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1 : olson 1.5 #
2 :     # Copyright (c) 2003-2006 University of Chicago and Fellowship
3 :     # for Interpretations of Genomes. All Rights Reserved.
4 :     #
5 :     # This file is part of the SEED Toolkit.
6 :     #
7 :     # The SEED Toolkit is free software. You can redistribute
8 :     # it and/or modify it under the terms of the SEED Toolkit
9 :     # Public License.
10 :     #
11 :     # You should have received a copy of the SEED Toolkit Public License
12 :     # along with this program; if not write to the University of Chicago
13 :     # at info@ci.uchicago.edu or the Fellowship for Interpretation of
14 :     # Genomes at veronika@thefig.info or download a copy from
15 :     # http://www.theseed.org/LICENSE.TXT.
16 :     #
17 :    
18 : overbeek 1.1 use FIG;
19 :    
20 : overbeek 1.4 $usage = "usage: sync_new_system Dir MakeAssignments";
21 : overbeek 1.1 (
22 : overbeek 1.3 ($dir = shift @ARGV) && (-d $dir)
23 : overbeek 1.1 )
24 :     || die $usage;
25 :    
26 : overbeek 1.4 my $make_assignments = (@ARGV > 0) ? $ARGV[0] : "";
27 :    
28 : overbeek 1.3 my $assignments_package = "$dir/assignments_package";
29 :     my $annotations_package = "$dir/annotations_package";
30 :     my $trans_rules_package = "$dir/trans_rules_package";
31 :     my $subsys_package = "$dir/subsys_package";
32 :    
33 : overbeek 1.4 &FIG::run("$FIG_Config::bin/install_assignments $assignments_package $make_assignments");
34 : overbeek 1.1 &FIG::run("$FIG_Config::bin/install_annotations $annotations_package");
35 : overbeek 1.2 &FIG::run("$FIG_Config::bin/install_translation_rules update $trans_rules_package");
36 : overbeek 1.1 &FIG::run("$FIG_Config::bin/install_subsystems $subsys_package");
37 :    

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