[Bio] / FigWebServices Repository:
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Index of /FigWebServices

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File Rev. Age Author Last log entry
 Parent Directory        
SeedComponents/        
WebApplicationComponents/        
tests/        
FormDisplay.cgi  1.1  15 years  parrello  *** empty log message ***
Makefile  1.11  15 years  olson  add support for global .htaccess
README  1.1.1.1  16 years  efrank   import
SetObject.cgi  1.9  15 years  parrello  *** empty log message ***
ShowPage.cgi  1.1  15 years  parrello  no message
SimBlockDisplay.cgi  1.2  15 years  parrello  *** empty log message ***
SimBlockForm.cgi  1.1  15 years  parrello  *** empty log message ***
SimBlockPattern.cgi  1.2  15 years  parrello  Converted code to use set0 and set1 instead of set1 and set2, so that the names ...
SproutGet.cgi  1.4  15 years  parrello  *** empty log message ***
SproutScript.cgi  1.4  15 years  parrello  *** empty log message ***
SproutTest.cgi  1.7  15 years  parrello  *** empty log message ***
add_links.cgi  1.1  16 years  overbeek  support addition of links to pegs
assign_using_tree.cgi  1.2  15 years  overbeek  fixes to using trees under subsystems
assignments.cgi  1.13  15 years  overbeek  fix the assignment set processing
check_subsys.cgi  1.7  15 years  redwards  hide -1 variants in subsys.cgi
chromosomal_clusters.cgi  1.41  15 years  overbeek  interface routines hack
cluster_service.cgi  1.3  15 years  olson  More fixes to cluster code.
cluster_stage.cgi  1.3  15 years  olson  More cluster fixes.
cluster_xmlrpc.cgi  1.1  15 years  olson  XMLRPC interface to cluster job mgr.
conflicted_pegs.cgi  1.1  15 years  overbeek  add conflicted_pegs.cgi
construct.cgi  1.2  15 years  olson  fix propagation of subsystem name in hiddent var.
correspondence.cgi  1.1  15 years  redwards  adding correspondence.cgi
das.cgi  1.12  15 years  olson  minor das fix.
extend_subsys.cgi  1.10  15 years  overbeek  fix extend_subsys to not allow false forward
feature.cgi  1.4  15 years  disz  Feature page works with pi
fid_checked.cgi  1.21  15 years  overbeek  interface routines hack
fusions.cgi  1.1.1.1  16 years  efrank   import
genome_statistics.cgi  1.15  15 years  redwards  better stats
genomebrowser.cgi  1.5  15 years  redwards  more changes to genomebrowser.cgi to make it work really well
get_map_image.cgi  1.3  16 years  disz  local map fixes, removed extra subsystem logon lines
header  1.1.1.1  16 years  efrank   import
homologs_in_clusters.cgi  1.3  15 years  overbeek  start removing trash in filtering automated assignments
index.cgi  1.70  15 years  olson  Bundle of misc bob changes, including sim computation code and search-for-substr...
kernel.cgi  1.13  15 years  olson  Kernel access support for constructs.
kernel_xmlrpc.cgi  1.7  15 years  mkubal  update
organisms.cgi  1.19  15 years  redwards  remove ss classification from organisms.cgi
p2p_service.cgi  1.1  15 years  olson  New p2p service CGI.
pir.cgi  1.31  15 years  redwards  minor changes to pir.cgi
pom.cgi  1.14  16 years  overbeek  fix bug in locating candidates for role
protein.cgi  1.117  15 years  overbeek  interface routines hack
rae.cgi  1.3  15 years  redwards  changes to rae.cgi
record.cgi  1.3  15 years  overbeek  fixes to record.cgi
reset_curator.cgi  1.1  15 years  overbeek  add reset_curator.cgi
scopmap_service.cgi  1.3  15 years  mkubal  *** empty log message ***
seed_ctl.cgi  1.6  15 years  redwards  changes to seed_ctl and raelib
seed_running_perl.fragment  1.1  16 years  olson  Fragment of perl code to be inserted between tool_hdr and actual script of CGI; ...
set_variants.cgi  1.2  15 years  overbeek  add # genomes with pattern in set_variants.cgi
show_kegg_map.cgi  1.2  16 years  olson  Fix double-header
show_local_map.cgi  1.2  16 years  disz  local map fixes, removed extra subsystem logon lines
show_map.cgi  1.2  16 years  olson  fix another double-header
sigs.cgi  1.8  15 years  overbeek  minor addition to sigs.cgi
ss_export.cgi  1.7  16 years  olson  Make names more unique.
