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Revision 1.31 - (view) (download) (annotate) - [select for diffs]
Fri Aug 17 23:17:11 2012 UTC (7 years, 3 months ago) by golsen
Branch: MAIN
CVS Tags: HEAD, rast_rel_2014_0729, rast_rel_2014_0912
Changes since 1.30: +14 -13 lines
Diff to previous 1.30
Get rid of error log message for missing ec2go file.

Revision 1.30 - (view) (download) (annotate) - [select for diffs]
Tue Sep 16 18:22:29 2008 UTC (11 years, 2 months ago) by parrello
Branch: MAIN
CVS Tags: mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_rel_2008_0625, mgrast_rel_2008_0917, mgrast_rel_2008_0919, mgrast_rel_2008_0923, mgrast_rel_2008_0924, mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, myrast_rel40, rast_2008_0924, rast_rel_2008_09_29, rast_rel_2008_09_30, rast_rel_2008_10_09, rast_rel_2008_10_29, rast_rel_2008_11_24, rast_rel_2008_12_18, rast_rel_2009_02_05, rast_rel_2009_03_26, rast_rel_2009_05_18, rast_rel_2009_07_09, rast_rel_2009_0925, rast_rel_2010_0118, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119, rast_rel_2011_0928, rast_release_2008_09_29
Changes since 1.29: +3 -1 lines
Diff to previous 1.29
Changed to use the SEED Viewer if invoked in NMPDR mode.

Revision 1.29 - (view) (download) (annotate) - [select for diffs]
Tue Apr 29 08:04:49 2008 UTC (11 years, 6 months ago) by parrello
Branch: MAIN
CVS Tags: mgrast_rel_2008_0806, rast_rel_2008_06_16, rast_rel_2008_06_18, rast_rel_2008_07_21, rast_rel_2008_08_07
Changes since 1.28: +1 -1 lines
Diff to previous 1.28
Fixed to use new NMPDR mode protocol.

Revision 1.28 - (view) (download) (annotate) - [select for diffs]
Sat Oct 6 16:24:44 2007 UTC (12 years, 1 month ago) by overbeek
Branch: MAIN
CVS Tags: rast_rel_2008_04_23
Changes since 1.27: +2 -0 lines
Diff to previous 1.27
fix to display_subsys.cgi when focus is on an incomplete genome

Revision 1.27 - (view) (download) (annotate) - [select for diffs]
Mon Oct 1 12:58:42 2007 UTC (12 years, 1 month ago) by overbeek
Branch: MAIN
Changes since 1.26: +126 -4 lines
Diff to previous 1.26
changes to display_subsys.cgi

Revision 1.26 - (view) (download) (annotate) - [select for diffs]
Tue Mar 20 23:06:40 2007 UTC (12 years, 8 months ago) by hwang
Branch: MAIN
Changes since 1.25: +15 -6 lines
Diff to previous 1.25
Fix bug of 1 literature doesn't show up

Revision 1.25 - (view) (download) (annotate) - [select for diffs]
Mon Mar 19 21:21:39 2007 UTC (12 years, 8 months ago) by hwang
Branch: MAIN
Changes since 1.24: +15 -1 lines
Diff to previous 1.24
Added files to display and show precomputed literature for functional roles within subsystem

Revision 1.24 - (view) (download) (annotate) - [select for diffs]
Thu Nov 30 22:59:09 2006 UTC (12 years, 11 months ago) by parrello
Branch: MAIN
Changes since 1.23: +1 -1 lines
Diff to previous 1.23
Fixed a bad parameter on the scrolling boxes.

Revision 1.23 - (view) (download) (annotate) - [select for diffs]
Wed Nov 29 15:19:19 2006 UTC (12 years, 11 months ago) by olson
Branch: MAIN
Changes since 1.22: +31 -2 lines
Diff to previous 1.22
Rollup commit of 48hr changes.

Added add_virtual_genome to Subsystem.pm to support UnvSubsys doing
the right thing when handed a FIGV.

Added propagation of 48hr_job thru the various link generation scripts in order for protein.cgi/display_subsys.cgi
to properly show virtual genomes.

Revision 1.22 - (view) (download) (annotate) - [select for diffs]
Sun Oct 22 05:09:46 2006 UTC (13 years, 1 month ago) by parrello
Branch: MAIN
Changes since 1.21: +7 -4 lines
Diff to previous 1.21
Changed to turn off the excel checkbox in Sprout mode.

Revision 1.21 - (view) (download) (annotate) - [select for diffs]
Tue Oct 17 18:47:49 2006 UTC (13 years, 1 month ago) by parrello
Branch: MAIN
Changes since 1.20: +1 -9 lines
Diff to previous 1.20
Converted to new tracing system.

Revision 1.20 - (view) (download) (annotate) - [select for diffs]
Sat Oct 7 22:37:33 2006 UTC (13 years, 1 month ago) by parrello
Branch: MAIN
Changes since 1.19: +2 -1 lines
Diff to previous 1.19
Fixed the Show form to stay inside the NMPDR.

