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Revision 1.1 - (download) (annotate)
Thu May 14 14:53:09 2009 UTC (10 years, 5 months ago) by dsouza
Branch: MAIN
CVS Tags: rast_rel_2009_05_18, rast_rel_2014_0912, rast_rel_2010_0928, rast_rel_2009_0925, rast_rel_2010_0827, rast_rel_2014_0729, rast_rel_2009_07_09, myrast_33, rast_rel_2011_0928, rast_rel_2010_0526, rast_rel_2010_1206, rast_rel_2010_0118, rast_rel_2011_0119, HEAD
Supplementary material for Evolutionary Cohesion Group Analysis of Aspartokinase paper with Roy Jensen

>Pmar_Ca_|_CG-32
MALLIKKFGGTSVEDITKIKAIAQSIIQSKEAGNDIVVVVSAMGHSTDHLNKLAESISKN
PNSRELDMLLSTGEQVTMALLSMSLNEYGIPAISLTGSQVGIVTESIHGKARILDIKTER
IQNYINQGYVVVVAGFQGSTLSHT~GSMEITTLGRGGSDTSAVALSTALGAETCEIYTDV
PGVLTTDPRIVPNAKLLDIISCEEMLELASVGASVLHPRAVEIARNYGIKLYVKSSQALS
NGTLLHSKIKPLALKRGGLELTKTVNSLEVLEKQTVFSISKLPDRPGIAAQIFETLSKAN
INVDLIIQATHDGK~~~~SNDIAFTVNDFELTKTIDQCKLITKQLGG~~~~~~~~~EYDF
KKN~MTKLSIQGAGIMGRPSVSADLFDTLFQANINVRLIATSEIKVSCVIDIENISKAIR
FVSEKFKLSDKQI~~~FINPVIESEDQ~~PEVRGIALDKNQVQVSIRNLPDKPGVAASIC
LALAENNLIFDTIVQSERLTSLK~~~TKDISFTMSKQDRERANTIFHSLTKKLAG~SFIE
DGPAIAKVSTVGAGMAFKVGTAGKIFRALANKNINIEMIATSEIRTSCIVLEQDCDQAVN
AIHSYFQLDK~~~~~~~~~~~~~
>Pmar_Ba_|_CG-32
MALLVQKFGGTSLGSIERIKAVAQRIKSSKEKGDDLVVVVSAMGHQTDELTRLASEITVD
PPHREMDMLLSTGEQVSISLLTMALNELGTPAISLTGTQAGIITESAHGRARILEIRTER
IKNLLDQGQTIVIAGFQGTTLGIG~GIAEITTLGRGGSDTSAVALAASLEAAKCEIYTDV
PGVLTTDPRIVKNAKLMKSISCDEMLELASLGAAVLHPRAVEIARNFGVTLVVKSSWDNL
DGTTLTSNKKP~DFSQGGIEHRSPVDGLELLENQAVVALSNIPDRPGIAAELFESLSEGG
VNVDLIIQATHQID~~~~SNDITFTVAENELHNALTQCKKLVNTIGG~~~~~~~~~DISF
QKD~LTKLSIYGAGIMGRPGIASSLFQILSDSGINIRLIATSEVKVSCVIDAELGKKALR
NVSEVFKLTDKQI~~~TVNPTIENNNE~~PEVRGIALDKDQIQISVKNVPDKPGTASTIC
STLAEKNISLDTIVQSERKHKDK~~~TKDISFTLKKNDRSDAKYALKELIGNWKG~SNLE
EGESIVRISAVGSGMPFTKGTAGKIFRALANQKINIEMIATSEIRTTCIISEKYGEKALN
EIHSCFKLGKNES~~~~~~~~~~
>Pmar_Aa_|_CG-32
MALLVQKFGGSSVGNVERIQAVAERIATSKDLGHDLVIVVSAMGQTTDELTALAKVISSN
PPQREMDMLLATGEQVSISLLSMALHELGIPAISMTGAQVGIVTESAYGRARILDVRTER
