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Revision 1.1 - (download) (annotate)
Thu May 14 14:53:09 2009 UTC (10 years, 5 months ago) by dsouza
Branch: MAIN
CVS Tags: rast_rel_2009_05_18, rast_rel_2014_0912, rast_rel_2010_0928, rast_rel_2009_0925, rast_rel_2010_0827, rast_rel_2014_0729, rast_rel_2009_07_09, myrast_33, rast_rel_2011_0928, rast_rel_2010_0526, rast_rel_2010_1206, rast_rel_2010_0118, rast_rel_2011_0119, HEAD
Supplementary material for Evolutionary Cohesion Group Analysis of Aspartokinase paper with Roy Jensen

>Dpsy_Aa_|_CG-02
----------------------MMVRIMKPLRIEKIGGTTMSRFGEVLDNVIFYD--SED
IFNRIYVVSAYSGVTNALLEHKKTHQ----PGIYQTFVQNEA---CDMAMERLKTTLCEI
NRGFADIGLDLEVANNFICKRIQDAVEVLHSMANVLSSGYVNRSEMLLAARELLASIGEM
HSAFNSANILQNRGYKASYVDLSGWQDSRDMTIDQRILETFTKFDPSDTICIATGYAKGR
EGIMREFDRGYSEVTFSKIAVLLKASEAIIHKEYHLCSGDPLIIGEDKVHPICNTNYDVA
DQLADVGMEAIHPKASKQIEIAGISIRIKNSFDPSHSGTLFTKEYICPQSKTEVITGSDK
VTCLEVHDTRMVGEVG-FDMKIMEVLSAHQVSYINKATNANTIGVIVYDN-DCTEELLRD
LRAEF--ELVTDMHTAIVCAIGSNIAKPGILAKATNALATSHINILAVSQTSRQTNMQFI
INREHFKEAQRVLHAALCEEGES------------
>Adeh_Ab_|_CG-02
MWRTFGYHRGPSSPGPESRTATQSPGTFRMISVEKIGGTSMSRFDEVLRNIMLRD--PSR
VYGRVYVVSAYAGVTNQLLEHKKTGE----PGVYARFANGGD---FTTAIEALTGKLKAI
NAGLAPLGLDLARADGFIEKRMKELRALLDSMRHVLASGYVRRDSVLLAAREMLAAVGEA
HSAFNSVELLRAKGVEASLMDLSGFDDDDPLTIDERIHKCFTGVDVTRQVVVVTGYTKGV
EGIMREFDRGYSEVTFSKVAVELRADEAVIHKEYHLSSADPELVGAQNTVVVGMTNYDVA
DQLADVGMEAIHPKAAKPMELAGIAIRLKNTFEPEHPGTLITKDYVGSQARIEVIAGSPK
VSAVEIHDPSMVGTVG-FDLGVMEIFQRHGISYILKATNANSITHVVWEK-SVSSAFVEE
LENQY--QKVTVVPSAIVCVIGSNIAFPGVLARATQALADNGINVNAFSQSLRQTNMQFV
IDRKDYKQAVIALNRALCLNPPTQAVA--------
>Ppro_Ba_|_CG-02
----------------------------MSYTVEKIGGTSMSAFDAILDNIMLRP---KS
PYNRVFVVSAYGGITDALLECKRSGK----PGIYQYIAKRDET--WLKAVADLEMRMLLV
NENMFADPLNRRRADQFIKSRITDAVSCITNIIETCQYGQFSLRHYLPQIREFLSSLGEA
HSAYNTALKLKTLGINATFVDLSGWDNKSYGSLDDVIKRAFTNIDVTKELPIPT------
--LLQNAD--FADSNFMILC----------------------------------------
