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revision 1.3, Sun Dec 21 21:45:05 2014 UTC revision 1.4, Mon Dec 22 15:06:01 2014 UTC
# Line 48  Line 48 
48  =item -d  =item -d
49    
50  This is used to print only lines in which the original and translated  This is used to print only lines in which the original and translated
51  functions differ  functions differ.
52    
53  =back  =back
54    
# Line 81  Line 81 
81      for my $tuple (@tuples) {      for my $tuple (@tuples) {
82          my ($function, $line) = @$tuple;          my ($function, $line) = @$tuple;
83          my $updated_function = &update_function($function,$to);          my $updated_function = &update_function($function,$to);
84          if ((! $just_diffs) || ($function ne $updated_function))          my $f1 = $function;
85            $f1 =~ s/\s*\#.*$//;
86            if ((! $just_diffs) || ($f1 ne $updated_function))
87          {          {
88              print "$line\t$updated_function\n";              print "$line\t$updated_function\n";
89          }          }
# Line 242  Line 244 
244  14-3-3-like protein  14-3-3-like protein
245  putative 14-3-3-like protein  putative 14-3-3-like protein
246    
247  16S rRNA m(2)G 1207 methyltransferase (EC 2.1.1.52)  16S rRNA m(2)G 1207 methyltransferase
248  16S rRNA m(2)G 1207 methyltransferase (EC 2.1.1.52)  16S rRNA m(2)G 1207 methyltransferase (EC 2.1.1.52)
249  16S rRNA m(2)G 1207 methyltransferase( EC:2.1.1.52 )  16S rRNA m(2)G 1207 methyltransferase( EC:2.1.1.52 )
250    
# Line 418  Line 420 
420  2,6-dihydropseudooxynicotine hydrolase (EC 3.7.1.-)  2,6-dihydropseudooxynicotine hydrolase (EC 3.7.1.-)
421  2,6-dihydropseudooxynicotine hydrolase  2,6-dihydropseudooxynicotine hydrolase
422    
423  2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)  2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
424  2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)  2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)
425  2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase( EC:2.7.8.25 )  2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase( EC:2.7.8.25 )
426    
# Line 4342  Line 4344 
4344  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal( EC:1.3.99.2 )  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal( EC:1.3.99.2 )
4345  acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal  acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal
4346    
4347  Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.99.13)  Acyl-CoA dehydrogenase, long-chain specific
4348  Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.99.13)  Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.99.13)
4349  acyl-CoA dehydrogenase, long-chain specific( EC:1.3.99.13 )  acyl-CoA dehydrogenase, long-chain specific( EC:1.3.99.13 )
4350  Acyl-CoA dehydrogenase, long-chain specific( EC:1.3.99.13 )  Acyl-CoA dehydrogenase, long-chain specific( EC:1.3.99.13 )
# Line 8727  Line 8729 
8729  ArsC family protein  ArsC family protein
8730  arsC family protein  arsC family protein
8731    
8732  Arsenate reductase (azurin) (EC 1.20.98.1)  Arsenate reductase (azurin)
8733  Arsenate reductase (Azurin) (EC 1.20.98.1)  Arsenate reductase (Azurin) (EC 1.20.98.1)
8734  Arsenate reductase (azurin)( EC:1.20.98.1 )  Arsenate reductase (azurin)( EC:1.20.98.1 )
8735    
# Line 13825  Line 13827 
13827  carnitinyl-CoA dehydratase  carnitinyl-CoA dehydratase
13828  putative carnitinyl-CoA dehydratase (EC 4.2.1.-)  putative carnitinyl-CoA dehydratase (EC 4.2.1.-)
13829    
13830  Carotene 7,8-desaturase (EC 1.14.99.30)  Carotene 7,8-desaturase
13831  carotene 7,8-desaturase  carotene 7,8-desaturase
13832  carotene 7,8-desaturase( EC:1.14.99.30 )  carotene 7,8-desaturase( EC:1.14.99.30 )
13833  Carotene 7,8-desaturase( EC:1.14.99.30 )  Carotene 7,8-desaturase( EC:1.14.99.30 )
# Line 22519  Line 22521 
22521  dihydroorotate dehydrogenase family protein( EC:1.3.1.2 )  dihydroorotate dehydrogenase family protein( EC:1.3.1.2 )
22522  putative dihydroorotate dehydrogenase family protein  putative dihydroorotate dehydrogenase family protein
22523    
22524  Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)  Dihydroorotate dehydrogenase, catalytic subunit
22525  dihydroorotate dehydrogenase, catalytic subunit( EC:1.3.3.1 )  dihydroorotate dehydrogenase, catalytic subunit( EC:1.3.3.1 )
22526  putative dihydroorotate dehydrogenase, catalytic subunit  putative dihydroorotate dehydrogenase, catalytic subunit
22527    
# Line 29176  Line 29178 
29178  flavoprotein NADH-dependent oxidoreductase  flavoprotein NADH-dependent oxidoreductase
29179  flavoprotein NADH-dependent oxidoreductase( EC:1.- )  flavoprotein NADH-dependent oxidoreductase( EC:1.- )
29180    
29181  Flavoprotein oxidoreductase (EC 1.14.13.3)  Flavoprotein oxidoreductase
