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File (rev) Rev. Age Author Last log entry
 Parent Directory        
spacetree-1.6/        
css/        
workonss.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
wac_login.png  1.1  11 years  parrello  Common images.
tyrASubsystem.html  1.9  12 years  disz  Added SEED link
tyrACGTree.html  1.5  12 years  disz  Latest Jensen changes
trash.ico  1.1  11 years  parrello  Common images.
tjpzoom.js  1.1  12 years  hwang  This file is free to use & created by http://tjp.hu
title.png  1.1  11 years  parrello  Common images.
subsystem_small.gif  1.1  13 years  paczian  *** empty log message ***
subsystem.jpg  1.1  13 years  olson  New stuff from Toby.
subsys_hope_kegg_integration.html  1.2  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
similarity_region_colors.html  1.1  15 years  golsen  Description of colors of sims regions
similarities_options.html  1.4  14 years  golsen  Add options to Similarities to override Max expand when asking for FIG IDs. It g...
seedtips.html  1.8  12 years  redwards  adding Ross help on making trees
seed.gif  1.1  14 years  mkubal  w/buttons
sand.ico  1.1  11 years  parrello  Sandbox icon.
robots.txt  1.1  12 years  olson  Add robots.txt support.
processsavedassign.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
power.jpg  1.1  13 years  olson  New stuff from Toby.
plus.gif  1.1  13 years  parrello  Added for tree control.
pir.html  1.6  14 years  redwards  Added creation of the download file from pir.cgi
p2p_updates.html  1.1  15 years  overbeek  p2p doc
overlap.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
notinss.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
nmpdrlogo3b-smaller.png  1.1  11 years  parrello  Added for new Wiki.
nmpdr.js  1.1  11 years  parrello  Javascript for Wiki pages.
nmpdr.gif  1.1  14 years  mkubal  w/buttons
mm_menu.js  1.1  13 years  hwang  dnd file are for the attributes drag and drop features. mm_menu.js is for tyra m...
minus.gif  1.1  13 years  parrello  Added for tree control.
mcslogo.gif  1.1  14 years  parrello  no message
locatepegs.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
layout2.js  1.1  13 years  paczian  *** empty log message ***
layout.js  1.9  12 years  paczian  fixed minor bugs
html.tail  1.1.1.1  15 years  efrank   import
html.hdr  1.20  11 years  olson  Remove link to kaput subsys.info.
help_front_page.html  1.1  14 years  olson  Help for new frontpage.
help_for_assignments_and_rules.html  1.2  15 years  overbeek  fixes from DOE meeting
help_RobE.html  1.5  13 years  redwards  adding metagenomics help
group_name_desc_seq.html  1.2  12 years  disz  Jensen file
gff.html  1.1  13 years  overbeek  RAE: Adding the gff help html
genome.jpg  1.1  13 years  olson  New stuff from Toby.
gene.jpg  1.1  13 years  olson  New stuff from Toby.
gbrowse.gif  1.1  14 years  mkubal  w/buttons
function_colors.html  1.1  14 years  golsen  Explain the new colors for the function in protein similarities
frame.tmpl  1.5  13 years  paczian  *** empty log message ***
frame.css  1.8  13 years  paczian  fixed table style
enqueue.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
drag_and_drop.js  1.2  13 years  hwang  dnd file are for the attributes drag and drop features. mm_menu.js is for tyra m...
dnd.css  1.3  13 years  hwang  dnd file are for the attributes drag and drop features. mm_menu.js is for tyra m...
diagram_overlay.png  1.4  14 years  olson  Transparent green.
dfc_ifc_notes.html  1.2  13 years  overbeek  RAE: updating IFC/DFC
cyanoseed_tail.html  1.1  14 years  redwards  another piece for the css and stuff
cyanoseed.tail  1.1  14 years  redwards  Initial commit of organisms.cgi which allows separate entry pages for different ...
conflict_resolution.html  1.3  14 years  redwards  adding help functions all over the place
cluster.jpg  1.1  13 years  olson  New stuff from Toby.
checkss.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
button-ss.png  1.1  14 years  olson  New buttons.
button-seed.png  1.1  14 years  olson  New buttons for Nmpdr search results page.
button-search.png  1.1  14 years  olson  Add more icons.
button-s.png  1.2  14 years  olson  Make some buttons transparent.
button-pins-2.png  1.1  14 years  olson  New buttons.
button-pins-1.png  1.1  14 years  olson  New buttons.
button-nmpdr.png  1.1  14 years  olson  New buttons for Nmpdr search results page.
button-h.png  1.1  11 years  parrello  Hint button graphic.
button-gbrowse.png  1.1  14 years  olson  New buttons for Nmpdr search results page.
button-g.png  1.2  14 years  olson  Make some buttons transparent.
button-fc.png  1.2  14 years  olson  Make some buttons transparent.
button-cl.png  1.1  14 years  olson  New buttons.
blank.html  1.1  14 years  parrello  no message
assviat.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
assign.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
arrow2.jpg  1.1  12 years  hwang  Adding files on TyrA from Carol/Jensen
arrow1.jpg  1.1  12 years  hwang  Adding files on TyrA from Carol/Jensen
arrow.jpg  1.1  12 years  hwang   TyrAPanels is all panels from Carol/Jensen.
annotation.jpg  1.1  14 years  redwards  HTML pages describing conflict resolution
TyrARep.html  1.7  12 years  disz  Latest Jensen changes
TyrAPanels.html  1.5  12 years  disz  Latest Jensen changes
TyrAExtended.html  1.14  12 years  disz  Latest Jensen changes
TestForms.html  1.34  11 years  parrello  Fixed links to point to anno-2. Removed obsolete helpers.
