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Revision 1.81 - (view) (download) (as text) (annotate) - [select for diffs]
Mon May 4 08:24:04 2009 UTC (10 years, 10 months ago) by paczian
Branch: MAIN
CVS Tags: mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, myrast_33, rast_rel_2009_05_18, rast_rel_2009_07_09, rast_rel_2009_0925, rast_rel_2010_0118, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119
Changes since 1.80: +1 -1 lines
Diff to previous 1.80
added check for existance of AliTree object in line 1399 to avoid calling method on uninitialized

Revision 1.80 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Oct 29 16:05:29 2008 UTC (11 years, 5 months ago) by wilke
Branch: MAIN
CVS Tags: mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, rast_rel_2008_11_24, rast_rel_2008_12_18, rast_rel_2009_02_05, rast_rel_2009_03_26
Changes since 1.79: +1 -1 lines
Diff to previous 1.79
changed to, display button even if no aliases are found

Revision 1.79 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 3 20:37:29 2008 UTC (11 years, 6 months ago) by parrello
Branch: MAIN
CVS Tags: mgrast_rel_2008_0625, mgrast_rel_2008_0917, mgrast_rel_2008_0919, mgrast_rel_2008_0923, mgrast_rel_2008_0924, rast_2008_0924, rast_rel_2008_09_29, rast_rel_2008_09_30, rast_rel_2008_10_09, rast_rel_2008_10_29, rast_release_2008_09_29
Changes since 1.78: +1 -0 lines
Diff to previous 1.78
Added a trace message.

Revision 1.78 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Aug 23 23:39:22 2008 UTC (11 years, 7 months ago) by golsen
Branch: MAIN
Changes since 1.77: +11 -8 lines
Diff to previous 1.77
Move writing of assignment annotation from a case-by-case basis (and it
was missing in several key places) to the FIG::assign_function.

Modify the code in each of the calling locations to not make duplicate
annotations.

At the same time, remove (most) of the instances of making different
calls to assign_function depending on the user name.  assign_function
treats everyone as master (but writes an annotation with the real user
name).

Revision 1.77 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jun 11 17:06:23 2008 UTC (11 years, 9 months ago) by parrello
Branch: MAIN
CVS Tags: mgrast_rel_2008_0806, rast_rel_2008_08_07
Changes since 1.76: +2 -2 lines
Diff to previous 1.76
Changed PUBMED link to open in new tab or window.

Revision 1.76 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jun 11 16:54:26 2008 UTC (11 years, 9 months ago) by parrello
Branch: MAIN
Changes since 1.75: +2 -0 lines
Diff to previous 1.75
DLIT and ILIT evidence codes in the table will now link to PUBMED.

Revision 1.75 - (view) (download) (as text) (annotate) - [select for diffs]
Wed May 28 17:42:16 2008 UTC (11 years, 10 months ago) by parrello
Branch: MAIN
CVS Tags: rast_rel_2008_06_16, rast_rel_2008_06_18
Changes since 1.74: +1 -1 lines
Diff to previous 1.74
Fixed boundaries_of call so it works in Sprout.

Revision 1.74 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Apr 29 07:57:18 2008 UTC (11 years, 11 months ago) by parrello
Branch: MAIN
CVS Tags: rast_rel_2008_07_21
Changes since 1.73: +3 -4 lines
Diff to previous 1.73
Added tracing.

Revision 1.73 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 16 22:12:48 2008 UTC (11 years, 11 months ago) by overbeek
Branch: MAIN
CVS Tags: rast_rel_2008_04_23
Changes since 1.72: +1 -1 lines
Diff to previous 1.72
no literature for PEGs without aliases

Revision 1.72 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Mar 26 20:41:47 2008 UTC (12 years ago) by disz
Branch: MAIN
Changes since 1.71: +3 -6 lines
Diff to previous 1.71
Added explanation for using java tree

Revision 1.71 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Mar 25 18:57:07 2008 UTC (12 years ago) by disz
Branch: MAIN
Changes since 1.70: +15 -2 lines
Diff to previous 1.70
Addition for Fancy Tree based annotation

Revision 1.70 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Feb 18 16:56:06 2008 UTC (12 years, 1 month ago) by olson
Branch: MAIN
Changes since 1.69: +1 -1 lines
Diff to previous 1.69
Fix links in compared regions

Revision 1.69 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Feb 15 22:35:40 2008 UTC (12 years, 1 month ago) by dsouza
Branch: MAIN
Changes since 1.68: +194 -29 lines
Diff to previous 1.68
Changed compare regions to use PinnedRegions module.

