe-S_cluster_assembly	CBSS-196164.1.peg.1690
Iron-uptake factor PiuB	Transport_of_Iron
Iron-uptake factor PiuC	Transport_of_Iron
Isoaspartyl aminopeptidase	Protein_degradation
Isoaspartyl dipeptidase (EC 3.4.19.5)	Protein_degradation
isobutyryl-CoA dehydrogenase	Serine-glyoxylate_cycle
Isochorismatase (EC 3.3.2.1)	NAD_and_NADP_cofactor_biosynthesis_global	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
Isochorismatase (EC 3.3.2.1) of siderophore biosynthesis	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.	Iron_acquisition_in_Vibrio
Isochorismate pyruvate-lyase (EC 4.-.-.-)	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
Isochorismate pyruvate-lyase of siderophore biosynthesis	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.	Iron_acquisition_in_Vibrio
Isochorismate synthase (EC 5.4.4.2)	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
Isochorismate synthase (EC 5.4.4.2) of siderophore biosynthesis	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.	Iron_acquisition_in_Vibrio
Isocitrate dehydrogenase 3 subunit alpha, mitochondrial precursor (EC 1.1.1.41)	TCA_Cycle
Isocitrate dehydrogenase 3 subunit beta, mitochondrial precursor (EC 1.1.1.41)	TCA_Cycle
Isocitrate dehydrogenase 3 subunit gamma, mitochondrial precursor (EC 1.1.1.41)	TCA_Cycle
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)	TCA_Cycle
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	TCA_Cycle
Isocitrate dehydrogenase [NAD] subunit II, mitochondrial precursor (EC 1.1.1.41)	TCA_Cycle
Isocitrate dehydrogenase [NAD] subunit I, mitochondrial precursor (EC 1.1.1.41)	TCA_Cycle
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)	Glyoxylate_bypass
Isocitrate lyase (EC 4.1.3.1)	Glyoxylate_bypass	Glyoxylate_Synthesis	Serine-glyoxylate_cycle
Isoflavone reductase homolog P3 (EC 1.3.1.-)	Phytoalexin_biosynthesis	Apigenin_derivatives
isoflavone reductase, putative	Apigenin_derivatives
Isohexenylglutaconyl-CoA hydratase	Acyclic_terpenes_utilization
Isoleucyl-tRNA synthetase (EC 6.1.1.5)	Cell_Division_Cluster	tRNA_aminoacylation	CBSS-83332.1.peg.1531
Isoleucyl-tRNA synthetase (EC 6.1.1.5), mitochondrial	tRNA_aminoacylation,_mitochondrial
Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	polyprenyl_synthesis	Isoprenoid_Biosynthesis:_Interconversions	Archaeal_lipids	Isoprenoid_Biosynthesis
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)	Isoprenoid_Biosynthesis:_Interconversions	Archaeal_lipids	Isoprenoid_Biosynthesis
Isopentenyl phosphate kinase	Archaeal_lipids
Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)	CBSS-314267.3.peg.390	N-heterocyclic_aromatic_compound_degradation
Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)	CBSS-314267.3.peg.390	N-heterocyclic_aromatic_compound_degradation
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)	Branched_chain_amino_acid_degradation_regulons	HMG_CoA_Synthesis	Leucine_Degradation_and_HMG-CoA_Metabolism
ISPsy4, transposase	CBSS-203122.12.peg.188
ISPsy4, transposition helper protein	CBSS-203122.12.peg.188
Kappa-fimbriae chaperone protein	&#954;-Fimbriae
Kappa-fimbriae major subunit	&#954;-Fimbriae
Kappa-fimbriae probable subunit	&#954;-Fimbriae
Kappa-fimbriae regulatory protein	&#954;-Fimbriae
Kappa-fimbriae usher protein	&#954;-Fimbriae
KdpE	Potassium_homeostasis
Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)	Potassium_homeostasis
Kef-type transport system 2 (probable substrate potassium), subunit 1	Potassium_homeostasis
Kef-type transport system 2 (probable substrate potassium), subunit 2	Potassium_homeostasis
Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)	Proline,_4-hydroxyproline_uptake_and_utilization
Ketoisovalerate oxidoreductase subunit (EC 1.2.7.7)	Ketoisovalerate_oxidoreductase
Ketoisovalerate oxidoreductase subunit VorA (EC 1.2.7.7)	Ketoisovalerate_oxidoreductase
Ketoisovalerate oxidoreductase subunit VorB (EC 1.2.7.7)	Ketoisovalerate_oxidoreductase
Ketoisovalerate oxidoreductase subunit VorC (EC 1.2.7.7)	Ketoisovalerate_oxidoreductase
Ketoisovalerate oxidoreductase subunit VorD (EC 1.2.7.7)	Ketoisovalerate_oxidoreductase
Ketoisovalerate oxidoreductase subunit VorG (EC 1.2.7.7)	Ketoisovalerate_oxidoreductase
Ketol-acid reductoisomerase (EC 1.1.1.86)	Branched-Chain_Amino_Acid_Biosynthesis	Coenzyme_A_Biosynthesis
KH domain RNA binding protein YlqC	KH_domain_RNA_binding_protein_YlqC
Ku domain protein	Nonhomologous_End-Joining_in_Bacteria
Kup system potassium uptake protein	Potassium_homeostasis	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Kynureninase (EC 3.7.1.3)	NAD_and_NADP_cofactor_biosynthesis_global	Pseudomonas_quinolone_signal_PQS	Tryptophan_catabolism
Kynurenine 3-monooxygenase (EC 1.14.13.9)	NAD_and_NADP_cofactor_biosynthesis_global	Tryptophan_catabolism
Kynurenine formamidase, bacterial (EC 3.5.1.9)	NAD_and_NADP_cofactor_biosynthesis_global	Aromatic_amino_acid_degradation	Benzoate_degradation	Pseudomonas_quinolone_signal_PQS	Tryptophan_catabolism
Kynurenine formamidase (EC 3.5.1.9)	NAD_and_NADP_cofactor_biosynthesis_global	Tryptophan_catabolism
Kynurenine formamidase, yeast-type BNA7 (EC 3.5.1.9)	NAD_and_NADP_cofactor_biosynthesis_global
L-2,4-diaminobutyric acid acetyltransferase (EC 2.3.1.-)	Hyperosmotic_ectoine_biosynthesis
L-2-amino-thiazoline-4-carboxylic acid hydrolase (EC 3.5.2.-)	L-2-amino-thiazoline-4-carboxylic_acid-Lcysteine_conversion
L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43)	L-Arabinose_utilization
Lactacin F ABC transporter permease component	Bacteriocin-like_peptides_Blp
Lactacin F immunity protein	Bacteriocin-like_peptides_Blp
Lactacin F transporter auxillary protein	Bacteriocin-like_peptides_Blp
Lactacin F two-component system response regulator	Bacteriocin-like_peptides_Blp
Lactacin F two-component system sensor histidine kinase	Bacteriocin-like_peptides_Blp
Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22)	L-fucose_utilization	L-rhamnose_utilization
Lactaldehyde reductase (EC 1.1.1.77)	L-fucose_utilization	L-rhamnose_utilization
Lactam utilization protein LAMB	EC699-706
Lactate 2-monooxygenase (EC 1.13.12.4)	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate
Lactate-responsive regulator LldR in Actinobacteria, GntR family	Lactate_utilization
Lactate-responsive regulator LldR in Betaproteobacteria, LysR family	Lactate_utilization
Lactate-responsive regulator LldR in Enterobacteria, GntR family	Lactate_utilization
Lactate-responsive regulator LldR in Firmicutes, GntR family	Lactate_utilization
Lactobacillus delbrueckii phage mv4 main capsid protein Gp34 homolog lin2390	Listeria_phi-A118-like_prophages
Lacto-N-biose phosphorylase (EC 2.4.1.211)	Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway
Lactose and galactose permease, GPH translocator family	Lactose_and_Galactose_Uptake_and_Utilization	Lactose_utilization
Lactose permease	Lactose_and_Galactose_Uptake_and_Utilization	Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Lactose_utilization
Lactose phosphotransferase system repressor	Lactose_and_Galactose_Uptake_and_Utilization
Lactoylglutathione lyase (EC 4.4.1.5)	Methylglyoxal_Metabolism	Glutathione:_Non-redox_reactions
Lactyl (2) diphospho-(5')guanosine:7,8-didemethyl-8-hydroxy-5-deazariboflavin 2-phospho-L-lactate transferase	Coenzyme_F420_synthesis
L-alanine-DL-glutamate epimerase	Recycling_of_Peptidoglycan_Amino_Acids	Muconate_lactonizing_enzyme_family
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44)	Pyruvate_Alanine_Serine_Interconversions	Photorespiration_(oxidative_C2_cycle)	Serine-glyoxylate_cycle
L-allo-threonine aldolase	Threonine_degradation
L-allo-threonine aldolase (EC 2.1.2.1)	Threonine_degradation
L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31)	Lysine_biosynthesis_AAA_pathway_2	Lysine_degradation
L-aminoadipate-semialdehyde dehydrogenase small subunit (EC 1.2.1.31)	Lysine_biosynthesis_AAA_pathway_2	Lysine_degradation
L-arabinolactonase (EC 3.1.1.15)	L-Arabinose_utilization	Entner-Doudoroff_Pathway
L-arabinose 1-dehydrogenase (EC 1.1.1.46)	L-Arabinose_utilization
L-arabinose-binding periplasmic protein precursor araF (TC 3.A.1.2.2)	L-Arabinose_utilization
L-arabinose isomerase (EC 5.3.1.4)	L-Arabinose_utilization
L-arabinose-specific 1-epimerase (mutarotase)	L-Arabinose_utilization
L-arabinose transport ATP-binding protein araG (TC 3.A.1.2.2)	L-Arabinose_utilization
L-arabinose transport system permease protein (TC 3.A.1.2.2)	L-Arabinose_utilization
L-arabonate dehydratase (EC 4.2.1.25)	L-Arabinose_utilization
Large-conductance mechanosensitive channel	Potassium_homeostasis	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Large subunit naph/bph dioxygenase	Biphenyl_Degradation
L-ascorbate oxidase precursor (EC 1.10.3.3)	Auxin_degradation
L-asparaginase (EC 3.5.1.1)	CBSS-316279.3.peg.746	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis
L-Aspartate dehydrogenase (EC 1.4.1.21)	NAD_and_NADP_cofactor_biosynthesis_global
L-aspartate oxidase (EC 1.4.3.16)	NAD_and_NADP_cofactor_biosynthesis_global	NAD_regulation	YgfZ
late competence protein B.cereus like ComG6, access of DNA to ComEA	Gram_Positive_Competence	gram_plus_late_competence
late competence protein B.cereus like ComG7, access of DNA to ComEA	Gram_Positive_Competence	gram_plus_late_competence
Late competence protein ComC, processing protease	Gram_Positive_Competence	gram_plus_late_competence	Late_competence
Late competence protein ComEA, DNA receptor	Gram_Positive_Competence	CBSS-1313.3.peg.391	gram_plus_late_competence	Late_competence
Late competence protein ComEB	CBSS-1313.3.peg.391	Late_competence
Late competence protein ComEC, DNA transport	Gram_Positive_Competence	CBSS-1313.3.peg.391	gram_plus_late_competence	Late_competence
Late competence protein ComER, proline oxidase (EC 1.5.1.2)	Proline_Synthesis	Late_competence
Late competence protein ComGA, access of DNA to ComEA	Gram_Positive_Competence	gram_plus_late_competence	Late_competence
Late competence protein ComGB, access of DNA to ComEA	Gram_Positive_Competence	gram_plus_late_competence	Late_competence
late competence protein ComGC, access of DNA to ComEA	Gram_Positive_Competence	gram_plus_late_competence
Late competence protein ComGC, access of DNA to ComEA, FIG007487	Late_competence
late competence protein ComGD, access of DNA to ComEA	Gram_Positive_Competence	gram_plus_late_competence
Late competence protein ComGD, access of DNA to ComEA, FIG012777	Late_competence
Late competence protein ComGD, access of DNA to ComEA, FIG038316	Late_competence
late competence protein ComGE, access of DNA to ComEA	Gram_Positive_Competence	gram_plus_late_competence
Late competence protein ComGE, FIG015513	Late_competence
Late competence protein ComGE, FIG015564	Late_competence
Late competence protein ComGE, FIG018915	Late_competence
Late competence protein ComGE, FIG075573	Late_competence
late competence protein ComGF, access of DNA to ComEA	Gram_Positive_Competence	gram_plus_late_competence
Late competence protein ComGF, access of DNA to ComEA, FIG012620	Late_competence
Late competence protein ComGF, access of DNA to ComEA, FIG017774	Late_competence
late competence protein ComGG, access of DNA to ComEA	Gram_Positive_Competence	gram_plus_late_competence
Late competence protein ComGG, FIG007920	Late_competence
Late competence protein ComGG, FIG028917	Late_competence
Late competence protein ComGG, FIG068335	Late_competence
Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis (Lauroyl/myristoyl acyltransferase)	CBSS-1806.1.peg.1285
L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	Lysine_fermentation	Lysine_degradation
L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	Lysine_fermentation	Lysine_degradation
L-carnitine dehydratase (EC:4.2.1.89)	carnitine_metabolism
L-carnitine/gamma-butyrobetaine antiporter	Carnitine_Metabolism_in_Microorganisms
L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC	Glutathione_analogs:_mycothiol
Leader peptidase (Prepilin peptidase) (EC 3.4.23.43)	Type_IV_pilus
L-ectoine synthase (EC 4.2.1.-)	Hyperosmotic_ectoine_biosynthesis
Legionaminic acid biosynthesis protein PtmA	Legionaminic_Acid_Biosynthesis
Legionaminic acid biosynthesis protein PtmF	Legionaminic_Acid_Biosynthesis
Legionaminic acid biosynthesis protein PtmG	Legionaminic_Acid_Biosynthesis
Legionaminic acid cytidylyltransferase (EC 2.7.7.43)	Legionaminic_Acid_Biosynthesis
Legionaminic acid synthase (EC 2.5.1.56)	Legionaminic_Acid_Biosynthesis
Leucine dehydrogenase (EC 1.4.1.9)	Branched-Chain_Amino_Acid_Biosynthesis	Branched_chain_amino_acid_degradation_regulons	Leucine_Degradation_and_HMG-CoA_Metabolism	Dehydrogenase_complexes
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein	Dehydrogenase_complexes
Leucoanthocyanidin dioxygenase (EC 1.14.11.19)	Tannin_biosynthesis
Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)	Protein_degradation
Leucyl-tRNA synthetase (EC 6.1.1.4)	tRNA_aminoacylation
Leucyl-tRNA synthetase (EC 6.1.1.4), mitochondrial	tRNA_aminoacylation,_mitochondrial
Leukotoxin LukD	Staphylococcus_Two-component_and_Pore-forming_Cytolysins
Leukotoxin LukE	Staphylococcus_Two-component_and_Pore-forming_Cytolysins
Leu operon leader peptide	Leucine_Biosynthesis
Levanase (EC 3.2.1.65)	Sucrose_Metabolism
Levansucrase (EC 2.4.1.10)	Sucrose_Metabolism
L-fuco-beta-pyranose dehydrogenase	L-fucose_utilization_temp
L-fuconate dehydratase (EC 4.2.1.68)	L-fucose_utilization	L-fucose_utilization_temp
L-fuconolactone hydrolase	L-fucose_utilization	L-fucose_utilization_temp
L-fucose isomerase (EC 5.3.1.25)	L-fucose_utilization
L-fucose mutarotase	L-fucose_utilization
L-fucose operon activator	L-fucose_utilization
L-fuculokinase (EC 2.7.1.51)	L-fucose_utilization
L-fuculose phosphate aldolase (EC 4.1.2.17)	L-fucose_utilization
L-idonate 5-dehydrogenase (EC 1.1.1.264)	D-gluconate_and_ketogluconates_metabolism
L-idonate, D-gluconate, 5-keto-D-gluconate transporter	D-gluconate_and_ketogluconates_metabolism
Light dependent period modulator LdpA	Cyanobacterial_Circadian_Clock
Light-dependent protochlorophyllide reductase (EC 1.3.1.33)	Chlorophyll_Biosynthesis
Light-harvesting LHI, alpha subunit	Photosystem_II-type_photosynthetic_reaction_center	Bacterial_light-harvesting_proteins
Light-harvesting LHI, beta subunit	Photosystem_II-type_photosynthetic_reaction_center	Bacterial_light-harvesting_proteins
Light-harvesting LHII, alpha subunit A	Bacterial_light-harvesting_proteins
Light-harvesting LHII, alpha subunit B	Bacterial_light-harvesting_proteins
Light-harvesting LHII, alpha subunit C	Bacterial_light-harvesting_proteins
Light-harvesting LHII, alpha subunit D	Bacterial_light-harvesting_proteins
Light-harvesting LHII, alpha subunit E	Bacterial_light-harvesting_proteins
Light-harvesting LHII, alpha subunit F	Bacterial_light-harvesting_proteins
Light-harvesting LHII, alpha subunit G	Bacterial_light-harvesting_proteins
Light-harvesting LHII, beta subunit A	Bacterial_light-harvesting_proteins
Light-harvesting LHII, beta subunit B	Bacterial_light-harvesting_proteins
Light-harvesting LHII, beta subunit C	Bacterial_light-harvesting_proteins
Light-harvesting LHII, beta subunit D	Bacterial_light-harvesting_proteins
Light-harvesting LHII, beta subunit E	Bacterial_light-harvesting_proteins
Light-harvesting LHII, beta subunit F	Bacterial_light-harvesting_proteins
Light-harvesting LHII, beta subunit G	Bacterial_light-harvesting_proteins
Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL (EC 1.18.-.-)	Chlorophyll_Biosynthesis
Light-independent protochlorophyllide reductase subunit B (EC 1.18.-.-)	Chlorophyll_Biosynthesis
Light-independent protochlorophyllide reductase subunit N (EC 1.18.-.-)	Chlorophyll_Biosynthesis
lignostilbene-alpha,beta-dioxygenase	Phenylpropanoid_compound_degradation
Lignostilbene-alpha,beta-dioxygenase and related enzymes	Phenylpropanoid_compound_degradation
Lin1875 protein	CBSS-393121.3.peg.1913
Lipase activator protein, Lipase-specific foldase	Cytolysin_and_Lipase_operon_in_Vibrio
Lipase/Acylhydrolase with GDSL-like motif	CBSS-370552.3.peg.1240
Lipase precursor (EC 3.1.1.3)	Cytolysin_and_Lipase_operon_in_Vibrio
Lipid A acylation protein PagP, palmitoyltransferase	Lipid_A_modifications
Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-)	KDO2-Lipid_A_biosynthesis
Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	KDO2-Lipid_A_biosynthesis
Lipid-A-disaccharide synthase (EC 2.4.1.182)	KDO2-Lipid_A_biosynthesis
Lipid A export ATP-binding/permease protein MsbA	ZZ_gjo_need_homes
Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)	KDO2-Lipid_A_biosynthesis	Lipopolysaccharide-related_cluster_in_Alphaproteobacteria
Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-)	CBSS-296591.1.peg.2330	N-linked_Glycosylation_in_Bacteria
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.-)	Valine_degradation	Isoleucine_degradation
Lipoate-protein ligase A	Lipoic_acid_metabolism	Glycine_cleavage_system	Dehydrogenase_complexes
Lipoate-protein ligase A, C-terminal 70 percent	Lipoic_acid_metabolism
Lipoate-protein ligase A, N-terminal 30 percent	Lipoic_acid_metabolism
Lipoate synthase	Lipoic_acid_metabolism	CBSS-176279.3.peg.298	Competence_or_DNA_damage-inducible_protein_CinA_and_related_protein_families	YgfZ
Lipoate synthase, cyanobacterial paralog	Lipoic_acid_metabolism
Lipocalin-related protein and Bos/Can/Equ allergen	Sulfur_oxidation
Lipopolysaccharide 1,2-N-acetylglucosaminetransferase (EC 2.4.1.56)	LOS_core_oligosaccharide_biosynthesis
Lipopolysaccharide 1,6-galactosyltransferase (EC 2.4.1.-)	LOS_core_oligosaccharide_biosynthesis
Lipopolysaccharide ABC transporter, ATP-binding protein LptB	KDO2-Lipid_A_biosynthesis	Lipopolysaccharide_assembly
Lipopolysaccharide biosynthesis glycosyltransferase	Vibrio_Core_Oligosaccharide_Biosynthesis
lipopolysaccharide biosynthesis protein, putative	Vibrio_Core_Oligosaccharide_Biosynthesis
Lipopolysaccharide biosynthesis protein wzxC	Colanic_acid_biosynthesis
Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-)	Teichoic_and_lipoteichoic_acids_biosynthesis	Phosphorylcholine_incorporation_in_LPS
Lipopolysaccharide cholinephosphotransferase LicD3 (EC 2.7.8.-)	Teichoic_and_lipoteichoic_acids_biosynthesis	Exopolysaccharide_Biosynthesis
Lipopolysaccharide core biosynthesis glycosyltransferase, group 2 family protein (EC 2.4.1.-)	LOS_core_oligosaccharide_biosynthesis
Lipopolysaccharide core biosynthesis protein RfaY	LOS_core_oligosaccharide_biosynthesis
Lipopolysaccharide core biosynthesis protein RfaZ	LOS_core_oligosaccharide_biosynthesis
Lipopolysaccharide core biosynthesis protein WaaP (EC 2.7.-.-), heptosyl-I-kinase	LOS_core_oligosaccharide_biosynthesis
Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-)	Vibrio_Core_Oligosaccharide_Biosynthesis	LOS_core_oligosaccharide_biosynthesis
Lipopolysaccharide heptosyltransferase III (EC 2.4.1.-)	LOS_core_oligosaccharide_biosynthesis
Lipopolysaccharide synthesis protein WavD	Vibrio_Core_Oligosaccharide_Biosynthesis
Lipopolysaccharide synthesis protein WavE	Vibrio_Core_Oligosaccharide_Biosynthesis
lipoprotein B	CBSS-221988.1.peg.2137
Lipoprotein NlpD precursor	CBSS-221988.1.peg.2137
Lipoprotein of type IV secretion complex that spans outer membrane and periplasm (VirB7)	Type_4_secretion_and_conjugative_transfer
Lipoprotein releasing system ATP-binding protein LolD	Lipoprotein_sorting_system	Lipopolysaccharide_assembly
Lipoprotein releasing system transmembrane protein LolC	Lipoprotein_sorting_system	Lipopolysaccharide_assembly
Lipoprotein releasing system transmembrane protein LolE	Lipoprotein_sorting_system	Lipopolysaccharide_assembly
Lipoprotein signal peptidase (EC 3.4.23.36)	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Signal_peptidase	Lipoprotein_Biosynthesis
Lipoxygenase, chloroplast precursor (EC 1.13.11.12)	Octadecanoids
Lipoxygenase (EC 1.13.11.12)	Octadecanoids
L-lactate dehydrogenase (EC 1.1.1.27)	Fermentations:_Mixed_acid	Fermentations:_Lactate
L-lactate dehydrogenase (EC 1.1.2.3)	Lactate_utilization	Respiratory_dehydrogenases_1
L-lactate permease	Lactate_utilization
L,L-diaminopimelate aminotransferase (EC 2.6.1.83)	Lysine_Biosynthesis_DAP_Pathway
LL-diaminopimelate aminotransferase, predicted alternative	Lysine_Biosynthesis_DAP_Pathway
L-lysine aminomutase regulator	Lysine_degradation
L-lysine permease	Lysine_fermentation	Lysine_degradation
Lmo0065 homolog within ESAT-6 gene cluster	ESAT-6_proteins_secretion_system_in_Firmicutes
Lmo0066 homolog within ESAT-6 gene cluster, similarity to ADP-ribosylating toxins	ESAT-6_proteins_secretion_system_in_Firmicutes
Lmo0069 homolog within ESAT-6 gene cluster	ESAT-6_proteins_secretion_system_in_Firmicutes
Lmo0312 protein	CBSS-159087.4.peg.2189
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Carbonate_Biomineralization	CBSS-83332.1.peg.3803	n-Phenylalkanoic_acid_degradation	CBSS-83332.1.peg.1531	Unsaturated_Fatty_Acid_Metabolism	Biotin_biosynthesis	Fatty_acid_degradation_regulons
Long-chain-fatty-acid--luciferin-component ligase (EC 6.2.1.19)	Biolumenescence
Long-chain fatty acid transport protein	Fatty_acid_degradation_regulons
Lon-like protease with PDZ domain	Proteasome_bacterial
L-ornithine 5-monooxygenase (EC 1.13.12.-), PvdA of pyoverdin biosynthesis	Pyoverdine_biosynthesis_new
Low-affinity CO2 hydration protein CphX	CO2_uptake,_carboxysome
Low-affinity gluconate/H+ symporter GntU	D-gluconate_and_ketogluconates_metabolism
Low-affinity inorganic phosphate transporter	Phosphate_metabolism
Low G+C gram positive nudix hydrolase YtkD (EC 3.6.-.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	LMPTP_YwlE_cluster	LMPTP_YfkJ_cluster	CBSS-176280.1.peg.1561	CBSS-176279.3.peg.1389	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Low molecular weight protein-tyrosine-phosphatase Wzb (EC 3.1.3.48)	Capsular_Polysaccharides_Biosynthesis_and_Assembly	Colanic_acid_biosynthesis
low-specificity D-threonine aldolase	Serine-glyoxylate_cycle	Threonine_degradation
Low-specificity L-threonine aldolase (EC 4.1.2.5)	Glycine_Biosynthesis	Threonine_degradation
Low temperature requirement B protein	CBSS-281309.1.peg.50
Low temperature requirement C protein	CBSS-393123.3.peg.2365
L-pipecolate dehydrogenase (EC 1.5.99.3)	Lysine_degradation
L-pipecolate oxidase (1.5.3.7)	Lysine_degradation
LppC putative lipoprotein	CBSS-160492.1.peg.550
L-proline Glycine Betaine ABC transport ATP-binding protein proV (TC 3.A.1.12.1)	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	ABC_transporter_L-proline_glycine_betaine_(TC_3.A.1.12.1)
L-proline Glycine Betaine ABC transport system permease protein proW (TC 3.A.1.12.1)	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	ABC_transporter_L-proline_glycine_betaine_(TC_3.A.1.12.1)
L-proline glycine betaine binding ABC transporter protein proX (TC 3.A.1.12.1)	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	ABC_transporter_L-proline_glycine_betaine_(TC_3.A.1.12.1)
L-Proline/Glycine betaine transporter ProP	Proline,_4-hydroxyproline_uptake_and_utilization
LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	KDO2-Lipid_A_biosynthesis
LptA, protein essential for LPS transport across the periplasm	KDO2-Lipid_A_biosynthesis	Lipopolysaccharide_assembly
LPXTG specific sortase A	Sortase	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
LrgA-associated membrane protein LrgB	Murein_hydrolase_regulation_and_cell_death
L-rhamnose isomerase (EC 5.3.1.14)	L-rhamnose_utilization
L-rhamnose mutarotase	L-rhamnose_utilization
L-rhamnose operon regulatory protein rhaS	L-rhamnose_utilization
L-rhamnose operon transcriptional activator rhaR	L-rhamnose_utilization
L-rhamnose-proton symporter	L-rhamnose_utilization
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	L-ascorbate_utilization_(and_related_gene_clusters)	L-Arabinose_utilization
L-serine dehydratase 1 (EC 4.3.1.17)	Glycine_and_Serine_Utilization
L-serine dehydratase, alpha subunit (EC 4.3.1.17)	Pyruvate_Alanine_Serine_Interconversions	Glycine_and_Serine_Utilization
L-serine dehydratase, beta subunit (EC 4.3.1.17)	Pyruvate_Alanine_Serine_Interconversions	Glycine_and_Serine_Utilization
L-serine dehydratase (EC 4.3.1.17)	Pyruvate_Alanine_Serine_Interconversions	Glycine_cleavage_system	Glycine_and_Serine_Utilization
L-seryl-tRNA(Sec) kinase	Selenocysteine_metabolism
L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	Selenocysteine_metabolism
L-sorbose 1-phosphate reductase (EC 1.1.1.-)	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
LsrR, transcriptional repressor of lsr operon	Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)
LSU m3Psi1915 methyltransferase RlmH	rRNA_modification_Bacteria	NAD_and_NADP_cofactor_biosynthesis_global	SA:14-24	Ribosome_biogenesis_bacterial	tRNA_modification_Bacteria
LSU m5C1962 methyltransferase RlmI	Ribosome_biogenesis_bacterial	tRNA_modification_Bacteria	CBSS-83333.1.peg.946	CBSS-326442.4.peg.1852
LSU ribosomal protein L10Ae (L1p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L10e (L16p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L10p (P0)	Ribosome_LSU_bacterial
LSU ribosomal protein L10p (P0), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L10p (P0), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L11e (L5p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L11p (L12e)	Ribosome_LSU_bacterial
LSU ribosomal protein L11p (L12e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L11p (L12e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L12a (P1/P2)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L12e (L11p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L13Ae (L13p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L13e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L13p (L13Ae)	Ribosome_LSU_bacterial
LSU ribosomal protein L13p (L13Ae), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L13p (L13Ae), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L14e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L14p (L23e)	Ribosome_LSU_bacterial
LSU ribosomal protein L14p (L23e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L14p (L23e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L15e	Proteasome_subunit_alpha_archaeal_cluster	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L15p (L27Ae)	Ribosome_LSU_bacterial