---------------------------------PKNSSIFNDHGY---------------
------------------------------------------ITYYLSGGMEILNKLLYK
AEKRYSNSTITGCMVTFISIIGASINTNTALSKGILALTDKQISPIAAHSSMRNVNVQFV
VEDKYYKAAICALHSEFINQSENTTRKIA------
>Vcho_Fa_|_CG-02
---------------------------MMSYTVEKIGGTSMTAFDAVLENILLRP---EQ
LYGRVFVVSAYSGMTDALLECKRTGA----PGIYQKIAKHDES--WRDAVYALEQRMLLI
NENMFADAMTRLRADKFIRARLAEAIACIQNILQTCQYGQFSLRQYLPQIREFLASLGES
HSAYNTALKLNTLGVNARFVDLSGWCEAMQGNLDQVIEEAFRDIDVTSELPIVTGYASCQ
EGLMRTYDRGYSEMTFSRIAVVTGAQQAIIHKEYHLSSADPRLVGAEKVRPIGLTNFDVA
DQLANLGMEAIHPNAAAGLRQSNIDLRIKNTFEPDHSGTLITASHQPQQDRVEIIAGRDK
VFALHLFDQSMVGMMDKVSHELIEWIHAAKVQLIGKEMNANSVTYYLSGSSEPLNHIRYQ
AEKRYPQAKVSGRMVALISAIGAHMETNKVLAQGLQALLEHQLQPMAAHSSMRNVNVQFV
VDDADYANGVCVLHQALMPFAQPSSARKVA-----
>Vfis_Ac_|_CG-02
----------------------------MTYTVEKIGGTSMTAFDAVLDNIFLRP---KD
PYNRVFVVSAYGGITDSLLECKKTSK----PGVYQLIAKRDDK--WEEALEYVEKRMLLT
NEHIFIDPMNRIRADKFICSRIKQAKNCIANILETCQYGQFSLRRYLPQVREFLSSIGEA
HSAFNTALKLKTMGINAKFVDLSGWDNQPPRSLDDTIINVFKDIDVTKELPIVTGYAYCQ
EGLMGTYDRGYSEMTFSRIASLTQADLAIIHKEYHLSSADPRVVGTDKVFPIGRTNYDVA
DQLANLGMEAIHPNAAAGLRESNIEIQIKNTFEPKHKGTLISSDYQPETDKVEIIAGKEK
VFALHLFDQTMVGQVDNVSYELMEIISDAHVNLIGKEMNANSITYYLGGNTESLNKVLYK
TEKRYPNASIKGRMVALIAVIGSQIDTNKALAKGVLSLMNSDVTPVALHSSMRNVNVQFV
VSDKDYQNAIKALHHEFCEEVPAKQVKTSQVA---
>Vpar_Ac_|_CG-02
----------------------------MTFTVEKIGGTSMTAFDAVLDNIILRP---KT
PYNRIFVVSAYSGMTDALLECKKTSK----AGVYQLIAKRDDQ--WQDALAYVESRMLLT
NENIFADPMNRIRADKFIRSRIAEAKNCIANILETCQYGQFSLRHYLPQIREFLSSIGEA
HSAYNTALKLKNMGINARFVDLSGWDNQEPRSLDDSIRDAFADIDVTKELPIVTGYAYCK
EGLMHTYDRGYSEMTFSRIAAITKADLAIIHKEYHLSSADPRVVGPEKVLPIGSTNYDVA
DQLANLGMEAIHPNAAAGLRESGIELQIKNTFEPEHEGTLISSGYRPEEDKVEIIAGKEK
VFALHLFDQAMVGKVDNVSYELMEIISDARVSLIGKEMNANSITYYLGGSSDSLNKVLYK
AEKRYPNASIKGRMVALISAIGSHIDTNKTLAKGVLSLMNSGVTPVALHSSLRNVNVQFV
VSDKEYQRAICALHDEFFTPVEGSNAMEHVA----
>SILI-1b_|_CG-02
----------------------------MTHTVEKIGGTSMSRVNELVGTLFTGGRKPDD
LYGRVFVVSAFGGITNLLLEHKKTGE----PGVYARFADAESDHGWHEALSRVGDEMRKA