Revision 1.68 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Feb 5 21:45:22 2008 UTC (12 years, 1 month ago) by parrello
Branch: MAIN
Changes since 1.67: +1 -0 lines
Diff to previous 1.67
Fixed to put spaces between the aliases in the display, allowing the table cell to wrap.

Revision 1.67 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jan 2 01:45:39 2008 UTC (12 years, 2 months ago) by golsen
Branch: MAIN
Changes since 1.66: +4 -12 lines
Diff to previous 1.66
Change the implimentation of the similarities navigation buttons
'previous PEG' and 'next PEG' so that they really work on location
information.  Uses new next_feature() and previous_feature() functions
added to FIG.pm.

Revision 1.66 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Dec 28 18:43:07 2007 UTC (12 years, 3 months ago) by golsen
Branch: MAIN
Changes since 1.65: +1 -1 lines
Diff to previous 1.65
Remove a leading zero from similarity E-value exponents of form e-0\d\d.

Revision 1.65 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 20 21:50:45 2007 UTC (12 years, 3 months ago) by dsouza
Branch: MAIN
Changes since 1.64: +8 -0 lines
Diff to previous 1.64
Added link to SeedViewer annotation page so annotators can compare
compared regions display.

Revision 1.64 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 6 14:25:20 2007 UTC (12 years, 3 months ago) by parrello
Branch: MAIN
Changes since 1.63: +349 -338 lines
Diff to previous 1.63
Changed to use new nmpdr_mode method.

Revision 1.63 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Oct 23 03:23:27 2007 UTC (12 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.62: +6 -2 lines
Diff to previous 1.62
Add support for new peg.synonyms entries.

Revision 1.62 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Oct 5 18:33:12 2007 UTC (12 years, 5 months ago) by overbeek
Branch: MAIN
Changes since 1.61: +1 -0 lines
Diff to previous 1.61
add check_variants.cgi, a program to automatically validate variant codes

Revision 1.61 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Sep 29 03:58:17 2007 UTC (12 years, 6 months ago) by overbeek
Branch: MAIN
Changes since 1.60: +6 -10 lines
Diff to previous 1.60
fixes to display on protein page, alternative formats for alignments and trees in fid_checked.cgi

Revision 1.60 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 25 21:22:36 2007 UTC (12 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.59: +4 -1 lines
Diff to previous 1.59
Fix context display when fc_pegs  table missing and server is using pch server.

Filter deleted pegs from sims display.

Revision 1.59 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jul 23 19:56:17 2007 UTC (12 years, 8 months ago) by parrello
Branch: MAIN
Changes since 1.58: +93 -46 lines
Diff to previous 1.58
Changed compare-regions so it runs faster in NMPDR.

Revision 1.58 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jul 17 16:44:11 2007 UTC (12 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.57: +3 -1 lines
Diff to previous 1.57
enhance message relating to tree-based annotation

Revision 1.57 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jul 15 12:49:07 2007 UTC (12 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.56: +1 -0 lines
Diff to previous 1.56
prevent generation of trees in access to protein.cgi

Revision 1.56 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Jul 15 04:08:16 2007 UTC (12 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.55: +21 -0 lines
Diff to previous 1.55
allow acces to alignment library from protein page

Revision 1.55 - (view) (download) (as text) (annotate) - [select for diffs]
Tue May 8 03:19:46 2007 UTC (12 years, 10 months ago) by overbeek
Branch: MAIN
Changes since 1.54: +3 -2 lines
Diff to previous 1.54
fix Protein.pm so that sRNA will show

Revision 1.54 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Apr 27 21:11:35 2007 UTC (12 years, 11 months ago) by paczian
Branch: MAIN
Changes since 1.53: +1 -1 lines
Diff to previous 1.53
get_current_assignment now does a global replace of EC-number to link

Revision 1.53 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 12 06:07:30 2007 UTC (12 years, 11 months ago) by parrello
Branch: MAIN
Changes since 1.52: +3 -7 lines
Diff to previous 1.52
Switched compare regions to use sims for Sprout instead of BBHs. Changed annotation links to show the display links even if there is no user.