LSU ribosomal protein L15p (L27Ae), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L15p (L27Ae), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L16p (L10e)	Ribosome_LSU_bacterial
LSU ribosomal protein L16p (L10e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L16p (L10e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L17e (L22p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L17p	Ribosome_LSU_bacterial
LSU ribosomal protein L17p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L17p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L18Ae	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L18e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L18p (L5e)	Ribosome_LSU_bacterial
LSU ribosomal protein L18p (L5e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L18p (L5e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L19e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L19p	Ribosome_LSU_bacterial
LSU ribosomal protein L19p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L19p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L1e (L4p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L1p (L10Ae)	Ribosome_LSU_bacterial
LSU ribosomal protein L1p (L10Ae), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L1p (L10Ae), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L20p	Ribosome_LSU_bacterial
LSU ribosomal protein L20p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L20p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L21e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L21p	CBSS-176279.3.peg.868	Ribosome_LSU_bacterial
LSU ribosomal protein L21p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L21p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L22e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L22p (L17e)	Ribosome_LSU_bacterial
LSU ribosomal protein L22p (L17e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L22p (L17e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L23Ae (L23p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L23e (L14p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L23p (L23Ae)	Ribosome_LSU_bacterial
LSU ribosomal protein L23p (L23Ae), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L23p (L23Ae), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L24e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L24p (L26e)	Ribosome_LSU_bacterial
LSU ribosomal protein L24p (L26e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L24p (L26e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L25p	Ribosome_LSU_bacterial
LSU ribosomal protein L25p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L26e (L24p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L27Ae (L15p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L27e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L27p	CBSS-176279.3.peg.868	Ribosome_LSU_bacterial
LSU ribosomal protein L27p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L27p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L28e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L28p	Ribosome_LSU_bacterial	A_Gram-positive_cluster_that_relates_ribosomal_protein_L28P_to_a_set_of_uncharacterized_proteins
LSU ribosomal protein L28p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L28p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L29e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L29p (L35e)	Ribosome_LSU_bacterial
LSU ribosomal protein L29p (L35e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L2p (L8e)	Ribosome_LSU_bacterial
LSU ribosomal protein L2p (L8e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L2p (L8e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L30e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L30p (L7e)	Ribosome_LSU_bacterial
LSU ribosomal protein L30p (L7e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L31e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L31p	Ribosome_LSU_bacterial
LSU ribosomal protein L31p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L31p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L32e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L32p	CBSS-198215.1.peg.1051	Ribosome_LSU_bacterial	CBSS-222523.1.peg.3937
LSU ribosomal protein L32p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L32p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L33p	Ribosome_LSU_bacterial
LSU ribosomal protein L33p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L33p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L34e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L34p	Ribosome_LSU_bacterial
LSU ribosomal protein L34p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L34p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L35Ae	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L35e (L29p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L35p	Ribosome_LSU_bacterial
LSU ribosomal protein L35p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L36e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L36p	Ribosome_LSU_bacterial
LSU ribosomal protein L36p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L36p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L37Ae	Proteasome_subunit_alpha_archaeal_cluster	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L37e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L37mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L38e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L38mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L39e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L39mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L3e (L3p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L3p (L3e)	Ribosome_LSU_bacterial
LSU ribosomal protein L3p (L3e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L3p (L3e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L40e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L40mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L41e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L41mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L42mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L43mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L44e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L44mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L45mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L46mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L47mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L48mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L49mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L4p (L1e)	Ribosome_LSU_bacterial
LSU ribosomal protein L4p (L1e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L4p (L1e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L50mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L51mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L52mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L53mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L54mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L55mt, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L5e (L18p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L5p (L11e)	Ribosome_LSU_bacterial
LSU ribosomal protein L5p (L11e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L5p (L11e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L6e	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L6p (L9e)	Ribosome_LSU_bacterial
LSU ribosomal protein L6p (L9e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L6p (L9e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L7Ae	rRNA_modification	Ribosome_LSU_eukaryotic_and_archaeal	rRNA_modification_Archaea
LSU ribosomal protein L7e (L30p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L7/L12 (L23e)	Ribosome_LSU_bacterial
LSU ribosomal protein L7/L12 (L23e), chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L7/L12 (L23e), mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein L8e (L2p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L9e (L6p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein L9p	CBSS-262719.3.peg.410	SA:14-24	Ribosome_LSU_bacterial
LSU ribosomal protein L9p, chloroplast	Ribosome_LSU_chloroplast
LSU ribosomal protein L9p, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein MRP51, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein MRPL13, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein MRPL15, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein MRPL20, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein MRPL25, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein MRPL31, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein MRPL35, mitochondrial	Ribosome_LSU_mitochondrial
LSU ribosomal protein P0 (L10p)	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein P1	Ribosome_LSU_eukaryotic_and_archaeal
LSU ribosomal protein P2	Ribosome_LSU_eukaryotic_and_archaeal
LSU rRNA	rRNAs
L-threonine 3-dehydrogenase (EC 1.1.1.103)	Glycine_Biosynthesis	Threonine_degradation
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	Cobalamin_synthesis	Coenzyme_B12_biosynthesis
L-threonine transporter, anaerobically inducible	Threonine_anaerobic_catabolism_gene_cluster	Threonine_degradation
Lumazine protein, riboflavin synthase homolog	Riboflavin,_FMN_and_FAD_metabolism
LuxA, luciferase alpha chain (EC 1.14.14.3)	Biolumenescence	Luciferases
LuxB, luciferase beta chain (EC 1.14.14.3)	Biolumenescence	Luciferases
LuxC, acyl-CoA reductase (EC 1.2.1.50)	Biolumenescence	Luciferases
LuxD. acyl transferase (EC 2.3.1.-)	Biolumenescence	Luciferases
LuxE, long-chain-fatty-acid ligase (EC 6.2.1.19)	Biolumenescence	Luciferases
LuxG, NAD(P)H-dependent FMN reductase (EC 1.5.1.29)	Biolumenescence	Luciferases
L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-)	L-ascorbate_utilization_(and_related_gene_clusters)
L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)	L-ascorbate_utilization_(and_related_gene_clusters)
L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) homolog	L-ascorbate_utilization_(and_related_gene_clusters)
Lycopene beta cyclase (EC 1.14.-.-)	Carotenoids	Proteorhodopsin
Lycopene cyclase	Carotenoids
Lycopene cyclase, CruA type	Myxoxanthophyll_biosynthesis_in_Cyanobacteria	Proteorhodopsin
Lycopene elongase (EC 2.5.1.-)	Carotenoids
Lycopene epsilon cyclase	Carotenoids
Lysine 2,3-aminomutase (EC 5.4.3.2)	Lysine_fermentation	Lysine_degradation
Lysine 2-monooxygenase (EC 1.13.12.2)	Lysine_degradation
Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)	Arginine_and_Ornithine_Degradation
Lysine biosynthesis protein LysX	Lysine_biosynthesis_AAA_pathway_2
Lysine/cadaverine antiporter membrane protein CadB	Lysine_degradation
Lysine decarboxylase 2, constitutive (EC 4.1.1.18)	Lysine_degradation
Lysine decarboxylase (EC 4.1.1.18)	Lysine_degradation
Lysine decarboxylase, inducible (EC 4.1.1.18)	Lysine_degradation
Lysine efflux permease	CBSS-316407.3.peg.2816
Lysine ketoglutarate reductase (EC 1.5.1.8) (LOR) (LKR)	Lysine_degradation
Lysine-specific permease	YeiH
Lysophospholipase (EC 3.1.1.5)	Triacylglycerol_metabolism	Glutathione_analogs:_mycothiol
Lysophospholipase L2 (EC 3.1.1.5)	Triacylglycerol_metabolism
LysR family regulatory protein CidR	Murein_hydrolase_regulation_and_cell_death
LysR-family transcriptional regulator clustered with PA0057	PA0057_cluster
LysR family transcriptional regulator lrhA	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA0133	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA0191	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA0739	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA1145	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA2758	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA2877	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA3398	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA4989	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA5218	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator PA5437	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator STM2281	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator STM3121	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator YbbS	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator YbhD	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator YcjZ	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator YdcI	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator YeiE	YeiH
LysR family transcriptional regulator YfeR	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator YfiE	DNA-binding_regulatory_proteins,_strays
LysR-family transcriptional regulator YhaJ	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein
LysR family transcriptional regulator YhjC	DNA-binding_regulatory_proteins,_strays	Inner_membrane_protein_YhjD_and_conserved_cluster_involved_in_LPS_biosynthesis
LysR family transcriptional regulator YneJ	DNA-binding_regulatory_proteins,_strays
LysR family transcriptional regulator YnfL	DNA-binding_regulatory_proteins,_strays
LysR-type transcriptional regulator for nopaline catabolism NocR	Agrobacterium_opine_transport
Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	tRNA_aminoacylation
Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	tRNA_aminoacylation
Lysyl-tRNA synthetase (class II) (EC 6.1.1.6), mitochondrial	tRNA_aminoacylation,_mitochondrial
LytH protein involved in methicillin resistance	Methicillin_resistance_in_Staphylococci
Lytic enzyme, amidase [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)	Multidrug_Resistance_Efflux_Pumps
Macrolide-specific efflux protein MacA	Multidrug_Resistance_Efflux_Pumps
macromolecule metabolism	CBSS-316057.3.peg.1308
macromolecule synthesis, modification	CBSS-316057.3.peg.1308
Macrophage infectivity potentiator/GldI	Bacterial_motility:Gliding
Magnesium and cobalt efflux protein CorC	CBSS-56780.10.peg.1536	Copper_homeostasis:_copper_tolerance	Putative_hemin_transporter	Phosphate_metabolism
Magnesium and cobalt transport protein CorA	Campylobacter_Iron_Metabolism
Main regulator of heterocyst differentiation HetR	Heterocyst_formation_in_cyanobacteria
Major capsid protein [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Major cell-binding factor precursor PebA	Adhesion_of_Campylobacter
Major curlin subunit precursor CsgA	Curli_production
Major facilitator superfamily (MFS) transporter	CBSS-292415.3.peg.2341
Major facilitator superfamily (MFS) transporter in predicted poly-gamma-glutamate synthase operon	Poly-gamma-glutamate_biosynthesis
Major myo-inositol transporter IolT	Inositol_catabolism
Major pilus subunit of type IV secretion complex (VirB2)	Type_4_secretion_and_conjugative_transfer
Major pilus subunit of type IV secretion complex, VirB2	Plasmid-encoded_T-DNA_transfer
Major tail shaft protein [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Malate dehydrogenase (EC 1.1.1.37)	Glyoxylate_bypass	TCA_Cycle	Serine-glyoxylate_cycle
Malate Na(+) symporter	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Malate permease	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Malate:quinone oxidoreductase (EC 1.1.99.16)	TCA_Cycle
Malate synthase (EC 2.3.3.9)	Glyoxylate_bypass	Photorespiration_(oxidative_C2_cycle)	Serine-glyoxylate_cycle
Malate synthase G (EC 2.3.3.9)	Glyoxylate_bypass	Glycolate,_glyoxylate_interconversions	Photorespiration_(oxidative_C2_cycle)	Serine-glyoxylate_cycle
Malate synthase-related protein	Serine-glyoxylate_cycle
Maleate cis-trans isomerase (EC 5.2.1.1)	Salicylate_and_gentisate_catabolism	Gentisare_degradation
Maleylacetoacetate isomerase (EC 5.2.1.2)	Salicylate_and_gentisate_catabolism	Pterin_metabolism_3	Homogentisate_pathway_of_aromatic_compound_degradation	Gentisare_degradation
Maleylpyruvate isomerase, mycothiol-dependent (EC 5.2.1.4)	Glutathione_analogs:_mycothiol
Malolactic enzyme (EC 1.-.-.-)	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Malolactic regulator	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Malonate decarboxylase alpha subunit	Malonate_decarboxylase
Malonate decarboxylase beta subunit	Malonate_decarboxylase
Malonate decarboxylase delta subunit	Malonate_decarboxylase
Malonate decarboxylase gamma subunit	Malonate_decarboxylase
Malonate transporter, MadL subunit	Malonate_decarboxylase
Malonate transporter, MadM subunit	Malonate_decarboxylase
Malonate utilization transcriptional regulator	Malonate_decarboxylase
Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)	Malonate_decarboxylase
Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	mycolic_acid_synthesis	CBSS-198215.1.peg.1051	Fatty_Acid_Biosynthesis_FASII
Maltodextrin glucosidase (EC 3.2.1.20)	Sucrose_Metabolism	Maltose_and_Maltodextrin_Utilization
Maltodextrin phosphorylase (EC 2.4.1.1)	Maltose_and_Maltodextrin_Utilization	Glycogen_metabolism
Maltodextrose utilization protein MalA	Maltose_and_Maltodextrin_Utilization
Malto-oligosyltrehalose synthase (EC 5.4.99.15)	Maltose_and_Maltodextrin_Utilization	Glycogen_metabolism	Trehalose_Biosynthesis
Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)	Trehalose_Biosynthesis
Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	Maltose_and_Maltodextrin_Utilization	Trehalose_Uptake_and_Utilization	Major_Outer_Membrane_Proteins
Maltose-6'-phosphate glucosidase (EC 3.2.1.122)	Maltose_and_Maltodextrin_Utilization	Trehalose_Uptake_and_Utilization
Maltose/maltodextrin ABC transporter, permease protein MalF	Maltose_and_Maltodextrin_Utilization
Maltose/maltodextrin ABC transporter, permease protein MalG	Maltose_and_Maltodextrin_Utilization
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	Alpha-Amylase_locus_in_Streptocococcus	Maltose_and_Maltodextrin_Utilization	Bacterial_Chemotaxis
Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	Maltose_and_Maltodextrin_Utilization
Maltose O-acetyltransferase (EC 2.3.1.79)	Maltose_and_Maltodextrin_Utilization	CBSS-196620.1.peg.2477
Maltose operon periplasmic protein MalM	Maltose_and_Maltodextrin_Utilization
Maltose operon transcriptional repressor MalR, LacI family	Maltose_and_Maltodextrin_Utilization
Maltose phosphorylase (EC 2.4.1.8)	Maltose_and_Maltodextrin_Utilization
Maltose regulon modulator	Maltose_and_Maltodextrin_Utilization
Maltose regulon regulatory protein MalI (repressor for malXY)	Maltose_and_Maltodextrin_Utilization
Malyl-CoA lyase (EC 4.1.3.24)	Glyoxylate_bypass	Photorespiration_(oxidative_C2_cycle)	Serine-glyoxylate_cycle
mandelate racemase/muconate lactonizing enzyme family protein	Catechol_branch_of_beta-ketoadipate_pathway
Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)	Phosphate_metabolism
Manganese-dependent protein-tyrosine phosphatase (EC 3.1.3.48)	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Exopolysaccharide_Biosynthesis
Manganese superoxide dismutase (EC 1.15.1.1)	Bsub-Spore-Coat	Oxidative_stress	Spore_Coat	Protection_from_Reactive_Oxygen_Species
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)	Hexitol_degradation	Mannitol_Utilization
Mannitol operon activator, BglG family	Mannitol_Utilization
Mannitol operon repressor	Mannitol_Utilization
Mannonate dehydratase (EC 4.2.1.8)	D-Galacturonate_Utilization	D-Galacturonate_and_D-Glucuronate_Utilization	Sugar_utilization_in_Thermotoga	Entner-Doudoroff_Pathway
Mannopine transporter ATP-binding protein MotB	Agrobacterium_opine_transport
Mannopine transporter periplasmic substrate-binding protein MotA	Agrobacterium_opine_transport
Mannopine transporter permease protein MotC	Agrobacterium_opine_transport
Mannopine transporter permease protein MotD	Agrobacterium_opine_transport
Mannopinic acid transporter ATP-binding protein MoaD	Agrobacterium_opine_transport
Mannopinic acid transporter periplasmic substrate-binding protein MoaA	Agrobacterium_opine_transport
Mannopinic acid transporter permease protein MoaB	Agrobacterium_opine_transport
Mannopinic acid transporter permease protein MoaC	Agrobacterium_opine_transport
Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 )	Mannose_Metabolism
Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	Alginate_metabolism	Perosamine_Synthesis_Vibrio	Mannose_Metabolism
Mannose-6-phosphate isomerase (EC 5.3.1.8)	Alginate_metabolism	Sugar_utilization_in_Thermotogales	Mannose_Metabolism
mannose-specific adhesin FimH	Type_1_pili_(mannose-sensitive_fimbriae)
Mannosides-regulated TonB-dependent outer membrane receptor	Ton_and_Tol_transport_systems	Mannose_Metabolism
Mannosyltransferase OCH1 and related enzymes	Vibrio_Core_Oligosaccharide_Biosynthesis
MaoC domain protein dehydratase	CBSS-216591.1.peg.168
MaoC-like dehydratase	CBSS-216591.1.peg.168
match to protein family HMM PF06676	CBSS-216591.1.peg.168
Matrix metallopeptidase-2	MT1-MMP_Pericellular_Network
MazG protein domain	Nucleoside_triphosphate_pyrophosphohydrolase_MazG
MdtR transcriptional regulator, MarR family	Multidrug_Resistance_Operon_mdtRP_of_Bacillus
Meiosis-specific DNA cleavage protein SPO11	DNA_topoisomerases,_Type_II,_ATP-dependent
Melibiose carrier protein, Na+/melibiose symporter	Melibiose_Utilization
Melibiose operon regulatory protein	Melibiose_Utilization
Membrane alanine aminopeptidase N (EC 3.4.11.2)	Glutathione_Redox_Metabolism_3	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Protein_degradation
Membrane-associated zinc metalloprotease	CBSS-83331.1.peg.3039	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Periplasmic_Stress_Response
Membrane-attached cytochrome c550	Soluble_cytochromes_and_functionally_related_electron_carriers
Membrane-bound lysozyme inhibitor of c-type lysozyme	Lysozyme_inhibitors
Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)	Murein_Hydrolases
Membrane-bound lytic murein transglycosylase B (EC 3.2.1.-)	CBSS-243277.1.peg.4359
Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	Murein_Hydrolases	Peptidoglycan_Biosynthesis	CBSS-243277.1.peg.4359	Peptidoglycan_Biosynthesis_2
Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-)	Murein_Hydrolases	CBSS-228410.1.peg.134
Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	Methylglyoxal_Metabolism	Murein_Hydrolases	CBSS-228410.1.peg.134	CBSS-342610.3.peg.1536
Membrane-bound lytic murein transglycosylase E (EC 3.2.1.-)	Murein_Hydrolases
Membrane component of multidrug resistance system	Multidrug_Resistance,_2-protein_version_Found_in_Gram-positive_bacteria
membrane c-type cytochrome cy	Terminal_cytochrome_C_oxidases
membrane docking protein	Reductive_Dechlorination
Membrane fusion component of tripartite multidrug resistance system	Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria
Membrane fusion protein of RND family multidrug efflux pump	Multidrug_Resistance_Efflux_Pumps
Membrane lipoprotein lipid attachment site containing protein USSDB6D	USS-DB-6
Membrane protein associated with methylmalonyl-CoA decarboxylase	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Membrane protein associated with oxaloacetate decarboxylase	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	CBSS-56780.10.peg.1536
Membrane protein DUF2324 in 2-Ketogluconate Utilization cluster	2-Ketogluconate_Utilization
Membrane Protein Functionally coupled to the MukBEF Chromosome Partitioning Mechanism	MukBEF_Chromosome_Condensation
membrane protein, inferred for ABFAE pathway	CBSS-218491.3.peg.427
Membrane proteins related to metalloendopeptidases	cAMP_signaling_in_bacteria	CBSS-393121.3.peg.2760
Membrane protein, suppressor for copper-sensitivity ScsB	Copper_homeostasis:_copper_tolerance
Membrane protein, suppressor for copper-sensitivity ScsD	Flavohaemoglobin	Copper_homeostasis:_copper_tolerance
Membrane protein SypL involved in exopolysaccharide production	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Membrane protein YciC, linked to IspA	Intracellular_septation_in_Enterobacteria
Membrane transporter HdeD, H-NS repressed	Periplasmic_Acid_Stress_Response_in_Enterobacteria
Membrane-type matrix metallopeptidase-1	MT1-MMP_Pericellular_Network
Menaquinone-cytochrome C oxidoreductase, cytochrome C subunit	Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes
Menaquinone-cytochrome c reductase, cytochrome B subunit	Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	CBSS-393130.3.peg.129
Menaquinone-cytochrome C reductase iron-sulfur subunit	Ubiquinone_Menaquinone-cytochrome_c_reductase_complexes	CBSS-393130.3.peg.129
Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	Menaquinone_and_Phylloquinone_Biosynthesis	Siderophore_enterobactin_biosynthesis_and_ferric_enterbactin_transport
Menaquinone via futalosine step 1	Menaquinone_Biosynthesis_via_Futalosine
Menaquinone via futalosine step 2	Menaquinone_Biosynthesis_via_Futalosine
Menaquinone via futalosine step 2, possible alternative	Menaquinone_Biosynthesis_via_Futalosine
Menaquinone via futalosine step 3	Menaquinone_Biosynthesis_via_Futalosine
Menaquinone via futalosine step 4	Menaquinone_Biosynthesis_via_Futalosine
Mercuric ion reductase (EC:1.16.1.1)	Mercuric_reductase	Mercury_resistance_operon
Mercuric reductase (EC 1.16.1.1)	Staphylococcus_aureus_hypothetical_repetitive_gene_loci	Mercuric_reductase
Mercuric resistance operon coregulator	Mercury_resistance_operon
Mercuric resistance operon regulatory protein	Mercury_resistance_operon
Mercuric transport protein, MerC	Mercury_resistance_operon
Mercuric transport protein, MerE	Mercury_resistance_operon
Mercuric transport protein, MerT	Mercury_resistance_operon
Mesaconyl-CoA hydratase	Glyoxylate_bypass
Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	Lysine_Biosynthesis_DAP_Pathway
Metal-dependent hydrolase COG0491 with rhodanese-homology domain (RHOD)	CBSS-261594.1.peg.2640
Metal-dependent hydrolase involved in phosphonate metabolism	Alkylphosphonate_utilization
Metal-dependent hydrolases of the beta-lactamase superfamily I	Beta-lactamase
Metal-dependent hydrolases of the beta-lactamase superfamily II	Beta-lactamase
Metal-dependent hydrolases of the beta-lactamase superfamily III	Beta-lactamase
Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein	Alkylphosphonate_utilization
Metallo-beta-lactamase family protein, RNA-specific	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases
Metallo-beta-lactamase superfamily domain protein in prophage	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Metallo-beta-lactamase superfamily protein PA0057	PA0057_cluster