HEAVLENAGDVAQADAFVSERIEGARNCLIDLQRLCSYGHFRLAEHMLQIRELLSGLGEA
HSAYVTALLLQRAGVNARFVDLSGWRDEGDVTLEERISSALNDVDPATEMPIVTGYAQCA
EGLMREFDRGYSEVTFSCLAALTGASEAIIHKEFHLSSADPKLVGEGVAQKLGHTNYDVA
DQMSNMGMEAIHPKAAKTLRQADVPLRVTNAFEPEDPGTLID-DKPADQPAVEMITGLD-
IIALELFEQDMVGVKG-YDAAILEVLTRHDVRIVSKTSNANTITHYLDTSLTVLKRVEKD
LAKIYPNADISARLLSMASAIGRDLKGLSVLTRGLQAIADVGLASLGASQGPRNVDVQFI
VEREDLKPVISALHKVLVEGRPAKQEKPIKAAA--
>Acry_Ab_|_CG-02
--------------------------MSMAPSVEKIGGTSIAATDAVVGNVLIAGRAGRD
LYRRIFVVSAYGGITDLLLEPKKKTDAAKPPGLYASFAADGEKGDWRDALDAVAAAMRAR
NEEVFGTSPERAVADDFVAARIGETRACLDDLDRLRGHGHFRLDEPLATLRELLAGLGEA
HSAHNTALLLRARGVNAAFVDLTGWQDGRNLDLDERIRTGLDGIDSATTLPIVTGYVKCS
DGMVRKYDRGYTEMTFARLAVLTGAREAIIHKEFHLSSADPKVVGVGKARKIGRTNYDVA
DQLANLGVEVIHPGAARGLRQAGIPLRVRNTFDRHDEGTLICADYVSAAPRIEIVTGIRE
LRALQFFEQDMVGKKG-YDAAILDTLTKHRARIVSKSSNANAITHYLAAGGPTVRRVIAD
LEARFPNAEVSAPRLAMVALIGSDLSAEGCVGRALDALGAAGIGVKAMQHQMRNVDIQFI
LDTDRFDDAIRALHAALVECRATQDGKGGTLRTAA
>Sala_Ab_|_CG-02
--------------------------MSGQHSVEKIGGTSMAATATLFDNVLIAGRSGAD
LYNRIFVVSAYAGMTDLLLENKKTGA----PGVYGHFVDDDDADAWRRAMAAVRAAMHAR
NADMFARGDSRAEADRFVDARIDAVTACLDDLARLRSHGRFGLKDQLATVRELLAGIGEA
HSAHSTALLLRDRDVNALFVDLTLWDQDDLRSLDERIGEAFAAIDLRDTLPIVTGYAGCE
GGMVRRYARGYTEMTFSRLAVLTGAREAIIHKEFHLSSADPKLVGEDKARKIGRTNYDVA
DQLANLGMEAIHPGAGRGLRQSGIPLRVRNTFDREDEGTLVTGDYVSDVPRVEIVTGLRQ
VQALQFFEQDMVGVKG-YDAAILDALARHKLWIVSKSSNANTITHYLSASAAAVNKAIAD
LQGHYPDAAISAQPVAMVSVIGSDISRPGLVPDALRALDAAGVTMIAMQHQIRNVDVQFL
VDPRDFEAAVRALHKALVERDARTEEKRRAA----
>Hnep_Aa_|_CG-02
----------------------------MKRTVEKIGGTSISNTQVVLENVLIGGRKGAD
LYNRIFVVSAYSGMTNRLLEHKKSGE----PGVFSLFAGAGNKWAWTEALASVAEAMEAK
NAEMFSGEPEQAVADNFVRERIEDVRNCLIDLHRLCSYGQFRLDENLTTVKEVLSSLGEA
HSAFNTALLLQKHGVNARAVDLTAWRDERDLTMEERMEDALGGIDLSSELPIVTGYASSR
DGLVRQFGRGYTEVTFSRLAAFVQADEAIIHKEFHLSSADPNLVGQDRVRKIGLTNFDVA
DQLSNMGMEAVHPKAAKILRQAGIPLRVKNTFDPKDGGTVISADYAPENPRAEIVTGLKG
VFALEVFDQDMVGEKG-YDSTILDALTRHSIRIVSKCSNANTITHYIEGSRKALKRATAD