Revision 1.19 - (view) (download) (annotate) - [select for diffs]
Wed Aug 30 17:19:29 2006 UTC (13 years, 2 months ago) by paczian
Branch: MAIN
Changes since 1.18: +1 -0 lines
Diff to previous 1.18
added a line to include FIG.js into the page so popup tooltips work again

Revision 1.18 - (view) (download) (annotate) - [select for diffs]
Thu Aug 10 07:31:59 2006 UTC (13 years, 3 months ago) by parrello
Branch: MAIN
Changes since 1.17: +90 -78 lines
Diff to previous 1.17
Converted to the NMPDR look and feel.

Revision 1.17 - (view) (download) (annotate) - [select for diffs]
Tue Aug 1 15:35:32 2006 UTC (13 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.16: +7 -4 lines
Diff to previous 1.16
Remove links that do not have GO terms

Revision 1.16 - (view) (download) (annotate) - [select for diffs]
Tue Aug 1 02:15:33 2006 UTC (13 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.15: +2 -1 lines
Diff to previous 1.15
Added GO term (description)

Revision 1.15 - (view) (download) (annotate) - [select for diffs]
Tue Aug 1 01:29:57 2006 UTC (13 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.14: +30 -3 lines
Diff to previous 1.14
Added Folker's changes of GO terms in display_subsys.cgi

Revision 1.14 - (view) (download) (annotate) - [select for diffs]
Mon Jun 19 21:19:22 2006 UTC (13 years, 5 months ago) by overbeek
Branch: MAIN
Changes since 1.13: +9 -11 lines
Diff to previous 1.13
RAE: Simplifying making excel tables

Revision 1.13 - (view) (download) (annotate) - [select for diffs]
Wed Jun 14 01:14:19 2006 UTC (13 years, 5 months ago) by overbeek
Branch: MAIN
Changes since 1.12: +21 -5 lines
Diff to previous 1.12
RAE: Adding excel files to display_subsys

Revision 1.12 - (view) (download) (annotate) - [select for diffs]
Tue Mar 14 12:31:46 2006 UTC (13 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.11: +24 -19 lines
Diff to previous 1.11
correct subset handling in display of subsystems

Revision 1.11 - (view) (download) (annotate) - [select for diffs]
Thu Dec 8 18:16:12 2005 UTC (13 years, 11 months ago) by parrello
Branch: MAIN
CVS Tags: caBIG-05Apr06-00, caBIG-13Feb06-00
Changes since 1.10: +5 -2 lines
Diff to previous 1.10
Fixed so that Sprout is used for the data when SPROUT=1 is specified in the URL.

Revision 1.10 - (view) (download) (annotate) - [select for diffs]
Mon Dec 5 19:12:12 2005 UTC (13 years, 11 months ago) by olson
Branch: MAIN
Changes since 1.9: +17 -0 lines
Diff to previous 1.9
add license words

Revision 1.9 - (view) (download) (annotate) - [select for diffs]
Mon Nov 28 23:25:14 2005 UTC (13 years, 11 months ago) by parrello
Branch: MAIN
Changes since 1.8: +28 -15 lines
Diff to previous 1.8
Added the ability to specify tracing options using "Trace=" in the URL. Trace messages are queued during processing and displayed at the bottom of the page.

Revision 1.8 - (view) (download) (annotate) - [select for diffs]
Mon Nov 28 22:47:48 2005 UTC (13 years, 11 months ago) by parrello
Branch: MAIN
Changes since 1.7: +41 -1 lines
Diff to previous 1.7
Added diagram sujpport.
Added trace messages.

Revision 1.7 - (view) (download) (annotate) - [select for diffs]
Wed Nov 23 18:36:42 2005 UTC (14 years ago) by parrello
Branch: MAIN
Changes since 1.6: +303 -304 lines
Diff to previous 1.6
Converted tabs to spaces.

Revision 1.6 - (view) (download) (annotate) - [select for diffs]
Tue Sep 20 16:58:48 2005 UTC (14 years, 2 months ago) by overbeek
Branch: MAIN
CVS Tags: caBIG-00-00-00
Changes since 1.5: +5 -2 lines
Diff to previous 1.5
add ability to invoke display_subsys.cgi with colored pegs

Revision 1.5 - (view) (download) (annotate) - [select for diffs]
Sun Sep 18 14:11:22 2005 UTC (14 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.4: +17 -8 lines
Diff to previous 1.4
fixes on showing subsystems

Revision 1.4 - (view) (download) (annotate) - [select for diffs]
Sun Sep 18 01:20:28 2005 UTC (14 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.3: +89 -2 lines
Diff to previous 1.3
fixes to display_subsys.cgi

Revision 1.3 - (view) (download) (annotate) - [select for diffs]
Mon Sep 12 20:45:51 2005 UTC (14 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.2: +1 -51 lines
Diff to previous 1.2
first real version of display_subsys.cgi

Revision 1.2 - (view) (download) (annotate) - [select for diffs]
Mon Sep 12 14:53:13 2005 UTC (14 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.1: +29 -138 lines
Diff to previous 1.1
display_subsys.cgi that works

Revision 1.1 - (view) (download) (annotate) - [select for diffs]
Mon Sep 12 02:39:37 2005 UTC (14 years, 2 months ago) by overbeek
Branch: MAIN
commit incomplete, bug ridden display_subsys.cgi

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