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Index of /FigTutorial

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File Rev. Age Author Last log entry
 Parent Directory        
DataMining.examples/        
RAST_Supplement/        
add_link.py  1.1  15 years  disz  Python version of tutorial code
test_member.pl  1.1  10 years  disz  test scripts for the streaming figfam server
gf2maps_and_subs.py  1.1  15 years  disz  New tutorial code in python
test_place.pl  1.1  10 years  disz  test scripts for the streaming figfam server
annotations_of.py  1.1  15 years  disz  Python version of tutorial code
prot  1.1  10 years  disz  test data for the figfam server test scripts
test_dna.pl  1.1  10 years  disz  test scripts for the streaming figfam server
genomes.ex.py  1.1  15 years  disz  Python version of tutorial code
foo.py  1.1  15 years  disz  Python version of tutorial code
seq_utils.py  1.1  15 years  disz  Python version of tutorial code
features_around.py  1.1  15 years  disz  Python version of tutorial code
test_subsystem.pl  1.1  10 years  disz  test driver for the subsystem server
dna  1.1  10 years  disz  test data for the figfam server test scripts
show_similarities.py  1.1  15 years  disz  Python version of tutorial code
connect_subsystem_to_genes_the_right_way.py  1.1  15 years  disz  more python tutorial code
test_should.pl  1.1  10 years  disz  test scripts for the streaming figfam server
show_functional_coupling.py  1.1  15 years  disz  Python version of tutorial code
test_prot.pl  1.1  10 years  disz  test scripts for the streaming figfam server
test_all  1.1  10 years  disz  test scripts for the streaming figfam server
test_allfam.pl  1.1  10 years  disz  test scripts for the streaming figfam server
connect_map_to_genes.py  1.1  15 years  disz  Python version of tutorial code
list_complete_eukaryotic_genomes.py  1.1  15 years  disz  Python version of tutorial code
contigs_for_genome.py  1.1  15 years  disz  Python version of tutorial code
connect_subsystem_to_genes.py  1.1  15 years  disz  Python version of tutorial code
MetabolicReconstructions.html  1.2  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
scan_for_matches_README.html  1.2  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
SEED_functions.html  1.3  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
batch_assignments.pl  1.3  11 years  golsen  Move writing of assignment annotation from a case-by-case basis (and it was miss...
API.html  1.4  11 years  golsen  Move writing of assignment annotation from a case-by-case basis (and it was miss...
1KG.html  1.5  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
about_HOPSS.html  1.3  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
connect_subsystem_to_genes_the_right_way.pl  1.1  15 years  olson  new one
gf2maps_and_subs.pl  1.2  15 years  olson  clean up tutorial code
show_similarities.pl  1.2  15 years  olson  clean up tutorial code
contigs_for_genome.pl  1.2  15 years  olson  Remove tool_hdr-generated stuff. Remove ^M's.
connect_subsystem_to_genes.pl  1.2  15 years  olson  clean up tutorial code
features_around.pl  1.2  15 years  olson  Remove tool_hdr-generated stuff. Remove ^M's.
connect_map_to_genes.pl  1.2  15 years  olson  clean up tutorial code
seq_utils.pl  1.3  15 years  olson  clean up tutorial code
add_link.pl  1.2  15 years  olson  Remove tool_hdr-generated stuff. Remove ^M's.
list_complete_eukaryotic_genomes.pl  1.2  15 years  olson  clean up tutorial code
Makefile  1.7  11 years  olson  install all the other webpagy kind of things.
genomes.ex.pl  1.2  15 years  olson  Remove tool_hdr-generated stuff. Remove ^M's.
get_subsystem_cell.pl  1.2  15 years  olson  clean up tutorial code
annotations_of.pl  1.2  15 years  olson  clean up tutorial code
show_functional_coupling.pl  1.2  15 years  olson  clean up tutorial code
GettingStarted.html  1.3  15 years  overbeek  add some comments to assignment1
subsystem_tutorial.html  1.3  15 years  overbeek  fix bug in copying a subsystem
energy.jpg  1.1  10 years  overbeek  an update to my abstract tutorial
why_use_the_SEED.html  1.1  14 years  overbeek  add a tutorial on finding relevant links
SEED_administration_issues.html  1.18  13 years  overbeek  minor fix to SEED admin document
tut_abs.html  1.6  10 years  overbeek  an update to my abstract tutorial
HOPSS_type.html  1.1  14 years  overbeek  the HOPSS stuff for the prototype web site
AA2.jpg  1.1  10 years  overbeek  an update to my abstract tutorial
bioinf_first_classes.html  1.4  14 years  overbeek  course description
cycle_files_image.gif  1.1  11 years  overbeek  updating figure of cycle in tutorial
code_to_invoke_compare_regions.html  1.1  13 years  overbeek  how to compare regions
subsystem_tutorial2.html  1.6  14 years  overbeek  minor fix to subsystem tutorial
phylogeny.html  1.1  14 years  overbeek  add the phylogeny notes
expression.jpg  1.1  10 years  overbeek  an update to my abstract tutorial
bioinf_first_class_part2.html  1.2  14 years  overbeek  additions to class writeups
1KG_update.html  1.4  12 years  overbeek  fixes to the 1K update
UsingSigs.html  1.2  14 years  overbeek  update of tutorial
tyra_example.html  1.1  13 years  overbeek  add TyrA example to tutorials
AA3.jpg  1.1  10 years  overbeek  an update to my abstract tutorial
bioinf_first_class.html  1.1  14 years  overbeek  update notes in bio class
GenomeLog.html  1.1  13 years  overbeek  add documentation on the Genome Log
annotation_clearinghouse.html  1.4  12 years  overbeek  update the to ACH writeup
cycle_files_image003.png  1.1  11 years  overbeek  add note on anotation cycle
DataMining.html  1.5  13 years  overbeek  fix Data mining tutorial
How_to_annotate_a_genome.html  1.1  11 years  overbeek  add description of anotating a genome
exchange_of_assignments_and_annotations_Sept17_2004.html  1.2  15 years  overbeek  minor typos in exchange of annotations writeup
replication.jpg  1.1  10 years  overbeek  an update to my abstract tutorial
tutorials.html  1.33  10 years  overbeek  took out point to HOPS
assignment1.html  1.2  15 years  overbeek  fix bug in copying a subsystem
AA1.jpg  1.1  10 years  overbeek  an update to my abstract tutorial
scan_for_matches.html  1.1  14 years  overbeek  Add sequence search help.
splitting_roles.html  1.1  13 years  overbeek  add little writeup on splitting functional roles
compare_regions.html  1.3  14 years  overbeek  update compare_regions.html
subsystems_notion.html  1.1  12 years  overbeek  add the writeup on the notion of subsystem
abstract_coupling.html  1.1  13 years  overbeek  clean up help for abstract functional coupling
sequence_search.html  1.1  14 years  overbeek  Add sequence search help.
TheCycle.html  1.2  11 years  overbeek  updating figure of cycle in tutorial
evidence_codes.html  1.7  12 years  parrello  Fixed a spelling error: "disambuating" to "disambiguating".

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