StyleTest.html  1.1  14 years  parrello  Converted "htm" web pages to "html" pages.
SproutTest.html  1.19  13 years  parrello  Made the frames adjustable.
SproutBase.html  1.1  14 years  parrello  no message
SimplePage.html  1.1  14 years  parrello  *** empty log message ***
SimProcess.gif  1.1  14 years  parrello  Added diagrams used by the Similarity Block documentation.
SimMatch.gif  1.1  14 years  parrello  Added diagrams used by the Similarity Block documentation.
SimBlockSnipFragment.html  1.1  14 years  parrello  Cleaned up formatting of similarity block web pages,
SimBlockPiecesFragment.html  1.2  13 years  parrello  Converted to a form that allows the user to request the display of a block.
SimBlockPieces.html  1.2  13 years  parrello  Converted to a form that allows the user to request the display of a block.
SimBlockPatternRow.html  1.3  13 years  parrello  Converted to a pure template approach.
SimBlockPattern.html  1.3  13 years  parrello  Converted to a pure template approach.
SimBlockGenomeFragment.html  1.2  14 years  parrello  *** empty log message ***
SimBlockForm.html  1.3  13 years  parrello  Converted to a pure template approach.
SimBlockDisplay.html  1.3  13 years  parrello  *** empty log message ***
SimBlockDiagram.gif  1.1  14 years  parrello  Added diagrams used by the Similarity Block documentation.
README  1.1.1.1  15 years  efrank   import
Protein_tmpl.html  1.22  13 years  overbeek  Indexing and page template fixes.
ProteinFamiliesExamples.html  1.3  13 years  overbeek  RAE: Changes to Protein Families
ProteinFamilies.html  1.6  13 years  overbeek  RAE: correcting space in command
NMPDR.css  1.9  11 years  parrello  Added new form styles.
Makefile  1.11  11 years  disz  Added Subdirs
ListThing.png  1.1  13 years  parrello  Added for tree control.
Homologs_tmpl.html  1.5  13 years  parrello  Converted to new template syntax.
Google.gif  1.1  11 years  parrello  New Wiki button.
Georgia.css  1.23  12 years  parrello  Added code-marking styles.
FigBG.jpg  1.1  14 years  parrello  no message
FigBG.gif  1.1  14 years  parrello  no message
FIGsmall.png  1.1  14 years  parrello  no message
FIGsmall.gif  1.6  14 years  parrello  no message
FIGBG.png  1.1  14 years  parrello  no message
FIG.html  1.2  15 years  overbeek  not-for-profit -> nonprofit
FIG.gif  1.3  14 years  olson  Recommit unbroken of these, with binary flag turned on.
ErrorPage.html  1.3  14 years  parrello  Converted "htm" web pages to "html" pages.
DocIndex.html  1.1  14 years  parrello  Converted "htm" web pages to "html" pages.
DirectoryTemplate.html  1.2  13 years  parrello  Converted to new template syntax.
Directory.php  1.1  14 years  parrello  *** empty log message ***
DebugFragment.html  1.3  13 years  parrello  Removed the obsolete "Show Mode" debugging tool.
DataFlow.html  1.1  14 years  parrello  no message
DataFlow.gif  1.1  14 years  parrello  no message
Constructs.html  1.2  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
CompleteSeedGenomes.html  1.2  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
CompareTyrAPanels.html  1.6  12 years  hwang  Added fig headers
CCluster_tmpl.html  1.6  13 years  parrello  Converted to new template syntax.
Basic_tmpl.html  1.1  13 years  parrello  Added for use by the testing utilities.
Attributes_tmpl.html  1.7  12 years  parrello  Fixed a bad style sheet link.
Attributes.html  1.8  13 years  overbeek  RAE: moving PIRSF to links
ArrowThing.png  1.1  13 years  parrello  Added for tree control.
AlignmentRow.html  1.1  14 years  parrello  *** empty log message ***
700_Fig5_9_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_8_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_7_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_6_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_5_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_4_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_3_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_2_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_1_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_1To9Mini58CG832006.jpg  1.1  12 years  hwang  JPGS are from Carol's TyrA. Html pages were changed to fix layout
700_Fig5_18_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_17_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_16_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_15_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_14_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_13_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_12_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_11_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_10_1252006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig5_10To18Mini58CG832006.jpg  1.3  12 years  disz  Latest Jensen changes
700_Fig1_58o348CGColor_832006.jpg  1.2  12 years  hwang  additional jpeg changes.
48-title.png  1.5  11 years  parrello  Human rhinovirus infections normally last only 7 days, but with homeopathic reme...
48-queued.png  1.5  11 years  parrello  Human rhinovirus infections normally last only 7 days, but with homeopathic reme...
48-not_started.png  1.5  11 years  parrello  Human rhinovirus infections normally last only 7 days, but with homeopathic reme...
48-info.png  1.5  11 years  parrello  Human rhinovirus infections normally last only 7 days, but with homeopathic reme...
48-in_progress.png  1.5  11 years  parrello  Human rhinovirus infections normally last only 7 days, but with homeopathic reme...
48-error.png  1.5  11 years  parrello  Human rhinovirus infections normally last only 7 days, but with homeopathic reme...
48-complete.png  1.5  11 years  parrello  Human rhinovirus infections normally last only 7 days, but with homeopathic reme...

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