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 <h3>Example </h3>  
   
 <p>Polymyxin resistance protein PmrJ, predicted deacetylase</p>  
 <p>A nice small family that you can compare to PFAM. There are two different views. The family centric view shows the whole family. The table that shows the other families that are also represented shows <em>all</em> families that are also related to the proteins in the table.</p>  
   
 <p>On the other hand, the protein centric view comes in from a single protein (e.g. if you have clicked a link from the protein page, and only shows you those other families that are related to this particular protein</p>.  
   
         <ol>  
         <li><a href="../proteinfamilies.cgi?family=fig|PF003364">family centric</a></li>  
         <li><a href="../proteinfamilies.cgi?user=$user&prot=fig|119912.1.peg.2301&equivalence=1">gene centric</a></li>  
         </ol>  
   
   
50  <h1>Other examples, not yet explored</h1>  <h1>Other examples, not yet explored</h1>
51    
52  <p>These examples are ones that are worth looking at and exploring. The comparisons were done with Family 1 NOT Family 2. The for and against are just as shown in the final tables, so you generally want a result with some "againsts" to look at. Also, the "Red" column is the number of cells that would be colored red (i.e. wrong).</p>  <p>These examples are ones that are worth looking at and exploring. The comparisons were done with Family 1 NOT Family 2. The for and against are just as shown in the final tables, so you generally want a result with some "againsts" to look at. Also, the "Red" column is the number of cells that would be colored red (i.e. wrong).</p>
53    
54  <h2>Histidine Biosynthesis compared to PIR</h2>  <h2>Histidine Biosynthesis compared to PIR</h2>
55  <table border=1>  <table border=1>
56  <tr><th>peg<th>Family 1</th><th>Family 2</th><th>For</th><th>Against</th><th>Red</th></tr>  <tr><th>Genome</th><th>peg</th><th>Family 1</th><th>Family 2</th><th>For</th><th>Against</th><th>Red</th></tr>
57  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1994" target="_blank">fig|83333.1.peg.1994</a> &nbsp; </td><td> &nbsp; fig|PF000056 &nbsp; </td><td> &nbsp; pir|PIRSF000486 &nbsp; </td><td> &nbsp; 18 &nbsp; </td><td> &nbsp; -7 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1994&equivalence=1" target="_blank">fig|83333.1.peg.1994</a></td><td>fig|PF000056</td><td>pir|PIRSF000486</td><td>18</td><td>-7</td><td>1</td></tr>
58  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|292459.1.peg.2713" target="_blank">fig|292459.1.peg.2713</a> &nbsp; </td><td> &nbsp; fig|PF000056 &nbsp; </td><td> &nbsp; pir|PIRSF006650 &nbsp; </td><td> &nbsp; 66 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Symbiobacterium thermophilum IAM 14863</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|292459.1.peg.2713&equivalence=1" target="_blank">fig|292459.1.peg.2713</a></td><td>fig|PF000056</td><td>pir|PIRSF006650</td><td>66</td><td>0</td><td>0</td></tr>
59  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.573" target="_blank">fig|272626.1.peg.573</a> &nbsp; </td><td> &nbsp; fig|PF003447 &nbsp; </td><td> &nbsp; pir|PIRSF006650 &nbsp; </td><td> &nbsp; 10 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.573&equivalence=1" target="_blank">fig|272626.1.peg.573</a></td><td>fig|PF003447</td><td>pir|PIRSF006650</td><td>10</td><td>0</td><td>0</td></tr>
60  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.574" target="_blank">fig|272626.1.peg.574</a> &nbsp; </td><td> &nbsp; fig|PF000991 &nbsp; </td><td> &nbsp; pir|PIRSF001549 &nbsp; </td><td> &nbsp; 19 &nbsp; </td><td> &nbsp; -7 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.574&equivalence=1" target="_blank">fig|272626.1.peg.574</a></td><td>fig|PF000991</td><td>pir|PIRSF001549</td><td>19</td><td>-7</td><td>2</td></tr>
61  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|243274.1.peg.1033" target="_blank">fig|243274.1.peg.1033</a> &nbsp; </td><td> &nbsp; fig|PF000991 &nbsp; </td><td> &nbsp; pir|PIRSF027379 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; -17 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Thermotoga maritima MSB8</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|243274.1.peg.1033&equivalence=1" target="_blank">fig|243274.1.peg.1033</a></td><td>fig|PF000991</td><td>pir|PIRSF027379</td><td>0</td><td>-17</td><td>1</td></tr>
62  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.2001" target="_blank">fig|83333.1.peg.2001</a> &nbsp; </td><td> &nbsp; fig|PF001505 &nbsp; </td><td> &nbsp; pir|PIRSF001258 &nbsp; </td><td> &nbsp; 108 &nbsp; </td><td> &nbsp; -147 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.2001&equivalence=1" target="_blank">fig|83333.1.peg.2001</a></td><td>fig|PF001505</td><td>pir|PIRSF001258</td><td>108</td><td>-147</td><td>2</td></tr>
63  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.2001" target="_blank">fig|83333.1.peg.2001</a> &nbsp; </td><td> &nbsp; fig|PF002226 &nbsp; </td><td> &nbsp; pir|PIRSF001258 &nbsp; </td><td> &nbsp; 111 &nbsp; </td><td> &nbsp; -155 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.2001&equivalence=1" target="_blank">fig|83333.1.peg.2001</a></td><td>fig|PF002226</td><td>pir|PIRSF001258</td><td>111</td><td>-155</td><td>2</td></tr>
64  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.566" target="_blank">fig|272626.1.peg.566</a> &nbsp; </td><td> &nbsp; fig|PF001505 &nbsp; </td><td> &nbsp; pir|PIRSF006833 &nbsp; </td><td> &nbsp; 120 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.566&equivalence=1" target="_blank">fig|272626.1.peg.566</a></td><td>fig|PF001505</td><td>pir|PIRSF006833</td><td>120</td><td>0</td><td>0</td></tr>
65  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.567" target="_blank">fig|272626.1.peg.567</a> &nbsp; </td><td> &nbsp; fig|PF002226 &nbsp; </td><td> &nbsp; pir|PIRSF029243 &nbsp; </td><td> &nbsp; 112 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.567&equivalence=1" target="_blank">fig|272626.1.peg.567</a></td><td>fig|PF002226</td><td>pir|PIRSF029243</td><td>112</td><td>0</td><td>0</td></tr>
66  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1999" target="_blank">fig|83333.1.peg.1999</a> &nbsp; </td><td> &nbsp; fig|PF002424 &nbsp; </td><td> &nbsp; pir|PIRSF001484 &nbsp; </td><td> &nbsp; 35 &nbsp; </td><td> &nbsp; -5 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1999&equivalence=1" target="_blank">fig|83333.1.peg.1999</a></td><td>fig|PF002424</td><td>pir|PIRSF001484</td><td>35</td><td>-5</td><td>3</td></tr>
67  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.2000" target="_blank">fig|83333.1.peg.2000</a> &nbsp; </td><td> &nbsp; fig|PF001996 &nbsp; </td><td> &nbsp; pir|PIRSF001454 &nbsp; </td><td> &nbsp; 15 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.2000&equivalence=1" target="_blank">fig|83333.1.peg.2000</a></td><td>fig|PF001996</td><td>pir|PIRSF001454</td><td>15</td><td>0</td><td>0</td></tr>
68  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|4896.1.peg.2360" target="_blank">fig|4896.1.peg.2360</a> &nbsp; </td><td> &nbsp; fig|PF001996 &nbsp; </td><td> &nbsp; pir|PIRSF036936 &nbsp; </td><td> &nbsp; 122 &nbsp; </td><td> &nbsp; -344 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Schizosaccharomyces pombe</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|4896.1.peg.2360&equivalence=1" target="_blank">fig|4896.1.peg.2360</a></td><td>fig|PF001996</td><td>pir|PIRSF036936</td><td>122</td><td>-344</td><td>3</td></tr>
69  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|4896.1.peg.2360" target="_blank">fig|4896.1.peg.2360</a> &nbsp; </td><td> &nbsp; fig|PF002743 &nbsp; </td><td> &nbsp; pir|PIRSF036936 &nbsp; </td><td> &nbsp; 241 &nbsp; </td><td> &nbsp; -339 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Schizosaccharomyces pombe</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|4896.1.peg.2360&equivalence=1" target="_blank">fig|4896.1.peg.2360</a></td><td>fig|PF002743</td><td>pir|PIRSF036936</td><td>241</td><td>-339</td><td>2</td></tr>