Revision 1.52 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 12 02:13:37 2007 UTC (12 years, 11 months ago) by golsen
Branch: MAIN
Changes since 1.51: +32 -23 lines
Diff to previous 1.51
Alter the display of functions in the protein similarities page so that
role separated by / are displayed side-by-side.

Revision 1.51 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 12 00:47:54 2007 UTC (12 years, 11 months ago) by golsen
Branch: MAIN
Changes since 1.50: +71 -36 lines
Diff to previous 1.50
Change the coloring of functions in the protein page similarities table,
and the fid_checked page phylogenetic tree to match the individual roles,
rather than the function as a whole.  This will give features with multiple
roles separate colores for each role.  It will also make assignments with
different comments match, so long as the role is the same.

(Also added another pallet with more colors.)

Revision 1.50 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Feb 5 16:22:02 2007 UTC (13 years, 1 month ago) by overbeek
Branch: MAIN
Changes since 1.49: +1 -1 lines
Diff to previous 1.49
commit hacked feature.cgi

Revision 1.49 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Feb 3 02:59:15 2007 UTC (13 years, 1 month ago) by overbeek
Branch: MAIN
Changes since 1.48: +2 -1 lines
Diff to previous 1.48
fix portraying binding sites as black rectangles

Revision 1.48 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Feb 3 02:50:49 2007 UTC (13 years, 1 month ago) by overbeek
Branch: MAIN
Changes since 1.47: +2 -6 lines
Diff to previous 1.47
fixes to add_features and display of non-peg features

Revision 1.47 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Feb 2 19:48:28 2007 UTC (13 years, 1 month ago) by overbeek
Branch: MAIN
Changes since 1.46: +94 -85 lines
Diff to previous 1.46
handle regulatory sites - bs - properly

Revision 1.46 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jan 24 18:38:39 2007 UTC (13 years, 2 months ago) by paczian
Branch: MAIN
Changes since 1.45: +28 -26 lines
Diff to previous 1.45
fixed cgi object passing bug

Revision 1.45 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jan 18 03:08:57 2007 UTC (13 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.44: +4 -1 lines
Diff to previous 1.44
add comments to functions

Revision 1.44 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Nov 29 20:59:44 2006 UTC (13 years, 4 months ago) by olson
Branch: MAIN
Changes since 1.43: +4 -2 lines
Diff to previous 1.43
Add FIGV support for peg/subsystem indexing.

Revision 1.43 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Nov 29 15:19:19 2006 UTC (13 years, 4 months ago) by olson
Branch: MAIN
Changes since 1.42: +8 -3 lines
Diff to previous 1.42
Rollup commit of 48hr changes.

Added add_virtual_genome to Subsystem.pm to support UnvSubsys doing
the right thing when handed a FIGV.

Added propagation of 48hr_job thru the various link generation scripts in order for protein.cgi/display_subsys.cgi
to properly show virtual genomes.

Revision 1.42 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Nov 19 15:12:46 2006 UTC (13 years, 4 months ago) by paczian
Branch: MAIN
Changes since 1.41: +2 -17 lines
Diff to previous 1.41
moved 'evidence_codes_explain' to HTML.pm as requested

Revision 1.41 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Nov 15 03:28:40 2006 UTC (13 years, 4 months ago) by parrello
Branch: MAIN
Changes since 1.40: +1 -1 lines
Diff to previous 1.40
Fixed so that only real URLs will generate hyperlinks for attributes.

Revision 1.40 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Nov 6 19:45:39 2006 UTC (13 years, 4 months ago) by parrello
Branch: MAIN
Changes since 1.39: +4 -7 lines
Diff to previous 1.39
Fixed the pubmed_url bug in which no result was returned for SEED pages which have a SPROUT parameter.

Revision 1.39 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Oct 2 03:08:17 2006 UTC (13 years, 6 months ago) by parrello
Branch: MAIN
Changes since 1.38: +10 -3 lines
Diff to previous 1.38
Added a show/hide button for BBHs.