LQSLLSTGKVVVVAGFQGTSLSSV~GTAEITTLGRGGSDTSAVAIAAALGADACEIYTDV
PGVLTSDPRQVSDAQLMQEVSCDEMLELASLGASVLHPRAVEIARNFGVALVVRSSWSNE
AGTKLTSKSKR~PIGREGLELGRPVDGVELAEGQAVIALSHVPDQPGVAATLFENLSSDG
VNVDLIIQSTHEGN~~~~SNDIAFTVAEADLAKAHSLCEGLLKSVGG~~~~~~~~~QLSA
EAG~MSKLSISGAGIMGRPGIAASLFDTISRAGINLRLIATSEVKVSCVIDATLGSKALR
AVSTAFELSDSQV~~~RINPLGNGKGE~~PEVRGVALDQGQAQLSVRGVPNRPGTAAALC
SAMAEAGISLDAIVQSERQHDDG~~~SRDISFTLKRDEREQANKTLAPLLAQWPG~ANLE
DGPAIARVSAVGAGMPATAGTAGRMFRALADAKINIAMIATSEIRTSCVVAEPDGVKALQ
SVHKGFGLGEEADHPVQSNS~~~
>SYNE-11a_|_CG-32
MALLVQKYGGTSVGSVERIQAVAKRVAAARLDGHDLVVVVSAMGHTTDELTALARALNPD
PPQREMDMLLATGEQVSIALLSMALQAEGVAATSMTGPQVGIVTESAHGRARILEVRTER
VKRRLHDGHVVVVAGFQGTSTGSA~GTPEITTLGRGGSDTSAVALAAALGADACEIYTDV
PGVLTTDPRKVPEAQLMTQVSCDEMLELASLGAAVLHPRAVEIARNYGVPLIVRSSWSDE
PGTRLFSQPSR~RIGSEGLELGKPVDRAELLEGQAVVALAHVPDEPGVAARLFEGLGAAG
LNVDLIVQATHDGS~~~~SNDIAFTLAEAELPAAEAFCREHLGE~GS~~~~~~~~~QLQV
QSG~LAKLSIGGAGIMGRPGVAAQLFDGLSKMGISLRMIATSEVKVSCLIQGEQAAKALR
TAAQVFELDDHQL~~~QHNPLPGGEGE~~PDVRGVALDRDQAQLTVTAVPDRPGSAAALC
RALADGGISLDTIVQSERQRQTDLGLCRDIAFTLPRDDLSRASEALRPLLKLWPG~AELV
EGKAIARVSAVGAGMPSTPGSAAKMFRALADAGINIEMIATSEIRISCVVPEDDGIGALQ
AVHQAFGLNGESQHQAQGSEWAG
>Gvio_Aa_|_CG-32
MGLIVQKYGGTSVGSAERMRSVAERIARTHRQGHDLVVVVSAMGHTTDALVKMACEMHGE
PDPREMDMLLTTGEQQSVALLTMALHALGCKAISLTGAQVGVVTEPNHTRARIRRVQTGR
INELLAAGYVLVVAGFQGICHSRF~~~WEITTLGRGGSDTSAVALAAVLKANRCEIYTDV
PGVLTTDPRLVGDAALLEEITSEEMLELASLGAQVLHPRAVEIARNYAVPLVVRSSWSDA
PGTIVLSPRLPVDRAIDNLETERPVDAVYIDNHQAKIALLRVPDRPGVAAALFGHLAKAG
IDVDLIIQSIHHPNAPEPTNDIAFTVQRSDLAAAVATSETAAAALGG~~~~~~~~CAVVV
DPV~PTKVSIRGAGIIGRPGVVAQMFKALAEARINIQMISTSETSLSCVIAGEQAEKAGE
VLCGQFGLRAPVY~~~EEPPVVSGARPVAQAVRGVALDTNQAQVAILQIPDRPGVAAEIF
QCLAQEGIAVDMIVQSQR~~~~~GADTNDIGFTVSRSAVRAAQRALASLCMGFAGCGGVV
VRESVAKLSLVGAGIVGTPGVAARMFETLASLGTNIEMISTSTIKVSCIVEAACCEASLQ
AVHRAFGLGSGAMVAVEGRSS~~
>Selo_Aa_|_CG-32
MALIVQKYGGTSVGSVERITAVAQRIAQTVAAGNQVVVVVSAMGHSTDELLKLANGISAN
PSRRELDMLLATGEQVSIALLSMALHEQGCDAISMTGAQVGIITEAHHSRARILEIDPQR