70  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1998" target="_blank">fig|83333.1.peg.1998</a> &nbsp; </td><td> &nbsp; fig|PF002743 &nbsp; </td><td> &nbsp; pir|PIRSF000495 &nbsp; </td><td> &nbsp; 7 &nbsp; </td><td> &nbsp; -2 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1998&equivalence=1" target="_blank">fig|83333.1.peg.1998</a></td><td>fig|PF002743</td><td>pir|PIRSF000495</td><td>7</td><td>-2</td><td>1</td></tr>
71  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1997" target="_blank">fig|83333.1.peg.1997</a> &nbsp; </td><td> &nbsp; fig|PF001687 &nbsp; </td><td> &nbsp; pir|PIRSF001410 &nbsp; </td><td> &nbsp; 27 &nbsp; </td><td> &nbsp; -81 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1997&equivalence=1" target="_blank">fig|83333.1.peg.1997</a></td><td>fig|PF001687</td><td>pir|PIRSF001410</td><td>27</td><td>-81</td><td>2</td></tr>
72  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1997" target="_blank">fig|83333.1.peg.1997</a> &nbsp; </td><td> &nbsp; fig|PF003299 &nbsp; </td><td> &nbsp; pir|PIRSF001410 &nbsp; </td><td> &nbsp; 290 &nbsp; </td><td> &nbsp; -156 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1997&equivalence=1" target="_blank">fig|83333.1.peg.1997</a></td><td>fig|PF003299</td><td>pir|PIRSF001410</td><td>290</td><td>-156</td><td>2</td></tr>
73  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.571" target="_blank">fig|272626.1.peg.571</a> &nbsp; </td><td> &nbsp; fig|PF003299 &nbsp; </td><td> &nbsp; pir|PIRSF001409 &nbsp; </td><td> &nbsp; 115 &nbsp; </td><td> &nbsp; -3 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.571&equivalence=1" target="_blank">fig|272626.1.peg.571</a></td><td>fig|PF003299</td><td>pir|PIRSF001409</td><td>115</td><td>-3</td><td>3</td></tr>
74  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1996" target="_blank">fig|83333.1.peg.1996</a> &nbsp; </td><td> &nbsp; fig|PF000244 &nbsp; </td><td> &nbsp; pir|PIRSF000518 &nbsp; </td><td> &nbsp; 316 &nbsp; </td><td> &nbsp; -5 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1996&equivalence=1" target="_blank">fig|83333.1.peg.1996</a></td><td>fig|PF000244</td><td>pir|PIRSF000518</td><td>316</td><td>-5</td><td>2</td></tr>
75  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.2026" target="_blank">fig|272626.1.peg.2026</a> &nbsp; </td><td> &nbsp; fig|PF000244 &nbsp; </td><td> &nbsp; pir|PIRSF006455 &nbsp; </td><td> &nbsp; 327 &nbsp; </td><td> &nbsp; -3 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.2026&equivalence=1" target="_blank">fig|272626.1.peg.2026</a></td><td>fig|PF000244</td><td>pir|PIRSF006455</td><td>327</td><td>-3</td><td>1</td></tr>
76  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272623.1.peg.1241" target="_blank">fig|272623.1.peg.1241</a> &nbsp; </td><td> &nbsp; fig|PF000244 &nbsp; </td><td> &nbsp; pir|PIRSF005473 &nbsp; </td><td> &nbsp; 374 &nbsp; </td><td> &nbsp; -5 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Lactococcus lactis subsp. lactis Il1403</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272623.1.peg.1241&equivalence=1" target="_blank">fig|272623.1.peg.1241</a></td><td>fig|PF000244</td><td>pir|PIRSF005473</td><td>374</td><td>-5</td><td>2</td></tr>
77  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.575" target="_blank">fig|272626.1.peg.575</a> &nbsp; </td><td> &nbsp; fig|PF001687 &nbsp; </td><td> &nbsp; pir|PIRSF019058 &nbsp; </td><td> &nbsp; 19 &nbsp; </td><td> &nbsp; -35 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.575&equivalence=1" target="_blank">fig|272626.1.peg.575</a></td><td>fig|PF001687</td><td>pir|PIRSF019058</td><td>19</td><td>-35</td><td>3</td></tr>
78  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|208964.1.peg.6" target="_blank">fig|208964.1.peg.6</a> &nbsp; </td><td> &nbsp; fig|PF001687 &nbsp; </td><td> &nbsp; pir|PIRSF004682 &nbsp; </td><td> &nbsp; 2 &nbsp; </td><td> &nbsp; -69 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Pseudomonas aeruginosa PAO1</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|208964.1.peg.6&equivalence=1" target="_blank">fig|208964.1.peg.6</a></td><td>fig|PF001687</td><td>pir|PIRSF004682</td><td>2</td><td>-69</td><td>3</td></tr>
79  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|4896.1.peg.210" target="_blank">fig|4896.1.peg.210</a> &nbsp; </td><td> &nbsp; fig|PF001687 &nbsp; </td><td> &nbsp; pir|PIRSF017203 &nbsp; </td><td> &nbsp; 38 &nbsp; </td><td> &nbsp; -37 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Schizosaccharomyces pombe</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|4896.1.peg.210&equivalence=1" target="_blank">fig|4896.1.peg.210</a></td><td>fig|PF001687</td><td>pir|PIRSF017203</td><td>38</td><td>-37</td><td>4</td></tr>
80  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|196164.1.peg.1995" target="_blank">fig|196164.1.peg.1995</a> &nbsp; </td><td> &nbsp; fig|PF003597 &nbsp; </td><td> &nbsp; pir|PIRSF004949 &nbsp; </td><td> &nbsp; 8 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Corynebacterium efficiens YS-314</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|196164.1.peg.1995&equivalence=1" target="_blank">fig|196164.1.peg.1995</a></td><td>fig|PF003597</td><td>pir|PIRSF004949</td><td>8</td><td>0</td><td>0</td></tr>
81  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|196164.1.peg.809" target="_blank">fig|196164.1.peg.809</a> &nbsp; </td><td> &nbsp; fig|PF003597 &nbsp; </td><td> &nbsp; pir|PIRSF500194 &nbsp; </td><td> &nbsp; 20 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Corynebacterium efficiens YS-314</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|196164.1.peg.809&equivalence=1" target="_blank">fig|196164.1.peg.809</a></td><td>fig|PF003597</td><td>pir|PIRSF500194</td><td>20</td><td>0</td><td>0</td></tr>
82  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1995" target="_blank">fig|83333.1.peg.1995</a> &nbsp; </td><td> &nbsp; fig|PF002941 &nbsp; </td><td> &nbsp; pir|PIRSF000099 &nbsp; </td><td> &nbsp; 11 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1995&equivalence=1" target="_blank">fig|83333.1.peg.1995</a></td><td>fig|PF002941</td><td>pir|PIRSF000099</td><td>11</td><td>0</td><td>0</td></tr>
83  </table>  </table>
84    
85  <h2>Histidine Biosynthesis compared to PFAM</h2>  <h2>Histidine Biosynthesis compared to PFAM</h2>
86    
87  <table border=1>  <table border=1>
88  <tr><th>peg<th>Family 1</th><th>Family 2</th><th>For</th><th>Against</th><th>Red</th></tr>  <tr><th>Genome</th><th>peg</th><th>Family 1</th><th>Family 2</th><th>For</th><th>Against</th><th>Red</th></tr>
89  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1994" target="_blank">fig|83333.1.peg.1994</a> &nbsp; </td><td> &nbsp; fig|PF000056 &nbsp; </td><td> &nbsp; pfam|PF08029.1 &nbsp; </td><td> &nbsp; 17 &nbsp; </td><td> &nbsp; -2 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1994&equivalence=1" target="_blank">fig|83333.1.peg.1994</a></td><td>fig|PF000056</td><td>pfam|PF08029.1</td><td>17</td><td>-2</td><td>1</td></tr>
90  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.573" target="_blank">fig|272626.1.peg.573</a> &nbsp; </td><td> &nbsp; fig|PF003447 &nbsp; </td><td> &nbsp; pfam|PF01634.8 &nbsp; </td><td> &nbsp; 2 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.573&equivalence=1" target="_blank">fig|272626.1.peg.573</a></td><td>fig|PF003447</td><td>pfam|PF01634.8</td><td>2</td><td>0</td><td>0</td></tr>
91  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.574" target="_blank">fig|272626.1.peg.574</a> &nbsp; </td><td> &nbsp; fig|PF000991 &nbsp; </td><td> &nbsp; pfam|PF00587.14 &nbsp; </td><td> &nbsp; 4 &nbsp; </td><td> &nbsp; -4 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.574&equivalence=1" target="_blank">fig|272626.1.peg.574</a></td><td>fig|PF000991</td><td>pfam|PF00587.14</td><td>4</td><td>-4</td><td>2</td></tr>
92  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.2001" target="_blank">fig|83333.1.peg.2001</a> &nbsp; </td><td> &nbsp; fig|PF001505 &nbsp; </td><td> &nbsp; pfam|PF01502.8 &nbsp; </td><td> &nbsp; 93 &nbsp; </td><td> &nbsp; -106 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.2001&equivalence=1" target="_blank">fig|83333.1.peg.2001</a></td><td>fig|PF001505</td><td>pfam|PF01502.8</td><td>93</td><td>-106</td><td>2</td></tr>