Revision 1.38 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Sep 18 22:12:05 2006 UTC (13 years, 6 months ago) by paczian
Branch: MAIN
Changes since 1.37: +7 -0 lines
Diff to previous 1.37
added shading for locked fids

Revision 1.37 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Sep 18 21:12:21 2006 UTC (13 years, 6 months ago) by overbeek
Branch: MAIN
Changes since 1.36: +4 -1 lines
Diff to previous 1.36
spiff up the lock/unlock stuff

Revision 1.36 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Sep 15 02:26:25 2006 UTC (13 years, 6 months ago) by hwang
Branch: MAIN
Changes since 1.35: +2 -2 lines
Diff to previous 1.35
Fix text to Literature

Revision 1.35 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Sep 14 23:04:25 2006 UTC (13 years, 6 months ago) by hwang
Branch: MAIN
Changes since 1.34: +2 -2 lines
Diff to previous 1.34
Per leslie's request, change Get Pubmed to Literature

Revision 1.34 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 13 21:30:11 2006 UTC (13 years, 6 months ago) by hwang
Branch: MAIN
Changes since 1.33: +11 -1 lines
Diff to previous 1.33
If it is Sprout version, a read-only version for literature curation is shown

Revision 1.33 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 12 20:20:40 2006 UTC (13 years, 6 months ago) by paczian
Branch: MAIN
Changes since 1.32: +45 -27 lines
Diff to previous 1.32
the sequence displayed in dna_sequence_adjacent was incorrect. This has been fixed.

Revision 1.32 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Sep 8 20:40:31 2006 UTC (13 years, 6 months ago) by hwang
Branch: MAIN
Changes since 1.31: +18 -12 lines
Diff to previous 1.31
Changed literature button to go to the appropriate site

Revision 1.31 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 5 23:17:35 2006 UTC (13 years, 6 months ago) by paczian
Branch: MAIN
Changes since 1.30: +1 -1 lines
Diff to previous 1.30
reverted the looks of the cells on the Protein page containing the evidence codes to the old version

Revision 1.30 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 5 16:57:24 2006 UTC (13 years, 6 months ago) by paczian
Branch: MAIN
Changes since 1.29: +16 -6 lines
Diff to previous 1.29
updated evidence_codes to comply to old and new version of evidence codes attributes

Revision 1.29 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 24 22:59:22 2006 UTC (13 years, 7 months ago) by parrello
Branch: MAIN
Changes since 1.28: +4 -3 lines
Diff to previous 1.28
Changed title stuff to show RNA for RNA pages.

Revision 1.28 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Aug 21 18:41:13 2006 UTC (13 years, 7 months ago) by paczian
Branch: MAIN
Changes since 1.27: +4 -1 lines
Diff to previous 1.27
modified get_dna_sequence adjacent
the regular expression coloring the sequence could not take more than 32766 characters. It was replaced by substr

Revision 1.27 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Aug 14 16:12:50 2006 UTC (13 years, 7 months ago) by paczian
Branch: MAIN
Changes since 1.26: +1672 -1833 lines
Diff to previous 1.26
introduced hash returns to functions

Revision 1.26 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Aug 4 20:03:53 2006 UTC (13 years, 7 months ago) by paczian
Branch: MAIN
Changes since 1.25: +5 -8 lines
Diff to previous 1.25
fix a bug in the calculation of row entries when no username was given

Revision 1.25 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Aug 4 03:28:05 2006 UTC (13 years, 7 months ago) by parrello
Branch: MAIN
Changes since 1.24: +1 -1 lines
Diff to previous 1.24
Fixed missing SPROUT=1 on the compare regions.

Revision 1.24 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 3 05:57:27 2006 UTC (13 years, 7 months ago) by parrello
Branch: MAIN
Changes since 1.23: +8 -8 lines
Diff to previous 1.23
Removed annotation links from Sprout protein page.

Revision 1.23 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 3 05:27:51 2006 UTC (13 years, 7 months ago) by parrello
Branch: MAIN
Changes since 1.22: +219 -3 lines
Diff to previous 1.22
Fixed compare_regions and BBHs.

Revision 1.22 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 3 02:59:24 2006 UTC (13 years, 7 months ago) by parrello
Branch: MAIN
Changes since 1.21: +1 -2 lines
Diff to previous 1.21
Fixed a bug in the Sprout similarities component.

Revision 1.21 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Jul 29 05:13:31 2006 UTC (13 years, 8 months ago) by parrello
Branch: MAIN
Changes since 1.20: +1 -1 lines
Diff to previous 1.20
Fixed a bad anchor tag.