ss_scoreboard.cgi  1.8  16 years  olson  Make labels vertical. Fix some bugs.
ssa.cgi  1.31  15 years  gdpusch  Fixed invocation of `align_with_clustal`
ssa2.cgi  1.49  15 years  golsen  More adding order options to Pick Organisms to Extend list
subsys.cgi  1.78  15 years  overbeek  fix formatting of seqs in subsys.cgi
subsys_summary.cgi  1.24  15 years  redwards  minor changes to saving
users.cgi  1.1  15 years  olson  Add simple interface for user management. Right now it just handles the 'assignm...
vert_text.cgi  1.1  16 years  olson  Vertical text image generator.
ACH_resolution.cgi (dead) No revisions exist on Root-bobdev_news
AT_server.cgi (dead) No revisions exist on Root-bobdev_news
AttribXMLRPC.cgi (dead) No revisions exist on Root-bobdev_news
Attributes.cgi (dead) No revisions exist on Root-bobdev_news
COPYING.TXT (dead) No revisions exist on Root-bobdev_news
DocDirectory.cgi (dead) No revisions exist on Root-bobdev_news
DrugDump.cgi (dead) No revisions exist on Root-bobdev_news
Emergency.cgi (dead) No revisions exist on Root-bobdev_news
ErdbDbdPrint.cgi (dead) No revisions exist on Root-bobdev_news
ErdbDocWidget.cgi (dead) No revisions exist on Root-bobdev_news
FBAMODEL_server.cgi (dead) No revisions exist on Root-bobdev_news
FIG_Config.cgi (dead) No revisions exist on Root-bobdev_news
FigSQL.cgi (dead) No revisions exist on Root-bobdev_news
GetGBrowse.cgi (dead) No revisions exist on Root-bobdev_news
HOPSS.cgi (dead) No revisions exist on Root-bobdev_news
MODEL_server.cgi (dead) No revisions exist on Root-bobdev_news
MSSeedSupport_server.cgi (dead) No revisions exist on Root-bobdev_news
MetagenomesByOrganism.cgi (dead) No revisions exist on Root-bobdev_news
ModelImport_server.cgi (dead) No revisions exist on Root-bobdev_news
ProcessTemplate.cgi (dead) No revisions exist on Root-bobdev_news
RTMg.cgi (dead) No revisions exist on Root-bobdev_news
RandomTest.cgi (dead) No revisions exist on Root-bobdev_news
SearchSkeleton.cgi (dead) No revisions exist on Root-bobdev_news
SeedComponents.pm (dead) No revisions exist on Root-bobdev_news
SetPassword.cgi (dead) No revisions exist on Root-bobdev_news
ShowParms.cgi (dead) No revisions exist on Root-bobdev_news
ShowPod.cgi (dead) No revisions exist on Root-bobdev_news
ShowTableFile.cgi (dead) No revisions exist on Root-bobdev_news
SimPieces.cgi (dead) No revisions exist on Root-bobdev_news
SpanishInquisition.cgi (dead) No revisions exist on Root-bobdev_news
TestForms.cgi (dead) No revisions exist on Root-bobdev_news
WS_MGRAST.pm (dead) No revisions exist on Root-bobdev_news
WarnTest.cgi (dead) No revisions exist on Root-bobdev_news
WebApplicationComponents.pm (dead) No revisions exist on Root-bobdev_news
ach_server.cgi (dead) No revisions exist on Root-bobdev_news
aliases_to_pubmed.cgi (dead) No revisions exist on Root-bobdev_news
align_DNA.cgi (dead) No revisions exist on Root-bobdev_news
align_and_tree.cgi (dead) No revisions exist on Root-bobdev_news
alitre_server.cgi (dead) No revisions exist on Root-bobdev_news
anno_server.cgi (dead) No revisions exist on Root-bobdev_news
ar_coexp.cgi (dead) No revisions exist on Root-bobdev_news
array2sub.cgi (dead) No revisions exist on Root-bobdev_news
atomic_regulon.cgi (dead) No revisions exist on Root-bobdev_news
att2sub.cgi (dead) No revisions exist on Root-bobdev_news
auto_subsystems.cgi (dead) No revisions exist on Root-bobdev_news
bad_roles.cgi (dead) No revisions exist on Root-bobdev_news
bbhs.cgi (dead) No revisions exist on Root-bobdev_news
blank_svp.cgi (dead) No revisions exist on Root-bobdev_news
check_ann_errs.cgi (dead) No revisions exist on Root-bobdev_news
check_anno.cgi (dead) No revisions exist on Root-bobdev_news