93  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.2001" target="_blank">fig|83333.1.peg.2001</a> &nbsp; </td><td> &nbsp; fig|PF001505 &nbsp; </td><td> &nbsp; pfam|PF01503.7 &nbsp; </td><td> &nbsp; 39 &nbsp; </td><td> &nbsp; -35 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.2001&equivalence=1" target="_blank">fig|83333.1.peg.2001</a></td><td>fig|PF001505</td><td>pfam|PF01503.7</td><td>39</td><td>-35</td><td>1</td></tr>
94  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.2001" target="_blank">fig|83333.1.peg.2001</a> &nbsp; </td><td> &nbsp; fig|PF002226 &nbsp; </td><td> &nbsp; pfam|PF01502.8 &nbsp; </td><td> &nbsp; 39 &nbsp; </td><td> &nbsp; -38 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.2001&equivalence=1" target="_blank">fig|83333.1.peg.2001</a></td><td>fig|PF002226</td><td>pfam|PF01502.8</td><td>39</td><td>-38</td><td>1</td></tr>
95  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.2001" target="_blank">fig|83333.1.peg.2001</a> &nbsp; </td><td> &nbsp; fig|PF002226 &nbsp; </td><td> &nbsp; pfam|PF01503.7 &nbsp; </td><td> &nbsp; 96 &nbsp; </td><td> &nbsp; -117 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.2001&equivalence=1" target="_blank">fig|83333.1.peg.2001</a></td><td>fig|PF002226</td><td>pfam|PF01503.7</td><td>96</td><td>-117</td><td>2</td></tr>
96  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|5141.1.peg.8508" target="_blank">fig|5141.1.peg.8508</a> &nbsp; </td><td> &nbsp; fig|PF001505 &nbsp; </td><td> &nbsp; pfam|PF00815.9 &nbsp; </td><td> &nbsp; 283 &nbsp; </td><td> &nbsp; -347 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Neurospora crassa</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|5141.1.peg.8508&equivalence=1" target="_blank">fig|5141.1.peg.8508</a></td><td>fig|PF001505</td><td>pfam|PF00815.9</td><td>283</td><td>-347</td><td>3</td></tr>
97  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|5141.1.peg.8508" target="_blank">fig|5141.1.peg.8508</a> &nbsp; </td><td> &nbsp; fig|PF002226 &nbsp; </td><td> &nbsp; pfam|PF00815.9 &nbsp; </td><td> &nbsp; 286 &nbsp; </td><td> &nbsp; -360 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Neurospora crassa</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|5141.1.peg.8508&equivalence=1" target="_blank">fig|5141.1.peg.8508</a></td><td>fig|PF002226</td><td>pfam|PF00815.9</td><td>286</td><td>-360</td><td>3</td></tr>
98  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|5141.1.peg.8508" target="_blank">fig|5141.1.peg.8508</a> &nbsp; </td><td> &nbsp; fig|PF002941 &nbsp; </td><td> &nbsp; pfam|PF00815.9 &nbsp; </td><td> &nbsp; 2 &nbsp; </td><td> &nbsp; -194 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Neurospora crassa</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|5141.1.peg.8508&equivalence=1" target="_blank">fig|5141.1.peg.8508</a></td><td>fig|PF002941</td><td>pfam|PF00815.9</td><td>2</td><td>-194</td><td>2</td></tr>
99  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|5141.1.peg.8508" target="_blank">fig|5141.1.peg.8508</a> &nbsp; </td><td> &nbsp; fig|PF002941 &nbsp; </td><td> &nbsp; pfam|PF01502.8 &nbsp; </td><td> &nbsp; 122 &nbsp; </td><td> &nbsp; -578 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Neurospora crassa</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|5141.1.peg.8508&equivalence=1" target="_blank">fig|5141.1.peg.8508</a></td><td>fig|PF002941</td><td>pfam|PF01502.8</td><td>122</td><td>-578</td><td>3</td></tr>
100  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|5141.1.peg.8508" target="_blank">fig|5141.1.peg.8508</a> &nbsp; </td><td> &nbsp; fig|PF002941 &nbsp; </td><td> &nbsp; pfam|PF01503.7 &nbsp; </td><td> &nbsp; 122 &nbsp; </td><td> &nbsp; -578 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Neurospora crassa</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|5141.1.peg.8508&equivalence=1" target="_blank">fig|5141.1.peg.8508</a></td><td>fig|PF002941</td><td>pfam|PF01503.7</td><td>122</td><td>-578</td><td>3</td></tr>
101  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|4896.1.peg.2360" target="_blank">fig|4896.1.peg.2360</a> &nbsp; </td><td> &nbsp; fig|PF001996 &nbsp; </td><td> &nbsp; pfam|PF00117.15 &nbsp; </td><td> &nbsp; 122 &nbsp; </td><td> &nbsp; -336 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Schizosaccharomyces pombe</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|4896.1.peg.2360&equivalence=1" target="_blank">fig|4896.1.peg.2360</a></td><td>fig|PF001996</td><td>pfam|PF00117.15</td><td>122</td><td>-336</td><td>3</td></tr>
102  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|4896.1.peg.2360" target="_blank">fig|4896.1.peg.2360</a> &nbsp; </td><td> &nbsp; fig|PF002743 &nbsp; </td><td> &nbsp; pfam|PF00117.15 &nbsp; </td><td> &nbsp; 1 &nbsp; </td><td> &nbsp; -78 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Schizosaccharomyces pombe</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|4896.1.peg.2360&equivalence=1" target="_blank">fig|4896.1.peg.2360</a></td><td>fig|PF002743</td><td>pfam|PF00117.15</td><td>1</td><td>-78</td><td>1</td></tr>
103  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|4896.1.peg.2360" target="_blank">fig|4896.1.peg.2360</a> &nbsp; </td><td> &nbsp; fig|PF002743 &nbsp; </td><td> &nbsp; pfam|PF00977.10 &nbsp; </td><td> &nbsp; 241 &nbsp; </td><td> &nbsp; -340 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Schizosaccharomyces pombe</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|4896.1.peg.2360&equivalence=1" target="_blank">fig|4896.1.peg.2360</a></td><td>fig|PF002743</td><td>pfam|PF00977.10</td><td>241</td><td>-340</td><td>2</td></tr>
104  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1997" target="_blank">fig|83333.1.peg.1997</a> &nbsp; </td><td> &nbsp; fig|PF001687 &nbsp; </td><td> &nbsp; pfam|PF00475.8 &nbsp; </td><td> &nbsp; 27 &nbsp; </td><td> &nbsp; -70 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1997&equivalence=1" target="_blank">fig|83333.1.peg.1997</a></td><td>fig|PF001687</td><td>pfam|PF00475.8</td><td>27</td><td>-70</td><td>2</td></tr>
105  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|83333.1.peg.1997" target="_blank">fig|83333.1.peg.1997</a> &nbsp; </td><td> &nbsp; fig|PF003299 &nbsp; </td><td> &nbsp; pfam|PF00475.8 &nbsp; </td><td> &nbsp; 27 &nbsp; </td><td> &nbsp; -59 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Escherichia coli K12</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|83333.1.peg.1997&equivalence=1" target="_blank">fig|83333.1.peg.1997</a></td><td>fig|PF003299</td><td>pfam|PF00475.8</td><td>27</td><td>-59</td><td>1</td></tr>
106  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|103690.1.peg.384" target="_blank">fig|103690.1.peg.384</a> &nbsp; </td><td> &nbsp; fig|PF003299 &nbsp; </td><td> &nbsp; pfam|PF00702.13 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; -62 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Nostoc sp. PCC 7120</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|103690.1.peg.384&equivalence=1" target="_blank">fig|103690.1.peg.384</a></td><td>fig|PF003299</td><td>pfam|PF00702.13</td><td>0</td><td>-62</td><td>2</td></tr>
107  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|243265.1.peg.1484" target="_blank">fig|243265.1.peg.1484</a> &nbsp; </td><td> &nbsp; fig|PF000244 &nbsp; </td><td> &nbsp; pfam|PF00815.9 &nbsp; </td><td> &nbsp; 264 &nbsp; </td><td> &nbsp; -399 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Photorhabdus luminescens subsp. laumondii TTO1</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|243265.1.peg.1484&equivalence=1" target="_blank">fig|243265.1.peg.1484</a></td><td>fig|PF000244</td><td>pfam|PF00815.9</td><td>264</td><td>-399</td><td>3</td></tr>
108  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|243265.1.peg.1484" target="_blank">fig|243265.1.peg.1484</a> &nbsp; </td><td> &nbsp; fig|PF002941 &nbsp; </td><td> &nbsp; pfam|PF00155.9 &nbsp; </td><td> &nbsp; 239 &nbsp; </td><td> &nbsp; -347 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Photorhabdus luminescens subsp. laumondii TTO1</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|243265.1.peg.1484&equivalence=1" target="_blank">fig|243265.1.peg.1484</a></td><td>fig|PF002941</td><td>pfam|PF00155.9</td><td>239</td><td>-347</td><td>2</td></tr>