IETKLPGAEVSTSRVAIVSVIGADINVPGITAKALTALHEAEVPIIGLHQVSRKTDIQAV
IQEDDFDKAICALHEALVEQVSVATPRAEALRPAA
>Tcru_Ab_|_CG-02
----------------------MSNTQKTTLSVEKIGGTSMSDYQAVRDNIILYP---EN
FYNRIFVVSAYGGITDDLLEHKKTDQ----PGVYGLFANDDVDDDWRIALDQLSLKLNKI
NANLFSDDELRLKANDFIDERIAETKQLLNHLQDLCRHGHFSLESHLLTVRELLASLGEA
HSAWNLAHLLQTEGVNARFVDLTGWQADEALPLDAMIETHLGDIDFTKELPIVTGYTHCR
ENLMYTFDRGYSEMTFSRIAVLCQATEAVIHKEYHLSSADPRLVGEDNVVPIGKTNYDIA
DQLANLGMEAVHPRAAQGLRQAQIPLRIKNTFDPGHHGTIFTEDYVSEYPQVEIIAGMQH
LIALEVFDQEMMGQQGSYEKVIIDATNRLKCQVITKDFNANTITIYLKASLKKVKRLAEQ
LKQGLPTATINTSKVALASAMGSDMRIKGLLAKAVQTLFDQGINVEAIHQNTRQVEMQFF
VNETDYEKAVKALHTNLIEVHNHGKAICEH-----
>Pstu_Ab_|_CG-02
-----------------------------MHTVEKIGGTSMSRFEEVLDNIFIGRREGAA
LYQRIFVVSAYSGMTNLLLEHKKTGE----PGVYQRFADAQSEGAWREALEGVRQRMLAK
NAELFSSEYELHAANQFINSRIDDASECMHSLQKLCAYGHFQLSEHLMKVREMLASLGEA
HSAFNSVLALKQRGVNARLADLTGWQQEAPLPFEEMISSHFAGFDFSRELVVATGYTHCA
EGLMNTFDRGYSEITFAQIAAATGAREAIIHKEFHLSSADPNLVGADKVVTIGRTNYDVA
DQLSNLGMEAIHPRAAKTLRRAGVELRIKNAFEPEHGGTLISQDYKSEKPCVEIIAGRKD
VFGIEVFDQDMLGDIG-YDMEISKLLKQLKLYVVNKDSDANSITYYASGSRKLINRAARL
IEEQYPAAEVTVHNLAIVSAIGSDLKVKGILAKTVAALAEAGISIQAIHQSIRQVEMQCV
VNEEDYDAAIAALHRALIEPENHGDVIAAA-----
>Sdeg_Ab_|_CG-02
-----------------------------MLTVEKIGGTSMSDYLTVRDNVVLGPNGENP
TTGRILVVSAYGGMTDQLLEHKKSGK----AGVFAYFSSDEDAGSWREALNNVRQNMFQK
NAELFNSADAISKANVFIGERLDTAERCLEDLQRLCGHGHFSLEAHLSTVREMLASLGEA
HSARNMAELLKEEGVNARFVDLTGWNADKSLGMDEHILEQFKDVDLGNELPVVTGYAHCE
SGIMSTFDRGYSEMTFSRIAVLVQADEALIHKEYHLSSADPKVVGVDAAVPIGRTNYDVA
DQLANLGMEAIHPKAAKGLRQSNIPLRVKNTFEPDHNGTLITTDYVSEKPCVEIIAGKQA
VYAVECFNQDMVGDLLNFEQKIMQICQRFRCTHVTKDVNANTVTHYLSSNMKKIKRVQRE
LEEMFPESEINVKKVSIVSAIGSDMQVPGILAKTVGALADAGISVLAVHQSMRQVDMQFI
VEEAAYEAAVRALHKCLVEVHDHGIAICAA-----
>MARI_Ab_|_CG-02
--------------------------MMGQHTVEKIGGTSMSDYRSVRDNIIFKPTLVNN
MYQRVFVVSAYAGMTDKLLEHKKTGD----AGVFALFAQERKQNNWFPALQDVRAAMLEI
NHSLFEAGELRHKADAFLNSRLQEAQECLEDLHRLCQHGHFSISEHLATVREMLASLGEA
HSAWNTAHLLQRDGVNAVFVDLTGWNSPSHMSLDERILDAFKDVDLSKELPIATGYAHSE
