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Revision 1.2 - (download) (as text) (annotate)
Thu Jun 10 13:39:16 2004 UTC (15 years, 5 months ago) by olson
Branch: MAIN
CVS Tags: merge-bodev_news-3, rast_rel_2014_0912, rast_rel_2008_06_18, rast_rel_2008_06_16, rast_rel_2008_07_21, rast_rel_2010_0928, rast_2008_0924, Root-bobdev_news, rast_rel_2008_09_30, caBIG-13Feb06-00, rast_rel_2010_0526, rast_rel_2014_0729, merge-trunktag-bobdev_news-1, rast_rel_2009_05_18, caBIG-05Apr06-00, rast_rel_2009_0925, rast_rel_2010_1206, rast_rel_2010_0118, caBIG-00-00-00, rast_rel_2009_02_05, rast_rel_2011_0119, rast_rel_2008_12_18, merge-trunktag-bodev_news-3, merge-bobdev_news-2, merge-bobdev_news-1, rast_rel_2008_10_09, rast_release_2008_09_29, rast_rel_2008_04_23, rast_rel_2008_08_07, rast_rel_2009_07_09, rast_rel_2010_0827, myrast_33, rast_rel_2011_0928, rast_rel_2008_09_29, rast_rel_2008_10_29, rast_rel_2009_03_26, merge-trunktag-bobdev_news-2, rast_rel_2008_11_24, HEAD
Branch point for: Branch-bobdev_news
Changes since 1.1: +1 -15 lines
clean up tutorial code

use FIG;
my $fig = new FIG;
use Sim;

use strict;
my($usage,$map,$genome,$name,$role,$peg,$func,$expanded_role);

$usage = "usage: connect_map_to_genes Map Genome";

(
 ($map    = shift @ARGV) &&
 ($genome = shift @ARGV)
)
    || die $usage;

$name = $fig->map_name($map);
print "$map\t$name\n";
foreach $role ($fig->map_to_ecs($map))
{
    print "  $role\n";
    foreach $peg ($fig->seqs_with_role($role,"master",$genome))
    {
	$func = $fig->function_of($peg);
	print "    $peg\t$func\n";
    }
}

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