109  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272626.1.peg.575" target="_blank">fig|272626.1.peg.575</a> &nbsp; </td><td> &nbsp; fig|PF001687 &nbsp; </td><td> &nbsp; pfam|PF02811.7 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; -35 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Listeria innocua Clip11262</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272626.1.peg.575&equivalence=1" target="_blank">fig|272626.1.peg.575</a></td><td>fig|PF001687</td><td>pfam|PF02811.7</td><td>0</td><td>-35</td><td>3</td></tr>
110  </table>  </table>
111    
112  <h2>Leucine Degradation compared to PIR</h2>  <h2>Leucine Degradation compared to PIR</h2>
113    
114  <table border=1>  <table border=1>
115  <tr><th>peg<th>Family 1</th><th>Family 2</th><th>For</th><th>Against</th><th>Red</th></tr>  <tr><th>Genome</th><th>peg</th><th>Family 1</th><th>Family 2</th><th>For</th><th>Against</th><th>Red</th></tr>
116  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.3860" target="_blank">fig|224308.1.peg.3860</a> &nbsp; </td><td> &nbsp; fig|PF002066 &nbsp; </td><td> &nbsp; pir|PIRSF006468 &nbsp; </td><td> &nbsp; 188 &nbsp; </td><td> &nbsp; -4 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.3860&equivalence=1" target="_blank">fig|224308.1.peg.3860</a></td><td>fig|PF002066</td><td>pir|PIRSF006468</td><td>188</td><td>-4</td><td>1</td></tr>
117  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|198094.1.peg.1301" target="_blank">fig|198094.1.peg.1301</a> &nbsp; </td><td> &nbsp; fig|PF002066 &nbsp; </td><td> &nbsp; pir|PIRSF000523 &nbsp; </td><td> &nbsp; 123 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Bacillus anthracis str. Ames</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|198094.1.peg.1301&equivalence=1" target="_blank">fig|198094.1.peg.1301</a></td><td>fig|PF002066</td><td>pir|PIRSF000523</td><td>123</td><td>0</td><td>0</td></tr>
118  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2409" target="_blank">fig|224308.1.peg.2409</a> &nbsp; </td><td> &nbsp; fig|PF001207 &nbsp; </td><td> &nbsp; pir|PIRSF000152 &nbsp; </td><td> &nbsp; 26 &nbsp; </td><td> &nbsp; -14 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2409&equivalence=1" target="_blank">fig|224308.1.peg.2409</a></td><td>fig|PF001207</td><td>pir|PIRSF000152</td><td>26</td><td>-14</td><td>1</td></tr>
119  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2409" target="_blank">fig|224308.1.peg.2409</a> &nbsp; </td><td> &nbsp; fig|PF002751 &nbsp; </td><td> &nbsp; pir|PIRSF000152 &nbsp; </td><td> &nbsp; 23 &nbsp; </td><td> &nbsp; -3 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2409&equivalence=1" target="_blank">fig|224308.1.peg.2409</a></td><td>fig|PF002751</td><td>pir|PIRSF000152</td><td>23</td><td>-3</td><td>1</td></tr>
120  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272558.1.peg.213" target="_blank">fig|272558.1.peg.213</a> &nbsp; </td><td> &nbsp; fig|PF001158 &nbsp; </td><td> &nbsp; pir|PIRSF000152 &nbsp; </td><td> &nbsp; 31 &nbsp; </td><td> &nbsp; -147 &nbsp; </td><td> &nbsp; 5 &nbsp; </td></tr>  <tr><td>Bacillus halodurans C-125</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272558.1.peg.213&equivalence=1" target="_blank">fig|272558.1.peg.213</a></td><td>fig|PF001158</td><td>pir|PIRSF000152</td><td>31</td><td>-147</td><td>5</td></tr>
121  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2408" target="_blank">fig|224308.1.peg.2408</a> &nbsp; </td><td> &nbsp; fig|PF000067 &nbsp; </td><td> &nbsp; pir|PIRSF000155 &nbsp; </td><td> &nbsp; 37 &nbsp; </td><td> &nbsp; -2 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2408&equivalence=1" target="_blank">fig|224308.1.peg.2408</a></td><td>fig|PF000067</td><td>pir|PIRSF000155</td><td>37</td><td>-2</td><td>1</td></tr>
122  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2408" target="_blank">fig|224308.1.peg.2408</a> &nbsp; </td><td> &nbsp; fig|PF001487 &nbsp; </td><td> &nbsp; pir|PIRSF000155 &nbsp; </td><td> &nbsp; 41 &nbsp; </td><td> &nbsp; -29 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2408&equivalence=1" target="_blank">fig|224308.1.peg.2408</a></td><td>fig|PF001487</td><td>pir|PIRSF000155</td><td>41</td><td>-29</td><td>1</td></tr>
123  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|258594.1.peg.2850" target="_blank">fig|258594.1.peg.2850</a> &nbsp; </td><td> &nbsp; fig|PF000067 &nbsp; </td><td> &nbsp; pir|PIRSF036563 &nbsp; </td><td> &nbsp; 149 &nbsp; </td><td> &nbsp; -110 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Rhodopseudomonas palustris CGA009</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|258594.1.peg.2850&equivalence=1" target="_blank">fig|258594.1.peg.2850</a></td><td>fig|PF000067</td><td>pir|PIRSF036563</td><td>149</td><td>-110</td><td>3</td></tr>
124  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|258594.1.peg.2850" target="_blank">fig|258594.1.peg.2850</a> &nbsp; </td><td> &nbsp; fig|PF001487 &nbsp; </td><td> &nbsp; pir|PIRSF036563 &nbsp; </td><td> &nbsp; 195 &nbsp; </td><td> &nbsp; -236 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Rhodopseudomonas palustris CGA009</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|258594.1.peg.2850&equivalence=1" target="_blank">fig|258594.1.peg.2850</a></td><td>fig|PF001487</td><td>pir|PIRSF036563</td><td>195</td><td>-236</td><td>3</td></tr>
125  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|258594.1.peg.2850" target="_blank">fig|258594.1.peg.2850</a> &nbsp; </td><td> &nbsp; fig|PF002666 &nbsp; </td><td> &nbsp; pir|PIRSF036563 &nbsp; </td><td> &nbsp; 137 &nbsp; </td><td> &nbsp; -279 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Rhodopseudomonas palustris CGA009</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|258594.1.peg.2850&equivalence=1" target="_blank">fig|258594.1.peg.2850</a></td><td>fig|PF002666</td><td>pir|PIRSF036563</td><td>137</td><td>-279</td><td>3</td></tr>
126  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2407" target="_blank">fig|224308.1.peg.2407</a> &nbsp; </td><td> &nbsp; fig|PF001388 &nbsp; </td><td> &nbsp; pir|PIRSF000432 &nbsp; </td><td> &nbsp; 31 &nbsp; </td><td> &nbsp; -1 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2407&equivalence=1" target="_blank">fig|224308.1.peg.2407</a></td><td>fig|PF001388</td><td>pir|PIRSF000432</td><td>31</td><td>-1</td><td>1</td></tr>
127  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|211586.1.peg.2120" target="_blank">fig|211586.1.peg.2120</a> &nbsp; </td><td> &nbsp; fig|PF001388 &nbsp; </td><td> &nbsp; pir|PIRSF000433 &nbsp; </td><td> &nbsp; 132 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Shewanella oneidensis MR-1</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|211586.1.peg.2120&equivalence=1" target="_blank">fig|211586.1.peg.2120</a></td><td>fig|PF001388</td><td>pir|PIRSF000433</td><td>132</td><td>0</td><td>0</td></tr>
128  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|227882.1.peg.4367" target="_blank">fig|227882.1.peg.4367</a> &nbsp; </td><td> &nbsp; fig|PF001864 &nbsp; </td><td> &nbsp; pir|PIRSF000432 &nbsp; </td><td> &nbsp; 197 &nbsp; </td><td> &nbsp; -176 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Streptomyces avermitilis MA-4680</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|227882.1.peg.4367&equivalence=1" target="_blank">fig|227882.1.peg.4367</a></td><td>fig|PF001864</td><td>pir|PIRSF000432</td><td>197</td><td>-176</td><td>4</td></tr>
129  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1463" target="_blank">fig|224308.1.peg.1463</a> &nbsp; </td><td> &nbsp; fig|PF003391 &nbsp; </td><td> &nbsp; pir|PIRSF000210 &nbsp; </td><td> &nbsp; 164 &nbsp; </td><td> &nbsp; -10 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1463&equivalence=1" target="_blank">fig|224308.1.peg.1463</a></td><td>fig|PF003391</td><td>pir|PIRSF000210</td><td>164</td><td>-10</td><td>4</td></tr>