Metalloprotease Eep, required for pheromone maturation	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Metalloprotease, putative zinc-binding domain	Cytolysin_and_Lipase_operon_in_Vibrio
Metallothionein	Oxidative_stress
Methanol:corrinoid methyltransferase	Methanogenesis_from_methylated_compounds
Methanol dehydrogenase large subunit protein (EC 1.1.99.8)	Respiratory_dehydrogenases_1	CBSS-316056.14.peg.1887
Methanol methyltransferase corrinoid protein	Methanogenesis_from_methylated_compounds
Methanophenazine hydrogenase cytochrome b subunit (EC 1.12.98.3)	Hydrogenases	Methanophenazine_hydrogenase
Methanophenazine hydrogenase large subunit (EC 1.12.98.3)	NiFe_hydrogenase_maturation	Hydrogenases	Methanophenazine_hydrogenase
Methanophenazine hydrogenase maturation protease (EC 3.4.24.-)	Hydrogenases	Methanophenazine_hydrogenase
Methanophenazine hydrogenase small subunit precursor (EC 1.12.98.3)	Hydrogenases	Methanophenazine_hydrogenase
Methenyltetrahydrofolate cyclohydrolase	Acetyl-CoA_pathway_of_CO2_fixation
Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	One-carbon_metabolism_by_tetrahydropterines	Serine-glyoxylate_cycle
Methicillin resistance regulatory sensor-transducer MecR1	BlaR1_Family_Regulatory_Sensor-transducer_Disambiguation	Methicillin_resistance_in_Staphylococci
Methicillin resistance regulatory sensor-transducer MecR1, truncated	Methicillin_resistance_in_Staphylococci
Methicillin resistance repressor MecI	BlaR1_Family_Regulatory_Sensor-transducer_Disambiguation	Methicillin_resistance_in_Staphylococci
Methionine ABC transporter ATP-binding protein	Methionine_Degradation	Methionine_Biosynthesis
Methionine ABC transporter permease protein	Methionine_Degradation	Methionine_Biosynthesis
Methionine ABC transporter substrate-binding protein	Staphylococcal_pathogenicity_islands_SaPI	Methionine_Degradation	Methionine_Biosynthesis
Methionine aminopeptidase (EC 3.4.11.18)	Translation_factors_bacterial	CBSS-312309.3.peg.1965
Methionine gamma-lyase (EC 4.4.1.11)	Methionine_Degradation
Methionine repressor MetJ	Methionine_Biosynthesis
Methionine synthase activation domain (EC 2.1.1.13)	Methionine_Biosynthesis
Methionine transporter MetT	Methionine_Degradation	Methionine_Biosynthesis
Methionyl-tRNA formyltransferase (EC 2.1.2.9)	CBSS-89187.3.peg.2957	Folate_Biosynthesis	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Translation_factors_bacterial
Methionyl-tRNA synthetase (EC 6.1.1.10)	tRNA_aminoacylation
Methionyl-tRNA synthetase (EC 6.1.1.10), mitochondrial	tRNA_aminoacylation,_mitochondrial
Methoxyneurosporene dehydrogenase (EC 1.14.99.-)	Carotenoids
Methyl-accepting chemotaxis protein, hemolysin secretion protein HylB	Cytolysin_and_Lipase_operon_in_Vibrio
Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein)	Bacterial_Chemotaxis
Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein)	Bacterial_Chemotaxis
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)	Bacterial_Chemotaxis
Methyl-accepting chemotaxis protein IV (dipeptide chemoreceptor protein)	Bacterial_Chemotaxis
Methylamine dehydrogenase heavy chain precursor (EC 1.4.99.3)	Respiratory_dehydrogenases_1	CBSS-265072.7.peg.546
Methylamine dehydrogenase light chain precursor (EC 1.4.99.3)	Respiratory_dehydrogenases_1	CBSS-265072.7.peg.546
Methylamine operon regulatory protein	CBSS-265072.7.peg.546
Methylamine utilization protein MauD	CBSS-265072.7.peg.546
Methylamine utilization protein MauE	CBSS-265072.7.peg.546
Methylase of polypeptide chain release factors	Experimental_tye	A_Gammaproteobacteria_Cluster_Relating_to_Translation
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	DNA_repair,_bacterial	CBSS-393124.3.peg.2657
Methylcobalamin:coenzyme M methyltransferase, methanol-specific	Methanogenesis_from_methylated_compounds
Methylcobalamin:coenzyme M methyltransferase, methylamine-specific	Methanogenesis_from_methylated_compounds
Methyl coenzyme M reductase alpha subunit (EC 2.8.4.1)	Methanogenesis
Methyl coenzyme M reductase associated protein	Methanogenesis
Methyl coenzyme M reductase beta subunit (EC 2.8.4.1)	Methanogenesis
Methyl coenzyme M reductase gamma subunit (EC 2.8.4.1)	Methanogenesis
Methyl coenzyme M reductase I alpha subunit (EC 2.8.4.1)	Methanogenesis
Methyl coenzyme M reductase I beta subunit (EC 2.8.4.1)	Methanogenesis
Methyl coenzyme M reductase I gamma subunit (EC 2.8.4.1)	Methanogenesis
Methyl coenzyme M reductase II alpha subunit (EC 2.8.4.1)	Methanogenesis
Methyl coenzyme M reductase II beta subunit (EC 2.8.4.1)	Methanogenesis
Methyl coenzyme M reductase II gamma subunit (EC 2.8.4.1)	Methanogenesis
Methyl coenzyme M reductase operon protein C	Methanogenesis
Methyl coenzyme M reductase operon protein D	Methanogenesis
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	Branched_chain_amino_acid_degradation_regulons	HMG_CoA_Synthesis	Serine-glyoxylate_cycle	Leucine_Degradation_and_HMG-CoA_Metabolism
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	Branched_chain_amino_acid_degradation_regulons	HMG_CoA_Synthesis	Serine-glyoxylate_cycle	Leucine_Degradation_and_HMG-CoA_Metabolism
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	DNA_repair,_bacterial
Methylenetetrahydrofolate dehydrogenase	Acetyl-CoA_pathway_of_CO2_fixation
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	One-carbon_metabolism_by_tetrahydropterines	Folate_Biosynthesis	Serine-glyoxylate_cycle
Methylene tetrahydromethanopterin dehydrogenase (EC 1.5.99.9)	One-carbon_metabolism_by_tetrahydropterines	Serine-glyoxylate_cycle
Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	Benzoate_transport_and_degradation_cluster	Branched_chain_amino_acid_degradation_regulons	HMG_CoA_Synthesis	Leucine_Degradation_and_HMG-CoA_Metabolism
Methylglyoxal synthase (EC 4.2.3.3)	Methylglyoxal_Metabolism	CBSS-83333.1.peg.946	Glutathione:_Non-redox_reactions	CBSS-280355.3.peg.2835
Methylisocitrate lyase (EC 4.1.3.30)	Methylcitrate_cycle	Propionate-CoA_to_Succinate_Module
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)	Inositol_catabolism	Branched_chain_amino_acid_degradation_regulons	Valine_degradation	Isobutyryl-CoA_to_Propionyl-CoA_Module
Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)	Inositol_catabolism
Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Propionyl-CoA_to_Succinyl-CoA_Module
Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Propionyl-CoA_to_Succinyl-CoA_Module
Methylmalonyl-CoA decarboxylase, gamma chain (EC 4.1.1.41)	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Methylmalonyl-CoA epimerase (EC 5.1.99.1)	Propionyl-CoA_to_Succinyl-CoA_Module
Methylmalonyl-CoA mutase (EC 5.4.99.2)	Serine-glyoxylate_cycle	Propionyl-CoA_to_Succinyl-CoA_Module
Methylmalonyl-CoA:Pyruvate transcarboxylase 12S subunit (EC 2.1.3.1)	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit (EC 2.1.3.1)	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes
Methylthioadenosine deaminase	tRNA_modification_Archaea
Methylthiol:coenzyme M methyltransferase	Methanogenesis_from_methylated_compounds
Methylthiol:coenzyme M methyltransferase corrinoid protein	Methanogenesis_from_methylated_compounds
Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)	Methionine_Salvage
Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)	Methionine_Salvage
Methyltransferase, anthrose biosynthesis	Anthrose_Biosynthesis
Methyltransferase (EC 2.1.1.-) colocalized with Q	Experimental_tye
Methyltransferase, FkbM family protein	Capsular_heptose_biosynthesis
Mevalonate kinase (EC 2.7.1.36)	Archaeal_lipids	Isoprenoid_Biosynthesis	Mevalonate_Branch_of_Isoprenoid_Biosynthesis
MFS family multidrug transport protein, bicyclomycin resistance protein	CBSS-584.1.peg.841
MFS permease protein	Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria
MFS superfamily export protein YceL	ZZ_gjo_need_homes
MG(2+) CHELATASE FAMILY PROTEIN	CBSS-203122.12.peg.188	Experimental_tye
Mg(2+) Citrate transporter (TC 2.A.11.1.1)	Citrate_Metabolism,_Transport,_and_Regulation
Mga-associated protein	Streptococcal_Mga_Regulon
Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator	Lactose_and_Galactose_Uptake_and_Utilization
Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic) (EC 1.14.13.81)	Chlorophyll_Biosynthesis
Mg-protoporphyrin IX monomethyl ester oxidative cyclase (anaerobic) (EC 1.14.13.81)	Chlorophyll_Biosynthesis
Mg-protoporphyrin O-methyltransferase (EC 2.1.1.11)	Chlorophyll_Biosynthesis
Mhp operon transcriptional activator	Cinnamic_Acid_Degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
MiaB family protein, possibly involved in tRNA or rRNA modification	Heat_shock_dnaK_gene_cluster_extended	Methylthiotransferases	Ribosomal_protein_S12p_Asp_methylthiotransferase
Microbial collagenase, secreted (EC 3.4.24.3)	Proline,_4-hydroxyproline_uptake_and_utilization
Microsomal dipeptidase (EC 3.4.13.19)	Pyrroloquinoline_Quinone_biosynthesis
Minor capsid protein [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Minor curlin subunit CsgB, nucleation component of curlin monomers	Curli_production
Minor myo-inositol transporter IolF	Inositol_catabolism
Minor pilin of type IV secretion complex (VirB5)	Type_4_secretion_and_conjugative_transfer
Minor pilin of type IV secretion complex, VirB5	Plasmid-encoded_T-DNA_transfer
Minor teichoic acid biosynthesis protein GgaA	Teichoic_and_lipoteichoic_acids_biosynthesis
Minor teichoic acid biosynthesis protein GgaB	Teichoic_and_lipoteichoic_acids_biosynthesis
Mitochondrial folate transporter/carrier	Folate_Biosynthesis
Mitochondrial processing peptidase-like protein (EC 3.4.24.64)	ZZ_gjo_need_homes
Mitogenic factor 2	Prophage-encoded_Exotoxins	Streptococcus_pyogenes_Virulome
Mitogenic factor 3	Prophage-encoded_Exotoxins	Streptococcus_pyogenes_Virulome
Mitogenic factor 4	Prophage-encoded_Exotoxins	Streptococcus_pyogenes_Virulome
MJ0209 homolog	Archaeal_lipids
Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon	Maltose_and_Maltodextrin_Utilization
Mll7752 protein	CBSS-176299.4.peg.1292
Mll9366 protein	CBSS-203122.12.peg.188
Mlr0777 protein	CBSS-235.1.peg.567
Mlr0789 protein	CBSS-235.1.peg.567
Mlr7403 protein	CBSS-290633.1.peg.1906
MltA-interacting protein MipA	Unknown_carbohydrate_utilization_(_cluster_Ydj_)
Mo/Fe-nitrogenase-specific transcriptional regulator NifA	Nitrogen_fixation
Molybdate-binding domain of ModE	Transport_of_Molybdenum
Molybdenum ABC transporter, periplasmic molybdenum-binding protein modA (TC 3.A.1.8.1)	ABC_transporter_tungstate_(TC_3.A.1.6.2)	Transport_of_Molybdenum	ABC_transporter_molybdenum_(TC_3.A.1.8.1)
Molybdenum cofactor biosynthesis protein A	YgfZ	Molybdopterin_biosynthesis
Molybdenum cofactor biosynthesis protein B	Molybdopterin_biosynthesis
Molybdenum cofactor biosynthesis protein C	Molybdopterin_biosynthesis
Molybdenum cofactor biosynthesis protein D	Molybdopterin_biosynthesis
Molybdenum cofactor biosynthesis protein E	Molybdopterin_biosynthesis
Molybdenum transport ATP-binding protein modC (TC 3.A.1.8.1)	ABC_transporter_tungstate_(TC_3.A.1.6.2)	Transport_of_Molybdenum	ABC_transporter_molybdenum_(TC_3.A.1.8.1)
Molybdenum transport protein, putative	CBSS-269799.3.peg.2220
Molybdenum transport system permease protein modB (TC 3.A.1.8.1)	ABC_transporter_tungstate_(TC_3.A.1.6.2)	Transport_of_Molybdenum	ABC_transporter_molybdenum_(TC_3.A.1.8.1)
Molybdopterin biosynthesis mog protein	ZZ_gjo_need_homes
Molybdopterin biosynthesis protein A	Molybdopterin_biosynthesis
Molybdopterin biosynthesis protein B	Molybdopterin_biosynthesis
Molybdopterin-guanine dinucleotide biosynthesis protein A	Molybdopterin_biosynthesis
Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin_biosynthesis
Molybdopterin oxidoreductase (EC 1.2.7.-)	CBSS-269799.3.peg.2220
Molybdopterin oxidoreductase, iron-sulfur binding subunit (EC 1.2.7.-)	CBSS-269799.3.peg.2220
Molybdopterin oxidoreductase subunit, predicted	CBSS-269799.3.peg.2220
monoacylglycerol O-acyltransferase 1 (EC 2.3.1.22)	Triacylglycerol_metabolism
Monoamine oxidase (1.4.3.4)	Auxin_biosynthesis	Glycine_and_Serine_Utilization	Aromatic_Amin_Catabolism	Threonine_degradation
Monoamine/putrescine oxidase (EC 1.4.3.10)	Putrescine_utilization_pathways
Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	Peptidoglycan_Biosynthesis	CBSS-176280.1.peg.1561	Peptidoglycan_Biosynthesis_2
Monogalactosyldiacylglycerol synthase (EC 2.4.1.46)	Teichoic_and_lipoteichoic_acids_biosynthesis
Monogalactosyldiacylglycerol synthase precursor	Teichoic_and_lipoteichoic_acids_biosynthesis
Monoglyceride lipase (EC 3.1.1.23)	Triacylglycerol_metabolism	Cannabinoid_biosynthesis
Monomethylamine:corrinoid methyltransferase	Methanogenesis_from_methylated_compounds
Monomethylamine methyltransferase corrinoid protein	Methanogenesis_from_methylated_compounds
Monomethylamine permease	Methanogenesis_from_methylated_compounds
MotA/TolQ/ExbB proton channel family protein	Ton_and_Tol_transport_systems
MotA/TolQ/ExbB proton channel family protein, probably associated with flagella	CBSS-323098.3.peg.2823
Motility accessory factor	Motility_of_Campylobacter
Motility integral membrane protein	Motility_of_Campylobacter
MoxR-like ATPase in aerotolerance operon	CBSS-345072.3.peg.1318
M protein trans-acting positive regulator (Mga)	Streptococcus_pyogenes_virulence_regulators	Streptococcal_Mga_Regulon
MreB-like protein (Mbl protein)	Sporulation-related_Hypotheticals	Bacterial_Cytoskeleton
MSHA biogenesis protein MshE	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshF	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshF2	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshG	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshH	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshI	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshJ	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshK	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshK2	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshK3	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshL	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshM	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshN	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshO	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshP	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA biogenesis protein MshQ	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA pilin protein MshA	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA pilin protein MshB	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA pilin protein MshC	Mannose-sensitive_hemagglutinin_type_4_pilus
MSHA pilin protein MshD	Mannose-sensitive_hemagglutinin_type_4_pilus
MSM (multiple sugar metabolism) operon regulatory protein	Fructooligosaccharides(FOS)_and_Raffinose_Utilization
Mucin-desulfating sulfatase MdsA precursor (EC 3.1.6.14)	Sulfatases_and_sulfatase_modifying_factor_1
Muconate cycloisomerase (EC 5.5.1.1)	Benzoate_catabolism	Catechol_branch_of_beta-ketoadipate_pathway	Chlorobenzoate_degradation	Benzoate_degradation	Muconate_lactonizing_enzyme_family
Muconolactone isomerase (EC 5.3.3.4)	Benzoate_catabolism	Catechol_branch_of_beta-ketoadipate_pathway	Benzoate_degradation
Muconolactone isomerase (EC 5.3.3.4),putative	Catechol_branch_of_beta-ketoadipate_pathway
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	Multidrug_Resistance_Efflux_Pumps
Multicopper oxidase	Copper_homeostasis
Multidrug efflux membrane fusion protein MexC	MexC-MexD-OprJ_Multidrug_Efflux_System
Multidrug efflux pump component MtrF	Multidrug_Resistance_Efflux_Pumps
Multidrug efflux RND membrane fusion protein MexC	Multidrug_Resistance_Efflux_Pumps
Multidrug efflux RND transporter MexD	Multidrug_Resistance_Efflux_Pumps
Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1)	Multidrug_Resistance_Efflux_Pumps
Multidrug efflux transporter MdtP	Multidrug_Resistance_Operon_mdtRP_of_Bacillus
Multidrug efflux transporter MexD	MexC-MexD-OprJ_Multidrug_Efflux_System
Multidrug resistance protein [function not yet clear]	Multidrug_Resistance,_2-protein_version_Found_in_Gram-positive_bacteria
Multidrug resistance transporter, Bcr/CflA family	Copper_homeostasis
Multidrug transporter MdtB	The_mdtABCD_multidrug_resistance_cluster
Multidrug transporter MdtC	The_mdtABCD_multidrug_resistance_cluster
Multidrug transporter MdtD	The_mdtABCD_multidrug_resistance_cluster
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	Type_IV_pilus	Peptidoglycan_Biosynthesis	CBSS-316273.3.peg.227	Peptidoglycan_Biosynthesis_2
Multiple antibiotic resistance protein MarA	Multiple_Antibiotic_Resistance_MAR_locus
Multiple antibiotic resistance protein MarB	Multiple_Antibiotic_Resistance_MAR_locus
Multiple antibiotic resistance protein MarC	Multiple_Antibiotic_Resistance_MAR_locus
Multiple antibiotic resistance protein MarR	Multiple_Antibiotic_Resistance_MAR_locus
Multiple polyol-specific dehydrogenase (EC 1.1.1.-)	Ribitol,_Xylitol,_Arabitol,_Mannitol_and_Sorbitol_utilization	Mannitol_Utilization
Multiple sugar ABC transporter, ATP-binding protein	Maltose_and_Maltodextrin_Utilization	Fructooligosaccharides(FOS)_and_Raffinose_Utilization
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF	Fructooligosaccharides(FOS)_and_Raffinose_Utilization
Multiple sugar ABC transporter, membrane-spanning permease protein MsmG	Fructooligosaccharides(FOS)_and_Raffinose_Utilization
Multiple sugar ABC transporter, substrate-binding protein	Fructooligosaccharides(FOS)_and_Raffinose_Utilization
Multiple sugar metabolism regulator	Streptococcus_pyogenes_virulence_regulators	Streptococcus_pyogenes_recombinatorial_zone
Multiple virulence factor regulator MvfR/PqsR	Quorum_sensing_regulation_in_Pseudomonas	Pseudomonas_quinolone_signal_PQS
Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)	Murein_Hydrolases	Recycling_of_Peptidoglycan_Amino_Acids
Murein-DD-endopeptidase (EC 3.4.99.-)	Peptidoglycan_Biosynthesis	Peptidoglycan_Biosynthesis_2
Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	CBSS-562.2.peg.633	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
MutS domain protein, family 2	DNA_repair,_bacterial_MutL-MutS_system
MutS-related protein, family 1	DNA_repair,_bacterial_MutL-MutS_system
MxiG protein	CBSS-243265.1.peg.3592
MxiH protein	CBSS-243265.1.peg.3592
MxiK protein	CBSS-243265.1.peg.3592
MxiN	CBSS-243265.1.peg.3592
Mycothiol S-conjugate amidase Mca	Glutathione_analogs:_mycothiol
Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)	Inositol_catabolism
Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18)	Inositol_catabolism
Myo-inositol 2-dehydrogenase (EC 1.1.1.18)	Inositol_catabolism
N-(3-hydroxybutanoyl)-L- homoserine lactone synthase LuxM	Quorum-sensing_in_Vibrio
N-3-oxohexanoyl-L-homoserine lactone quorum-sensing transcriptional activator	Quorum_sensing_in_Yersinia
N-3-oxohexanoyl-L-homoserine lactone synthase	Quorum_sensing_in_Yersinia
N-3-oxooctanoyl-L-homoserine lactone synthase	Quorum_sensing_in_Yersinia
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A (EC 2.1.1.86)	Methanogenesis
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit B (EC 2.1.1.86)	Methanogenesis
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C (EC 2.1.1.86)	Methanogenesis
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D (EC 2.1.1.86)	Methanogenesis
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit E (EC 2.1.1.86)	Methanogenesis
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit F (EC 2.1.1.86)	Methanogenesis
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G (EC 2.1.1.86)	Methanogenesis
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H (EC 2.1.1.86)	Methanogenesis
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit X	Methanogenesis
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27)	Methanogenesis	One-carbon_metabolism_by_tetrahydropterines	Serine-glyoxylate_cycle
N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB	Glutathione_analogs:_mycothiol
N-Acetyl-D-galactosamine permease, possible	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
N-Acetyl-D-glucosamine ABC transport system ATP-binding protein	Chitin_and_N-acetylglucosamine_utilization
N-Acetyl-D-glucosamine ABC transport system, permease protein 1	Chitin_and_N-acetylglucosamine_utilization
N-Acetyl-D-glucosamine ABC transport system, permease protein 2	Chitin_and_N-acetylglucosamine_utilization
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein	Chitin_and_N-acetylglucosamine_utilization
N-Acetyl-D-glucosamine permease 2, possible	Chitin_and_N-acetylglucosamine_utilization
N-Acetyl-D-glucosamine permease, possible	Chitin_and_N-acetylglucosamine_utilization
N-Acetyl-D-glucosamine utilization related protein, possible	Chitin_and_N-acetylglucosamine_utilization
N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
N-acetylgalactosamine-6-phosphate deacetylase, predicted alternative (EC 3.5.1.25)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
N-acetylgalactosamine 6-sulfate sulfatase (GALNS)	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex	Sulfatases_and_sulfatase_modifying_factor_1	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
N-acetyl-gamma-aminoadipyl-phosphate reductase (EC 1.2.1.-)	Lysine_biosynthesis_AAA_pathway_2
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Arginine_Biosynthesis_extended	Arginine_Biosynthesis
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Peptidoglycan_Biosynthesis	Sialic_Acid_Metabolism	Peptidoglycan_Biosynthesis_2
N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic (EC 2.7.7.23)	UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Peptidoglycan_Biosynthesis	Peptidoglycan_Biosynthesis_2
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Chitin_and_N-acetylglucosamine_utilization	Sugar_utilization_in_Thermotogales	Sialic_Acid_Metabolism
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family	Chitin_and_N-acetylglucosamine_utilization
N-acetylglucosamine regulated methyl-accepting chemotaxis protein	Chitin_and_N-acetylglucosamine_utilization
N-acetylglucosamine-regulated outer membrane porin	Chitin_and_N-acetylglucosamine_utilization
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor	Chitin_and_N-acetylglucosamine_utilization	Ton_and_Tol_transport_systems
N-acetylglutamate synthase (EC 2.3.1.1)	Arginine_Biosynthesis_extended	Arginine_Biosynthesis
N-acetylhexosamine 1-kinase	Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway
N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-)	Lysine_Biosynthesis_DAP_Pathway
N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	Lysine_Biosynthesis_DAP_Pathway
N-acetyl-lysine aminotransferase (EC 2.6.1.-)	Lysine_biosynthesis_AAA_pathway_2
N-acetyl-lysine deacetylase (EC 3.5.1.-)	Lysine_biosynthesis_AAA_pathway_2
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	Sugar_utilization_in_Thermotogales	Sialic_Acid_Metabolism
N-acetylmannosamine kinase (EC 2.7.1.60)	Sialic_Acid_Metabolism
N-acetylmannosaminyltransferase (EC 2.4.1.187)	Teichoic_and_lipoteichoic_acids_biosynthesis	Vibrio_Polysaccharide_(VPS)_Biosynthesis
N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	Sugar_utilization_in_Thermotogales	UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Recycling_of_Peptidoglycan_Amino_Sugars
N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	Zinc_regulated_enzymes	Murein_Hydrolases	Recycling_of_Peptidoglycan_Amino_Acids
N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD	Recycling_of_Peptidoglycan_Amino_Acids
N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43)	CMP-N-acetylneuraminate_Biosynthesis	Sialic_Acid_Metabolism
N-acetylneuraminate lyase (EC 4.1.3.3)	Sialic_Acid_Metabolism
N-acetylneuraminate synthase (EC 2.5.1.56)	CMP-N-acetylneuraminate_Biosynthesis	Sialic_Acid_Metabolism	Streptococcus_agalactiae_virulome
N-acetylneuraminic acid outer membrane channel protein NanC	Sialic_Acid_Metabolism
N-acetylornithine carbamoyltransferase (EC 2.1.3.9)	Arginine_Biosynthesis_extended
N-Acetyltransferase PseH involved in the biosynthesis of pseudaminic acid	Pseudaminic_Acid_Biosynthesis
Na(+)Citrate OH(-) antiporter	Citrate_Metabolism,_Transport,_and_Regulation
N-acylamino acid racemase	Muconate_lactonizing_enzyme_family
N-acylglucosamine 2-epimerase (EC 5.1.3.8)	Sialic_Acid_Metabolism
N-acyl-L-homoserine lactone synthetase LasI	Quorum_sensing_regulation_in_Pseudomonas	Pseudomonas_quinolone_signal_PQS	Acyl_Homoserine_Lactone_(AHL)_Autoinducer_Quorum_Sensing_
N-acyl-L-homoserine lactone synthetase RhlL	Rhamnolipids_in_Pseudomonas	Quorum_sensing_regulation_in_Pseudomonas	Acyl_Homoserine_Lactone_(AHL)_Autoinducer_Quorum_Sensing_
NAD-dependent deacetylase	Redox-dependent_regulation_of_nucleus_processes
NAD-dependent deacetylase (EC 3.5.1.-)	Redox-dependent_regulation_of_nucleus_processes
NAD-dependent deacetylase sirtuin 1 (EC 3.5.1.-)	Redox-dependent_regulation_of_nucleus_processes
NAD-dependent deacetylase sirtuin-2 (EC 3.5.1.-)	Redox-dependent_regulation_of_nucleus_processes
NAD-dependent deacetylase sirtuin-3 (EC 3.5.1.-)	Redox-dependent_regulation_of_nucleus_processes
NAD-dependent epimerase/dehydratase	CBSS-296591.1.peg.2330
NAD-dependent epimerase/dehydratase family protein	CBSS-296591.1.peg.2330
NAD-dependent formate dehydrogenase alpha subunit	Formate_hydrogenase
NAD-dependent formate dehydrogenase beta subunit	Formate_hydrogenase
NAD-dependent formate dehydrogenase delta subunit	Formate_hydrogenase
NAD-dependent formate dehydrogenase (EC 1.2.1.2)	Formate_hydrogenase
NAD-dependent formate dehydrogenase gamma subunit	Formate_hydrogenase
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Calvin-Benson_cycle	Redox-dependent_regulation_of_nucleus_processes	Glycolysis_and_Gluconeogenesis	Pyridoxin_(Vitamin_B6)_Biosynthesis	Entner-Doudoroff_Pathway	Glutaredoxins
NAD-dependent malic enzyme (EC 1.1.1.38)	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
NAD-dependent protein deacetylase of SIR2 family	Protein_Acetylation_and_Deacetylation_in_Bacteria	NAD_and_NADP_cofactor_biosynthesis_global	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Redox-dependent_regulation_of_nucleus_processes	NAD_consumption
NAD+-dependent sorbitol dehydrogenase (EC 1.1.1.14)	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
NAD(FAD)-utilizing dehydrogenase, sll0175 homolog	CBSS-261591.3.peg.3916
NADH dehydrogenase (EC 1.6.99.3)	Respiratory_dehydrogenases_1	Carboxysome