TGLMSTFDRGYSEMTFSRIAVLTQAHEAVIHKEFHLSSADPRLVGESKAVPIGRTNYDVA
DQLANLGMEAIHPKAAKGLRQSGISLRVKNTFEPEHTGTLITGDYVSDAPCVEIIAGCRG
VFAVELFDQDMAGDIDKFDVDILKVLRQFHAHIIAKDINANTITHYLAINLKTLKRVMRV
LHERFADAEITQRKVAIVSAIGSDMKTTGMLAKAVKAIAEQEVNVLAMHQSMRQVDMQFV
VDEEDYEKAICSLHKELVEVHNHGRAICLAS----
>Dole_Ab_|_CG-02
---------------------------MGNHTVEKIGGTAMSQFDKVLDNIIVGDRKEKD
LYNRIIVVSAYGGITNELLEHKKTSD----SGVYSLFSKDDDSWAWGEAITRVGQRMCTI
NKGFEHLGLDVQLADRFVKERIEGVRSCLIDLTRLCSFGHFKLDEHLMTVREMLSAIGEA
HSAHNSYLILKSMGINARLMDLSGWMDTDQLSLDETIKKAFESVDVAEELPIVTGYTQCK
EGIMGSYDRGYTEITFSRIAVLTGAREGIIHKEYHLSSGDPKIIGEDRVETIGSTNYDVA
DQLSDLGMEAIHPGAARGLRKTDIPLRVKNVFEPDHPGTLITNDYRSTDARVEIIAGRKG
VTGIEVWDQDMVGRWD-HDLEMLKHLAAAKIRYLAKDTNANTLTHYIAAPLAKIKRLTDN
IKQDFPSADILVKKVALVSAIGTNMADTWVLPTAVHSLTNAGVEILGLHKCMRQVDIQFV
VDEKDFQNAICALHRDLVETGR-------------
>Mhyd_Ab_|_CG-02
-------------------------MTTAQHTVEKIGGTSMSNYEAVRDNIIIGKRKKSD
LYQRIFVVSAYGGVTNELLEHKKTGE----PGVYALFADAESDWAWGDDLTKLIQLLTDI
NGELFADPMLKQQADQFITDRIEGVRGCLIDLQRLCSYGQFQLEEHLLTVREMLAGIGEA
HSAFNTALKLQQEGINARFVDLTGWRDSELLPLDEKLKQAFDAIDLSRELPIVTGYAQCK
EGLMRTFDRGYSEMTFSRTAVITNAREAIIHKEYHLSSADPNIVGEDKVVPLGRTNYDVA
DQLANLGMEAIHPRAGKGLRQNEIPLRVMNTFEPEHTGTLITGDYVSEKPQVEIVAGAKG
VFAIEVFDQDMQGEPG-SDRRILDVLSRFKVRFMSKDTNANTITHYVDTTLKHVKRVVKA
LEEEFPNAEISTRKVALVSAIGSDMKVPGILARSVKSLADNDISVLAIHQCMRQVDIQFV
VDEDKYDQAIVALHGALIEPHNHEYAIVAASTTAG
>Noce_Ab_|_CG-02
---------------------------MNGHTVEKIGGTSMSRTQEVLDNILMGKRKEQE
LYNRIFVVSAYGGITDMLLEHKKSGA----SGVYALYAGAESDWAWGDLLNKVGERMCEI
NMEIFEDDLSCQKADQFVRERIEGVRSCLIDLHRLCSYGHFQLDEHLITVREMLAAIGEA
HSAFNTALLLQQHGVNAHFIDLTGWRELDNLTLEERIQQAFNSLDLARELPIVTGYPRCK
EGTMMIYDRGYSEITFSKIAVLTEAREAIIHKEYHLSSADPKVVDKDRVEPIGRTNYDVA
DQLSNLGMEAIHPKAAKGLRQCHIPLRVKNAFDPDHAGTLIDGDYKSDTPCVEIIAGRKG
VFAIEFFEQDMVGSSG-YDTQLLALLERFKLKIVAKDTNANTITHFVASSLKAIKRVTHA
MEDAFPSAAVAVRKVALVSAIGSNMQVPGLLSNAVSALAKADINILALHQSMRQVDMQFV
VDEKDYEEAIIHLHEHLIESYSLPAPRSVGAA---

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