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Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Feb 22 20:31:10 2011 UTC (8 years, 8 months ago) by overbeek
Branch: MAIN
CVS Tags: HEAD, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, myrast_rel40, rast_rel_2011_0928, rast_rel_2014_0729, rast_rel_2014_0912
Changes since 1.4: +91 -229 lines
Diff to previous 1.4
fix OTU update to use gary olsen sequence grouping script

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jul 21 16:51:16 2010 UTC (9 years, 3 months ago) by olson
Branch: MAIN
CVS Tags: mgrast_dev_02212011, mgrast_dev_02222011, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119
Changes since 1.3: +5 -2 lines
Diff to previous 1.3
Fix cp bug when verbose not set; close generated fasta and run formatdb when finished.

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Mar 29 19:50:16 2010 UTC (9 years, 7 months ago) by gdpusch
Branch: MAIN
CVS Tags: rast_rel_2010_0526
Changes since 1.2: +1 -1 lines
Diff to previous 1.2
Fixed pattern to recognize several variations on "16S ribosomal RNA."

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Mar 26 20:24:28 2010 UTC (9 years, 7 months ago) by overbeek
Branch: MAIN
Changes since 1.1: +2 -3 lines
Diff to previous 1.1
leave order of memebers in old OTU the same

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Dec 2 21:20:15 2009 UTC (9 years, 11 months ago) by gdpusch
Branch: MAIN
CVS Tags: rast_rel_2010_0118
Initial checkin of script to add new genomes to OTUs, and remove deleted genomes.

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