NADH dehydrogenase (EC 1.6.99.3) in cluster with putative pheromone precursor	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
NADH dehydrogenase I subunit 4, Involved in photosystem-1 cyclic electron flow	Respiratory_Complex_I
NADH dehydrogenase I subunit 5, Involved in photosystem-1 cyclic electron flow	Respiratory_Complex_I
NADH dehydrogenase subunit 1	Respiratory_Complex_I
NADH dehydrogenase subunit 2	Respiratory_Complex_I
NADH dehydrogenase subunit 3	Respiratory_Complex_I
NADH dehydrogenase subunit 4 (EC:1.6.99.3)	Respiratory_Complex_I
NADH dehydrogenase subunit 4, Involved in CO2 fixation	CO2_uptake,_carboxysome
NADH dehydrogenase subunit 4L	Respiratory_Complex_I
NADH dehydrogenase subunit 5	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex	Respiratory_Complex_I
NADH dehydrogenase, subunit 5	Respiratory_Complex_I
NADH dehydrogenase subunit 5, Involved in CO2 fixation	CO2_uptake,_carboxysome
NADH dehydrogenase subunit 6	Respiratory_Complex_I
NADH-dependent butanol dehydrogenase A (EC 1.1.1.-)	Butanol_Biosynthesis	Acetone_Butanol_Ethanol_Synthesis
NADH-dependent butanol dehydrogenase B (EC 1.1.1.-)	Butanol_Biosynthesis	Acetone_Butanol_Ethanol_Synthesis
NADH oxidoreductase hcr (EC 1.-.-.-)	Nitrosative_stress
NADH peroxidase (EC 1.11.1.1)	Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization
NADH pyrophosphatase (EC 3.6.1.22)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
NADH-quinone oxidoreductase chain F 2 (EC 1.6.99.5)	Respiratory_Complex_I
NADH-quinone oxidoreductase subunit 15 (EC 1.6.99.5)	Respiratory_Complex_I
NADH-reducing hydrogenase maturation factor	Hydrogenases
NADH:ubiquinone oxidoreductase 17.2 kD subunit	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3)	Respiratory_Complex_I
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)	CBSS-69014.3.peg.2094	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) homolog	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)	CBSS-69014.3.peg.2094	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)	YgfZ	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain G2 (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)	CBSS-69014.3.peg.2094	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)	Respiratory_Complex_I
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)	Respiratory_Complex_I
NAD-independent protein deacetylase AcuC	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate
NAD kinase (EC 2.7.1.23)	NAD_and_NADP_cofactor_biosynthesis_global	CBSS-222523.1.peg.1311
NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal (EC 1.2.1.59)	Calvin-Benson_cycle	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
NADP-dependent malic enzyme (EC 1.1.1.40)	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
NAD(P)H-dependent D-xylose reductase (EC 1.1.1.-)	Xylose_utilization
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)	Calvin-Benson_cycle	Redox-dependent_regulation_of_nucleus_processes	Glycolysis_and_Gluconeogenesis
NADPH-dependent methylglyoxal reductase (D-lactaldehyde dehydrogenase)	Methylglyoxal_Metabolism
NADPH-dependent mycothiol reductase Mtr	Glutathione_analogs:_mycothiol
NADPH dependent preQ0 reductase	tRNA_modification_Bacteria	Queuosine-Archaeosine_Biosynthesis	tRNA_modification_Archaea_Henri
NADPH dependent preQ0 reductase-like	Queuosine-Archaeosine_Biosynthesis
NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	Flavodoxin
NAD(P)H-quinone oxidoreductase chain 1	Respiratory_Complex_I
NAD(P)H-quinone oxidoreductase chain 5 (EC 1.6.5.2)	Respiratory_Complex_I
NAD(P)H-quinone oxidoreductase chain H (EC 1.6.5.2)	Respiratory_Complex_I
NAD(P)H-quinone oxidoreductase chain I (EC 1.6.5.2)	Respiratory_Complex_I
NAD(P)H-quinone oxidoreductase chain J (EC 1.6.5.2)	Respiratory_Complex_I
NAD(P)H-quinone oxidoreductase chain K (EC 1.6.5.2)	Respiratory_Complex_I
NAD(P)H-quinone oxidoreductase subunit 3 (EC 1.6.5.2)	Respiratory_Complex_I
NADP-reducing hydrogenase, subunit A	Hydrogenases
NADP-reducing hydrogenase, subunit B	Hydrogenases
NADP-reducing hydrogenase, subunit C	Hydrogenases
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	Proline,_4-hydroxyproline_uptake_and_utilization	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate_dehydrogenases	Proline_Synthesis	Arginine_and_Ornithine_Degradation
NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	NAD_and_NADP_cofactor_biosynthesis_global	Phosphate_metabolism
NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	NAD_and_NADP_cofactor_biosynthesis_global	Phosphate_metabolism
NAD-reducing hydrogenase hoxS alpha subunit (EC 1.12.1.2)	Hydrogenases
NAD-reducing hydrogenase hoxS gamma subunit (EC 1.12.1.2)	Hydrogenases
NAD-reducing hydrogenase subunit HoxE (EC 1.12.1.2)	Hydrogenases
NAD-reducing hydrogenase subunit HoxF (EC 1.12.1.2)	Hydrogenases
NAD-reducing hydrogenase subunit HoxH (EC 1.12.1.2)	Hydrogenases
NAD-reducing hydrogenase subunit HoxU (EC 1.12.1.2)	Hydrogenases
NAD-reducing hydrogenase subunit HoxY (EC 1.12.1.2)	Hydrogenases
NadR transcriptional regulator	NAD_and_NADP_cofactor_biosynthesis_global	NAD_regulation
NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate_dehydrogenases
NAD-specific glutamate dehydrogenase (EC 1.4.1.2), eukaryotic type	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate_dehydrogenases
NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large	Proline,_4-hydroxyproline_uptake_and_utilization
NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form	Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate_dehydrogenases
NAD synthetase (EC 6.3.1.5)	NAD_and_NADP_cofactor_biosynthesis_global	NAD_regulation
Na+/H+ antiporter NhaA type	Na(+)_H(+)_antiporter
Na+/H+ antiporter NhaD type	Na(+)_H(+)_antiporter
Na(+) H(+) antiporter subunit A	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit A (TC 2.A.63.1.3)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit B	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit B (TC 2.A.63.1.3)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit C	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit C (TC 2.A.63.1.2)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit C (TC 2.A.63.1.3)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit D	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit D (TC 2.A.63.1.3)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit E	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit E (TC 2.A.63.1.2)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit E (TC 2.A.63.1.3)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit F	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit F (TC 2.A.63.1.2)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit F (TC 2.A.63.1.3)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit G	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit G (TC 2.A.63.1.2)	Sodium_Hydrogen_Antiporter
Na(+) H(+) antiporter subunit G (TC 2.A.63.1.3)	Sodium_Hydrogen_Antiporter
Na+/H+-dicarboxylate symporters	Propionyl-CoA_to_Succinyl-CoA_Module
Nanos protein	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Naphthalene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component (EC 1.18.1.3)	Naphtalene_and_antracene_degradation
naphthalene dioxygenase ferredoxin	Naphtalene_and_antracene_degradation
naphthalene dioxygenase Fe-S protein large subunit	Naphtalene_and_antracene_degradation
naphthalene dioxygenase Fe-S protein small subunit	Naphtalene_and_antracene_degradation
Naphthoate synthase (EC 4.1.3.36)	Menaquinone_and_Phylloquinone_Biosynthesis
Na/Pi cotransporter II-related protein	Phosphate_metabolism
Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
NB glycoprotein, integral component of the membrane of influenza B virus	Galactosylceramide_and_Sulfatide_metabolism
N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)	Hydantoin_metabolism
N-carbamoylputrescine amidase (3.5.1.53)	Polyamine_Metabolism	Arginine_and_Ornithine_Degradation
Negative regulator of allantoin and glyoxylate utilization operons	Allantoin_Utilization
Negative regulator of beta-lactamase expression	Beta-lactamase
Negative regulator of flagellin synthesis	Flagellum
Negative regulator of flagellin synthesis flgM	Flagellum
Negative regulator of genetic competence MecA	Gram_Positive_Competence
Negative regulator of pheromone responce genes TraA/PrgX	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Negative transcriptional regulator	Streptococcus_pyogenes_virulence_regulators	Streptococcus_pyogenes_recombinatorial_zone
Negative transcriptional regulator-copper transport operon	Copper_homeostasis
Neopullulanase (EC 3.2.1.135)	Maltose_and_Maltodextrin_Utilization	Sugar_utilization_in_Thermotogales
Neuraminidase 4	Galactosylceramide_and_Sulfatide_metabolism
Neuraminidase (EC 3.2.1.8)	Galactosylceramide_and_Sulfatide_metabolism
Neuraminidase NanP	Galactosylceramide_and_Sulfatide_metabolism
Neurosporene desaturase (EC 1.-.-.-)	Carotenoids
N-formylglutamate deformylase (EC 3.5.1.68)	Histidine_Degradation
N-formylglutamate deformylase (EC 3.5.1.68) [alternative form]	Histidine_Degradation
NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	Dimethylarginine_metabolism
Niacin transporter in yeast, DAL5 family	NAD_and_NADP_cofactor_biosynthesis_global
Niacin transporter NiaP	NAD_and_NADP_cofactor_biosynthesis_global	NAD_regulation
Nicel/Cobalt-specific TonB-dependent outer membrane receptor	Transport_of_Nickel_and_Cobalt
Nickel ABC transporter, periplasmic nickel-binding protein nikA2 (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nickel-cobalt-cadmium resistance protein NccB	Cobalt-zinc-cadmium_resistance
Nickel-dependent hydrogenase, large subunit	Hydrogenases
Nickel-dependent hydrogenase, small subunit	Hydrogenases
Nickel responsive regulator NikR	Transport_of_Nickel_and_Cobalt
Nickel transport ATP-binding protein nikD2 (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nickel transport ATP-binding protein nikD (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nickel transport ATP-binding protein nikE2 (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nickel transport ATP-binding protein nikE (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nickel transporter UreH	Urea_decomposition	Transport_of_Nickel_and_Cobalt
Nickel transport system permease protein nikB2 (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nickel transport system permease protein nikB (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nickel transport system permease protein nikC2 (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nickel transport system permease protein nikC (TC 3.A.1.5.3)	ABC_transporter_nickel_(TC_3.A.1.5.3)	Transport_of_Nickel_and_Cobalt
Nicotinamidase (EC 3.5.1.19)	NAD_and_NADP_cofactor_biosynthesis_global	cAMP_signaling_in_bacteria	NAD_regulation	Redox-dependent_regulation_of_nucleus_processes
Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), eukaryotic PNAT family	NAD_and_NADP_cofactor_biosynthesis_global
Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1)	NAD_and_NADP_cofactor_biosynthesis_global	NAD_regulation
Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1)	NAD_and_NADP_cofactor_biosynthesis_global	NAD_regulation
Nicotinamide phosphoribosyltransferase (EC 2.4.2.12)	NAD_and_NADP_cofactor_biosynthesis_global	NAD_regulation
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	NAD_and_NADP_cofactor_biosynthesis_global	NAD_regulation	CBSS-1313.3.peg.391
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), eukaryotic PNAT family	NAD_and_NADP_cofactor_biosynthesis_global
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	Heme_and_Siroheme_Biosynthesis	Cobalamin_synthesis	Experimental_tye	Coenzyme_B12_biosynthesis
Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	NAD_and_NADP_cofactor_biosynthesis_global	NAD_regulation	Redox-dependent_regulation_of_nucleus_processes
Nicotine adenine dinucleotide glycohydrolase (NADGH) (EC 3.2.2.5)	SLO-NADGH_Locus	Streptococcus_pyogenes_Virulome
Ni/Fe-hydrogenase 2 B-type cytochrome subunit	Hydrogenases
[Ni/Fe] hydrogenase, group 1, large subunit	Hydrogenases
[Ni/Fe] hydrogenase, group 1, small subunit	Hydrogenases
Ni,Fe-hydrogenase I cytochrome b subunit	Hydrogenases	Membrane-bound_Ni,_Fe-hydrogenase
Ni,Fe-hydrogenase III large subunit	Hydrogenases
Ni,Fe-hydrogenase III small subunit	Hydrogenases
Ni,Fe-hydrogenase I large subunit	Hydrogenases
Ni,Fe-hydrogenase maturation factor	Hydrogenases
[NiFe] hydrogenase metallocenter assembly protein HybG	NiFe_hydrogenase_maturation
[NiFe] hydrogenase metallocenter assembly protein HypC	NiFe_hydrogenase_maturation
[NiFe] hydrogenase metallocenter assembly protein HypD	NiFe_hydrogenase_maturation
[NiFe] hydrogenase metallocenter assembly protein HypE	NiFe_hydrogenase_maturation
[NiFe] hydrogenase metallocenter assembly protein HypF	NiFe_hydrogenase_maturation
[NiFe] hydrogenase nickel incorporation-associated protein HypB	NiFe_hydrogenase_maturation
[NiFe] hydrogenase nickel incorporation HybF-like protein	NiFe_hydrogenase_maturation
[NiFe] hydrogenase nickel incorporation protein HybF	NiFe_hydrogenase_maturation
[NiFe] hydrogenase nickel incorporation protein HypA	NiFe_hydrogenase_maturation
NifS-like cysteine desulfurase DndA	DNA_phosphorothioation
NifX-associated protein	Nitrogen_fixation
NifZ protein	Nitrogen_fixation
Nitrate ABC transporter, ATP-binding protein	Nitrate_and_nitrite_ammonification
Nitrate ABC transporter, nitrate-binding protein	Nitrate_and_nitrite_ammonification
Nitrate ABC transporter, permease protein	Nitrate_and_nitrite_ammonification
Nitrate/nitrite response regulator protein	Nitrate_and_nitrite_ammonification
Nitrate/nitrite sensor protein (EC 2.7.3.-)	Nitrate_and_nitrite_ammonification
Nitrate/nitrite transporter	Nitrate_and_nitrite_ammonification
Nitrate reductase cytochrome c550-type subunit	Nitrate_and_nitrite_ammonification
Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit	trimethylamine_N-oxide_(TMAO)_reductase
Nitric oxide-dependent regulator DnrN or NorA	Flavohaemoglobin	Nitrosative_stress
Nitric oxide reductase activation protein NorD	Flavohaemoglobin	Denitrification
Nitric oxide reductase activation protein NorE	Denitrification
Nitric oxide reductase activation protein NorQ	Flavohaemoglobin	Denitrification
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent	Flavohaemoglobin	Nitrosative_stress	Denitrification
Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)	Flavohaemoglobin	Nitrosative_stress
Nitric-oxide reductase subunit B (EC 1.7.99.7)	Denitrification
Nitric-oxide reductase subunit C (EC 1.7.99.7)	Denitrification
Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family)	cAMP_signaling_in_bacteria	Denitrification
Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family)	Denitrification
Nitric oxide synthase oxygenase (EC 1.-.-.-)	Pterin_metabolism_3
Nitrilase 1 (EC 3.5.5.1)	Auxin_biosynthesis
Nitrilase 2 (EC 3.5.5.1)	Auxin_biosynthesis
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	CBSS-216591.1.peg.168
Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)	Aromatic_Amin_Catabolism
Nitrite reductase accessory protein NirV	Denitrification
Nitrite reductase associated c-type cytochorome NirN	Dissimilatory_nitrite_reductase
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	Nitrate_and_nitrite_ammonification
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Nitrate_and_nitrite_ammonification
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4)	Nitrate_and_nitrite_ammonification
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4)	Nitrate_and_nitrite_ammonification
Nitrite-sensitive transcriptional repressor NsrR	Flavohaemoglobin	Rrf2_family_transcriptional_regulators	Nitrosative_stress	Oxidative_stress
Nitrite transporter from formate/nitrite family	Nitrate_and_nitrite_ammonification
Nitrite transporter NirC	Nitrate_and_nitrite_ammonification
Nitrogenase (iron-iron) alpha chain (EC 1.18.6.1)	Nitrogen_fixation
Nitrogenase (iron-iron) beta chain (EC 1.18.6.1)	Nitrogen_fixation
Nitrogenase (iron-iron) delta chain (EC 1.18.6.1)	Nitrogen_fixation
Nitrogenase (iron-iron) iron protein (EC 1.18.6.1)	Nitrogen_fixation
Nitrogenase (iron-iron) transcriptional regulator	Nitrogen_fixation
Nitrogenase iron protein (EC 1.18.6.1)	Nitrogen_fixation
Nitrogenase molybdenum-cofactor synthesis protein NifE	Nitrogen_fixation
Nitrogenase molybdenum-cofactor synthesis protein NifN	Nitrogen_fixation
Nitrogenase molybdenum-cofactor synthesis protein NifX	Nitrogen_fixation
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Nitrogen_fixation
Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Nitrogen_fixation
Nitrogenase stabilizing/protective protein NifW	Nitrogen_fixation
Nitrogenase vanadium-cofactor synthesis protein VnfE	Nitrogen_fixation
Nitrogenase vanadium-cofactor synthesis protein VnfN	Nitrogen_fixation
Nitrogenase (vanadium-iron) alpha chain (EC 1.18.6.1)	Nitrogen_fixation
Nitrogenase (vanadium-iron) beta chain (EC 1.18.6.1)	Nitrogen_fixation
Nitrogenase (vanadium-iron) delta chain (EC 1.18.6.1)	Nitrogen_fixation
Nitrogen assimilation regulatory protein Nac	DNA-binding_regulatory_proteins,_strays
Nitrogen regulation protein NR(I)	Ammonia_assimilation
Nitrogen regulation protein NR(II) (EC 2.7.3.-)	Ammonia_assimilation
Nitrogen regulatory protein P-II	Flavohaemoglobin	Ammonia_assimilation
Nitrogen regulatory protein P-II, glnK	Ammonia_assimilation
Nitrogen-responsive response regulator NrrA	Heterocyst_formation_in_cyanobacteria
Nitrous-oxide reductase (EC 1.7.99.6)	Denitrification
Nitrous oxide reductase maturation periplasmic protein NosX	Flavohaemoglobin	Denitrification
Nitrous oxide reductase maturation protein NosD	Denitrification
Nitrous oxide reductase maturation protein NosF (ATPase)	Flavohaemoglobin	Denitrification
Nitrous oxide reductase maturation protein NosR	Denitrification
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL	Flavohaemoglobin	Denitrification
Nitrous oxide reductase maturation transmembrane protein NosY	Flavohaemoglobin	Denitrification
N-linked glycosylation glycosyltransferase PglG	N-linked_Glycosylation_in_Bacteria
NLP/P60 family protein	CBSS-393121.3.peg.2760
N-methylhydantoinase A (EC 3.5.2.14)	Hydantoin_metabolism	Creatine_and_Creatinine_Degradation
N-methylhydantoinase (ATP-hydrolyzing) (EC 3.5.2.14)	Hydantoin_metabolism	Creatine_and_Creatinine_Degradation
N-methylhydantoinase B (EC 3.5.2.14)	Hydantoin_metabolism	Creatine_and_Creatinine_Degradation
N-methyltransferase (EC 2.1.1.-)	Type_IV_pilus
NMN 5'-nucleotidase, extracellular (EC 3.1.3.5)	NAD_and_NADP_cofactor_biosynthesis_global
NMN phosphatase (EC 3.1.3.5)	NAD_and_NADP_cofactor_biosynthesis_global
NMN synthetase (EC 6.3.1.-)	NAD_and_NADP_cofactor_biosynthesis_global
NnrS protein involved in response to NO	Flavohaemoglobin	Nitrosative_stress	Oxidative_stress	Denitrification
Nondeblocking aminopeptidase YpdE (X-X-[^PR]- specific)	Protein_degradation
Non functional Dihydropteroate synthase 2	Folate_Biosynthesis
Nonheme iron-containing ferritin	Campylobacter_Iron_Metabolism
Non-imprinted in Prader-Willi/Angelman syndrome 1	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Non-imprinted in Prader-Willi/Angelman syndrome region protein 2 homolog	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NAD)	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)	Glycolysis_and_Gluconeogenesis	Entner-Doudoroff_Pathway
Non-ribosomal peptide synthetase modules, pyoverdine	Pyoverdine_biosynthesis_new
Non-ribosomal peptide synthetase modules, pyoverdine??	Pyoverdine_biosynthesis_new
Non-ribosomal peptide synthetase modules, siderophore biosynthesis	Iron_acquisition_in_Vibrio
Non-specific DNA-binding protein Dps	Oxidative_stress
nonspecific lipid-transfer protein (acethyl CoA synthetase)	Ketoisovalerate_oxidoreductase
Nopaline transporter ATP-binding protein NocP	Agrobacterium_opine_transport
Nopaline transporter periplasmic substrate-binding protein NocT	Agrobacterium_opine_transport
Nopaline transporter permease protein NocM	Agrobacterium_opine_transport
Nopaline transporter permease protein NocQ	Agrobacterium_opine_transport
Not a Proline racemase, nor 4-hydroxyproline epimerase [missing catalytic residues]	Proline,_4-hydroxyproline_uptake_and_utilization
novel N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)	Chitin_and_N-acetylglucosamine_utilization	Sugar_utilization_in_Thermotogales
Novel Xylose regulator from LacI family	Xylose_utilization
NPQTN cell wall anchored protein IsdC	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
NPQTN specific sortase B	Sortase	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
NrfC protein	Nitrate_and_nitrite_ammonification
NrfD protein	Nitrate_and_nitrite_ammonification
N-Ribosylnicotinamide phosphorylase (EC 2.4.2.1)	NAD_and_NADP_cofactor_biosynthesis_global
NRPS loading module Thr-PG-PG-Thr	Nonribosomal_peptide_synthetases_(NRPS)_in_Frankia_sp._Ccl3
NRPS module 2 PG-PG-Asn	Nonribosomal_peptide_synthetases_(NRPS)_in_Frankia_sp._Ccl3
NRPS module 3 PG-PG	Nonribosomal_peptide_synthetases_(NRPS)_in_Frankia_sp._Ccl3
NRPS module 4 PG-Ser-Gly-Thr	Nonribosomal_peptide_synthetases_(NRPS)_in_Frankia_sp._Ccl3
N-succinyl arginine/lysine racemase	Muconate_lactonizing_enzyme_family
N-succinyldiaminopimelate aminotransferase (EC 2.6.1.17)	CBSS-196620.1.peg.2477
N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)	Lysine_Biosynthesis_DAP_Pathway
N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17)	Lysine_Biosynthesis_DAP_Pathway
N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	Arginine_Biosynthesis_extended	A_Glutathione-dependent_Thiol_Reductase_Assoiated_with_a_Step_in_Lysine_Biosynthesis	CBSS-584.1.peg.1352	Lysine_Biosynthesis_DAP_Pathway
NTD biosynthesis operon protein NtdA	Neotrehalosadiamine_(NTD)_Biosynthesis_Operon
NTD biosynthesis operon putative hydrolase NtdB (EC 3.-.-.-)	Neotrehalosadiamine_(NTD)_Biosynthesis_Operon
NTD biosynthesis operon putative oxidoreductase NtdC (EC 1.-.-.-)	Neotrehalosadiamine_(NTD)_Biosynthesis_Operon
NTD biosynthesis operon regulator NtdR	Neotrehalosadiamine_(NTD)_Biosynthesis_Operon
NTP pyrophosphohydrolases including oxidative damage repair enzymes	CBSS-216591.1.peg.168
Nuclear pore complex protein Nup88	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	Heme_and_Siroheme_Biosynthesis	Heat_shock_dnaK_gene_cluster_extended	Housecleaning_nucleoside_triphosphate_pyrophosphatases	CBSS-630.2.peg.3360
Nucleoside diphosphate kinase (EC 2.7.4.6)	pyrimidine_conversions	Purine_conversions
Nucleoside-diphosphate sugar epimerase/dehydratase	CBSS-296591.1.peg.2330
Nucleoside-diphosphate-sugar epimerases	CBSS-296591.1.peg.2330	CBSS-502800.3.peg.2785
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	Vibrio_Core_Oligosaccharide_Biosynthesis	Rhamnose_containing_glycans
Nucleoside permease NupC	Deoxyribose_and_Deoxynucleoside_Catabolism
Nucleoside triphosphate pyrophosphohydrolase MazG	Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Folate_Biosynthesis
Nucleotidase YfbR, HD superfamily	Housecleaning_nucleoside_triphosphate_pyrophosphatases
Nucleotide excision repair protein, with UvrB/UvrC motif	Proteolysis_in_bacteria,_ATP-dependent
Nucleotide pyrophosphatase (EC 3.6.1.9)	Purine_conversions
Nucleotide sugar epimerase	CBSS-296591.1.peg.2330
NudC domain containing protein 2	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
Nudix dNTPase DR0004 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR0092 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR0149 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR0261 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR0274 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR0329 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR0550 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR0784 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR1025 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR1776 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix dNTPase DR2356 (EC 3.6.1.-)	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix family (d)NDPase DR0975	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix hydrolase family protein PA3470	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix hydrolase family protein YffH	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
Nudix-like NDP and NTP phosphohydrolase YmfB	CBSS-354.1.peg.876	Nudix_proteins_(nucleoside_triphosphate_hydrolases)
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)	Sulfate_assimilation	Methionine_Biosynthesis
O-acetyltransferase, anthrose biosynthesis	Anthrose_Biosynthesis
O-antigen export system, ATP-binding protein	Perosamine_Synthesis_Vibrio
O-antigen export system, permease protein	Perosamine_Synthesis_Vibrio	Rhamnose_containing_glycans
O-antigen export system, polymerase or transferase	Perosamine_Synthesis_Vibrio
O-antigen flippase Wzx	Capsular_Polysaccharides_Biosynthesis_and_Assembly	KDO2-Lipid_A_biosynthesis
O-antigen ligase	Vibrio_Core_Oligosaccharide_Biosynthesis	LOS_core_oligosaccharide_biosynthesis
OB-fold nucleic acid binding domain protein COG1571	tRNA_modification_Archaea
Octaheme tetrathionate reductase	Tetrathionate_respiration
Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	Lipoic_acid_metabolism	Dehydrogenase_complexes
Octaprenyl-diphosphate synthase (EC 2.5.1.-)	Polyprenyl_Diphosphate_Biosynthesis	Proteorhodopsin
Oligo-1,6-glucosidase (EC 3.2.1.10)	Maltose_and_Maltodextrin_Utilization
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA (TC 3.A.1.5.1)	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	ABC_transporter_oligopeptide_(TC_3.A.1.5.1)
Oligopeptide transport ATP-binding protein oppD (TC 3.A.1.5.1)	ABC_transporter_oligopeptide_(TC_3.A.1.5.1)
Oligopeptide transport ATP-binding protein oppF (TC 3.A.1.5.1)	ABC_transporter_oligopeptide_(TC_3.A.1.5.1)
Oligopeptide transport system permease protein oppB (TC 3.A.1.5.1)	ABC_transporter_oligopeptide_(TC_3.A.1.5.1)
Oligopeptide transport system permease protein oppC (TC 3.A.1.5.1)	ABC_transporter_oligopeptide_(TC_3.A.1.5.1)
Oligoribonuclease (EC 3.1.-.-)	RNA_processing_and_degradation,_bacterial
Oligosaccharide repeat unit polymerase Wzy	CBSS-376686.6.peg.291	Capsular_Polysaccharides_Biosynthesis_and_Assembly	KDO2-Lipid_A_biosynthesis
