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File Rev. Age Author Last log entry
 Parent Directory        
DataMining.examples/        
RAST_Supplement/        
add_link.py  1.1  15 years  disz  Python version of tutorial code
gf2maps_and_subs.py  1.1  15 years  disz  New tutorial code in python
annotations_of.py  1.1  15 years  disz  Python version of tutorial code
genomes.ex.py  1.1  15 years  disz  Python version of tutorial code
foo.py  1.1  15 years  disz  Python version of tutorial code
seq_utils.py  1.1  15 years  disz  Python version of tutorial code
features_around.py  1.1  15 years  disz  Python version of tutorial code
show_similarities.py  1.1  15 years  disz  Python version of tutorial code
connect_subsystem_to_genes_the_right_way.py  1.1  15 years  disz  more python tutorial code
show_functional_coupling.py  1.1  15 years  disz  Python version of tutorial code
connect_map_to_genes.py  1.1  15 years  disz  Python version of tutorial code
list_complete_eukaryotic_genomes.py  1.1  15 years  disz  Python version of tutorial code
contigs_for_genome.py  1.1  15 years  disz  Python version of tutorial code
connect_subsystem_to_genes.py  1.1  15 years  disz  Python version of tutorial code
MetabolicReconstructions.html  1.2  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
scan_for_matches_README.html  1.2  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
SEED_functions.html  1.3  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
1KG.html  1.5  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
about_HOPSS.html  1.3  13 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
connect_subsystem_to_genes_the_right_way.pl  1.1  15 years  olson  new one
gf2maps_and_subs.pl  1.2  15 years  olson  clean up tutorial code
show_similarities.pl  1.2  15 years  olson  clean up tutorial code
contigs_for_genome.pl  1.2  15 years  olson  Remove tool_hdr-generated stuff. Remove ^M's.
connect_subsystem_to_genes.pl  1.2  15 years  olson  clean up tutorial code
features_around.pl  1.2  15 years  olson  Remove tool_hdr-generated stuff. Remove ^M's.
connect_map_to_genes.pl  1.2  15 years  olson  clean up tutorial code
seq_utils.pl  1.3  15 years  olson  clean up tutorial code
add_link.pl  1.2  15 years  olson  Remove tool_hdr-generated stuff. Remove ^M's.
list_complete_eukaryotic_genomes.pl  1.2  15 years  olson  clean up tutorial code
Makefile  1.7  11 years  olson  install all the other webpagy kind of things.
batch_assignments.pl  1.2  15 years  olson  clean up tutorial code
genomes.ex.pl  1.2  15 years  olson  Remove tool_hdr-generated stuff. Remove ^M's.
get_subsystem_cell.pl  1.2  15 years  olson  clean up tutorial code
annotations_of.pl  1.2  15 years  olson  clean up tutorial code
show_functional_coupling.pl  1.2  15 years  olson  clean up tutorial code
GettingStarted.html  1.3  15 years  overbeek  add some comments to assignment1
subsystem_tutorial.html  1.3  15 years  overbeek  fix bug in copying a subsystem
why_use_the_SEED.html  1.1  14 years  overbeek  add a tutorial on finding relevant links
SEED_administration_issues.html  1.18  13 years  overbeek  minor fix to SEED admin document
tut_abs.html  1.5  11 years  overbeek  additions to my notes on the abstract tutorial
HOPSS_type.html  1.1  14 years  overbeek  the HOPSS stuff for the prototype web site
bioinf_first_classes.html  1.4  14 years  overbeek  course description
cycle_files_image.gif  1.1  11 years  overbeek  updating figure of cycle in tutorial
code_to_invoke_compare_regions.html  1.1  13 years  overbeek  how to compare regions
subsystem_tutorial2.html  1.6  14 years  overbeek  minor fix to subsystem tutorial
phylogeny.html  1.1  14 years  overbeek  add the phylogeny notes
bioinf_first_class_part2.html  1.2  14 years  overbeek  additions to class writeups
1KG_update.html  1.4  12 years  overbeek  fixes to the 1K update
UsingSigs.html  1.2  14 years  overbeek  update of tutorial
tyra_example.html  1.1  13 years  overbeek  add TyrA example to tutorials
bioinf_first_class.html  1.1  14 years  overbeek  update notes in bio class
GenomeLog.html  1.1  13 years  overbeek  add documentation on the Genome Log
annotation_clearinghouse.html  1.4  12 years  overbeek  update the to ACH writeup
cycle_files_image003.png  1.1  11 years  overbeek  add note on anotation cycle
DataMining.html  1.5  13 years  overbeek  fix Data mining tutorial
How_to_annotate_a_genome.html  1.1  11 years  overbeek  add description of anotating a genome
exchange_of_assignments_and_annotations_Sept17_2004.html  1.2  15 years  overbeek  minor typos in exchange of annotations writeup
tutorials.html  1.32  11 years  overbeek  new annotation clearinghouse decsription
assignment1.html  1.2  15 years  overbeek  fix bug in copying a subsystem
scan_for_matches.html  1.1  14 years  overbeek  Add sequence search help.
splitting_roles.html  1.1  13 years  overbeek  add little writeup on splitting functional roles
compare_regions.html  1.3  14 years  overbeek  update compare_regions.html
subsystems_notion.html  1.1  12 years  overbeek  add the writeup on the notion of subsystem
abstract_coupling.html  1.1  13 years  overbeek  clean up help for abstract functional coupling
sequence_search.html  1.1  14 years  overbeek  Add sequence search help.
TheCycle.html  1.2  11 years  overbeek  updating figure of cycle in tutorial
evidence_codes.html  1.7  13 years  parrello  Fixed a spelling error: "disambuating" to "disambiguating".
API.html  1.3  14 years  redwards  correcting API.html

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