check_bad.cgi (dead) No revisions exist on Root-bobdev_news
check_fc.cgi (dead) No revisions exist on Root-bobdev_news
check_int_anno.cgi (dead) No revisions exist on Root-bobdev_news
check_peg_functions.cgi (dead) No revisions exist on Root-bobdev_news
check_role_in_ss.cgi (dead) No revisions exist on Root-bobdev_news
check_sets.cgi (dead) No revisions exist on Root-bobdev_news
check_variants.cgi (dead) No revisions exist on Root-bobdev_news
chromosomal_clusters_old.cgi (dead) No revisions exist on Root-bobdev_news
cleanup.cgi (dead) No revisions exist on Root-bobdev_news
close_genome_discrepancies.cgi (dead) No revisions exist on Root-bobdev_news
clust_ss.cgi (dead) No revisions exist on Root-bobdev_news
co_occurs_server.cgi (dead) No revisions exist on Root-bobdev_news
comp_MR.cgi (dead) No revisions exist on Root-bobdev_news
comp_genomes.cgi (dead) No revisions exist on Root-bobdev_news
consistent_sets.cgi (dead) No revisions exist on Root-bobdev_news
cv.cgi (dead) No revisions exist on Root-bobdev_news
cv_workbench.cgi (dead) No revisions exist on Root-bobdev_news
diagram.cgi (dead) No revisions exist on Root-bobdev_news
diagram_upload.cgi (dead) No revisions exist on Root-bobdev_news
diffsF.cgi (dead) No revisions exist on Root-bobdev_news
display_role_literature.cgi (dead) No revisions exist on Root-bobdev_news
display_subsys.cgi (dead) No revisions exist on Root-bobdev_news
display_subsystem_literature.cgi (dead) No revisions exist on Root-bobdev_news
edit_feature.cgi (dead) No revisions exist on Root-bobdev_news
eggs.cgi (dead) No revisions exist on Root-bobdev_news
ex_assertions.cgi (dead) No revisions exist on Root-bobdev_news
exclude_from_solid_rectangles.cgi (dead) No revisions exist on Root-bobdev_news
fabric.cgi (dead) No revisions exist on Root-bobdev_news
families_on_tree.cgi (dead) No revisions exist on Root-bobdev_news
ff.cgi (dead) No revisions exist on Root-bobdev_news
fig_scripts_service.cgi (dead) No revisions exist on Root-bobdev_news
figfam_proto.cgi (dead) No revisions exist on Root-bobdev_news
figfam_server.cgi (dead) No revisions exist on Root-bobdev_news
figfam_server_1.cgi (dead) No revisions exist on Root-bobdev_news
figfam_server_2.cgi (dead) No revisions exist on Root-bobdev_news
find_poss_subsys_instances.cgi (dead) No revisions exist on Root-bobdev_news
find_reaction_paths.cgi (dead) No revisions exist on Root-bobdev_news
find_ss_genes.cgi (dead) No revisions exist on Root-bobdev_news
frame.cgi (dead) No revisions exist on Root-bobdev_news
genome_feature_dna.cgi (dead) No revisions exist on Root-bobdev_news
genome_object.cgi (dead) No revisions exist on Root-bobdev_news
get_dlit.cgi (dead) No revisions exist on Root-bobdev_news
get_dlits.cgi (dead) No revisions exist on Root-bobdev_news
get_expert_2c.cgi (dead) No revisions exist on Root-bobdev_news
graph_exp.cgi (dead) No revisions exist on Root-bobdev_news
heat_map.cgi (dead) No revisions exist on Root-bobdev_news
hope_tools.cgi (dead) No revisions exist on Root-bobdev_news
install_subsystem_dir.cgi (dead) No revisions exist on Root-bobdev_news
legionella_v1.cgi (dead) No revisions exist on Root-bobdev_news
legionella_v4.cgi (dead) No revisions exist on Root-bobdev_news
ligands.cgi (dead) No revisions exist on Root-bobdev_news
link.cgi (dead) No revisions exist on Root-bobdev_news
linkin.cgi (dead) No revisions exist on Root-bobdev_news
list_subsys.cgi (dead) No revisions exist on Root-bobdev_news
local_sim_compute.cgi (dead) No revisions exist on Root-bobdev_news
locate_patterns.cgi (dead) No revisions exist on Root-bobdev_news
lock_subsys.cgi (dead) No revisions exist on Root-bobdev_news