Oligosaccharide translocase SypK	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Oligosaccharyltransferase PglB (EC 2.4.1.119)	N-linked_Glycosylation_in_Bacteria
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)	Pyruvate_Alanine_Serine_Interconversions	CBSS-258594.1.peg.3339	GABA_and_putrescine_metabolism_from_cluters
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial	Entner-Doudoroff_Pathway	Pentose_phosphate_pathway
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, cyanobacterial	Entner-Doudoroff_Pathway	Pentose_phosphate_pathway
OpgC protein	Synthesis_of_osmoregulated_periplasmic_glucans
O-phosphoseryl-tRNA(Cys) synthetase	tRNA_aminoacylation	Cysteinyl-tRNA(Cys)_synthesis,_archaeal
O-phosphoseryl-tRNA:Cysteinyl-tRNA synthase	Cysteinyl-tRNA(Cys)_synthesis,_archaeal
O-phosphoseryl-tRNA(Sec) selenium transferase	Selenocysteine_metabolism
Optional hypothetical component of the B12 transporter BtuM	Coenzyme_B12_biosynthesis
Optional hypothetical component of the B12 transporter BtuN	Coenzyme_B12_biosynthesis
Organic hydroperoxide resistance protein	CBSS-269482.1.peg.1294	Oxidative_stress
Organic hydroperoxide resistance transcriptional regulator	CBSS-269482.1.peg.1294	Oxidative_stress
Organic solvent tolerance protein precursor	EC49-61
Organomercurial lyase (EC 4.99.1.2)	Mercury_resistance_operon
Organosulfonate utilization protein SsuF	Alkanesulfonate_assimilation
OrgB protein, associated with InvC ATPase of type III secretion system	Type_III_secretion_system_orphans
Origin of replication recognition protein	DNA_replication,_archaeal
Ornithine aminotransferase (EC 2.6.1.13)	Proline,_4-hydroxyproline_uptake_and_utilization	Dimethylarginine_metabolism	Arginine_and_Ornithine_Degradation
Ornithine carbamoyltransferase (EC 2.1.3.3)	Arginine_Biosynthesis_extended	Arginine_Deiminase_Pathway	CBSS-320372.3.peg.6046	Arginine_Biosynthesis	Arginine_and_Ornithine_Degradation
Ornithine cyclodeaminase (EC 4.3.1.12)	Proline,_4-hydroxyproline_uptake_and_utilization	Arginine_and_Ornithine_Degradation	Threonine_degradation
Ornithine decarboxylase (EC 4.1.1.17)	Polyamine_Metabolism	Arginine_and_Ornithine_Degradation
Ornithine decarboxylase, inducible (EC 4.1.1.17)	Polyamine_Metabolism
Ornithine racemase (EC 5.1.1.12)	Anaerobic_Oxidative_Degradation_of_L-Ornithine
Orotate phosphoribosyltransferase (EC 2.4.2.10)	De_Novo_Pyrimidine_Synthesis	YgfZ
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	De_Novo_Pyrimidine_Synthesis
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB	Benzoate_degradation
Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA	Benzoate_degradation
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	Potassium_homeostasis
Osmotically activated L-carnitine ABC transporter, ATP binding protein, opuCA	Osmotically_activated_L-carnitine_ABC_transporter_in_Listeria
Osmotically activated L-carnitine ABC transporter, carnitine-binding protein, opuCC	Osmotically_activated_L-carnitine_ABC_transporter_in_Listeria
Osmotically activated L-carnitine ABC transporter, permease protein, opuCB	Osmotically_activated_L-carnitine_ABC_transporter_in_Listeria
Osmotically activated L-carnitine ABC transporter, permease protein, opuCD	Osmotically_activated_L-carnitine_ABC_transporter_in_Listeria
Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis
Osmotically inducible protein OsmY	Osmoregulation
O-succinylbenzoate-CoA synthase (EC 4.2.1.-)	Menaquinone_and_Phylloquinone_Biosynthesis	Muconate_lactonizing_enzyme_family
O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	Menaquinone_and_Phylloquinone_Biosynthesis
O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	Methionine_Biosynthesis
Outer membrane and periplasm component of type IV secretion of T-DNA complex, has secretin-like domain, VirB9	Plasmid-encoded_T-DNA_transfer
Outer membrane chaperone Skp (OmpH) precursor	Lipopolysaccharide_assembly
Outer membrane component of tripartite multidrug resistance system	Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria
Outer membrane ferripyoverdine receptor	Pyoverdine_biosynthesis_new	Ton_and_Tol_transport_systems
Outer membrane ferripyoverdine receptor FpvA, TonB-dependent	Pyoverdine_biosynthesis_new
Outer membrane ferripyoverdine receptor FpvB, for Type I pyoverdine	Pyoverdine_biosynthesis_new
Outer membrane fibronectin-binding protein	Adhesion_of_Campylobacter
Outer membrane lipoprotein carrier protein LolA	Lipoprotein_sorting_system	Lipopolysaccharide_assembly
Outer membrane lipoprotein LolB precursor	A_Gammaproteobacteria_Cluster_Relating_to_Translation	Lipoprotein_sorting_system	Lipopolysaccharide_assembly
Outer membrane lipoprotein omp16 precursor	Ton_and_Tol_transport_systems
Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex	Lipopolysaccharide_assembly
Outer membrane porin, coexpressed with pyoverdine biosynthesis regulon	Pyoverdine_biosynthesis_new
Outer membrane porin, OprD family	Lysine_degradation
Outer membrane porin protein NmpC precursor	Uptake_of_selenate_and_selenite
outer membrane protein AlgE	Alginate_metabolism
Outer membrane protein A precursor	Osmoregulation	Major_Outer_Membrane_Proteins	Outer_membrane
Outer membrane protein assembly factor YaeT precursor	Outer_membrane	Lipopolysaccharide_assembly
Outer membrane protein GumB, involved in the export of xanthan	Xanthan_Exopolysaccharide_Biosynthesis_and_Export
Outer membrane protein H precursor	Major_Outer_Membrane_Proteins	Outer_membrane	Periplasmic_Stress_Response
Outer membrane protein ImpK/VasF, OmpA/MotB domain	Type_VI_secretion_systems
Outer membrane protein Imp, required for envelope biogenesis	Lipopolysaccharide_assembly
Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL)	Lipopolysaccharide_assembly
Outer membrane protein OprJ	MexC-MexD-OprJ_Multidrug_Efflux_System
Outer membrane protein/protective antigen OMA87	CBSS-316057.3.peg.659	CBSS-251221.1.peg.1863
Outer membrane protein SusE	Cellulosome
Outer membrane protein SusF	Cellulosome
Outer membrane protein SypB	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB)	CBSS-290633.1.peg.1906	Lipopolysaccharide_assembly
Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB)-like	CBSS-290633.1.peg.1906
Outer membrane pyoverdine eflux protein	Pyoverdine_biosynthesis_new
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid	Ton_and_Tol_transport_systems
Outer membrane receptor for ferric-pyochelin FptA	Siderophore_pyochelin
Outer membrane receptor proteins, mostly Fe transport	Hemin_transport_system
Outer Membrane Siderophore Receptor IroN	Salmochelin-mediated_Iron_Acquisition
Outer membrane stress sensor protease DegQ, serine protease	Proteolysis_in_bacteria,_ATP-dependent	Periplasmic_Stress_Response
Outer membrane stress sensor protease DegS	Proteolysis_in_bacteria,_ATP-dependent	Periplasmic_Stress_Response
Outer membrane sugar transport protein YshA	O-antigen_capsule_important_for_environmental_persistence
Outer membrane usher protein SfmD	The_fimbrial_Sfm_cluster
Outer membrane vitamin B12 receptor BtuB	Coenzyme_B12_biosynthesis
Outer surface protein of unknown function, cellobiose operon	Beta-Glucoside_Metabolism
OxaI/YidC membrane insertion protein	CBSS-354.1.peg.1756
Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	Proline,_4-hydroxyproline_uptake_and_utilization	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	Proline,_4-hydroxyproline_uptake_and_utilization	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	Proline,_4-hydroxyproline_uptake_and_utilization	Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Oxalyl-CoA decarboxylase (EC 4.1.1.8)	Alkaloid_biosynthesis_from_L-lysine
Oxidoreductase ion channel	Staphylococcus_aureus_hypothetical_repetitive_gene_loci
Oxidoreductase probably involved in sulfite reduction	Inorganic_Sulfur_Assimilation
Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)	Capsular_Polysaccharides_Biosynthesis_and_Assembly	CBSS-291331.3.peg.3674
Oxidoreductase YihU	O-antigen_capsule_important_for_environmental_persistence
Oxidosqualene cyclase protein	Phytosterol_biosynthesis
Oxygen-regulated invasion protein OrgA	CBSS-243265.1.peg.3592
Oxygen-regulated invasion protein OrgB	CBSS-243265.1.peg.3592
Oxytetracycline resistance protein OtrA	Translation_elongation_factor_G_family	Tetracycline_resistance,_ribosome_protection_type
P32 subunit of splicing factor SF2	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
p53 inducible protein	eukaryotic_rRNA_modification_and_related_functions	Nucleolar_protein_complex
p53-regulating protein kinase (human PRPK/yeast YGR262c)	YgjD_and_YeaZ
PAB2272 methyltransferase homolog	Wyeosine-MimG_Biosynthesis	tRNA_modification_Archaea_Henri
Pantoate--beta-alanine ligase (EC 6.3.2.1)	Coenzyme_A_Biosynthesis	CBSS-280355.3.peg.2835
Panton-Valentine leukocidin chain F precursor	Staphylococcus_Two-component_and_Pore-forming_Cytolysins
Panton-Valentine leukocidin chain S precursor	Staphylococcus_Two-component_and_Pore-forming_Cytolysins
Pantothenate kinase archaeal, predicted (EC 2.7.1.33)	Coenzyme_A_Biosynthesis
Pantothenate kinase (EC 2.7.1.33)	Coenzyme_A_Biosynthesis
Pantothenate kinase type II, eukaryotic (EC 2.7.1.33)	Coenzyme_A_Biosynthesis
Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	Coenzyme_A_Biosynthesis
Pantothenate:Na+ symporter (TC 2.A.21.1.1)	Coenzyme_A_Biosynthesis
Pantothenate synthetase archaeal, ADP-forming	Coenzyme_A_Biosynthesis
Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	Tryptophan_synthesis	Folate_Biosynthesis	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	Tryptophan_synthesis	Folate_Biosynthesis	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
Para-amino-L-phenylalanine methyltransferase (EC 2.1.1.-)	Chorismate:_Intermediate_for_synthesis_of_PAPA_antibiotics,_PABA,_anthranilate,_3-hydroxyanthranilate_and_more.
Para-hydroxybenzoate--polyprenyltransferase, mitochondrial precursor (EC 2.5.1.-)	Ubiquinone_Biosynthesis
Paraquat-inducible protein A	Hemin_transport_system	CBSS-221988.1.peg.771	Oxidative_stress
Paraquat-inducible protein B	Hemin_transport_system	CBSS-221988.1.peg.771	Oxidative_stress
Paratox	Prophage_lysogenic_conversion_modules
ParD protein (antitoxin to ParE)	Toxin-antitoxin_systems_(other_than_RelBE_and_MazEF)
ParE toxin protein	Toxin-antitoxin_systems_(other_than_RelBE_and_MazEF)
Pca regulon regulatory protein PcaR	Protocatechuate_branch_of_beta-ketoadipate_pathway
p-cumate dioxygenase ferredoxin	p-cymene_degradation
p-cumate dioxygenase ferredoxin reductase subunit (CmtAa)	p-cymene_degradation
p-cumate dioxygenase large subunit (CmtAb)	p-cymene_degradation
p-cumate dioxygenase small subunit (CmtAc)	p-cymene_degradation
p-cumic alcohol dehydrogenase (CymB)	p-cymene_degradation
p-cumic aldehyde dehydrogenase (CymC) [EC:1.2.1.3]	p-cymene_degradation
p-cymene degradation operon transcriptional regulator	p-cymene_degradation
P-cymene methyl hydroxylase	p-cymene_degradation
p-cymene monooxygenase, hydroxylase subunit(CymAa)	p-cymene_degradation
P-cymene monooxygenase, reductase subunit(CymAb) (EC 1.17.1.-)	p-cymene_degradation
Pectin degradation protein KdgF	D-Galacturonate_Utilization	Alginate_metabolism	D-Galacturonate_and_D-Glucuronate_Utilization
Penicillin-binding protein 1A/1B (PBP1)	Control_of_cell_elongation_-_division_cycle_in_Bacilli	Methicillin_resistance_in_Staphylococci
Penicillin-binding protein 2B	CBSS-83331.1.peg.3039	CBSS-269801.1.peg.1725
Penicillin-binding protein 2 (PBP-2)	CBSS-83331.1.peg.3039	CBSS-269801.1.peg.1725	Peptidoglycan_Biosynthesis	Peptidoglycan_Biosynthesis_2
Penicillin-binding protein 3	CBSS-83331.1.peg.3039	CBSS-269801.1.peg.1725
Penicillin-binding protein 4 precursor	Peptidoglycan_Biosynthesis	Peptidoglycan_Biosynthesis_2
Penicillin-binding protein PBP2	Bacterial_Cytoskeleton
Penicillin-binding protein PBP2a, methicillin resistance determinant MecA, transpeptidase	BlaR1_Family_Regulatory_Sensor-transducer_Disambiguation	Peptidoglycan_Biosynthesis	Peptidoglycan_Biosynthesis_2	Methicillin_resistance_in_Staphylococci
Penicillin binding protein PBP4	Methicillin_resistance_in_Staphylococci
penicillin-binding protein, putative	CBSS-83331.1.peg.3039
Pentacyclic triterpene synthase	Phytosterol_biosynthesis
Peptidase B (EC 3.4.11.23)	Protein_degradation
Peptidase C14, caspase catalytic subunit p20	CBSS-316056.14.peg.880
Peptidase M14, carboxypeptidase A	CBSS-216591.1.peg.168
Peptidase M23B precursor	CBSS-224911.1.peg.435
Peptidase, M23/M37 family	CBSS-393121.3.peg.2760
Peptide chain release factor 1	LMPTP_YwlE_cluster	A_Gammaproteobacteria_Cluster_Relating_to_Translation	Translation_factors_bacterial	Glutaredoxins
Peptide chain release factor 2	Programmed_frameshift	CBSS-393121.3.peg.2760	Translation_factors_bacterial
Peptide chain release factor 2 unshifted fragment	Programmed_frameshift
Peptide chain release factor 3	Translation_factors_bacterial
Peptide chain release factor homolog	Translation_factors_bacterial
Peptide deformylase (EC 3.5.1.88)	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	CBSS-89187.3.peg.2957	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Translation_factors_bacterial	Dehydrogenase_complexes
Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	Cluster_Ytf_and_putative_sugar_transporter	Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide_methionine_sulfoxide_reductase
Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide_methionine_sulfoxide_reductase
Peptide methionine sulfoxide reductase regulator MsrR	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators
Peptide transport periplasmic protein sapA (TC 3.A.1.5.5)	ABC_transporter_peptide_(TC_3.A.1.5.5)
Peptide transport system ATP-binding protein sapD (TC 3.A.1.5.5)	ABC_transporter_peptide_(TC_3.A.1.5.5)
Peptide transport system ATP-binding protein sapF (TC 3.A.1.5.5)	ABC_transporter_peptide_(TC_3.A.1.5.5)
Peptide transport system permease protein sapB (TC 3.A.1.5.5)	ABC_transporter_peptide_(TC_3.A.1.5.5)
Peptide transport system permease protein sapC (TC 3.A.1.5.5)	ABC_transporter_peptide_(TC_3.A.1.5.5)
Peptidoglycan-associated lipoprotein precursor	Ton_and_Tol_transport_systems
peptidoglycan lytic protein P45	CBSS-393121.3.peg.2760
Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)	Polysaccharide_deacetylases
Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2)	Proline,_4-hydroxyproline_uptake_and_utilization
Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)	Peptidyl-prolyl_cis-trans_isomerase
Peptidyl-prolyl cis-trans isomerase ppiB (EC 5.2.1.8)	Peptidyl-prolyl_cis-trans_isomerase
Peptidyl-prolyl cis-trans isomerase ppiC (EC 5.2.1.8)	Peptidyl-prolyl_cis-trans_isomerase
Peptidyl-prolyl cis-trans isomerase ppiD (EC 5.2.1.8)	Peptidyl-prolyl_cis-trans_isomerase
Peptidyl-tRNA hydrolase, archaeal type (EC 3.1.1.29)	ZZ_gjo_need_homes	CBSS-281309.1.peg.50
Peptidyl-tRNA hydrolase (EC 3.1.1.29)	CBSS-281309.1.peg.50	Translation_factors_bacterial	Sporulation_gene_orphans
Per-activated serine protease autotransporter enterotoxin EspC	Lysozyme_inhibitors
Periplasmic alpha-amylase (EC 3.2.1.1)	Maltose_and_Maltodextrin_Utilization	Glycogen_metabolism
Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57)	Aminotransferases:Aromatic_Pathway_and_More,_A_work_in_progress	Phenylalanine_and_Tyrosine_Branches_from_Chorismate
Periplasmic beta-glucosidase (EC 3.2.1.21)	Beta-Glucoside_Metabolism
Periplasmic chorismate mutase I precursor (EC 5.4.99.5)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate_Synthesis
Periplasmic divalent cation tolerance protein cutA	Biogenesis_of_c-type_cytochromes	Copper_homeostasis:_copper_tolerance
Periplasmic esterase IroE	Salmochelin-mediated_Iron_Acquisition
Periplasmic [Fe] hydrogenase (EC 1.12.7.2)	Hydrogenases
Periplasmic [Fe] hydrogenase large subunit (EC 1.12.7.2)	Hydrogenases
Periplasmic [Fe] hydrogenase small subunit (EC 1.12.7.2)	Hydrogenases
periplasmic fructose-binding protein component of signal transduction system LevQ	Fructose_and_Mannose_Inducible_PTS
periplasmic fructose-binding protein component of signal transduction system LevT	Fructose_and_Mannose_Inducible_PTS
Periplasmic hemin-binding protein	Hemin_transport_system
Periplasmic lysozyme inhibitor of c-type lysozyme	Lysozyme_inhibitors
Periplasmic/membrane protein associated with DUF414	Experimental_tye
Periplasmic mercury(+2) binding protein	Mercury_resistance_operon
Periplasmic Murein Peptide-Binding Protein MppA	Recycling_of_Peptidoglycan_Amino_Acids
Periplasmic nitrate reductase component NapD	Nitrate_and_nitrite_ammonification
Periplasmic nitrate reductase component NapE	Nitrate_and_nitrite_ammonification
Periplasmic nitrate reductase component NapL	Nitrate_and_nitrite_ammonification
Periplasmic nitrate reductase precursor (EC 1.7.99.4)	Nitrate_and_nitrite_ammonification
Periplasmic protein p19 involved in high-affinity Fe2+ transport	Transport_of_Iron	Campylobacter_Iron_Metabolism
Periplasmic protein SypC involved in polysaccharide export	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Periplasmic protein torT precursor	trimethylamine_N-oxide_(TMAO)_reductase
Periplasmic protein YqjC	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein
Periplasmic thiol:disulfide interchange protein DsbA	Biogenesis_of_c-type_cytochromes	Periplasmic_disulfide_interchange
Periplasmic thiol:disulfide interchange protein, DsbA-like	Biogenesis_of_c-type_cytochromes	Periplasmic_disulfide_interchange
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	Biogenesis_of_c-type_cytochromes	Flavohaemoglobin	Glutathione_Redox_Metabolism_3	Periplasmic_disulfide_interchange
Permease of the drug/metabolite transporter (DMT) superfamily	Cobalt-zinc-cadmium_resistance	Queuosine-Archaeosine_Biosynthesis
Permease Ygh-P1, YjgP/YjgQ family	Conserved_cluster_around_inner_membrane_protein_gene_yghQ,_probably_involved_in_polysaccharide_biosynthesis
Permease Ygh-P2, YjgP/YjgQ family	Conserved_cluster_around_inner_membrane_protein_gene_yghQ,_probably_involved_in_polysaccharide_biosynthesis
Peroxidase/catalase HPI (EC 1.11.1.6)	Oxidative_stress
Peroxidase (EC 1.11.1.7)	Auxin_degradation	Regulation_of_Oxidative_Stress_Response	Oxidative_stress	Protection_from_Reactive_Oxygen_Species
Peroxidase precursor (EC 1.11.1.7)	Auxin_degradation	Lignine_biosynthesis	Suberine_biosynthesis
Peroxide stress regulator	Regulation_of_Oxidative_Stress_Response	Oxidative_stress	Campylobacter_Iron_Metabolism
Peroxide stress regulator PerR, FUR family	Oxidative_stress	Putative_hemin_transporter
Pertussis toxin subunit 1 precursor (NAD-dependent ADP-ribosyltransferase) (EC 2.4.2.-)	Pertussis_toxin
Pertussis toxin subunit 2 precursor (PTX S2)	Pertussis_toxin
Pertussis toxin subunit 3 precursor (PTX S3)	Pertussis_toxin
Pertussis toxin subunit 4 precursor (PTX S4)	Pertussis_toxin
Pertussis toxin subunit 5 precursor (PTX S5)	Pertussis_toxin
pH adaptation potassium efflux system a	pH_adaptation_potassium_efflux_system
pH adaptation potassium efflux system c	pH_adaptation_potassium_efflux_system
pH adaptation potassium efflux system d	pH_adaptation_potassium_efflux_system
pH adaptation potassium efflux system e	pH_adaptation_potassium_efflux_system
pH adaptation potassium efflux system f	pH_adaptation_potassium_efflux_system
pH adaptation potassium efflux system g	pH_adaptation_potassium_efflux_system
PH adaptation potassium efflux system protein B1	CBSS-272569.1.peg.3198
PH adaptation potassium efflux system protein B2	CBSS-272569.1.peg.3198
PH adaptation potassium efflux system protein C	CBSS-272569.1.peg.3198
PH adaptation potassium efflux system protein D 1	CBSS-272569.1.peg.3198
pH adaptation potassium efflux system protein D 2	CBSS-272569.1.peg.3198
pH adaptation potassium efflux system protein D 3	CBSS-272569.1.peg.3198
PH adaptation potassium efflux system protein E	CBSS-272569.1.peg.3198
PH adaptation potassium efflux system protein G	CBSS-272569.1.peg.3198
pH adaption potassium efflux system protein PhaD	pH_adaptation_potassium_efflux_system
pH adaption potassium efflux system protein PhaE	pH_adaptation_potassium_efflux_system
pH adaption potassium efflux system protein PhaF	pH_adaptation_potassium_efflux_system
pH adaption potassium efflux system protein PhaG	pH_adaptation_potassium_efflux_system
Phage-associated cell wall hydrolase	Bacterial_Endolysins:_autolysins,_phage,_and_phage-like_lysins	Prophage_lysogenic_conversion_modules
Phage head protein [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Phage hyaluronidase	Prophage_lysogenic_conversion_modules
Phage major tail shaft protein	Phage_tail_proteins
Phage minor tail protein	Phage_tail_proteins
Phage portal protein	Phage_packaging_machinery
Phage shock protein A	Phage_shock_protein_(psp)_operon
Phage shock protein B	Phage_shock_protein_(psp)_operon
Phage shock protein C	Phage_shock_protein_(psp)_operon
Phage shock protein D	Phage_shock_protein_(psp)_operon
Phage shock protein E	Phage_shock_protein_(psp)_operon
Phage shock protein E precursor	Phage_shock_protein_(psp)_operon
Phage T7 exclusion protein	CBSS-159087.4.peg.2189
Phage tail assembly chaperone	Phage_tail_proteins
Phage tail assembly protein	Phage_tail_proteins
Phage tail assembly protein I	Phage_tail_proteins
Phage tail fiber protein	Phage_tail_proteins
Phage tail length tape-measure protein	Phage_tail_proteins
Phage tail length tape-measure protein 1	Phage_tail_proteins
Phage terminase large subunit	Phage_packaging_machinery
Phage terminase, large subunit [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
Phage terminase small subunit	Phage_packaging_machinery
Phage terminase, small subunit [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
PhaK-like protein	Protocatechuate_branch_of_beta-ketoadipate_pathway
Phenazine biosynthesis protein PhzA	Phenazine_biosynthesis
Phenazine biosynthesis protein PhzB	Phenazine_biosynthesis
Phenazine biosynthesis protein PhzC	Phenazine_biosynthesis
Phenazine biosynthesis protein PhzD	Phenazine_biosynthesis
Phenazine biosynthesis protein PhzE	Phenazine_biosynthesis
Phenazine biosynthesis protein PhzF	Phenazine_biosynthesis
Phenazine biosynthesis protein PhzG	Phenazine_biosynthesis
Phenazine modifying protein PhzH	Phenazine_biosynthesis
Phenazine-specific methyltransferase PhzM	Phenazine_biosynthesis
Phenylacetaldehyde dehydrogenase (EC 1.2.1.39)	Phenylacetyl-CoA_catabolic_pathway_(core)	Aromatic_Amin_Catabolism
Phenylacetate-CoA oxygenase, PaaG subunit	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetate-CoA oxygenase, PaaH subunit	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetate-CoA oxygenase, PaaI subunit	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetate-CoA oxygenase, PaaJ subunit	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Aromatic_amino_acid_interconversions_with_aryl_acids
Phenylacetate-coenzyme A ligase (EC 6.2.1.30) PaaF	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetate degradation enoyl-CoA hydratase PaaA (EC 4.2.1.17)	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17)	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetic acid degradation operon negative regulatory protein PaaX	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetic acid degradation protein PaaD, thioesterase	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetic acid degradation protein PaaE, ketothiolase	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetic acid degradation protein PaaN2, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetic acid degradation protein PaaY	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylacetic acid-specific porin PaaM	Phenylacetyl-CoA_catabolic_pathway_(core)
Phenylalanine-4-hydroxylase (EC 1.14.16.1)	Pterin_metabolism_3	Pterin_metabolism	Pterin_carbinolamine_dehydratase	Aromatic_amino_acid_degradation	Pterin_biosynthesis
Phenylalanine hydroxylase transcriptional activator PhhR	Aromatic_amino_acid_degradation
Phenylalanine-specific permease	Aromatic_amino_acid_degradation
Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	tRNA_aminoacylation
Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20), mitochondrial	tRNA_aminoacylation,_mitochondrial
Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	tRNA_aminoacylation
Phenylitaconyl-CoA hydratase (EC 4.2.1.-)	Anaerobic_toluene_and_ethylbenzene_degradation
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit	Phenylpropanoid_compound_degradation
Pheophorbide a oxygenase (EC 1.14.-.-)	Chlorophyll_Degradation
Pheromone binding protein TraC/PrgZ	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Pheromone cAD1 precursor lipoprotein Cad	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Pheromone cAM373 precursor lipoprotein CamE	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Pheromone response surface protein PrgC	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
Pheromone shutdown protein TraB/PrgY	Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes
phi 11 orf31 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf32 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf33 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf35 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf36 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf37 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf38 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf39 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf40 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf41 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
phi 11 orf43 homolog [SA bacteriophages 11, Mu50B]	Staphylococcal_phi-Mu50B-like_prophages
"phi-Carotenoid synthase" (EC 1.3.-.- and EC 2.1.1-)	Carotenoids
PhnB protein	Alkylphosphonate_utilization
PhnG protein	Alkylphosphonate_utilization
PhnH protein	Alkylphosphonate_utilization
PhnI protein	Alkylphosphonate_utilization
PhnJ protein	Alkylphosphonate_utilization
PhnO protein	Alkylphosphonate_utilization
Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem	CBSS-393123.3.peg.2365	Chitin_and_N-acetylglucosamine_utilization	CBSS-176279.3.peg.298
Phosphatase, Ppx/GppA family	Phosphate_metabolism
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	P_uptake_(cyanobacteria)	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism
Phosphate acetyltransferase (EC 2.3.1.8)	Acetyl-CoA_pathway_of_CO2_fixation	Propanediol_utilization	Fermentations:_Mixed_acid	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Fermentations:_Lactate	Threonine_anaerobic_catabolism_gene_cluster	MLST	Ethanolamine_utilization	C_jejuni_colonization_of_chick_caeca
Phosphate acetyltransferase (EC 2.3.1.8), ethanolamine utilization-specific	Ethanolamine_utilization
Phosphate:acyl-ACP acyltransferase PlsX	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CBSS-198215.1.peg.1051
Phosphate butyryltransferase (EC 2.3.1.19)	Valine_degradation	CBSS-335541.4.peg.1350	Acetyl-CoA_fermentation_to_Butyrate	Isoleucine_degradation
Phosphate permease PHO89 (Na( )/Pi cotransporter PHO89)	Phosphate_metabolism
Phosphate regulon sensor protein PhoR (EC 2.7.3.-)	P_uptake_(cyanobacteria)	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism
Phosphate regulon sensor protein SphS (EC 2.7.13.3)	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism
Phosphate regulon transcriptional regulatory protein PhoB	P_uptake_(cyanobacteria)	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism
Phosphate regulon transcriptional regulatory protein SphR	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism
Phosphate-specific outer membrane porin OprP	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism
Phosphate starvation-inducible protein PhoH, predicted ATPase	CBSS-56780.10.peg.1536	Putative_hemin_transporter	Phosphate_metabolism
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	P_uptake_(cyanobacteria)	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism
Phosphate transport regulator (distant homolog of PhoU)	Phosphate_metabolism
Phosphate transport system permease protein pstC (TC 3.A.1.7.1)	P_uptake_(cyanobacteria)	Phosphate_metabolism
Phosphate transport system regulatory protein PhoU	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Phosphate_metabolism	Glutathione_analogs:_mycothiol
Phosphatidate cytidylyltransferase (EC 2.7.7.41)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CBSS-316407.3.peg.1371
Phosphatidylglycerophosphatase A (EC 3.1.3.27)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria
Phosphatidylglycerophosphatase B (EC 3.1.3.27)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria
Phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57)	CBSS-1806.1.peg.1285
Phosphatidylinositol-specific phospholipase C (EC 4.6.1.13)	Listeria_Pathogenicity_Island_LIPI-1_extended
Phosphatidylserine decarboxylase (EC 4.1.1.65)	Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Bacterial_cyanide_production_and_tolerance_mechanisms
Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54)	Carboxysome
Phosphoacetylglucosamine mutase (EC 5.4.2.3)	UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis
Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)	Cysteine_Biosynthesis	Inorganic_Sulfur_Assimilation
Phosphoanhydride phosphohydrolase (EC 3.1.3.2) (pH 2.5 acid phosphatase) (AP)	Capsular_Polysaccharides_Biosynthesis_and_Assembly
Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated	ZZ_gjo_need_homes
Phosphocarrier protein of PTS system	Galactose-inducible_PTS	HPr_catabolite_repression_system	Fructose_and_Mannose_Inducible_PTS	Mannitol_Utilization	Sucrose-specific_PTS
Phospho-di-inositol-1-phosphate synthase (EC 2.7.8.-)	Di-Inositol-Phosphate_biosynthesis
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	CBSS-584.1.peg.3382	Serine-glyoxylate_cycle
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP
Phosphoenolpyruvate carboxylase, archaeal (EC 4.1.1.31)	Fermentations:_Mixed_acid	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Serine-glyoxylate_cycle
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)	Fermentations:_Mixed_acid	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Serine-glyoxylate_cycle
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL	Dihydroxyacetone_kinases
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK	Dihydroxyacetone_kinases
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM	Dihydroxyacetone_kinases
Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)	Phosphoenolpyruvate_phosphomutase
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	Galactose-inducible_PTS	Fructose_and_Mannose_Inducible_PTS	Mannitol_Utilization	Sucrose-specific_PTS
Phosphoenolpyruvate synthase (EC 2.7.9.2)	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Glycolysis_and_Gluconeogenesis	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Phosphoesterase, DHH family protein	CBSS-262719.3.peg.410	SA:14-24
Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A	Lipid_A_modifications
Phosphoethanolamine transferase specific for the outer Kdo residue of lipopolysaccharide	Lipid_A_modifications
Phosphoglucomutase (EC 5.4.2.2)	Sucrose_Metabolism
Phosphogluconate dehydratase (EC 4.2.1.12)	Formaldehyde_assimilation:_Ribulose_monophosphate_pathway	D-gluconate_and_ketogluconates_metabolism	Entner-Doudoroff_Pathway	Pentose_phosphate_pathway
Phosphoglucosamine mutase (EC 5.4.2.10)	CBSS-261591.3.peg.3916	UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Sialic_Acid_Metabolism
Phosphoglycerate kinase (EC 2.7.2.3)	Calvin-Benson_cycle	Glycolysis_and_Gluconeogenesis	YgfZ	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Phosphoglycerate mutase (EC 5.4.2.1)	Glycolysis_and_Gluconeogenesis	Entner-Doudoroff_Pathway	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Phosphoglycerate transporter protein PgtP	Phosphoglycerate_transport_system
Phosphoglycerate transport regulatory protein PgtC	Phosphoglycerate_transport_system
Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-)	Phosphoglycerate_transport_system
Phosphoglycerate transport system transcriptional regulatory protein PgtA	Phosphoglycerate_transport_system
Phosphoglycerol transferase I (EC 2.7.8.20)	Synthesis_of_osmoregulated_periplasmic_glucans
Phosphoglyceromutase	Serine-glyoxylate_cycle
Phosphoglycolate phosphatase (EC 3.1.3.18)	2-phosphoglycolate_salvage	Glycolate,_glyoxylate_interconversions	Photorespiration_(oxidative_C2_cycle)
Phosphoheptose isomerase 1 (EC 5.3.1.-)	Capsular_heptose_biosynthesis	LOS_core_oligosaccharide_biosynthesis
Phosphoheptose isomerase 2 (EC 5.3.1.-)	Capsular_heptose_biosynthesis	LOS_core_oligosaccharide_biosynthesis
Phosphoheptose isomerase (EC 5.3.1.-)	Capsular_heptose_biosynthesis	LOS_core_oligosaccharide_biosynthesis
Phosphohistidine phosphatase SixA	CBSS-235.1.peg.567	CBSS-584.1.peg.2497
Phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4)	Triacylglycerol_metabolism
Phospholipid-lipopolysaccharide ABC transporter	N-linked_Glycosylation_in_Bacteria
Phosphomannomutase (EC 5.4.2.8)	Alginate_metabolism	CBSS-261591.3.peg.3916	Perosamine_Synthesis_Vibrio	Mannose_Metabolism
Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Thiamin_biosynthesis
Phosphomevalonate kinase (EC 2.7.4.2)	Staphylococcus_aureus_hypothetical_repetitive_gene_loci	Archaeal_lipids	Isoprenoid_Biosynthesis	Mevalonate_Branch_of_Isoprenoid_Biosynthesis
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	Peptidoglycan_Biosynthesis	Peptidoglycan_Biosynthesis_2
Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)
Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)	ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)
Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1)	ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)
Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)	ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)
Phosphonates transport ATP-binding protein PhnK	Alkylphosphonate_utilization
Phosphonates transport ATP-binding protein PhnL	Alkylphosphonate_utilization
Phosphonate uptake and metabolism regulator, LysR-family	Phosphonate_metabolism
Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)	Phosphonate_metabolism
Phosphonoacetate hydrolase (EC 3.11.1.2)	Phosphonate_metabolism
Phosphonopyruvate decarboxylase (EC 4.1.1.82)	Phosphoenolpyruvate_phosphomutase
Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	CBSS-269801.1.peg.1715	Coenzyme_A_Biosynthesis
Phosphopantetheine adenylyltransferase, type II eukaryotic (EC 2.7.7.3)	Coenzyme_A_Biosynthesis
Phosphopantetheinyl transferase component of siderophore synthetase (EC 2.7.8.-)	Iron_acquisition_in_Vibrio
Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	Coenzyme_A_Biosynthesis
Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	Coenzyme_A_Biosynthesis
Phosphopentomutase (EC 5.4.2.7)	Deoxyribose_and_Deoxynucleoside_Catabolism
Phosphorelay protein LuxU	Quorum-sensing_in_Vibrio
Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	De_Novo_Purine_Biosynthesis
Phosphoribosylaminoimidazolecarboxamide formyltransferase [alternate form]	De_Novo_Purine_Biosynthesis
Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	5-FCL-like_protein	De_Novo_Purine_Biosynthesis
Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	De_Novo_Purine_Biosynthesis
Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	De_Novo_Purine_Biosynthesis
Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	CBSS-251221.1.peg.1863	De_Novo_Purine_Biosynthesis
Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	Zinc_regulated_enzymes	YgfZ	Histidine_Biosynthesis
Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	Tryptophan_synthesis	Auxin_biosynthesis
Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Histidine_Biosynthesis
Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-)	Malonate_decarboxylase
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Tryptophan_synthesis	Histidine_Biosynthesis
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein	Methanopterin_biosynthesis2
Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	YgfZ	De_Novo_Purine_Biosynthesis
Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	De_Novo_Purine_Biosynthesis
Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	De_Novo_Purine_Biosynthesis
Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	De_Novo_Purine_Biosynthesis
Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)	De_Novo_Purine_Biosynthesis
Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	5-FCL-like_protein	Glutathione-regulated_potassium-efflux_system_and_associated_functions	De_Novo_Purine_Biosynthesis
Phosphoribulokinase (EC 2.7.1.19)	Calvin-Benson_cycle	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown	Calvin-Benson_cycle
Phosphoserine aminotransferase (EC 2.6.1.52)	Aminotransferases:Aromatic_Pathway_and_More,_A_work_in_progress	Serine_Biosynthesis	Pyridoxin_(Vitamin_B6)_Biosynthesis	Glycine_and_Serine_Utilization
Phosphoserine aminotransferase, putative (EC 2.6.1.52)	Serine_Biosynthesis
Phosphoserine phosphatase (EC 3.1.3.3)	Serine_Biosynthesis	Glycine_and_Serine_Utilization
Phosphoserine phosphatase, putative (EC 3.1.3.3)	Serine_Biosynthesis
Phosphosugar-binding transcriptional repressor, RpiR family	Galactose-inducible_PTS
Phosphosulfolactate synthase (EC 4.4.1.19)	coenzyme_M_biosynthesis
Phosphotransferase system for xylose-containing disaccharide, EIIA component	Xylose_utilization
Phosphotransferase system for xylose-containing disaccharide, EIIB component	Xylose_utilization
Phosphotransferase system for xylose-containing disaccharide, EIIC component	Xylose_utilization
Phosphotransferase system for xylose-containing disaccharide, EIID component	Xylose_utilization
Phosphotransferase system HPr enzyme in cluster with fructose-bisphosphate aldolase	Unknown_carbohydrate_utilization_containing_Fructose-bisphosphate_aldolase
Photosynthetic reaction center cytochrome c subunit	Photosystem_II-type_photosynthetic_reaction_center
Photosynthetic reaction center H subunit	Photosystem_II-type_photosynthetic_reaction_center
Photosynthetic reaction center L subunit	Photosystem_II-type_photosynthetic_reaction_center	Photorespiration_(oxidative_C2_cycle)
Photosynthetic reaction center M subunit	Photosystem_II-type_photosynthetic_reaction_center	Photorespiration_(oxidative_C2_cycle)
photosystem I 4.8K protein (PsaX)	Photosystem_I
photosystem I assembly related protein Ycf3	Photosystem_I
photosystem I assembly related protein Ycf37	Photosystem_I
photosystem I assembly related protein Ycf4	Photosystem_I
photosystem I biogenesis protein BtpA	Photosystem_I
Photosystem II 10 kDa phosphoprotein (PsbH)	Photosystem_II
Photosystem II 10 kDa protein PsbR	Photosystem_II
Photosystem II 12 kDa extrinsic protein (PsbU)	Photosystem_II
Photosystem II 13 kDa protein Psb28 (PsbW)	Photosystem_II
Photosystem II 5 kDa protein PsbTn (nuclear encoded)	Photosystem_II
Photosystem II 6.1 kDa protein PsbW (nuclear encoded)	Photosystem_II
Photosystem II CP43 protein (PsbC)	Photosystem_II
Photosystem II CP47 protein (PsbB)	Photosystem_II
Photosystem II manganese-stabilizing protein (PsbO)	Photosystem_II
Photosystem II oxygen evolving complex protein PsbP	Photosystem_II
Photosystem II oxygen evolving complex protein PsbQ	Photosystem_II
photosystem II protein D1 (PsbA)	Photosystem_II
photosystem II protein D2 (PsbD)	Photosystem_II	Photorespiration_(oxidative_C2_cycle)
Photosystem II protein Psb27	Photosystem_II
Photosystem II protein PsbI	Photosystem_II
Photosystem II protein PsbJ	Photosystem_II
Photosystem II protein PsbK	Photosystem_II
Photosystem II protein PsbL	Photosystem_II
Photosystem II protein PsbM	Photosystem_II
Photosystem II protein PsbN	Photosystem_II
Photosystem II protein PsbT	Photosystem_II
Photosystem II protein PsbV, cytochrome c550	Photosystem_II	Soluble_cytochromes_and_functionally_related_electron_carriers
Photosystem II protein PsbX	Photosystem_II
Photosystem II protein PsbY	Photosystem_II
Photosystem II protein PsbZ	Photosystem_II
photosystem II reaction center PsbP family protein	Photosystem_II
photosystem I iron-sulfur center subunit VII (PsaC)	Photosystem_I
Photosystem II stability/assembly factor HCF136/Ycf48	Photosystem_II
photosystem I P700 chlorophyll a apoprotein subunit Ia (PsaA)	Photosystem_I	Photorespiration_(oxidative_C2_cycle)
photosystem I P700 chlorophyll a apoprotein subunit Ib (PsaB)	Photosystem_I
photosystem I subunit III precursor, plastocyanin (cyt c553) docking protein (PsaF)	Photosystem_I
photosystem I subunit II (PsaD)	Photosystem_I
photosystem I subunit IV (PsaE)	Photosystem_I
photosystem I subunit IX (PsaJ)	Photosystem_I
photosystem I subunit PsaN	Photosystem_I
photosystem I subunit PsaO	Photosystem_I
photosystem I subunit VIII (PsaI)	Photosystem_I
photosystem I subunit VI (PsaH)	Photosystem_I
photosystem I subunit V (PsaG/PsaK)	Photosystem_I
photosystem I subunit XII (PsaM)	Photosystem_I
photosystem I subunit XI (PsaL)	Photosystem_I
photosystem I subunit X (PsaK, PsaK1)	Photosystem_I
Photosystem P840 reaction center iron-sulfur subunit PscB	Photosystem_I-type_photosynthetic_reaction_center
Photosystem P840 reaction center large subunit PscA	Photosystem_I-type_photosynthetic_reaction_center	Photorespiration_(oxidative_C2_cycle)
Photosystem P840 reaction center subunit PscC, cytochrome c-551	Photosystem_I-type_photosynthetic_reaction_center
Photosystem P840 reaction center subunit PscD	Photosystem_I-type_photosynthetic_reaction_center
Phycobilisome core component	Phycobilisome
Phycobilisome core-membrane linker polypeptide	Phycobilisome
Phycobilisome degradation protein NblA	Phycobilisome
Phycobilisome phycoerythrin-associated linker polypeptide	Phycobilisome
Phycobilisome rod-core linker polypeptide, phycocyanin-associated	Phycobilisome
Phycobilisome rod linker polypeptide, phycocyanin-associated	Phycobilisome
Phycobilisome rod linker polypeptide, phycoerythrocyanin-associated	Phycobilisome
Phycobilisome small core linker polypeptide	Phycobilisome
Phycobilisome small rod capping linker polypeptide, phycocyanin-associated	Phycobilisome
Phycocyanin alpha chain	Phycobilisome
Phycocyanin alpha phycocyanobilin lyase related protein NblB	Phycobilisome
Phycocyanin beta chain	Phycobilisome
Phycocyanobilin:ferredoxin oxidoreductase PcyA (EC 1.3.7.5)	Bilin_Biosynthesis
Phycocyanobilin lyase alpha subunit	Bilin_Biosynthesis	Phycobilisome
Phycocyanobilin lyase beta subunit	Bilin_Biosynthesis	Phycobilisome
Phycoerythrin alpha chain	Phycobilisome
Phycoerythrin beta chain	Phycobilisome
Phycoerythrin gamma chain linker polypeptide	Phycobilisome
Phycoerythrin linker protein CpeS homolog	Phycobilisome
Phycoerythrobilin:ferredoxin oxidoreductase PebB (EC 1.3.7.3)	Bilin_Biosynthesis
Phycoerythrocyanin alpha chain	Phycobilisome
Phycoerythrocyanin beta chain	Phycobilisome
P-hydroxybenzoate hydroxylase (EC 1.14.13.2)	p-Hydroxybenzoate_degradation
P-hydroxylaminobenzoate lyase	Benzoate_transport_and_degradation_cluster
Phytochelatin synthase (EC 2.3.2.15), bacterial type	Glutathione:_Non-redox_reactions
Phytochelatin synthase (EC 2.3.2.15), eukaryotic type	Glutathione:_Non-redox_reactions
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)	Oxygen_and_light_sensor_PpaA-PpsR	Oxidative_stress	Phytochromes
Phytochromobilin:ferredoxin oxidoreductase (EC 1.3.7.4)	Bilin_Biosynthesis
Phytoene dehydrogenase and related proteins	Carotenoids
Phytoene dehydrogenase (EC 1.14.99.-)	Carotenoids	Proteorhodopsin
Phytoene desaturase (EC 1.14.99.-)	Carotenoids	CBSS-320388.3.peg.3759
Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)	Carotenoids
Phytoene desaturase, pro-zeta-carotene producing (EC 1.-.-.-)	Carotenoids
Phytoene synthase (EC 2.5.1.32)	Carotenoids	CBSS-320388.3.peg.3759	Proteorhodopsin
PilD	Bacterial_motility:Gliding
pilin	Bacterial_motility:Gliding
Pili retraction protein pilT	Bacterial_motility:Gliding
PilS cassette	Type_IV_pilus	Bacterial_motility:Gliding
PilT	Bacterial_motility:Gliding
Pimeloyl-CoA synthase (EC 6.2.1.14)	Biotin_biosynthesis
Pirin-like protein YhaK	Conserved_cluster_in_Enterobacteriaceae_downstream_from_YqjA,_a_DedA_family_protein
Pirin-related protein, coexpressed with pyoverdine biosynthesis regulon	Pyoverdine_biosynthesis_new
Plant-induced nitrilase (EC 3.5.5.1), hydrolyses beta-cyano-L-alanine	Nitrilase
Plant-inducible protein PinF1, cytochrome P450-like, contributes to virulence	Plasmid-encoded_T-DNA_transfer
Plant-inducible protein PinF2, cytochrome P450-like, contributes to virulence	Plasmid-encoded_T-DNA_transfer
Plasmid conjugative transfer DNA helicase TrhI	DNA_repair,_bacterial_UvrD_and_related_helicases
Plasmid conjugative transfer endonuclease	Type_4_conjugative_transfer_system,_IncI1_type
Plasmid partitioning protein ParA	pVir_Plasmid_of_Campylobacter
Plasmid replication protein RepA	CBSS-203122.12.peg.188	Plasmid_replication
Plasmid replication protein RepB	Plasmid_replication
Plasmid replication protein RepC	Plasmid_replication
Plasminogen activator inhibitor-1, protease inhibitor I04.020	Coagulation_cascade
Plasmin(ogen) receptor	Streptococcus_pyogenes_Virulome
Plasmin, protease S01.233	Coagulation_cascade
PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene	CBSS-265072.7.peg.546
PlcR activating protein PapR, quorum-sensing effector	Bacillus_biofilm_matrix_protein_component_TasA_and_homologs
Pleiotropic negative regulator for morphological and physiological development in Streptomyces, BldD	2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone_and_other_bacterial_morphogens
PnuC-like transporter linked to homoserine kinase and OMR	PnuC-like_transporters
Pole remodelling regulatory diguanylate cyclase	ZZ_gjo_need_homes
Poly(3-hydroxyalkanoate) depolymerase	Polyhydroxybutyrate_metabolism
Poly [ADP-ribose] polymerase-1 (EC 2.4.2.30)	Redox-dependent_regulation_of_nucleus_processes
Poly(A) polymerase (EC 2.7.7.19)	tRNA_nucleotidyltransferase	Polyadenylation_bacterial
Poly(beta-D-mannuronate) C5 epimerase precursor (EC 5.1.3.-)	Alginate_metabolism
poly(beta-D-mannuronate) lyase (EC 4.2.2.3)	D-Galacturonate_Utilization	Alginate_metabolism	D-Galacturonate_and_D-Glucuronate_Utilization
Polyferredoxin NapH (periplasmic nitrate reductase)	Nitrate_and_nitrite_ammonification
Poly-gamma-glutamate synthase subunit PgsA/CapA (EC 6.3.2.-)	Poly-gamma-glutamate_biosynthesis
Poly-gamma-glutamate synthase subunit PgsB/CapB (EC 6.3.2.-)	Poly-gamma-glutamate_biosynthesis
Poly-gamma-glutamate synthase subunit PgsC/CapC (EC 6.3.2.-)	Poly-gamma-glutamate_biosynthesis
Poly-gamma-glutamate synthase subunit PgsE/CapE (EC 6.3.2.-)	Poly-gamma-glutamate_biosynthesis
Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)	Teichoic_and_lipoteichoic_acids_biosynthesis
Poly(glycerophosphate chain) D-alanine transfer protein DltD	Teichoic_and_lipoteichoic_acids_biosynthesis	D-Alanyl_Lipoteichoic_Acid_Biosynthesis	Methicillin_resistance_in_Staphylococci
Polyhydroxyalkanoate granule-associated protein PhaF	Polyhydroxybutyrate_metabolism
polyhydroxyalkanoate granule-associated protein PhaI	Polyhydroxybutyrate_metabolism
polyhydroxyalkanoate synthesis repressor PhaR	Serine-glyoxylate_cycle	Polyhydroxybutyrate_metabolism
Polyhydroxyalkanoic acid synthase	Polyhydroxybutyrate_metabolism
Polymyxin resistance protein ArnA_DH, UDP-glucuronic acid decarboxylase (EC 4.1.1.-)	Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)
Polymyxin resistance protein ArnA_FT, UDP-4-amino-4-deoxy-L-arabinose formylase (EC 2.1.2.-)	Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)
Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-)	Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)
Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase	Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)
Polymyxin resistance protein PmrD	Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)
Polymyxin resistance protein PmrG	Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)
Polymyxin resistance protein PmrJ, predicted deacetylase	Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)
Polymyxin resistance protein PmrL, sucrose-6 phosphate hydrolase	Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)
Polymyxin resistance protein PmrM	Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)
Polymyxin synthetase PmxA	Polymyxin_Synthetase_Gene_Cluster_in_Bacillus
Polymyxin synthetase PmxB	Polymyxin_Synthetase_Gene_Cluster_in_Bacillus
Polymyxin transporter PmxC	Polymyxin_Synthetase_Gene_Cluster_in_Bacillus
Polyphosphate glucokinase (EC 2.7.1.63)	Glycolysis_and_Gluconeogenesis	Entner-Doudoroff_Pathway
Polyphosphate kinase (EC 2.7.4.1)	High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Purine_conversions	Phosphate_metabolism
Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyadenylation_bacterial	CBSS-350688.3.peg.1509
Polysaccharide biosynthesis chain length regulator SypO	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Polysaccharide biosynthesis glycosyl transferase CpsJ	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Streptococcus_agalactiae_virulome
Polysaccharide biosynthesis glycosyl transferase CpsN	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci
Polysaccharide biosynthesis glycosyl transferase CpsO	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci
Polysaccharide biosynthesis protein CpsF	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Streptococcus_agalactiae_virulome
Polysaccharide biosynthesis protein CpsH(V)	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci
Polysaccharide biosynthesis protein CpsM(V)	Extracellular_Polysaccharide_Biosynthesis_of_Streptococci
polysaccharide biosynthesis protein, putative	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Polysaccharide deacetylase	Vibrio_Core_Oligosaccharide_Biosynthesis	Polysaccharide_deacetylases
Polysaccharide deacetylase, caspase activity	Bacterial_Caspases
Polysaccharide export lipoprotein Wza	Capsular_Polysaccharides_Biosynthesis_and_Assembly	Colanic_acid_biosynthesis
polysaccharide export protein, putative	Vibrio_Polysaccharide_(VPS)_Biosynthesis
Polysaccharide intercellular adhesin (PIA) biosynthesis deacetylase IcaB (EC 3.-.-.-)	Polysaccharide_deacetylases	Biofilm_formation_in_Staphylococcus
Polysaccharide intercellular adhesin (PIA) biosynthesis N-glycosyltransferase IcaA (EC 2.4.-.-)	Biofilm_formation_in_Staphylococcus
Polysaccharide intercellular adhesin (PIA) biosynthesis protein IcaC	Biofilm_formation_in_Staphylococcus
Polysaccharide intercellular adhesin (PIA) biosynthesis protein IcaD	Biofilm_formation_in_Staphylococcus
Polysialic acid capsule sugar isomerase, KpsF/GutQ family	CBSS-316057.3.peg.659
Polysialic acid transport protein KpsM	Rhamnose_containing_glycans
polysulfide reductase, subunit A	Anaerobic_respiratory_reductases
Polysulfide reductase, subunit A, putative	Anaerobic_respiratory_reductases
polysulfide reductase, subunit B	Anaerobic_respiratory_reductases
Polysulfide reductase, subunit B, putative	Anaerobic_respiratory_reductases
polysulfide reductase, subunit C	Anaerobic_respiratory_reductases
Polysulfide reductase, subunit C, putative	Anaerobic_respiratory_reductases
Porphobilinogen deaminase (EC 2.5.1.61)	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Porphobilinogen synthase (EC 4.2.1.24)	Heme_and_Siroheme_Biosynthesis	Zinc_regulated_enzymes	Experimental_tye
Portal protein [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Positive regulator of CheA protein activity (CheW)	Bacterial_Chemotaxis	Two-component_regulatory_systems_in_Campylobacter
Positive regulator of competence TfoX	Natural_DNA_Transformation_in_Vibrio
Positive regulator of L-idonate catabolism	D-gluconate_and_ketogluconates_metabolism
Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme	Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	CBSS-344610.3.peg.2335
Positive transcription regulator EvgA	Orphan_regulatory_proteins
Possible 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-)	CBSS-316056.14.peg.880	Homogentisate_pathway_of_aromatic_compound_degradation
Possible ABC transporter, periplasmic substrate X binding protein precursor	ABC_transporter_of_unknown_substrate_X
Possible alpha-xyloside ABC transporter, ATP-binding component	Xylose_utilization
Possible alpha-xyloside ABC transporter, permease component	Xylose_utilization
Possible alpha-xyloside ABC transporter, substrate-binding component	Xylose_utilization
Possible alternative L-fucose mutarotase	L-fucose_utilization	L-fucose_utilization_temp
Possible bacterioferritin	Campylobacter_Iron_Metabolism
Possible carbon dioxide concentrating mechanism protein CcmK	CO2_uptake,_carboxysome
Possible colicin V production protein	CBSS-198094.1.peg.4426
POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN	CBSS-196164.1.peg.1690
Possible D-erythrulose 4-phosphate dehydrogenase EryC (EC 1.1.1.-)	Erythritol_utilization
Possible divergent polysaccharide deacetylase	CBSS-224911.1.peg.435
Possible electron transfer protein FdxB (EC 1.-.-.-)	CBSS-164757.7.peg.5020
Possible fucose ABC transporter, ATP-binding component	L-fucose_utilization
Possible fucose ABC transporter, permease component	L-fucose_utilization
Possible fucose ABC transporter, substrate-binding component	L-fucose_utilization
Possible GPH family transporter (TC 2.A.2) for arabinosides	L-Arabinose_utilization
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway	Pyrimidine_utilization
Possible hypoxanthine oxidase XdhD (EC 1.-.-.-)	Putative_diaminopropionate_ammonia-lyase_cluster	Purine_conversions
Possible potassium-efflux system protein	Potassium_homeostasis
Possible pterin-4 alpha-carbinolamine dehydratase-like protein	CO2_uptake,_carboxysome
Possible pyrimidine permease in reductive pathway	Pyrimidine_utilization
Possible rhamnose ABC transporter, ATP-binding component	L-rhamnose_utilization
Possible rhamnose ABC transporter, permease component 1	L-rhamnose_utilization
Possible rhamnose ABC transporter, permease component 2	L-rhamnose_utilization
Possible rhamnose ABC transporter, substrate-binding component	L-rhamnose_utilization
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway	Pyrimidine_utilization
Possible RuBisCo chaperonin RbcX	Calvin-Benson_cycle	CO2_uptake,_carboxysome
Possible subunit variant of phosphoribosylaminoimidazolecarboxamide formyltransferase [alternate form]	De_Novo_Purine_Biosynthesis
Possible third subunit-variant of phosphoribosylaminoimidazolecarboxamide formyltransferase [alternate form]	De_Novo_Purine_Biosynthesis
Possibly related to ydbT	Experimental_tye
Potassium channel protein	Potassium_homeostasis
Potassium channel protein 1 (MjK1)	Potassium_homeostasis
Potassium efflux system f786	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Potassium efflux system KefA protein	Potassium_homeostasis
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel	Glutathione-regulated_potassium-efflux_system_and_associated_functions
Potassium efflux system YjeP	Glutathione-regulated_potassium-efflux_system_and_associated_functions
POTASSIUM/PROTON ANTIPORTER ROSB	Potassium_homeostasis
Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)	Potassium_homeostasis
Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC  3.A.3.7.1)	P-type_ATPase_transporter_potassium_(TC_3.A.3.7.1)
Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)	Potassium_homeostasis
Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)	P-type_ATPase_transporter_potassium_(TC_3.A.3.7.1)	Potassium_homeostasis
Potassium uptake protein, integral membrane component, KtrA	Hyperosmotic_potassium_uptake	Potassium_homeostasis
Potassium uptake protein, integral membrane component, KtrB	Hyperosmotic_potassium_uptake	Potassium_homeostasis
Potassium uptake protein TrkH	Potassium_homeostasis
Potassium voltage-gated channel subfamily A member 4	Potassium_homeostasis
Potassium voltage-gated channel subfamily B member 1	Potassium_homeostasis
Potassium voltage-gated channel subfamily KQT	Potassium_homeostasis
potential Fumarate hydratase class II (EC 4.2.1.2)	TCA_Cycle
Potential ribosomal protein	CBSS-176279.3.peg.868
PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation	Oxygen_and_light_sensor_PpaA-PpsR
PPE family protein	CBSS-164757.7.peg.5020
PqqC-like protein	Folate_Biosynthesis
PQS biosynthesis protein PqsA, anthranilate-CoA ligase (EC 6.2.1.32)	Pseudomonas_quinolone_signal_PQS
PQS biosynthesis protein PqsB, similar to 3-oxoacyl-[acyl-carrier-protein] synthase III	Pseudomonas_quinolone_signal_PQS
PQS biosynthesis protein PqsC, similar to 3-oxoacyl-[acyl-carrier-protein] synthase III	Pseudomonas_quinolone_signal_PQS
PQS biosynthesis protein PqsD, similar to 3-oxoacyl-[acyl-carrier-protein] synthase III	Pseudomonas_quinolone_signal_PQS
PQS biosynthesis protein PqsH, similar to FAD-dependent monooxygenases	Pseudomonas_quinolone_signal_PQS
PqsE, quinolone signal response protein	Quorum_sensing_regulation_in_Pseudomonas	Pseudomonas_quinolone_signal_PQS
Precorrin-2 oxidase (EC 1.3.1.76)	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Precorrin-6A synthase (EC 2.1.1.152)	Coenzyme_B12_biosynthesis
predicted 2-keto-3-deoxyxylonate dehydratase	Xylose_utilization
Predicted 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase	Benzoate_transport_and_degradation_cluster	Aromatic_amino_acid_degradation
Predicted 4-hydroxyproline dipeptidase	Proline,_4-hydroxyproline_uptake_and_utilization
Predicted 5-dehydro-4-deoxyglucarate regulator YcbG	D-galactarate,_D-glucarate_and_D-glycerate_catabolism
Predicted adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62)	Coenzyme_B12_biosynthesis
Predicted alpha-ribazole-5'-phosphate phosphatase CobZ (EC 3.1.3.73)	Coenzyme_B12_biosynthesis
Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis	Coenzyme_B12_biosynthesis
Predicted alternative glutathione synthetase (EC 6.3.2.3)	Glutathione_synthesis	Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione:_Non-redox_reactions
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway	Pyrimidine_utilization
Predicted amino-acid acetyltransferase (EC 2.3.1.1) complementing ArgA function in Arginine Biosynthesis pathway	Arginine_Biosynthesis_extended
Predicted aminoglycoside phosphotransferase	CBSS-216591.1.peg.168
Predicted ATPase related to phosphate starvation-inducible protein PhoH	Phosphate_metabolism
Predicted ATPase with chaperone activity, associated with Flp pilus assembly	Widespread_colonization_island
Predicted beta-xyloside ABC transporter, ATP-binding component	Sugar_utilization_in_Thermotogales	Xylose_utilization
Predicted beta-xyloside ABC transporter, permease component	Sugar_utilization_in_Thermotogales	Xylose_utilization
Predicted beta-xyloside ABC transporter, substrate-binding component	Sugar_utilization_in_Thermotogales	Xylose_utilization
Predicted b-glucoside-specific TonB-dependent outer membrane receptor	Ton_and_Tol_transport_systems	Beta-Glucoside_Metabolism
Predicted b-glucoside transporter, GPH family	Beta-Glucoside_Metabolism
predicted biotin regulatory protein BioR (GntR family)	Biotin_biosynthesis
Predicted biotin repressor from TetR family	Biotin_biosynthesis
Predicted carboxypeptidase	CBSS-216591.1.peg.168
Predicted cell-wall-anchored protein SasA (LPXTG motif)	Adhesins_in_Staphylococcus
Predicted cell-wall-anchored protein SasC (LPXTG motif)	Adhesins_in_Staphylococcus
Predicted cell-wall-anchored protein SasD (LPXAG motif)	Adhesins_in_Staphylococcus
Predicted cell-wall-anchored protein SasF (LPXAG motif)	Adhesins_in_Staphylococcus
Predicted cell-wall-anchored protein SasI (LPXTG motif)	Adhesins_in_Staphylococcus
Predicted cell-wall-anchored protein SasK (LPXTG motif)	Adhesins_in_Staphylococcus
Predicted cobalt ABC transporter periplasmic component	Transport_of_Nickel_and_Cobalt	Coenzyme_B12_biosynthesis
Predicted cobalt transporter CbtA	Transport_of_Nickel_and_Cobalt	Coenzyme_B12_biosynthesis
Predicted cobalt transporter CbtC	Transport_of_Nickel_and_Cobalt	Coenzyme_B12_biosynthesis
Predicted cobalt transporter in Bacteroides_Porphyromonas	Transport_of_Nickel_and_Cobalt	Coenzyme_B12_biosynthesis
Predicted cobalt transporter in Mycobacteria	Transport_of_Nickel_and_Cobalt	Coenzyme_B12_biosynthesis
Predicted cobalt transporter in sulfate-reducing delta-proteobacteria	Transport_of_Nickel_and_Cobalt	Coenzyme_B12_biosynthesis
Predicted cobalt transporter in Thermoplasma	Coenzyme_B12_biosynthesis
Predicted D-glucarate or D-galactorate regulator, GntR family	D-galactarate,_D-glucarate_and_D-glycerate_catabolism
Predicted D-glucarate or D-galactorate regulator, IclR family	D-galactarate,_D-glucarate_and_D-glycerate_catabolism
Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing	Lactate_utilization
Predicted endonuclease distantly related to archaeal Holliday junction resolvase	CBSS-160492.1.peg.550
Predicted erythritol ABC transporter 1, ATP-binding component 1	Erythritol_utilization
Predicted erythritol ABC transporter 1, ATP-binding component 2	Erythritol_utilization
Predicted erythritol ABC transporter 1, permease component 1	Erythritol_utilization
Predicted erythritol ABC transporter 1, permease component 2	Erythritol_utilization
Predicted erythritol ABC transporter 1, substrate-binding component	Erythritol_utilization
Predicted erythritol ABC transporter 2, ATP-binding component	Erythritol_utilization
Predicted erythritol ABC transporter 2, hypothetical lipoprotein	Erythritol_utilization
Predicted erythritol ABC transporter 2, permease component	Erythritol_utilization
Predicted erythritol ABC transporter 2, substrate-binding component	Erythritol_utilization
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway	Pyrimidine_utilization
Predicted Fructose-bisphosphate aldolase (EC 4.1.2.13) in Geobacter	Glycolysis_and_Gluconeogenesis
Predicted functional analog of homoserine kinase (EC 2.7.1.-)	Threonine_and_Homoserine_Biosynthesis	Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes
Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family	D-Tagatose_and_Galactitol_Utilization
Predicted galacto-N-biose-/lacto-N-biose I ABC transporter, periplasmic substrate-binding protein	Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway
Predicted galacto-N-biose-/lacto-N-biose I ABC transporter, permease component 1	Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway
Predicted galacto-N-biose-/lacto-N-biose I ABC transporter, permease component 2	Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway
Predicted gluconate TRAP family transporter, DctM subunit	D-gluconate_and_ketogluconates_metabolism
Predicted gluconate TRAP family transporter, DctP subunit	D-gluconate_and_ketogluconates_metabolism
Predicted gluconate TRAP family transporter, DctQ subunit	D-gluconate_and_ketogluconates_metabolism
Predicted glucose transporter in b-glucoside utilization gene cluster	Hexose_Phosphate_Uptake_System	Beta-Glucoside_Metabolism
Predicted glucose transporter in maltodextrin utilization gene cluster	Maltose_and_Maltodextrin_Utilization	Hexose_Phosphate_Uptake_System
Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type	Glycogen_metabolism
Predicted hydrolase of the metallo-beta-lactamase superfamily, clustered with KDO2-Lipid A biosynthesis genes	KDO2-Lipid_A_biosynthesis
Predicted hydroxymethylpyrimidine transporter CytX	Thiamin_biosynthesis
Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)	L-rhamnose_utilization
Predicted Lactate-responsive regulator, IclR family	Lactate_utilization
Predicted Lactate-responsive regulator, LysR family	Lactate_utilization
Predicted lactate-responsive transcriptional regulator of ykgEFG LDH gene cluster, LysR-type	Lactate_utilization
Predicted L-arabinose ABC transport system, ATP-binding protein	L-Arabinose_utilization
Predicted L-arabinose ABC transport system, periplasmic arabinose-binding protein	L-Arabinose_utilization
Predicted L-arabinose ABC transport system, permease protein 1	L-Arabinose_utilization
Predicted L-arabinose ABC transport system, permease protein 2	L-Arabinose_utilization
Predicted L-fucose-specific phosphotransferase system, EIIA component	L-fucose_utilization
Predicted L-fucose-specific phosphotransferase system, EIIB component	L-fucose_utilization
Predicted L-fucose-specific phosphotransferase system, EIIC component	L-fucose_utilization
Predicted L-fucose-specific phosphotransferase system, EIID component	L-fucose_utilization
Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	Lactate_utilization
Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	Lactate_utilization
Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG	Lactate_utilization
Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	Lactate_utilization
Predicted L-rhamnose ABC transporter, ATP-binding component	L-rhamnose_utilization
Predicted L-rhamnose ABC transporter, substrate-binding component	L-rhamnose_utilization
Predicted L-rhamnose ABC transporter, transmembrane component 1	L-rhamnose_utilization
Predicted L-rhamnose ABC transporter, transmembrane component 2	L-rhamnose_utilization
Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)	L-rhamnose_utilization
Predicted L-rhamnose permease RhaY	L-rhamnose_utilization
Predicted L-serine dehydratase (EC 4.3.1.17) TdcG	Pyruvate_Alanine_Serine_Interconversions	Threonine_anaerobic_catabolism_gene_cluster
Predicted maltose-specific TonB-dependent receptor	Maltose_and_Maltodextrin_Utilization
Predicted maltose transporter MalT	Maltose_and_Maltodextrin_Utilization
Predicted mannitol permease	Ribitol,_Xylitol,_Arabitol,_Mannitol_and_Sorbitol_utilization	Mannitol_Utilization
Predicted mannose transporter, GGP family	Mannose_Metabolism
Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG	ATP-dependent_efflux_pump_transporter_Ybh
predicted metal-dependent hydrolase	Phosphate_metabolism
Predicted methyltransferase, DUF43 family	tRNA_modification_Archaea	tRNA_modification_Archaea_Henri
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway	Pyrimidine_utilization
Predicted N6-adenine-specific RNA methylase containing THUMP domain	rRNA_modification	tRNA_modification_Archaea	rRNA_modification_Archaea	tRNA_modification_Archaea_Henri
Predicted N-acetylgalactosamine kinase, ROK-type (EC 2.7.1.157)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Predicted N-acetyl-glucosamine kinase 2, ROK family (EC 2.7.1.59)	Chitin_and_N-acetylglucosamine_utilization
predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)	Chitin_and_N-acetylglucosamine_utilization
predicted nucleic acid-binding protein, containing PIN domain COG1848	tRNA_modification_Archaea
Predicted nucleoside ABC transporter, ATP-binding component	Deoxyribose_and_Deoxynucleoside_Catabolism	D-ribose_utilization
Predicted nucleoside ABC transporter, permease 1 component	Deoxyribose_and_Deoxynucleoside_Catabolism	D-ribose_utilization
Predicted nucleoside ABC transporter, permease 2 component	Deoxyribose_and_Deoxynucleoside_Catabolism	D-ribose_utilization
Predicted nucleoside ABC transporter, substrate-binding component	Deoxyribose_and_Deoxynucleoside_Catabolism	D-ribose_utilization
Predicted nucleotidyltransferases	CBSS-203122.12.peg.188
Predicted oxidoreductase, Fe-S subunit	Putative_diaminopropionate_ammonia-lyase_cluster
Predicted P-loop ATPase fused to an acetyltransferase COG1444	tRNA_modification_yeast_cytoplasmic	tRNA_modification_Archaea	tRNA_modification_Bacteria	tRNA_modification_Archaea_Henri
Predicted polyamine sensor NspS, involved in biofilm formation	Polyamine_Metabolism
Predicted protein SypD	Symbiotic_colonization_and_sigma-dependent_biofilm_formation_gene_cluster
Predicted PTS system, galactosamine-specific IIA component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Predicted PTS system, galactosamine-specific IIB component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Predicted PTS system, galactosamine-specific IIC component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Predicted PTS system, galactosamine-specific IID component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
Predicted pyrimidine permease RutG in novel pyrimidine catabolism pathway	Pyrimidine_utilization
Predicted reductase RutE in novel pyrimidine catabolism pathway	Pyrimidine_utilization
Predicted rhamnogalacturonan lyase in rhamnose utilization cluster	L-rhamnose_utilization
Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC	L-rhamnose_utilization
Predicted rhamnogalacturonide-specific TRAP-type transporter, small transmembrane component RhiB	L-rhamnose_utilization
Predicted rhamnogalacturonide-specific TRAP-type transporter, substrate-binding component RhiA	L-rhamnose_utilization
Predicted rhamnose oligosaccharide ABC transport system, permease component	L-rhamnose_utilization
Predicted rhamnose oligosaccharide ABC transport system, permease component 2	L-rhamnose_utilization
Predicted rhamnose oligosaccharide ABC transport system, substrate-binding component	L-rhamnose_utilization
Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19)	L-rhamnose_utilization
Predicted RNA-binding protein COG1491	rRNA_modification	tRNA_modification_Archaea	rRNA_modification_Archaea	tRNA_modification_Archaea_Henri
Predicted RNA methylase COG2263	rRNA_modification	tRNA_modification_Archaea	rRNA_modification_Archaea	tRNA_modification_Archaea_Henri
Predicted sialic acid transporter	Sialic_Acid_Metabolism
Predicted signal transduction protein	Motility_of_Campylobacter	C_jejuni_colonization_of_chick_caeca
Predicted signal-transduction protein containing cAMP-binding and CBS domains	cAMP_signaling_in_bacteria	CBSS-342610.3.peg.1536
Predicted sodium-dependent mannose transporter	Mannose_Metabolism
Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase	tRNA_modification_Archaea_Henri
Predicted sucrose permease, MFS family, FucP subfamily	Sucrose_utilization_Shewanella	Sucrose_utilization
Predicted sucrose-specific TonB-dependent receptor	Sucrose_utilization_Shewanella	Sucrose_utilization
Predicted sugar ABC transport system, ATP-binding protein YphE	Unknown_sugar_utilization_(cluster_yphABCDEFG)
Predicted sugar ABC transport system, periplasmic binding protein YphF precursor	Unknown_sugar_utilization_(cluster_yphABCDEFG)
Predicted sugar ABC transport system, permease protein YphD	Unknown_sugar_utilization_(cluster_yphABCDEFG)
Predicted thiamin transporter PnuT	PnuC-like_transporters	Thiamin_biosynthesis
Predicted thiamin transporter ThiT	Thiamin_biosynthesis
Predicted thiazole transporter ThiU	Thiamin_biosynthesis
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family	Fatty_acid_degradation_regulons
Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family	Fatty_acid_degradation_regulons
Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family	Branched_chain_amino_acid_degradation_regulons
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	Branched_chain_amino_acid_degradation_regulons	HMG_CoA_Synthesis
Predicted transcriptional regulator of 4-carboxymuconolactone decarboxylase, Rrf2 family	Rrf2_family_transcriptional_regulators
Predicted transcriptional regulator of cysteine synthase, Rrf2 family	Rrf2_family_transcriptional_regulators
Predicted transcriptional regulator of leucine degradation pathway, MerR family	Valine_degradation	Isoleucine_degradation
Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family	Chitin_and_N-acetylglucosamine_utilization	Sugar_utilization_in_Thermotogales
Predicted transcriptional regulator of N-Acetylglucosamine utilization, LacI family	Chitin_and_N-acetylglucosamine_utilization
Predicted transcriptional regulator of NADH dehydrogenase, Rrf2 family	Rrf2_family_transcriptional_regulators
Predicted transcriptional regulator of sulfate adenylyltransferase, Rrf2 family	Rrf2_family_transcriptional_regulators
Predicted transcriptional regulator of sulfate transport, Rrf2 family	Rrf2_family_transcriptional_regulators
Predicted transcriptional regulator of the myo-inositol catabolic operon	Inositol_catabolism
Predicted trehalose permease, MFS family	Trehalose_Uptake_and_Utilization
Predicted trehalose permease, MFS family, FucP subfamily	Trehalose_Uptake_and_Utilization
Predicted zinc-binding protein	Transport_of_Zinc
Predictet Brp-like protein Blh	Proteorhodopsin
Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate_Synthesis
Prephenate dehydratase (EC 4.2.1.51)	Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate_Synthesis	Phenylalanine_synthesis
Prephenate dehydrogenase (EC 1.3.1.12)	Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate_Synthesis
Preprotein translocase SecY2 subunit (TC 3.A.5.1.1)	SecY2-SecA2_Specialized_Transport_System
Preprotein translocase secY subunit (TC 3.A.5.1.1)	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)	HtrA_and_Sec_secretion
Preprotein translocase subunit SecE (TC 3.A.5.1.1)	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)	HtrA_and_Sec_secretion
Preprotein translocase subunit SecG (TC 3.A.5.1.1)	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)	HtrA_and_Sec_secretion	Murein_hydrolase_regulation_and_cell_death
Preprotein translocase subunit YajC (TC 3.A.5.1.1)	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)
preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)	Purine_conversions	Queuosine-Archaeosine_Biosynthesis
Prespore specific transcriptional activator RsfA	CBSS-222523.1.peg.3937
Primosomal protein I	DNA-replication
Primosomal replication protein N	DNA-replication
Primosomal replication protein N prime prime	DNA-replication
Probable 3-phenylpropionic acid transporter	Flavohaemoglobin	Cinnamic_Acid_Degradation	Phenylpropionate_Degradation
Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase	Aromatic_amino_acid_degradation
Probable acetyl-CoA acetyltransferase FadA5 (EC 2.3.1.9)	CBSS-164757.7.peg.5020
Probable acetyl-CoA acetyltransferase FadA6 (EC 2.3.1.9)	CBSS-164757.7.peg.5020
Probable acyl-CoA dehydrogenase (EC 1.3.99.3)	Valine_degradation	Isoleucine_degradation
Probable acyl-CoA dehydrogenase FadE28 (EC 1.3.99.-)	CBSS-164757.7.peg.5020
Probable acyl-CoA dehydrogenase FadE29 (EC 1.3.99.-)	CBSS-164757.7.peg.5020
Probable ATP synthase SpaL (EC 3.6.3.14) (Invasion protein InvC)	Salmonella_invasion_locus	CBSS-243265.1.peg.3592
probable beta-D-galactosidase	Galactosylceramide_and_Sulfatide_metabolism
Probable beta-lactamase ybxI precursor (EC 3.5.2.6)	Beta-lactamase
Probable cadmium-transporting ATPase (EC 3.6.3.3)	Cobalt-zinc-cadmium_resistance
Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)	CBSS-393124.3.peg.2657
Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB)	Lipopolysaccharide_assembly
Probable Co/Zn/Cd efflux system membrane fusion protein	Cobalt-zinc-cadmium_resistance
Probable cytochrome c2	Soluble_cytochromes_and_functionally_related_electron_carriers
Probable cytochrome c-552	Soluble_cytochromes_and_functionally_related_electron_carriers
probable cytochrome oxidase (cbb3-type)	Terminal_cytochrome_C_oxidases
probable dibenzothiophene desulfurization enzyme	Alkanesulfonate_assimilation
Probable drug resistance transport protein	CBSS-1085.1.peg.1363
Probable electron transfer flavoprotein-quinone oxidoreductase FixC (EC 1.5.5.-)	Acetyl-CoA_fermentation_to_Butyrate
Probable enoyl-CoA hydratase EchA20 (EC 4.2.1.17)	CBSS-164757.7.peg.5020
Probable exported or periplasmic protein in ApbE locus	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
probable exported protein YPO3233	Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes
Probable FERULIC acid hydratase protein	Phenylpropanoid_compound_degradation
Probable FERULOYL-CoA synthetase protein	Phenylpropanoid_compound_degradation
Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Probable glutathione S-transferase (EC 2.5.1.18), YfcG homolog	Glutathione_Redox_Metabolism_3	Glutathione:_Non-redox_reactions
Probable GTPase related to EngC	Universal_GTPases
Probable hydrolase, coexpressed with pyoverdine biosynthesis regulon	Pyoverdine_biosynthesis_new
probable iron binding protein for iron-sulfur cluster assembly	Fe-S_cluster_assembly
probable iron binding protein from the HesB_IscA_SufA family	Fe-S_cluster_assembly	CBSS-316273.3.peg.922
Probable low-affinity inorganic phosphate transporter	Phosphate_metabolism
Probable monothiol glutaredoxin GrlA	Glutaredoxins
Probable NADPH:quinone reductase (EC 1.6.5.5)	CBSS-196164.1.peg.1690
Probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit	Hydrogenases
Probable outer membrane component of multidrug efflux pump	Multidrug_Resistance_Efflux_Pumps
probable periplasmic protein NMA0227	CBSS-399599.3.peg.3584
Probable peroxiredoxin (EC 1.11.1.15)	Rubrerythrin	Oxidative_stress
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)	Alginate_metabolism
Probable polyketide synthase, similar to many. e.g. gp|M63676|SERERYAA_1 S.erythraea first ORF of eryA gene, involved in complex polyketide formation in erythromycin biosynthesis.	CBSS-83332.1.peg.3803
Probable protease HtpX (EC 3.4.24.-)	CBSS-221988.1.peg.771
Probable pyridine nucleotide-disulfide oxidoreductase YkgC	Staphylococcus_aureus_hypothetical_repetitive_gene_loci
Probable pyrimidine nucleoside transport protein	CBSS-176299.3.peg.235
Probable reactivating factor for D-ornithine aminomutase	Anaerobic_Oxidative_Degradation_of_L-Ornithine
Probable RND efflux membrane fusion protein	The_mdtABCD_multidrug_resistance_cluster
probable RuBisCo-expression protein CbbX	Calvin-Benson_cycle	CO2_uptake,_carboxysome
Probable short-chain type dehydrogenase/reductase (EC 1.-.-.-)	CBSS-164757.7.peg.5020
Probable spermidine/putrescine substrate binding protein in Mollicutes	Polyamine_Metabolism
Probable thioesterase involved in non-ribosomal peptide biosynthesis, PA2411 homolog	Pyoverdine_biosynthesis_new
Probable transcriptional activator for leuABCD operon	Leucine_Biosynthesis
Probable transcriptional regulator of trehalose utilization, LuxR family	Trehalose_Uptake_and_Utilization
Probable transcription regulator Mig-14	Core_Oligosaccharide_Glycosylation_in_Pseudomonas
Probable transcription regulator protein of MDR efflux pump cluster	Multidrug_Resistance_Efflux_Pumps
Probable transmembrane protein	CBSS-216591.1.peg.168
Probable transporter in pyochelin cluster	Siderophore_pyochelin
Probable two-component sensor, near polyamine transporter	Polyamine_Metabolism
Probable valine-pyruvate aminotransferase (EC 2.6.1.66)	Alanine_biosynthesis
Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein (EC 1.14.13.-)	Phenylpropanoid_compound_degradation
Probable VANILLIN dehydrogenase oxidoreductase protein (EC 1.-.-.-)	Benzoate_degradation	Phenylpropanoid_compound_degradation
Programmed cell death antitoxin ChpS	MazEF_toxin-antitoxing_(programmed_cell_death)_system
Programmed cell death antitoxin MazE	MazEF_toxin-antitoxing_(programmed_cell_death)_system
Programmed cell death antitoxin PemI	MazEF_toxin-antitoxing_(programmed_cell_death)_system
Programmed cell death toxin ChpB	MazEF_toxin-antitoxing_(programmed_cell_death)_system
Programmed cell death toxin MazF	MazEF_toxin-antitoxing_(programmed_cell_death)_system