130  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224914.1.peg.145" target="_blank">fig|224914.1.peg.145</a> &nbsp; </td><td> &nbsp; fig|PF000100 &nbsp; </td><td> &nbsp; pir|PIRSF000210 &nbsp; </td><td> &nbsp; 22 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Brucella melitensis 16M</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224914.1.peg.145&equivalence=1" target="_blank">fig|224914.1.peg.145</a></td><td>fig|PF000100</td><td>pir|PIRSF000210</td><td>22</td><td>0</td><td>0</td></tr>
131  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|257310.1.peg.2524" target="_blank">fig|257310.1.peg.2524</a> &nbsp; </td><td> &nbsp; fig|PF003391 &nbsp; </td><td> &nbsp; pir|PIRSF000212 &nbsp; </td><td> &nbsp; 769 &nbsp; </td><td> &nbsp; -263 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Bordetella bronchiseptica RB50</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|257310.1.peg.2524&equivalence=1" target="_blank">fig|257310.1.peg.2524</a></td><td>fig|PF003391</td><td>pir|PIRSF000212</td><td>769</td><td>-263</td><td>4</td></tr>
132  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|119219.1.peg.4104" target="_blank">fig|119219.1.peg.4104</a> &nbsp; </td><td> &nbsp; fig|PF003391 &nbsp; </td><td> &nbsp; pir|PIRSF000350 &nbsp; </td><td> &nbsp; 840 &nbsp; </td><td> &nbsp; -288 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Ralstonia metallidurans CH34</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|119219.1.peg.4104&equivalence=1" target="_blank">fig|119219.1.peg.4104</a></td><td>fig|PF003391</td><td>pir|PIRSF000350</td><td>840</td><td>-288</td><td>4</td></tr>
133  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1830" target="_blank">fig|224308.1.peg.1830</a> &nbsp; </td><td> &nbsp; fig|PF000094 &nbsp; </td><td> &nbsp; pir|PIRSF000182 &nbsp; </td><td> &nbsp; 518 &nbsp; </td><td> &nbsp; -427 &nbsp; </td><td> &nbsp; 5 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1830&equivalence=1" target="_blank">fig|224308.1.peg.1830</a></td><td>fig|PF000094</td><td>pir|PIRSF000182</td><td>518</td><td>-427</td><td>5</td></tr>
134  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1830" target="_blank">fig|224308.1.peg.1830</a> &nbsp; </td><td> &nbsp; fig|PF002044 &nbsp; </td><td> &nbsp; pir|PIRSF000182 &nbsp; </td><td> &nbsp; 183 &nbsp; </td><td> &nbsp; -27 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1830&equivalence=1" target="_blank">fig|224308.1.peg.1830</a></td><td>fig|PF002044</td><td>pir|PIRSF000182</td><td>183</td><td>-27</td><td>2</td></tr>
135  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224914.1.peg.1924" target="_blank">fig|224914.1.peg.1924</a> &nbsp; </td><td> &nbsp; fig|PF001705 &nbsp; </td><td> &nbsp; pir|PIRSF001591 &nbsp; </td><td> &nbsp; 102 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Brucella melitensis 16M</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224914.1.peg.1924&equivalence=1" target="_blank">fig|224914.1.peg.1924</a></td><td>fig|PF001705</td><td>pir|PIRSF001591</td><td>102</td><td>0</td><td>0</td></tr>
136  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1824" target="_blank">fig|224308.1.peg.1824</a> &nbsp; </td><td> &nbsp; fig|PF003427 &nbsp; </td><td> &nbsp; pir|PIRSF001593 &nbsp; </td><td> &nbsp; 36 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1824&equivalence=1" target="_blank">fig|224308.1.peg.1824</a></td><td>fig|PF003427</td><td>pir|PIRSF001593</td><td>36</td><td>0</td><td>0</td></tr>
137  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1825" target="_blank">fig|224308.1.peg.1825</a> &nbsp; </td><td> &nbsp; fig|PF000095 &nbsp; </td><td> &nbsp; pir|PIRSF001406 &nbsp; </td><td> &nbsp; 5 &nbsp; </td><td> &nbsp; -1 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1825&equivalence=1" target="_blank">fig|224308.1.peg.1825</a></td><td>fig|PF000095</td><td>pir|PIRSF001406</td><td>5</td><td>-1</td><td>0</td></tr>
138  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1826" target="_blank">fig|224308.1.peg.1826</a> &nbsp; </td><td> &nbsp; fig|PF000193 &nbsp; </td><td> &nbsp; pir|PIRSF001367 &nbsp; </td><td> &nbsp; 13 &nbsp; </td><td> &nbsp; -7 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1826&equivalence=1" target="_blank">fig|224308.1.peg.1826</a></td><td>fig|PF000193</td><td>pir|PIRSF001367</td><td>13</td><td>-7</td><td>3</td></tr>
139  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|262316.1.peg.2310" target="_blank">fig|262316.1.peg.2310</a> &nbsp; </td><td> &nbsp; fig|PF000193 &nbsp; </td><td> &nbsp; pir|PIRSF015582 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; -42 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Mycobacterium avium subsp. paratuberculosis str. k10</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|262316.1.peg.2310&equivalence=1" target="_blank">fig|262316.1.peg.2310</a></td><td>fig|PF000193</td><td>pir|PIRSF015582</td><td>0</td><td>-42</td><td>1</td></tr>
140  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1829" target="_blank">fig|224308.1.peg.1829</a> &nbsp; </td><td> &nbsp; fig|PF000104 &nbsp; </td><td> &nbsp; pir|PIRSF001552 &nbsp; </td><td> &nbsp; 291 &nbsp; </td><td> &nbsp; -584 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1829&equivalence=1" target="_blank">fig|224308.1.peg.1829</a></td><td>fig|PF000104</td><td>pir|PIRSF001552</td><td>291</td><td>-584</td><td>3</td></tr>
141  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1829" target="_blank">fig|224308.1.peg.1829</a> &nbsp; </td><td> &nbsp; fig|PF001188 &nbsp; </td><td> &nbsp; pir|PIRSF001552 &nbsp; </td><td> &nbsp; 29 &nbsp; </td><td> &nbsp; -41 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1829&equivalence=1" target="_blank">fig|224308.1.peg.1829</a></td><td>fig|PF001188</td><td>pir|PIRSF001552</td><td>29</td><td>-41</td><td>3</td></tr>
142  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272558.1.peg.1137" target="_blank">fig|272558.1.peg.1137</a> &nbsp; </td><td> &nbsp; fig|PF001188 &nbsp; </td><td> &nbsp; pir|PIRSF001550 &nbsp; </td><td> &nbsp; 30 &nbsp; </td><td> &nbsp; -11 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Bacillus halodurans C-125</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272558.1.peg.1137&equivalence=1" target="_blank">fig|272558.1.peg.1137</a></td><td>fig|PF001188</td><td>pir|PIRSF001550</td><td>30</td><td>-11</td><td>2</td></tr>
143  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.3904" target="_blank">fig|224308.1.peg.3904</a> &nbsp; </td><td> &nbsp; fig|PF000160 &nbsp; </td><td> &nbsp; pir|PIRSF000859 &nbsp; </td><td> &nbsp; 15 &nbsp; </td><td> &nbsp; -13 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.3904&equivalence=1" target="_blank">fig|224308.1.peg.3904</a></td><td>fig|PF000160</td><td>pir|PIRSF000859</td><td>15</td><td>-13</td><td>1</td></tr>
144  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.3904" target="_blank">fig|224308.1.peg.3904</a> &nbsp; </td><td> &nbsp; fig|PF000359 &nbsp; </td><td> &nbsp; pir|PIRSF000859 &nbsp; </td><td> &nbsp; 13 &nbsp; </td><td> &nbsp; -25 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.3904&equivalence=1" target="_blank">fig|224308.1.peg.3904</a></td><td>fig|PF000359</td><td>pir|PIRSF000859</td><td>13</td><td>-25</td><td>1</td></tr>
145  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|262316.1.peg.3861" target="_blank">fig|262316.1.peg.3861</a> &nbsp; </td><td> &nbsp; fig|PF000359 &nbsp; </td><td> &nbsp; pir|PIRSF000858 &nbsp; </td><td> &nbsp; 28 &nbsp; </td><td> &nbsp; -99 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Mycobacterium avium subsp. paratuberculosis str. k10</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|262316.1.peg.3861&equivalence=1" target="_blank">fig|262316.1.peg.3861</a></td><td>fig|PF000359</td><td>pir|PIRSF000858</td><td>28</td><td>-99</td><td>2</td></tr>
146  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|262316.1.peg.3861" target="_blank">fig|262316.1.peg.3861</a> &nbsp; </td><td> &nbsp; fig|PF000530 &nbsp; </td><td> &nbsp; pir|PIRSF000858 &nbsp; </td><td> &nbsp; 57 &nbsp; </td><td> &nbsp; -74 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Mycobacterium avium subsp. paratuberculosis str. k10</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|262316.1.peg.3861&equivalence=1" target="_blank">fig|262316.1.peg.3861</a></td><td>fig|PF000530</td><td>pir|PIRSF000858</td><td>57</td><td>-74</td><td>2</td></tr>