ma.cgi (dead) No revisions exist on Root-bobdev_news
ma2sub.cgi (dead) No revisions exist on Root-bobdev_news
ma_to_tf.cgi (dead) No revisions exist on Root-bobdev_news
ma_to_tf_nr.cgi (dead) No revisions exist on Root-bobdev_news
ma_to_tf_pairs.cgi (dead) No revisions exist on Root-bobdev_news
ma_to_tf_single.cgi (dead) No revisions exist on Root-bobdev_news
makewsdl.pl (dead) No revisions exist on Root-bobdev_news
myseed.cgi (dead) No revisions exist on Root-bobdev_news
ncbi.cgi (dead) No revisions exist on Root-bobdev_news
neighbor_tree.cgi (dead) No revisions exist on Root-bobdev_news
nindex.cgi (dead) No revisions exist on Root-bobdev_news
nmpdr_aliases_to_pubmed.cgi (dead) No revisions exist on Root-bobdev_news
nmpdr_lucene_search.cgi (dead) No revisions exist on Root-bobdev_news
paint_network.cgi (dead) No revisions exist on Root-bobdev_news
pathway.cgi (dead) No revisions exist on Root-bobdev_news
pchs.cgi (dead) No revisions exist on Root-bobdev_news
peg.cgi (dead) No revisions exist on Root-bobdev_news
propose_new_peg.cgi (dead) No revisions exist on Root-bobdev_news
protein_by_ss.cgi (dead) No revisions exist on Root-bobdev_news
protein_info.cgi (dead) No revisions exist on Root-bobdev_news
protein_new.cgi (dead) No revisions exist on Root-bobdev_news
protein_sets.cgi (dead) No revisions exist on Root-bobdev_news
protein_sets_2.cgi (dead) No revisions exist on Root-bobdev_news
protein_sets_by_alias.cgi (dead) No revisions exist on Root-bobdev_news
proteinfamilies.cgi (dead) No revisions exist on Root-bobdev_news
rast_save_sim_output.cgi (dead) No revisions exist on Root-bobdev_news
rast_submit_server.cgi (dead) No revisions exist on Root-bobdev_news
region.cgi (dead) No revisions exist on Root-bobdev_news
resolve_paralogs.cgi (dead) No revisions exist on Root-bobdev_news
rest_mgrast.cgi (dead) No revisions exist on Root-bobdev_news
rest_rtmg.cgi (dead) No revisions exist on Root-bobdev_news
rest_seed.cgi (dead) No revisions exist on Root-bobdev_news
ribosomal_rnas.cgi (dead) No revisions exist on Root-bobdev_news
rssv.cgi (dead) No revisions exist on Root-bobdev_news
samples.cgi (dead) No revisions exist on Root-bobdev_news
sap_server.cgi (dead) No revisions exist on Root-bobdev_news
sap_server.psgi (dead) No revisions exist on Root-bobdev_news
save_roles_to_attributes.cgi (dead) No revisions exist on Root-bobdev_news
save_to_attributes.cgi (dead) No revisions exist on Root-bobdev_news
sdk_uniprot_search.cgi (dead) No revisions exist on Root-bobdev_news
search_log.cgi (dead) No revisions exist on Root-bobdev_news
seed.psgi (dead) No revisions exist on Root-bobdev_news
seed_news.cgi (dead) No revisions exist on Root-bobdev_news
seed_svc.cgi (dead) No revisions exist on Root-bobdev_news
select.cgi (dead) No revisions exist on Root-bobdev_news
serv_FIGfam.cgi (dead) No revisions exist on Root-bobdev_news
serv_complex.cgi (dead) No revisions exist on Root-bobdev_news
serv_feature.cgi (dead) No revisions exist on Root-bobdev_news
serv_genome.cgi (dead) No revisions exist on Root-bobdev_news
serv_index.cgi (dead) No revisions exist on Root-bobdev_news
serv_otu.cgi (dead) No revisions exist on Root-bobdev_news
serv_reaction.cgi (dead) No revisions exist on Root-bobdev_news
serv_role.cgi (dead) No revisions exist on Root-bobdev_news
serv_subsysRow.cgi (dead) No revisions exist on Root-bobdev_news
server_check.cgi (dead) No revisions exist on Root-bobdev_news
sgv.cgi (dead) No revisions exist on Root-bobdev_news
show_cffs.cgi (dead) No revisions exist on Root-bobdev_news
show_exp_assertions.cgi (dead) No revisions exist on Root-bobdev_news
show_log.cgi (dead) No revisions exist on Root-bobdev_news
show_pegs.cgi (dead) No revisions exist on Root-bobdev_news