Programmed cell death toxin PemK	MazEF_toxin-antitoxing_(programmed_cell_death)_system
programmed frameshift-containing	Programmed_frameshift
Prokaryotic ubiquitin-like protein Pup	Proteasome_bacterial	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Proteasome_archaeal
Proline 2-methylase for pyrrolysine biosynthesis	Pyrrolysine
Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	Respiratory_dehydrogenases_1	Proline,_4-hydroxyproline_uptake_and_utilization
Proline dipeptidase (EC 3.4.13.9)	CBSS-269801.1.peg.809
Proline iminopeptidase (EC 3.4.11.5)	Proline,_4-hydroxyproline_uptake_and_utilization
Proline racemase (EC 5.1.1.4)	Proline,_4-hydroxyproline_uptake_and_utilization
Proline reductase for pyrrolysine biosynthesis	Pyrrolysine
Proline/sodium symporter PutP (TC 2.A.21.2.1)	Proline,_4-hydroxyproline_uptake_and_utilization
Proline-specific permease proY	Proline,_4-hydroxyproline_uptake_and_utilization
Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	ZZ_gjo_need_homes	Lipoprotein_Biosynthesis	CBSS-188.1.peg.9880
Prolyl-tRNA synthetase (EC 6.1.1.15)	Proline,_4-hydroxyproline_uptake_and_utilization	tRNA_aminoacylation
Prolyl-tRNA synthetase (EC 6.1.1.15), mitochondrial	tRNA_aminoacylation,_mitochondrial
Propanediol dehydratase large subunit (EC 4.2.1.28)	Propanediol_utilization
Propanediol dehydratase medium subunit (EC 4.2.1.28)	Propanediol_utilization
Propanediol dehydratase reactivation factor large subunit	Propanediol_utilization
Propanediol dehydratase reactivation factor small subunit	Propanediol_utilization
Propanediol dehydratase small subunit (EC 4.2.1.28)	Propanediol_utilization
Propanediol diffusion facilitator	Propanediol_utilization	Osmoregulation
Propanediol utilization polyhedral body protein PduA	Propanediol_utilization
Propanediol utilization polyhedral body protein PduB	Propanediol_utilization
Propanediol utilization polyhedral body protein PduJ	Propanediol_utilization
Propanediol utilization polyhedral body protein PduK	Propanediol_utilization
Propanediol utilization polyhedral body protein PduN	Propanediol_utilization
Propanediol utilization polyhedral body protein PduT	Propanediol_utilization
Propanediol utilization polyhedral body protein PduU	Propanediol_utilization
Propanediol utilization protein PduL	Propanediol_utilization
Propanediol utilization protein PduM	Propanediol_utilization
Propanediol utilization protein PduV	Propanediol_utilization
Propanediol utilization transcriptional activator	Propanediol_utilization
Prophage Clp protease-like protein	cAMP_signaling_in_bacteria
Propionate catabolism operon regulatory protein PrpR	Methylcitrate_cycle
Propionate catabolism operon transcriptional regulator of GntR family [predicted]	Methylcitrate_cycle	Propionate-CoA_to_Succinate_Module
Propionate--CoA ligase (EC 6.2.1.17)	Protein_Acetylation_and_Deacetylation_in_Bacteria	Methylcitrate_cycle	Propionate-CoA_to_Succinate_Module
Propionate kinase (EC 2.7.2.15)	Methylcitrate_cycle	Threonine_anaerobic_catabolism_gene_cluster
Propionate kinase, propanediol utilization (EC 2.7.2.1)	Propanediol_utilization
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	CBSS-83332.1.peg.3803	Serine-glyoxylate_cycle
Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3)	Propionyl-CoA_to_Succinyl-CoA_Module
Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3)	Serine-glyoxylate_cycle	Propionyl-CoA_to_Succinyl-CoA_Module
Proposed lipoate regulatory protein YbeD	Lipoic_acid_metabolism
Proposed peptidoglycan lipid II flippase MurJ	ZZ_gjo_need_homes
ProQ: influences osmotic activation of compatible solute ProP	Proline,_4-hydroxyproline_uptake_and_utilization	CBSS-221988.1.peg.771
proteasome-activating AAA-ATPase (PAN)	Proteasome_bacterial
Proteasome-activating AAA-ATPase (PAN), archaeal	Proteasome_archaeal
proteasome regulatory subunit p28	Proteasome_eukaryotic
proteasome regulatory subunit p29	Proteasome_eukaryotic
proteasome regulatory subunit Rpn1	Proteasome_eukaryotic
proteasome regulatory subunit Rpn10	Proteasome_eukaryotic
proteasome regulatory subunit Rpn11	Proteasome_eukaryotic
proteasome regulatory subunit Rpn12	Proteasome_eukaryotic
proteasome regulatory subunit Rpn13	Proteasome_eukaryotic
proteasome regulatory subunit Rpn2	Proteasome_eukaryotic
proteasome regulatory subunit Rpn3	Proteasome_eukaryotic
proteasome regulatory subunit Rpn4	Proteasome_eukaryotic
proteasome regulatory subunit Rpn5	Proteasome_eukaryotic
proteasome regulatory subunit Rpn6	Proteasome_eukaryotic
proteasome regulatory subunit Rpn7	Proteasome_eukaryotic
proteasome regulatory subunit Rpn8	Proteasome_eukaryotic
proteasome regulatory subunit Rpn9	Proteasome_eukaryotic
proteasome regulatory subunit Rpt1	Proteasome_eukaryotic
proteasome regulatory subunit Rpt2	Proteasome_eukaryotic
proteasome regulatory subunit Rpt3	Proteasome_eukaryotic
proteasome regulatory subunit Rpt4	Proteasome_eukaryotic
proteasome regulatory subunit Rpt5	Proteasome_eukaryotic
proteasome regulatory subunit Rpt6	Proteasome_eukaryotic
proteasome regulatory subunit S5b	Proteasome_eukaryotic
proteasome subunit alpha1 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit alpha2 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit alpha3 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit alpha4 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit alpha5 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit alpha6 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit alpha7 (EC 3.4.25.1)	Proteasome_eukaryotic
Proteasome subunit alpha (EC 3.4.25.1), archaeal	Proteasome_subunit_alpha_archaeal_cluster	Proteasome_archaeal
Proteasome subunit alpha (EC 3.4.25.1), bacterial	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Proteasome_archaeal
proteasome subunit beta10 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta11 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta1 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta2 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta3 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta4 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta5b (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta5 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta6 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta7 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta8 (EC 3.4.25.1)	Proteasome_eukaryotic
proteasome subunit beta9 (EC 3.4.25.1)	Proteasome_eukaryotic
Proteasome subunit beta (EC 3.4.25.1), archaeal	Proteasome_archaeal
Proteasome subunit beta (EC 3.4.25.1), bacterial	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Proteasome_archaeal
Protein acetyltransferase	Protein_Acetylation_and_Deacetylation_in_Bacteria	Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate
Protein araJ precursor	L-Arabinose_utilization
protein arginine methyltransferase type 2 (SDMA formation)	Dimethylarginine_metabolism
Protein arginine N-methyltransferase 1 (EC 2.1.1.-)	Dimethylarginine_metabolism
Proteinase activated receptor 1	Coagulation_cascade
Proteinase maturation protein (RopA)	Streptococcus_pyogenes_virulence_regulators	SpeB-SpeF_extended_regulon
Protein A, von Willebrand factor binding protein Spa	Adhesins_in_Staphylococcus
Protein BchJ, involved in reduction of C-8 vinyl of divinyl protochlorophyllide	Chlorophyll_Biosynthesis
Protein clustered with ethanolamine utilization	Ethanolamine_utilization
Protein containing plastocyanin/azurin family domain	Bacterial_hemoglobins
Protein CP12, regulation of Calvin cycle via association/dissociation of PRK/CP12/GAPDH complex	Calvin-Benson_cycle
Protein C, protease S01.218	Coagulation_cascade
Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)	HtrA_and_Sec_secretion	Glutaredoxins
Protein export cytoplasm protein SecA2 ATPase RNA helicase (TC 3.A.5.1.1)	SecY2-SecA2_Specialized_Transport_System	CBSS-393121.3.peg.2760
Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)	HtrA_and_Sec_secretion	CBSS-393121.3.peg.2760
Protein-export membrane protein secD (TC 3.A.5.1.1)	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)	HtrA_and_Sec_secretion
Protein-export membrane protein secF (TC 3.A.5.1.1)	General_secretory_pathway_(Sec-SRP)_complex_(TC_3.A.5.1.1)	HtrA_and_Sec_secretion
Protein FraG required for filament integrity and heterocyst maturation	Heterocyst_formation_in_cyanobacteria
protein from nitrogen regulatory protein P-II (GLNB) family, ortholog YAAQ B. subtilis	CBSS-393133.3.peg.2787
Protein GerPA, required for proper assembly of spore coat, mutations lead to super-dormant spore	Spore_germination
Protein GerPB, required for proper assembly of spore coat, mutations lead to super-dormant spore	Spore_germination
Protein GerPC, required for proper assembly of spore coat, mutations lead to super-dormant spore	Spore_germination
Protein GerPD, required for proper assembly of spore coat, mutations lead to super-dormant spore	Spore_germination
Protein GerPE, required for proper assembly of spore coat, mutations lead to super-dormant spore	Spore_germination
Protein GerPF, required for proper assembly of spore coat, mutations lead to super-dormant spore	Spore_germination
Protein-glutamine gamma-glutamyltransferase (EC 2.3.2.13)	Bacterial_motility:Gliding
Protein gp10 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp11 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp13 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp14 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp15 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp22 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp23 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp28 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp29 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp30 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp32 [Listeria phage 2389]	Listeria_phi-A118-like_prophages
Protein gp33 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp34 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp35 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp37 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp38 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp40 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp41 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp43 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp44 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp45 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp47, recombination-related [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp49, replication initiation [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp51 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp52 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp55 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp59 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp61 [Bacteriophage A118], similar to Listeria protein LmaD	Listeria_phi-A118-like_prophages
Protein gp63 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp65 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp66 [Bacteriophage A118], similar to Listeria protein LmaC	Listeria_phi-A118-like_prophages
Protein gp68 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp7 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp8 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein gp9 [Bacteriophage A118]	Listeria_phi-A118-like_prophages
Protein G-related alpha 2 macroglobulin-binding protein (GRAB)	Streptococcus_pyogenes_Virulome
Protein hydE	Hydrogenases
Protein ImpG/VasA	Type_VI_secretion_systems
Protein InvG precursor	Salmonella_invasion_locus
Protein involved in meta-pathway of phenol degradation	Cresol_degradation	Central_meta-cleavage_pathway_of_aromatic_compound_degradation	Phenylpropanoid_compound_degradation
Protein LiaH, similar to phage shock protein A	Bacitracin_Stress_Response
Protein LiaI	Bacitracin_Stress_Response
Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)	tRNA_modification_Archaea	CBSS-221988.1.peg.2137	Ton_and_Tol_transport_systems
Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII	Ribonuclease_H
Protein of unknown function DUF1009 clustered with KDO2-Lipid A biosynthesis genes	KDO2-Lipid_A_biosynthesis
protein of unknown function DUF1403	CBSS-203122.12.peg.188
Protein of unknown function DUF1447	Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase
Protein of unknown function DUF156	CBSS-261594.1.peg.2640
protein of unknown function DUF1612	CBSS-203122.12.peg.188
protein of unknown function DUF358	tRNA_modification_Archaea
Protein of unknown function DUF374	Lipopolysaccharide-related_cluster_in_Alphaproteobacteria
Protein of unknown function DUF414	Experimental_tye
Protein of unknown function DUF484	CBSS-323850.3.peg.3269
Protein of unknown function DUF541	CBSS-316407.3.peg.2816
Protein of unknown function DUF81	ZZ_gjo_need_homes
Protein of unknown function DUF81, SAV0084 homolog	CBSS-261594.1.peg.2640
Protein of unknown function identified by role in sporulation (SpoVG)	Sporulation_gene_orphans
Protein of unknown function Smg	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase
Protein of unknown function YceH	ZZ_gjo_need_homes
Protein PE35, involved in regulation of esxAB expression	ESAT-6_proteins_secretion_system_in_Actinobacteria
[Protein-PII] uridylyltransferase (EC 2.7.7.59)	CBSS-312309.3.peg.1965	Ammonia_assimilation
Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes	Photosystem_II-type_photosynthetic_reaction_center	Bacterial_light-harvesting_proteins
Protein PufX, involved in assembly of B875 and B800-850 pigment-protein complexes	Photosystem_II-type_photosynthetic_reaction_center
Protein QA-X	Quinate_degradation
Protein RcsF	Rcs_phosphorelay_signal_transduction_pathway	Alkylphosphonate_utilization
Protein RtcB	RNA_3'-terminal_phosphate_cyclase	tRNA_modification_Archaea
Protein serine/threonine phosphatase PrpC, regulation of stationary phase	Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase
Protein similar to glutamate synthase [NADPH] small chain, clustered with sulfite reductase	Sulfate_reduction-associated_complexes
Protein SkfG	Bacillus_Sporulation_Killing_Factor_A_Biosynthetic_Cluster
Protein SkfH	Bacillus_Sporulation_Killing_Factor_A_Biosynthetic_Cluster
Protein SseB	CBSS-316273.3.peg.227
Protein TadG, associated with Flp pilus assembly	Widespread_colonization_island
Protein VirD5 in virD operon	Plasmid-encoded_T-DNA_transfer
Protein with similarity to RtcB	RNA_3'-terminal_phosphate_cyclase	Translation_factors_bacterial
Protein YaiA	CBSS-562.2.peg.5158_SK3_including
Protein YaiI	CBSS-562.2.peg.5158_SK3_including
Protein YcgL	CBSS-243277.1.peg.4359
Protein YhjJ, putative peptidase	Inner_membrane_protein_YhjD_and_conserved_cluster_involved_in_LPS_biosynthesis
Protein YicC	CBSS-323097.3.peg.2594
Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes	Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone_Biosynthesis
Protein YkiA	CBSS-562.2.peg.5158_SK3_including
Proteorhodopsin	Proteorhodopsin
Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)	Protocatechuate_branch_of_beta-ketoadipate_pathway
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)	Protocatechuate_branch_of_beta-ketoadipate_pathway
Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8)	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)	Central_meta-cleavage_pathway_of_aromatic_compound_degradation
Proton/aspartate symport protein	ZZ_gjo_need_homes
Proton/glutamate symport protein	ZZ_gjo_need_homes
Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1)	Chlorophyll_Biosynthesis
Protoporphyrin IX Mg-chelatase subunit H (EC 6.6.1.1)	Chlorophyll_Biosynthesis
Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1)	Chlorophyll_Biosynthesis
Protoporphyrinogen IX oxidase, aerobic (EC 1.3.3.4)	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	Heme_and_Siroheme_Biosynthesis	Experimental_tye
Pro-zeta-carotene desaturase, prolycopene producing (EC 1.-.-.-)	Carotenoids
PrpF protein involved in 2-methylcitrate cycle	Methylcitrate_cycle	Propionate-CoA_to_Succinate_Module
Pseudaminic acid biosynthesis protein PseA, possible Pse5Ac7Ac acetamidino synthase	Pseudaminic_Acid_Biosynthesis
Pseudaminic acid cytidylyltransferase (EC 2.7.7.43)	Pseudaminic_Acid_Biosynthesis
Pseudaminic acid synthase (EC 4.1.3.-)	Pseudaminic_Acid_Biosynthesis
Pseudouridine 5'-phosphate glycosidase	Pseudouridine_Metabolism
Pseudouridine kinase, ribokinase/adenosine kinase/pfkB family	Pseudouridine_Metabolism
Pseudouridine synthase family protein	rRNA_modification_Bacteria	Two_cell_division_clusters_relating_to_chromosome_partitioning
Psp operon transcriptional activator	Phage_shock_protein_(psp)_operon	GABA_and_putrescine_metabolism_from_cluters
Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)	Pterin_metabolism_3	Pterin_metabolism	Pterin_carbinolamine_dehydratase	Pterin_biosynthesis
PTS system, 3-keto-L-gulonate/L-ascorbate specific IIA component (PtxA)	L-ascorbate_utilization_(and_related_gene_clusters)
PTS system, 3-keto-L-gulonate/L-ascorbate specific IIB component (SgaB)	L-ascorbate_utilization_(and_related_gene_clusters)
PTS system, 3-keto-L-gulonate/L-ascorbate specific IIC component (SgaT)	L-ascorbate_utilization_(and_related_gene_clusters)
PTS system, arbutin-, cellobiose-, and salicin-specific IIBC component (EC 2.7.1.69)	Beta-Glucoside_Metabolism
PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69)	Beta-Glucoside_Metabolism
PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69)	Beta-Glucoside_Metabolism
PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69)	Beta-Glucoside_Metabolism
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	Beta-Glucoside_Metabolism
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Beta-Glucoside_Metabolism
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	Beta-Glucoside_Metabolism
PTS system, chitobiose-specific IIA component (EC 2.7.1.69)	Chitin_and_N-acetylglucosamine_utilization
PTS system, chitobiose-specific IIB component (EC 2.7.1.69)	Chitin_and_N-acetylglucosamine_utilization
PTS system, chitobiose-specific IIC component (EC 2.7.1.69)	Chitin_and_N-acetylglucosamine_utilization
PTS system, D-allose-specific IIA component (EC 2.7.1.69)	D-allose_utilization
PTS system, D-allose-specific IIB component (EC 2.7.1.69)	D-allose_utilization
PTS system, D-allose-specific IIC component (EC 2.7.1.69)	D-allose_utilization
PTS system, fructose- and mannose-inducible IIA component (EC 2.7.1.69)	Fructose_and_Mannose_Inducible_PTS
PTS system, fructose- and mannose-inducible IIB component (EC 2.7.1.69)	Fructose_and_Mannose_Inducible_PTS
PTS system, fructose- and mannose-inducible IIC component (EC 2.7.1.69)	Fructose_and_Mannose_Inducible_PTS
PTS system, fructose- and mannose-inducible IID component (EC 2.7.1.69)	Fructose_and_Mannose_Inducible_PTS
PTS system, fructose- and mannose-inducible putative EII component	Fructose_and_Mannose_Inducible_PTS
PTS system, fructose-specific IIA component (EC 2.7.1.69)	Fructose_utilization
PTS system, fructose-specific IIB component (EC 2.7.1.69)	Fructose_utilization
PTS system, fructose-specific IIC component (EC 2.7.1.69)	Fructose_utilization
PTS system, galactitol-specific IIA component (EC 2.7.1.69)	D-Tagatose_and_Galactitol_Utilization
PTS system, galactitol-specific IIB component (EC 2.7.1.69)	D-Tagatose_and_Galactitol_Utilization
PTS system, galactitol-specific IIC component (EC 2.7.1.69)	D-Tagatose_and_Galactitol_Utilization
PTS system, galactosamine-specific IIB component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
PTS system, galactosamine-specific IIC component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
PTS system, galactosamine-specific IID component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
PTS system, galactose-inducible IIA component (EC 2.7.1.69)	Galactose-inducible_PTS
PTS system, galactose-inducible IIB component (EC 2.7.1.69) / PTS system, galactose-inducible IIC component (EC 2.7.1.69)	Galactose-inducible_PTS
PTS system, galactose-specific IIA component (EC 2.7.1.69)	Lactose_and_Galactose_Uptake_and_Utilization
PTS system, galactose-specific IIB component (EC 2.7.1.69)	Lactose_and_Galactose_Uptake_and_Utilization
PTS system, galactose-specific IIC component (EC 2.7.1.69)	Lactose_and_Galactose_Uptake_and_Utilization
PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
PTS system, glucose-specific IIA component (EC 2.7.1.69)	Trehalose_Uptake_and_Utilization
PTS system, glucose-specific IIBC component (EC 2.7.1.69)	Sucrose_Metabolism
PTS system, glucose-specific IIB component (EC 2.7.1.69)	Trehalose_Uptake_and_Utilization
PTS system, glucose-specific IIC component (EC 2.7.1.69)	Trehalose_Uptake_and_Utilization
PTS system, lactose-specific IIA component (EC 2.7.1.69)	Lactose_and_Galactose_Uptake_and_Utilization
PTS system, lactose-specific IIB component (EC 2.7.1.69)	Lactose_and_Galactose_Uptake_and_Utilization
PTS system, lactose-specific IIC component (EC 2.7.1.69)	Lactose_and_Galactose_Uptake_and_Utilization
PTS system, maltose and glucose-specific IIA component (EC 2.7.1.69)	Maltose_and_Maltodextrin_Utilization
PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69)	Maltose_and_Maltodextrin_Utilization
PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69)	Maltose_and_Maltodextrin_Utilization
PTS system, mannitol-specific cryptic IIA component (EC 2.7.1.69)	Mannitol_Utilization
PTS system, mannitol-specific cryptic IIB component (EC 2.7.1.69)	Mannitol_Utilization
PTS system, mannitol-specific cryptic IIC component (EC 2.7.1.69)	Mannitol_Utilization
PTS system, mannitol-specific IIA component (EC 2.7.1.69)	Mannitol_Utilization
PTS system, mannitol-specific IIB component (EC 2.7.1.69)	Mannitol_Utilization
PTS system, mannitol-specific IIC component (EC 2.7.1.69)	Mannitol_Utilization
PTS system, mannose-specific IIA component (EC 2.7.1.69)	Sialic_Acid_Metabolism	Mannose_Metabolism
PTS system, mannose-specific IIB component (EC 2.7.1.69)	Sialic_Acid_Metabolism	Mannose_Metabolism
PTS system, mannose-specific IIC component (EC 2.7.1.69)	Sialic_Acid_Metabolism	Mannose_Metabolism
PTS system, mannose-specific IID component (EC 2.7.1.69)	Sialic_Acid_Metabolism	Mannose_Metabolism
PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)	N-Acetyl-Galactosamine_and_Galactosamine_Utilization
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	Chitin_and_N-acetylglucosamine_utilization	Sialic_Acid_Metabolism
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	Chitin_and_N-acetylglucosamine_utilization	Sialic_Acid_Metabolism
PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Chitin_and_N-acetylglucosamine_utilization	Sialic_Acid_Metabolism
PTS system, N-acetylmuramic acid-specific IIB component (EC 2.7.1.69)	Sialic_Acid_Metabolism
PTS system, N-acetylmuramic acid-specific IIC component (EC 2.7.1.69)	Sialic_Acid_Metabolism
PTS system, sorbose-specific IIA component (EC 2.7.1.69)	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
PTS system, sorbose-specific IIB component (EC 2.7.1.69)	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
PTS system, sorbose-specific IIC component (EC 2.7.1.69)	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
PTS system, sorbose-specific IID component (EC 2.7.1.69)	D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization
PTS system, sucrose-specific IIA component (EC 2.7.1.69)	Sucrose_utilization
PTS system, sucrose-specific IIB component (EC 2.7.1.69)	Sucrose_utilization
PTS system, sucrose-specific IIB component (EC 2.7.1.69) / PTS system, sucrose-specific IIC component (EC 2.7.1.69) / PTS system, sucrose-specific IIA component (EC 2.7.1.69)	Sucrose-specific_PTS
PTS system, sucrose-specific IIC component (EC 2.7.1.69)	Sucrose_utilization
PTS system, tagatose-specific IIA-TPr component (EC 2.7.1.69)	D-Tagatose_and_Galactitol_Utilization
PTS system, tagatose-specific IIBC component (EC 2.7.1.69)	D-Tagatose_and_Galactitol_Utilization
PTS system, trehalose-specific IIA component (EC 2.7.1.69)	Trehalose_Uptake_and_Utilization
PTS system, trehalose-specific IIB component (EC 2.7.1.69)	Trehalose_Uptake_and_Utilization
PTS system, trehalose-specific IIC component (EC 2.7.1.69)	Trehalose_Uptake_and_Utilization
PUA-PAPS reductase like fusion	tRNA_modification_Archaea
puatative hemin transporter subunit	Putative_hemin_transporter
Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'	Proteasome_bacterial	Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Proteasome_archaeal
Pup ligase PafA, possible component of postulated heterodimer PafA-PafA'	Proteasome_archaeal
Purine cyclase-related protein	cAMP_signaling_in_bacteria
Purine nucleoside phosphorylase (EC 2.4.2.1)	Deoxyribose_and_Deoxynucleoside_Catabolism	pyrimidine_conversions	Purine_conversions	Adenosyl_nucleosidases
Purine trans deoxyribosylase (Nucleoside deoxyribosyltransferase-I) (EC 2.4.2.6)	pyrimidine_conversions	Purine_conversions
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	Aromatic_amino_acid_degradation
Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis	Coenzyme_B12_biosynthesis
Putative 2-keto-3-deoxygluconate kinase (EC 2.7.1.45)	L-ascorbate_utilization_(and_related_gene_clusters)
Putative 3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase oxidoreductase protein (EC 1.1.1.50)	Phenylpropanoid_compound_degradation
Putative 3-hydroxyacyl-coa dehydrogenase	n-Phenylalkanoic_acid_degradation	Polyhydroxybutyrate_metabolism
putative 3-hydroxyphenylpropionic acid porine	Phenylpropanoid_compound_degradation
putative 4-hydroxybenzoyl-CoA thioesterase	Salicylate_and_gentisate_catabolism	Gentisare_degradation
Putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase oxidoreductase protein (EC 1.2.1.60)	Aromatic_amino_acid_degradation
Putative ABC transporter ATP-binding protein, spy1790 homolog	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Putative ABC transporter (ATP-binding protein), spy1791 homolog	Heme,_hemin_uptake_and_utilization_systems_in_GramPositives
Putative ABC transporter of substrate X, ATP-binding subunit	ABC_transporter_of_unknown_substrate_X
Putative ABC transporter of substrate X, permease subunit I	ABC_transporter_of_unknown_substrate_X
Putative ABC transporter of substrate X, permease subunit II	ABC_transporter_of_unk