147  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|262316.1.peg.3861" target="_blank">fig|262316.1.peg.3861</a> &nbsp; </td><td> &nbsp; fig|PF003527 &nbsp; </td><td> &nbsp; pir|PIRSF000858 &nbsp; </td><td> &nbsp; 57 &nbsp; </td><td> &nbsp; -64 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Mycobacterium avium subsp. paratuberculosis str. k10</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|262316.1.peg.3861&equivalence=1" target="_blank">fig|262316.1.peg.3861</a></td><td>fig|PF003527</td><td>pir|PIRSF000858</td><td>57</td><td>-64</td><td>2</td></tr>
148  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.3903" target="_blank">fig|224308.1.peg.3903</a> &nbsp; </td><td> &nbsp; fig|PF000530 &nbsp; </td><td> &nbsp; pir|PIRSF012663 &nbsp; </td><td> &nbsp; 16 &nbsp; </td><td> &nbsp; -21 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.3903&equivalence=1" target="_blank">fig|224308.1.peg.3903</a></td><td>fig|PF000530</td><td>pir|PIRSF012663</td><td>16</td><td>-21</td><td>1</td></tr>
149  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.3903" target="_blank">fig|224308.1.peg.3903</a> &nbsp; </td><td> &nbsp; fig|PF003527 &nbsp; </td><td> &nbsp; pir|PIRSF012663 &nbsp; </td><td> &nbsp; 13 &nbsp; </td><td> &nbsp; -7 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.3903&equivalence=1" target="_blank">fig|224308.1.peg.3903</a></td><td>fig|PF003527</td><td>pir|PIRSF012663</td><td>13</td><td>-7</td><td>1</td></tr>
150  <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1717" target="_blank">fig|224308.1.peg.1717</a> &nbsp; </td><td> &nbsp; fig|PF001265 &nbsp; </td><td> &nbsp; pir|PIRSF500082 &nbsp; </td><td> &nbsp; 6 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1717&equivalence=1" target="_blank">fig|224308.1.peg.1717</a></td><td>fig|PF001265</td><td>pir|PIRSF500082</td><td>6</td><td>0</td><td>0</td></tr>
151  </table>  </table>
152    
153  <h2>Leucine Degradation compared to PFAM</h2>  <h2>Leucine Degradation compared to PFAM</h2>
154    
155   <table border=1>   <table border=1>
156   <tr><th>peg<th>Family 1</th><th>Family 2</th><th>For</th><th>Against</th><th>Red</th></tr>  <tr><th>Genome</th><th>peg</th><th>Family 1</th><th>Family 2</th><th>For</th><th>Against</th><th>Red</th></tr>
157   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.3860" target="_blank">fig|224308.1.peg.3860</a> &nbsp; </td><td> &nbsp; fig|PF002066 &nbsp; </td><td> &nbsp; pfam|PF01063.8 &nbsp; </td><td> &nbsp; 3 &nbsp; </td><td> &nbsp; -1 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.3860&equivalence=1" target="_blank">fig|224308.1.peg.3860</a></td><td>fig|PF002066</td><td>pfam|PF01063.8</td><td>3</td><td>-1</td><td>0</td></tr>
158   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2409" target="_blank">fig|224308.1.peg.2409</a> &nbsp; </td><td> &nbsp; fig|PF001207 &nbsp; </td><td> &nbsp; pfam|PF00676.9 &nbsp; </td><td> &nbsp; 16 &nbsp; </td><td> &nbsp; -11 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2409&equivalence=1" target="_blank">fig|224308.1.peg.2409</a></td><td>fig|PF001207</td><td>pfam|PF00676.9</td><td>16</td><td>-11</td><td>1</td></tr>
159   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2409" target="_blank">fig|224308.1.peg.2409</a> &nbsp; </td><td> &nbsp; fig|PF002751 &nbsp; </td><td> &nbsp; pfam|PF00676.9 &nbsp; </td><td> &nbsp; 16 &nbsp; </td><td> &nbsp; -3 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2409&equivalence=1" target="_blank">fig|224308.1.peg.2409</a></td><td>fig|PF002751</td><td>pfam|PF00676.9</td><td>16</td><td>-3</td><td>1</td></tr>
160   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|272558.1.peg.213" target="_blank">fig|272558.1.peg.213</a> &nbsp; </td><td> &nbsp; fig|PF001158 &nbsp; </td><td> &nbsp; pfam|PF00676.9 &nbsp; </td><td> &nbsp; 11 &nbsp; </td><td> &nbsp; -122 &nbsp; </td><td> &nbsp; 5 &nbsp; </td></tr>  <tr><td>Bacillus halodurans C-125</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|272558.1.peg.213&equivalence=1" target="_blank">fig|272558.1.peg.213</a></td><td>fig|PF001158</td><td>pfam|PF00676.9</td><td>11</td><td>-122</td><td>5</td></tr>
161   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2408" target="_blank">fig|224308.1.peg.2408</a> &nbsp; </td><td> &nbsp; fig|PF000067 &nbsp; </td><td> &nbsp; pfam|PF02779.12 &nbsp; </td><td> &nbsp; 17 &nbsp; </td><td> &nbsp; -1 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2408&equivalence=1" target="_blank">fig|224308.1.peg.2408</a></td><td>fig|PF000067</td><td>pfam|PF02779.12</td><td>17</td><td>-1</td><td>1</td></tr>
162   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2408" target="_blank">fig|224308.1.peg.2408</a> &nbsp; </td><td> &nbsp; fig|PF000067 &nbsp; </td><td> &nbsp; pfam|PF02780.9 &nbsp; </td><td> &nbsp; 17 &nbsp; </td><td> &nbsp; -1 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2408&equivalence=1" target="_blank">fig|224308.1.peg.2408</a></td><td>fig|PF000067</td><td>pfam|PF02780.9</td><td>17</td><td>-1</td><td>1</td></tr>
163   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2408" target="_blank">fig|224308.1.peg.2408</a> &nbsp; </td><td> &nbsp; fig|PF001487 &nbsp; </td><td> &nbsp; pfam|PF02779.12 &nbsp; </td><td> &nbsp; 17 &nbsp; </td><td> &nbsp; -26 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2408&equivalence=1" target="_blank">fig|224308.1.peg.2408</a></td><td>fig|PF001487</td><td>pfam|PF02779.12</td><td>17</td><td>-26</td><td>1</td></tr>
164   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.2408" target="_blank">fig|224308.1.peg.2408</a> &nbsp; </td><td> &nbsp; fig|PF001487 &nbsp; </td><td> &nbsp; pfam|PF02780.9 &nbsp; </td><td> &nbsp; 17 &nbsp; </td><td> &nbsp; -26 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.2408&equivalence=1" target="_blank">fig|224308.1.peg.2408</a></td><td>fig|PF001487</td><td>pfam|PF02780.9</td><td>17</td><td>-26</td><td>1</td></tr>
165   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224914.1.peg.2120" target="_blank">fig|224914.1.peg.2120</a> &nbsp; </td><td> &nbsp; fig|PF000067 &nbsp; </td><td> &nbsp; pfam|PF00676.9 &nbsp; </td><td> &nbsp; 145 &nbsp; </td><td> &nbsp; -3 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Brucella melitensis 16M</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224914.1.peg.2120&equivalence=1" target="_blank">fig|224914.1.peg.2120</a></td><td>fig|PF000067</td><td>pfam|PF00676.9</td><td>145</td><td>-3</td><td>1</td></tr>
166   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224914.1.peg.2120" target="_blank">fig|224914.1.peg.2120</a> &nbsp; </td><td> &nbsp; fig|PF001487 &nbsp; </td><td> &nbsp; pfam|PF00676.9 &nbsp; </td><td> &nbsp; 190 &nbsp; </td><td> &nbsp; -56 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Brucella melitensis 16M</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224914.1.peg.2120&equivalence=1" target="_blank">fig|224914.1.peg.2120</a></td><td>fig|PF001487</td><td>pfam|PF00676.9</td><td>190</td><td>-56</td><td>1</td></tr>
167   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|258594.1.peg.2850" target="_blank">fig|258594.1.peg.2850</a> &nbsp; </td><td> &nbsp; fig|PF000067 &nbsp; </td><td> &nbsp; pfam|PF00364.11 &nbsp; </td><td> &nbsp; 149 &nbsp; </td><td> &nbsp; -106 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Rhodopseudomonas palustris CGA009</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|258594.1.peg.2850&equivalence=1" target="_blank">fig|258594.1.peg.2850</a></td><td>fig|PF000067</td><td>pfam|PF00364.11</td><td>149</td><td>-106</td><td>3</td></tr>
168   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|258594.1.peg.2850" target="_blank">fig|258594.1.peg.2850</a> &nbsp; </td><td> &nbsp; fig|PF001487 &nbsp; </td><td> &nbsp; pfam|PF00364.11 &nbsp; </td><td> &nbsp; 195 &nbsp; </td><td> &nbsp; -233 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Rhodopseudomonas palustris CGA009</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|258594.1.peg.2850&equivalence=1" target="_blank">fig|258594.1.peg.2850</a></td><td>fig|PF001487</td><td>pfam|PF00364.11</td><td>195</td><td>-233</td><td>3</td></tr>