Revision 1.20 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jul 28 21:49:34 2006 UTC (13 years, 8 months ago) by golsen
Branch: MAIN
Changes since 1.19: +34 -22 lines
Diff to previous 1.19
A few more cosmetic changes in protein page:
  Help is now all on right margin.
  Got rid of empty table column on sims without aliases (I'm not sure
     when that got added).
  Added contig length to context view.

Fixed logic error in get_region_data error trapping (error return was -1,
     but test was for 0).

Revision 1.19 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jul 28 20:20:00 2006 UTC (13 years, 8 months ago) by paczian
Branch: MAIN
Changes since 1.18: +1 -6 lines
Diff to previous 1.18
There was a quoting error in the method rgb2html, fixed it.

Revision 1.18 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jul 28 19:57:50 2006 UTC (13 years, 8 months ago) by golsen
Branch: MAIN
Changes since 1.17: +18 -11 lines
Diff to previous 1.17
Several minor changes in protein page layout.
Function in the context table is now called "Function", not "comment".
Some typo fixes in displayed text.
Remove link from organism name to NCBI (there is no way for users
to guess where the link will go, and the link to NCBI is clearly provied
two lines below).

Revision 1.17 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jul 28 02:14:32 2006 UTC (13 years, 8 months ago) by parrello
Branch: MAIN
Changes since 1.16: +5 -17 lines
Diff to previous 1.16
Converted for NMPDR compatability.

Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jul 26 21:11:31 2006 UTC (13 years, 8 months ago) by paczian
Branch: MAIN
Changes since 1.15: +44 -1 lines
Diff to previous 1.15
added method get_annotation links

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jul 25 22:00:54 2006 UTC (13 years, 8 months ago) by hwang
Branch: MAIN
Changes since 1.14: +1 -1 lines
Diff to previous 1.14
Make the journal button "Use GI ID to get PubMed journals"

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jul 25 21:06:42 2006 UTC (13 years, 8 months ago) by parrello
Branch: MAIN
Changes since 1.13: +33 -0 lines
Diff to previous 1.13
Added missing sims-form method.

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jul 25 20:48:32 2006 UTC (13 years, 8 months ago) by hwang
Branch: MAIN
Changes since 1.12: +25 -7 lines
Diff to previous 1.12
added documentation to protein.pm

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jul 25 20:43:42 2006 UTC (13 years, 8 months ago) by hwang
Branch: MAIN
Changes since 1.11: +24 -0 lines
Diff to previous 1.11
Added routine to get pubmed journals articles

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jul 25 19:59:37 2006 UTC (13 years, 8 months ago) by paczian
Branch: MAIN
Changes since 1.10: +1793 -658 lines
Diff to previous 1.10
version ready for the new protein.cgi

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jul 18 19:32:21 2006 UTC (13 years, 8 months ago) by paczian
Branch: MAIN
Changes since 1.9: +2141 -2589 lines
Diff to previous 1.9
*** empty log message ***

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 27 22:40:49 2006 UTC (13 years, 9 months ago) by overbeek
Branch: MAIN
Changes since 1.8: +2 -0 lines
Diff to previous 1.8
updates to Toby's new interface

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 27 20:03:26 2006 UTC (13 years, 9 months ago) by paczian
Branch: MAIN
Changes since 1.7: +2 -1 lines
Diff to previous 1.7
*** empty log message ***

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Wed May 10 03:07:04 2006 UTC (13 years, 10 months ago) by parrello
Branch: MAIN
Changes since 1.6: +20 -19 lines
Diff to previous 1.6
Modified to work in Windows.

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Mar 8 16:05:39 2006 UTC (14 years ago) by paczian
Branch: MAIN
Changes since 1.5: +33 -12 lines
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Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Feb 27 17:59:59 2006 UTC (14 years, 1 month ago) by paczian
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Changes since 1.4: +166 -57 lines
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Thu Feb 23 21:38:42 2006 UTC (14 years, 1 month ago) by paczian
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Changes since 1.3: +38 -72 lines
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Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Feb 23 15:09:10 2006 UTC (14 years, 1 month ago) by paczian
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Changes since 1.2: +43 -19 lines
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Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Feb 22 19:54:17 2006 UTC (14 years, 1 month ago) by paczian
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Changes since 1.1: +131 -144 lines
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Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Feb 18 21:43:01 2006 UTC (14 years, 1 month ago) by paczian
Branch: MAIN
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