split_functional_role.cgi (dead) No revisions exist on Root-bobdev_news
split_role_in_ss.cgi (dead) No revisions exist on Root-bobdev_news
ss_correlations.cgi (dead) No revisions exist on Root-bobdev_news
ss_directed_compare_regions.cgi (dead) No revisions exist on Root-bobdev_news
ssp.cgi (dead) No revisions exist on Root-bobdev_news
ssp2ss.cgi (dead) No revisions exist on Root-bobdev_news
staph_exp.cgi (dead) No revisions exist on Root-bobdev_news
start.cgi (dead) No revisions exist on Root-bobdev_news
status_of_model.cgi (dead) No revisions exist on Root-bobdev_news
stimulus.cgi (dead) No revisions exist on Root-bobdev_news
study.cgi (dead) No revisions exist on Root-bobdev_news
subsys_diagram.cgi (dead) No revisions exist on Root-bobdev_news
subsys_hope.cgi (dead) No revisions exist on Root-bobdev_news
subsys_vectors.cgi (dead) No revisions exist on Root-bobdev_news
subsystem_server.cgi (dead) No revisions exist on Root-bobdev_news
subsystem_server_sapling.cgi (dead) No revisions exist on Root-bobdev_news
sup_server.cgi (dead) No revisions exist on Root-bobdev_news
targets.cgi (dead) No revisions exist on Root-bobdev_news
testGetControlledVocabularyAnnotationsForPegServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetFigIdsForUniprotKbPrimaryAccessionServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetFunctionalRolesByUniprotkbPrimaryAccessionServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetGeneForPegServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetOrganismCollectionServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetOrganismsInSubsystemServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetPegsForControlledVocabularyAnnotationServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetPegsForEnsemblgeneIDServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetPegsForOrganismServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetPegsInNeighborhoodServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetPegsInSubsystemCellServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetSubsystemCollectionServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetSubsystemsHavingOrganismServer.cgi (dead) No revisions exist on Root-bobdev_news
testGetUniprotKbPrimaryAccessionsForFigIdServer.cgi (dead) No revisions exist on Root-bobdev_news
test_basic_functionality.cgi (dead) No revisions exist on Root-bobdev_news
to_prodom.cgi (dead) No revisions exist on Root-bobdev_news
tree_jnlp.cgi (dead) No revisions exist on Root-bobdev_news
tyra_cluster.cgi (dead) No revisions exist on Root-bobdev_news
tyra_sequence.cgi (dead) No revisions exist on Root-bobdev_news
wc.cgi (dead) No revisions exist on Root-bobdev_news
webservices_ACH.cgi (dead) No revisions exist on Root-bobdev_news
webservices_mgrast.cgi (dead) No revisions exist on Root-bobdev_news
webservices_nmpdr.cgi (dead) No revisions exist on Root-bobdev_news
webservices_rast.cgi (dead) No revisions exist on Root-bobdev_news
webservices_seed.cgi (dead) No revisions exist on Root-bobdev_news
webservices_seed_complex.cgi (dead) No revisions exist on Root-bobdev_news
wiki.cgi (dead) No revisions exist on Root-bobdev_news
wsdl.cgi (dead) No revisions exist on Root-bobdev_news
wsdl_ach.cgi (dead) No revisions exist on Root-bobdev_news
wsdl_mgrast.cgi (dead) No revisions exist on Root-bobdev_news
wsdl_nmpdr.cgi (dead) No revisions exist on Root-bobdev_news
wsdl_rast.cgi (dead) No revisions exist on Root-bobdev_news
wsdl_seed.cgi (dead) No revisions exist on Root-bobdev_news
wsdl_seed_complex.cgi (dead) No revisions exist on Root-bobdev_news

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