169   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|258594.1.peg.2850" target="_blank">fig|258594.1.peg.2850</a> &nbsp; </td><td> &nbsp; fig|PF002666 &nbsp; </td><td> &nbsp; pfam|PF00364.11 &nbsp; </td><td> &nbsp; 137 &nbsp; </td><td> &nbsp; -279 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Rhodopseudomonas palustris CGA009</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|258594.1.peg.2850&equivalence=1" target="_blank">fig|258594.1.peg.2850</a></td><td>fig|PF002666</td><td>pfam|PF00364.11</td><td>137</td><td>-279</td><td>3</td></tr>
170   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|258594.1.peg.2850" target="_blank">fig|258594.1.peg.2850</a> &nbsp; </td><td> &nbsp; fig|PF002666 &nbsp; </td><td> &nbsp; pfam|PF02779.12 &nbsp; </td><td> &nbsp; 1 &nbsp; </td><td> &nbsp; -67 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Rhodopseudomonas palustris CGA009</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|258594.1.peg.2850&equivalence=1" target="_blank">fig|258594.1.peg.2850</a></td><td>fig|PF002666</td><td>pfam|PF02779.12</td><td>1</td><td>-67</td><td>2</td></tr>
171   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|258594.1.peg.2850" target="_blank">fig|258594.1.peg.2850</a> &nbsp; </td><td> &nbsp; fig|PF002666 &nbsp; </td><td> &nbsp; pfam|PF02780.9 &nbsp; </td><td> &nbsp; 1 &nbsp; </td><td> &nbsp; -67 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Rhodopseudomonas palustris CGA009</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|258594.1.peg.2850&equivalence=1" target="_blank">fig|258594.1.peg.2850</a></td><td>fig|PF002666</td><td>pfam|PF02780.9</td><td>1</td><td>-67</td><td>2</td></tr>
172   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|227377.1.peg.612" target="_blank">fig|227377.1.peg.612</a> &nbsp; </td><td> &nbsp; fig|PF001864 &nbsp; </td><td> &nbsp; pfam|PF00198.12 &nbsp; </td><td> &nbsp; 9 &nbsp; </td><td> &nbsp; -94 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Coxiella burnetii RSA 493</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|227377.1.peg.612&equivalence=1" target="_blank">fig|227377.1.peg.612</a></td><td>fig|PF001864</td><td>pfam|PF00198.12</td><td>9</td><td>-94</td><td>1</td></tr>
173   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|227377.1.peg.612" target="_blank">fig|227377.1.peg.612</a> &nbsp; </td><td> &nbsp; fig|PF001864 &nbsp; </td><td> &nbsp; pfam|PF00364.11 &nbsp; </td><td> &nbsp; 11 &nbsp; </td><td> &nbsp; -98 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Coxiella burnetii RSA 493</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|227377.1.peg.612&equivalence=1" target="_blank">fig|227377.1.peg.612</a></td><td>fig|PF001864</td><td>pfam|PF00364.11</td><td>11</td><td>-98</td><td>2</td></tr>
174   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|227377.1.peg.612" target="_blank">fig|227377.1.peg.612</a> &nbsp; </td><td> &nbsp; fig|PF001864 &nbsp; </td><td> &nbsp; pfam|PF02817.6 &nbsp; </td><td> &nbsp; 11 &nbsp; </td><td> &nbsp; -99 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Coxiella burnetii RSA 493</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|227377.1.peg.612&equivalence=1" target="_blank">fig|227377.1.peg.612</a></td><td>fig|PF001864</td><td>pfam|PF02817.6</td><td>11</td><td>-99</td><td>2</td></tr>
175   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1463" target="_blank">fig|224308.1.peg.1463</a> &nbsp; </td><td> &nbsp; fig|PF003391 &nbsp; </td><td> &nbsp; pfam|PF00070.16 &nbsp; </td><td> &nbsp; 4 &nbsp; </td><td> &nbsp; -3 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1463&equivalence=1" target="_blank">fig|224308.1.peg.1463</a></td><td>fig|PF003391</td><td>pfam|PF00070.16</td><td>4</td><td>-3</td><td>2</td></tr>
176   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1463" target="_blank">fig|224308.1.peg.1463</a> &nbsp; </td><td> &nbsp; fig|PF003391 &nbsp; </td><td> &nbsp; pfam|PF07992.2 &nbsp; </td><td> &nbsp; 4 &nbsp; </td><td> &nbsp; -3 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1463&equivalence=1" target="_blank">fig|224308.1.peg.1463</a></td><td>fig|PF003391</td><td>pfam|PF07992.2</td><td>4</td><td>-3</td><td>2</td></tr>
177   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1463" target="_blank">fig|224308.1.peg.1463</a> &nbsp; </td><td> &nbsp; fig|PF003391 &nbsp; </td><td> &nbsp; pfam|PF02852.11 &nbsp; </td><td> &nbsp; 19 &nbsp; </td><td> &nbsp; -2 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1463&equivalence=1" target="_blank">fig|224308.1.peg.1463</a></td><td>fig|PF003391</td><td>pfam|PF02852.11</td><td>19</td><td>-2</td><td>1</td></tr>
178   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224914.1.peg.145" target="_blank">fig|224914.1.peg.145</a> &nbsp; </td><td> &nbsp; fig|PF000100 &nbsp; </td><td> &nbsp; pfam|PF00070.16 &nbsp; </td><td> &nbsp; 22 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Brucella melitensis 16M</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224914.1.peg.145&equivalence=1" target="_blank">fig|224914.1.peg.145</a></td><td>fig|PF000100</td><td>pfam|PF00070.16</td><td>22</td><td>0</td><td>0</td></tr>
179   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224914.1.peg.145" target="_blank">fig|224914.1.peg.145</a> &nbsp; </td><td> &nbsp; fig|PF000100 &nbsp; </td><td> &nbsp; pfam|PF07992.2 &nbsp; </td><td> &nbsp; 22 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Brucella melitensis 16M</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224914.1.peg.145&equivalence=1" target="_blank">fig|224914.1.peg.145</a></td><td>fig|PF000100</td><td>pfam|PF07992.2</td><td>22</td><td>0</td><td>0</td></tr>
180   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224914.1.peg.145" target="_blank">fig|224914.1.peg.145</a> &nbsp; </td><td> &nbsp; fig|PF000100 &nbsp; </td><td> &nbsp; pfam|PF02852.11 &nbsp; </td><td> &nbsp; 22 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; 0 &nbsp; </td></tr>  <tr><td>Brucella melitensis 16M</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224914.1.peg.145&equivalence=1" target="_blank">fig|224914.1.peg.145</a></td><td>fig|PF000100</td><td>pfam|PF02852.11</td><td>22</td><td>0</td><td>0</td></tr>
181   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|257310.1.peg.2524" target="_blank">fig|257310.1.peg.2524</a> &nbsp; </td><td> &nbsp; fig|PF003391 &nbsp; </td><td> &nbsp; pfam|PF00364.11 &nbsp; </td><td> &nbsp; 765 &nbsp; </td><td> &nbsp; -255 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Bordetella bronchiseptica RB50</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|257310.1.peg.2524&equivalence=1" target="_blank">fig|257310.1.peg.2524</a></td><td>fig|PF003391</td><td>pfam|PF00364.11</td><td>765</td><td>-255</td><td>4</td></tr>
182   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|119219.1.peg.4104" target="_blank">fig|119219.1.peg.4104</a> &nbsp; </td><td> &nbsp; fig|PF003391 &nbsp; </td><td> &nbsp; pfam|PF00403.14 &nbsp; </td><td> &nbsp; 840 &nbsp; </td><td> &nbsp; -281 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Ralstonia metallidurans CH34</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|119219.1.peg.4104&equivalence=1" target="_blank">fig|119219.1.peg.4104</a></td><td>fig|PF003391</td><td>pfam|PF00403.14</td><td>840</td><td>-281</td><td>4</td></tr>
183   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1830" target="_blank">fig|224308.1.peg.1830</a> &nbsp; </td><td> &nbsp; fig|PF000094 &nbsp; </td><td> &nbsp; pfam|PF00441.13 &nbsp; </td><td> &nbsp; 37 &nbsp; </td><td> &nbsp; -219 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1830&equivalence=1" target="_blank">fig|224308.1.peg.1830</a></td><td>fig|PF000094</td><td>pfam|PF00441.13</td><td>37</td><td>-219</td><td>4</td></tr>
184   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1830" target="_blank">fig|224308.1.peg.1830</a> &nbsp; </td><td> &nbsp; fig|PF000094 &nbsp; </td><td> &nbsp; pfam|PF02770.8 &nbsp; </td><td> &nbsp; 82 &nbsp; </td><td> &nbsp; -247 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1830&equivalence=1" target="_blank">fig|224308.1.peg.1830</a></td><td>fig|PF000094</td><td>pfam|PF02770.8</td><td>82</td><td>-247</td><td>4</td></tr>