LQSQLDAGRVVVVAGFQGIASSDRTALTEITTLGRGGSDTSAVALAAALNADRCEIYTDV
PGILTTDPRLVPEAHLLEEITCDEMLELASLGASVLHPRAVKIARNYGVRLVVRSSWTQE
PGTGVVAPPRRSDRSLQGLEIGRPVDGLALDTDQAKVALLHVPDRPGIAASLFGEMAQRG
VNVDLIIQSIHEGN~~~~SNDISFTVSQADLEKAEAGTTQLLADLGG~~~~~~~~~EQQS
EAA~VAKVSISGVGIVGRPGIAAQMFSALAQGGINIQMISTSEVKVSCVIAAADQQRAIA
ALQESFELEEAIA~~~ATATDACTTDL~~PAVRGVALDRDQARLAILNVPDLPGMAATIF
QILADRQISVDMIIQSQRGRIHNGQPCRDIACTLPPADAELAAAALQAFADQH~G~CSLE
IQTEIAKVSIVGSGMVQQPGVAAQMFAALANHGINIHMIATSEIKVSCIVDASQAVEALQ
TVHAAFGLASDRRIEVPA~~~~~
>Telo_Aa_|_CG-32
MGLIVQKYGGTSVGSVERIQAVARRVKATVAAGHQVVVVVSAMGKTTDSLVQLAYAISDR
PSQREMDMLLSTGEQVSIALLTMALHALGEPAISLTGAQVGIVTEPAHTRARILHIETQR
LERHLKAGQVVVVAGFQGITAATD~~~FEVTTLGRGGSDTSAVALAAALRADCCEIYTDV
PGILTADPRLVPNAQLMSEITCDEMLELASLGAKVLHPRAVEIARNYGVDLVVRSSWTDD
PGTRVIAPARP~PRPVENLELGKPVDGVALDTDQAKVALLRVADRPGVAAQLFGELARQN
LDVDLIIQSIHEGQ~~~~TNDIAFTVQKSVLKQAEAIAVAFYPRLS~~~~PRVEETDVLV
DAD~IAKVSITGAGMIGRPGVAAQMFSALAAAGINLQMISTSEVNVSCTVAAADAGRAIA
VLSQTFDVEAATTV~~PQNPPAA~~~~~~PPVRGVALDPKQARIAIRDVPDRPGMAAAIF
QTLADAAISVDMIIQSQRSRSLGGVMTRDIAFTVASTDAEDATELLRKVQAQLGY~GDVL
VDTAIAKVSIVGVGMIHRPGIAAQMFAALARENINIQMIATSEIRVSCVVAESEGVRALR
AVHRAFGLDGEAPVAIPDVGK~~
>Tery_Aa_|_CG-32
M~LIVQKYGGTSVGSVERIKAVAQRIAKT~ASDRSVVVVVSAMGKTTDTLVKLANDISPN
PCRREMDMLLSTGEQVTIALVSMALQELGVPAISLTGAQVGIVTEAQHSRARILHIQTER
IEEHLQLGEVVVVAGFQGISQTRH~~~QEITTLGRGGSDTSAVALAAALQAQRCEIYTDV
PGILTTDPRIVPEAQLMSEITCDEMLELASLGAKVLHPRAVEIARNYGMPLVVLSSWSDA
PGTRVVSAIPK~RPALQDLELTKPVDAVEYDTNQAGISMLRLPDRPGVAAQLFSGIALQN
IDVDLIIQSIHESN~~~~TNDIAFTVSKDVLKQAAAVADAMLPALGKNAHPSLGEPEVKT
EERPIAKVSLVGAGMIGRPEVAAKMFEALAAAGVNIIMISTSEVKVSCVVDAEDCKKTVN
SLCQAFDVDVADI~~~SSSSTAGESEEVPPPVRGVALDIKQARLAVRQVPDHPGMAAKIF
GLLAQQNISVDMIIQSQRCHSVDGVLTRDIAFTVSQPEGETAYQILANTAADFGW~GEVV
LESSIAKVSVVGSGMISHPGVAAQMFEALAASQINILMITTSEIKISCVVEEEDGVKALQ
AIHKAFCLSANEVVKVPA~~~~~
>SYNE-4a_|_CG-32
MALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQISPN
PCRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTEAEHSRARILEIRPDR
LEHHLREGKVVVVAGFQGISSVEH~~~LEITTLGRGGSDTSAVALAAALKADFCEIYTDV
PGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSDE
PGTKVVAPPVQ~NRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQ
VDIDLIIQSIHDGN~~~~SNDIAFTVVKDLLNTAEAVTSAIAPALRS~YPEADQEAEIIV
EKG~IAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRDADRAIA
ALSNAFGVT~~~~~~~LSPPKNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLF
TALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEGDSSQAEAILQPLIKDWLD~AAIV
VNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIATSEIKISCVVPQDRGVDALK
AAHSAFNLAGTKTVTVPA~~~~~
>Avar_Aa_|_CG-32
MALIVQKFGGSSVGSVERIQAVAQRVYKTVKAGNSLVVVVSAMGKTTDGLVKLANEISRN
PNRREMDMLLSTGEQVTIALLSMALQELGQPAISMTGAQVGIVTEAEHTRARILHIETER
VEGHIQEGKVVVVAGFQGISSN~~~GSLEITTLGRGGSDTSAVALAAALQADFCEIYTDV
PGILTTDPRIVPEAQLMGEITCNEMLELASLGAKVLHPRAVEIARNYGMPLVVKSSWTDD
PGTWVTTPKPQ~GRSLINLELARPVDDVELDTDQAKVALLRVPDKPGVAAKLFGEISRQK
VDVDLIIQSIHEGN~~~~SNDIAFTVTTPILKRAEAVAAAIAPSLRSPSHPKSDEAEVMV
EQN~IAKVSIAGAGMIGRPGVAAKMFTTLAEAGVNIQMISTSEVKVSCVIDAQDGDRAII
ALRKAFEIETPLHS~~PTPPTLSTHNS~~PPVRGVALDLNQARLAIRQVPDRPGMAAQLF
GILAQNNISVDMIIQSQRCRIVDGVPRRDIAFTVPRMDGETAQKLLCQVAPELGW~GDVV
LDSAIAKVSIVGAGMVGQPGVAAKMFEALAKHQINIQMIATSEIKISCVVSQEQGVQALQ
VIHTAFELAGTEKFVVPV~~~~~
>NOST-3a_|_CG-32
MALIVQKFGGSSVGSVERIQAVAQRVYKTVKAGNSLVVVVSAMGKTTDGLVKLANEISRN
PNRREMDMLLSTGEQVTIALLSMALQELGQPAISMTGAQVGIVTEAEHTRARILHIETER
VEGHIKEGKVVVVAGFQGISSN~~~GSLEITTLGRGGSDTSAVALAAALQADFCEIYTDV
PGILTTDPRIVPEAQLMGEITCNEMLELASLGAKVLHPRAVEIARNYGMPLVVKSSWTDD
PGTWVTTPKPQ~GRSLINLELARPVDDVELDTDQAKVALLRVPDKPGVAAKLFGEISRQK
VDVDLIIQSIHEGN~~~~SNDIAFTVTTPILKRAEAVAAAIAPSLRSPSHPKSDEAEVMV
EQN~IAKVSIAGAGMIGRPGVAAQMFATLAEAGVNIQMISTSEVKVSCVIDAQDGDRAII
ALRKAFEIETPLHSQLPTPSSLSTHNS~~PPVRGVALDLNQARLAIRQVPDRPGMAAQLF
GILSQHNISVDMIIQSQRCRIVDGVPRRDIAFTVPRMDGETAQKLLCQVAPELGW~GDVV
LDSAIAKVSIVGAGMVGQPGVAAKMFEALAKHQINIQMIATSEIKISCVVSQEQGVQALQ
VIHTAFELAGTEKFVVPA~~~~~

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