185   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1830" target="_blank">fig|224308.1.peg.1830</a> &nbsp; </td><td> &nbsp; fig|PF000094 &nbsp; </td><td> &nbsp; pfam|PF02771.6 &nbsp; </td><td> &nbsp; 104 &nbsp; </td><td> &nbsp; -250 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1830&equivalence=1" target="_blank">fig|224308.1.peg.1830</a></td><td>fig|PF000094</td><td>pfam|PF02771.6</td><td>104</td><td>-250</td><td>4</td></tr>
186   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1830" target="_blank">fig|224308.1.peg.1830</a> &nbsp; </td><td> &nbsp; fig|PF002044 &nbsp; </td><td> &nbsp; pfam|PF00441.13 &nbsp; </td><td> &nbsp; 17 &nbsp; </td><td> &nbsp; -11 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1830&equivalence=1" target="_blank">fig|224308.1.peg.1830</a></td><td>fig|PF002044</td><td>pfam|PF00441.13</td><td>17</td><td>-11</td><td>1</td></tr>
187   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1830" target="_blank">fig|224308.1.peg.1830</a> &nbsp; </td><td> &nbsp; fig|PF002044 &nbsp; </td><td> &nbsp; pfam|PF02770.8 &nbsp; </td><td> &nbsp; 17 &nbsp; </td><td> &nbsp; -11 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1830&equivalence=1" target="_blank">fig|224308.1.peg.1830</a></td><td>fig|PF002044</td><td>pfam|PF02770.8</td><td>17</td><td>-11</td><td>1</td></tr>
188   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1830" target="_blank">fig|224308.1.peg.1830</a> &nbsp; </td><td> &nbsp; fig|PF002044 &nbsp; </td><td> &nbsp; pfam|PF02771.6 &nbsp; </td><td> &nbsp; 19 &nbsp; </td><td> &nbsp; -12 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1830&equivalence=1" target="_blank">fig|224308.1.peg.1830</a></td><td>fig|PF002044</td><td>pfam|PF02771.6</td><td>19</td><td>-12</td><td>1</td></tr>
189   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|227882.1.peg.5280" target="_blank">fig|227882.1.peg.5280</a> &nbsp; </td><td> &nbsp; fig|PF003232 &nbsp; </td><td> &nbsp; pfam|PF02785.8 &nbsp; </td><td> &nbsp; 2 &nbsp; </td><td> &nbsp; -30 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Streptomyces avermitilis MA-4680</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|227882.1.peg.5280&equivalence=1" target="_blank">fig|227882.1.peg.5280</a></td><td>fig|PF003232</td><td>pfam|PF02785.8</td><td>2</td><td>-30</td><td>4</td></tr>
190   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|227882.1.peg.5280" target="_blank">fig|227882.1.peg.5280</a> &nbsp; </td><td> &nbsp; fig|PF003232 &nbsp; </td><td> &nbsp; pfam|PF00364.11 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; -21 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Streptomyces avermitilis MA-4680</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|227882.1.peg.5280&equivalence=1" target="_blank">fig|227882.1.peg.5280</a></td><td>fig|PF003232</td><td>pfam|PF00364.11</td><td>0</td><td>-21</td><td>4</td></tr>
191   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|227882.1.peg.5280" target="_blank">fig|227882.1.peg.5280</a> &nbsp; </td><td> &nbsp; fig|PF003232 &nbsp; </td><td> &nbsp; pfam|PF00289.11 &nbsp; </td><td> &nbsp; 2 &nbsp; </td><td> &nbsp; -30 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Streptomyces avermitilis MA-4680</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|227882.1.peg.5280&equivalence=1" target="_blank">fig|227882.1.peg.5280</a></td><td>fig|PF003232</td><td>pfam|PF00289.11</td><td>2</td><td>-30</td><td>4</td></tr>
192   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|227882.1.peg.5280" target="_blank">fig|227882.1.peg.5280</a> &nbsp; </td><td> &nbsp; fig|PF003232 &nbsp; </td><td> &nbsp; pfam|PF02786.6 &nbsp; </td><td> &nbsp; 2 &nbsp; </td><td> &nbsp; -30 &nbsp; </td><td> &nbsp; 4 &nbsp; </td></tr>  <tr><td>Streptomyces avermitilis MA-4680</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|227882.1.peg.5280&equivalence=1" target="_blank">fig|227882.1.peg.5280</a></td><td>fig|PF003232</td><td>pfam|PF02786.6</td><td>2</td><td>-30</td><td>4</td></tr>
193   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1826" target="_blank">fig|224308.1.peg.1826</a> &nbsp; </td><td> &nbsp; fig|PF000193 &nbsp; </td><td> &nbsp; pfam|PF00682.8 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; -7 &nbsp; </td><td> &nbsp; 3 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1826&equivalence=1" target="_blank">fig|224308.1.peg.1826</a></td><td>fig|PF000193</td><td>pfam|PF00682.8</td><td>0</td><td>-7</td><td>3</td></tr>
194   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|262316.1.peg.2310" target="_blank">fig|262316.1.peg.2310</a> &nbsp; </td><td> &nbsp; fig|PF000193 &nbsp; </td><td> &nbsp; pfam|PF03328.4 &nbsp; </td><td> &nbsp; 0 &nbsp; </td><td> &nbsp; -34 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Mycobacterium avium subsp. paratuberculosis str. k10</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|262316.1.peg.2310&equivalence=1" target="_blank">fig|262316.1.peg.2310</a></td><td>fig|PF000193</td><td>pfam|PF03328.4</td><td>0</td><td>-34</td><td>1</td></tr>
195   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1829" target="_blank">fig|224308.1.peg.1829</a> &nbsp; </td><td> &nbsp; fig|PF000104 &nbsp; </td><td> &nbsp; pfam|PF00501.15 &nbsp; </td><td> &nbsp; 4 &nbsp; </td><td> &nbsp; -280 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1829&equivalence=1" target="_blank">fig|224308.1.peg.1829</a></td><td>fig|PF000104</td><td>pfam|PF00501.15</td><td>4</td><td>-280</td><td>1</td></tr>
196   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.1829" target="_blank">fig|224308.1.peg.1829</a> &nbsp; </td><td> &nbsp; fig|PF001188 &nbsp; </td><td> &nbsp; pfam|PF00501.15 &nbsp; </td><td> &nbsp; 5 &nbsp; </td><td> &nbsp; -11 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.1829&equivalence=1" target="_blank">fig|224308.1.peg.1829</a></td><td>fig|PF001188</td><td>pfam|PF00501.15</td><td>5</td><td>-11</td><td>1</td></tr>
197   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.3904" target="_blank">fig|224308.1.peg.3904</a> &nbsp; </td><td> &nbsp; fig|PF000160 &nbsp; </td><td> &nbsp; pfam|PF01144.12 &nbsp; </td><td> &nbsp; 9 &nbsp; </td><td> &nbsp; -11 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.3904&equivalence=1" target="_blank">fig|224308.1.peg.3904</a></td><td>fig|PF000160</td><td>pfam|PF01144.12</td><td>9</td><td>-11</td><td>1</td></tr>
198   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|224308.1.peg.3904" target="_blank">fig|224308.1.peg.3904</a> &nbsp; </td><td> &nbsp; fig|PF000359 &nbsp; </td><td> &nbsp; pfam|PF01144.12 &nbsp; </td><td> &nbsp; 7 &nbsp; </td><td> &nbsp; -19 &nbsp; </td><td> &nbsp; 1 &nbsp; </td></tr>  <tr><td>Bacillus subtilis subsp. subtilis str. 168</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|224308.1.peg.3904&equivalence=1" target="_blank">fig|224308.1.peg.3904</a></td><td>fig|PF000359</td><td>pfam|PF01144.12</td><td>7</td><td>-19</td><td>1</td></tr>
199   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|262316.1.peg.3861" target="_blank">fig|262316.1.peg.3861</a> &nbsp; </td><td> &nbsp; fig|PF000530 &nbsp; </td><td> &nbsp; pfam|PF01144.12 &nbsp; </td><td> &nbsp; 12 &nbsp; </td><td> &nbsp; -38 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Mycobacterium avium subsp. paratuberculosis str. k10</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|262316.1.peg.3861&equivalence=1" target="_blank">fig|262316.1.peg.3861</a></td><td>fig|PF000530</td><td>pfam|PF01144.12</td><td>12</td><td>-38</td><td>2</td></tr>
200   <tr><td> &nbsp; <a href="../protein.cgi?prot=fig|262316.1.peg.3861" target="_blank">fig|262316.1.peg.3861</a> &nbsp; </td><td> &nbsp; fig|PF003527 &nbsp; </td><td> &nbsp; pfam|PF01144.12 &nbsp; </td><td> &nbsp; 9 &nbsp; </td><td> &nbsp; -23 &nbsp; </td><td> &nbsp; 2 &nbsp; </td></tr>  <tr><td>Mycobacterium avium subsp. paratuberculosis str. k10</td><td><a href="../proteinfamilies.cgi?user=&prot=fig|262316.1.peg.3861&equivalence=1" target="_blank">fig|262316.1.peg.3861</a></td><td>fig|PF003527</td><td>pfam|PF01144.12</td><td>9</td><td>-23</td><td>2</td></tr>
201   </table>   </table>
202    
   
   
   
   
   
   

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