29182  flavoprotein oxidoreductase  flavoprotein oxidoreductase
29183  putative flavoprotein oxidoreductase  putative flavoprotein oxidoreductase
29184  Flavoprotein oxidoreductase( EC:1.14.13.3 )  Flavoprotein oxidoreductase( EC:1.14.13.3 )
# Line 37747  Line 37749 
37749  putative Hydroxylacyl-CoA dehydrogenase  putative Hydroxylacyl-CoA dehydrogenase
37750  putative hydroxylacyl-CoA dehydrogenase  putative hydroxylacyl-CoA dehydrogenase
37751    
37752  Hydroxylamine oxidase (EC 1.7.3.4)  Hydroxylamine oxidase
37753  hydroxylamine oxidase  hydroxylamine oxidase
37754  Hydroxylamine oxidase( EC:1.7.3.4 )  Hydroxylamine oxidase( EC:1.7.3.4 )
37755    
# Line 44715  Line 44717 
44717  putative malate:quinone oxidoreductase  putative malate:quinone oxidoreductase
44718  putative malate:quinone oxidoreductase( EC:1.1.99.16 )  putative malate:quinone oxidoreductase( EC:1.1.99.16 )
44719    
44720  Malate:quinone-oxidoreductase (EC 1.1.99.16)  Malate:quinone-oxidoreductase
44721  malate:quinone-oxidoreductase  malate:quinone-oxidoreductase
44722  malate:quinone-oxidoreductase( EC:1.1.99.16 )  malate:quinone-oxidoreductase( EC:1.1.99.16 )
44723  Malate:quinone-oxidoreductase( EC:1.1.99.16 )  Malate:quinone-oxidoreductase( EC:1.1.99.16 )
# Line 51728  Line 51730 
51730  Nitric oxide reductase activation protein NorQ  Nitric oxide reductase activation protein NorQ
51731  nitric oxide reductase activation protein NorQ  nitric oxide reductase activation protein NorQ
51732    
51733  nitric oxide reductase NorQ protein (EC 1.7.99.7)  nitric oxide reductase NorQ protein
51734  Nitric oxide reductase NorQ protein (EC 1.7.99.7)  Nitric oxide reductase NorQ protein (EC 1.7.99.7)
51735  nitric oxide reductase NorQ protein( EC:1.7.99.7 )  nitric oxide reductase NorQ protein( EC:1.7.99.7 )
51736    
51737  Nitric oxide synthase  Nitric oxide synthase
51738  nitric oxide synthase  nitric oxide synthase
51739    
51740  Nitric-oxide reductase subunit B (EC 1.7.99.7)  Nitric-oxide reductase subunit B
51741  nitric-oxide reductase subunit B  nitric-oxide reductase subunit B
51742    
51743  Nitric-oxide reductase subunit C (EC 1.7.99.7)  Nitric-oxide reductase subunit C
51744  nitric-oxide reductase subunit C  nitric-oxide reductase subunit C
51745  nitric-oxide reductase subunit C( EC:1.7.99.7 )  nitric-oxide reductase subunit C( EC:1.7.99.7 )
51746    
# Line 60539  Line 60541 
60541  phosphoglycerate mutase 2  phosphoglycerate mutase 2
60542  phosphoglycerate mutase 2( EC:5.4.2.1 )  phosphoglycerate mutase 2( EC:5.4.2.1 )
60543    
60544  phosphoglycerate mutase 2 protein (EC 5.4.2.1)  phosphoglycerate mutase 2 protein
60545  PUTATIVE PHOSPHOGLYCERATE MUTASE 2 PROTEIN( EC:5.4.2.1 )  PUTATIVE PHOSPHOGLYCERATE MUTASE 2 PROTEIN( EC:5.4.2.1 )
60546  Putative phosphoglycerate mutase 2 protein( EC:5.4.2.1 )  Putative phosphoglycerate mutase 2 protein( EC:5.4.2.1 )
60547  putative phosphoglycerate mutase 2 protein  putative phosphoglycerate mutase 2 protein
60548  phosphoglycerate mutase 2 protein( EC:5.4.2.1 )  phosphoglycerate mutase 2 protein( EC:5.4.2.1 )
60549    
60550  phosphoglycerate mutase (putative) (EC 5.4.2.1)  phosphoglycerate mutase (putative)
60551  Phosphoglycerate mutase (Putative) (EC 5.4.2.1)  Phosphoglycerate mutase (Putative) (EC 5.4.2.1)
60552  phosphoglycerate mutase (putative)( EC:5.4.2.1 )  phosphoglycerate mutase (putative)( EC:5.4.2.1 )
60553    
# Line 60560  Line 60562 
60562  phosphoglycerate mutase family protein( EC:5.4.2.1 )  phosphoglycerate mutase family protein( EC:5.4.2.1 )
60563  putative phosphoglycerate mutase family protein  putative phosphoglycerate mutase family protein
60564    
60565  Phosphoglycerate mutase family protein, putative (EC 5.4.2.1)  Phosphoglycerate mutase family protein, putative
60566  phosphoglycerate mutase family protein, putative  phosphoglycerate mutase family protein, putative
60567  Phosphoglycerate mutase family protein, putative( EC:5.4.2.1 )  Phosphoglycerate mutase family protein, putative( EC:5.4.2.1 )
60568    
# Line 62214  Line 62216 
62216  Plastocyanin-like protein  Plastocyanin-like protein
62217  plastocyanin-like protein  plastocyanin-like protein
62218    
62219  Plastoquinol--plastocyanin reductase (EC 1.10.99.1)  Plastoquinol--plastocyanin reductase
62220  plastoquinol--plastocyanin reductase  plastoquinol--plastocyanin reductase
62221  plastoquinol--plastocyanin reductase( EC:1.10.99.1 )  plastoquinol--plastocyanin reductase( EC:1.10.99.1 )
62222  Plastoquinol--plastocyanin reductase( EC:1.10.99.1 )  Plastoquinol--plastocyanin reductase( EC:1.10.99.1 )
# Line 64832  Line 64834 
64834  Precorrin-6y C5,15-methyltransferase, subunit CbiE  Precorrin-6y C5,15-methyltransferase, subunit CbiE
64835  Precorrin-6y C5,15-methyltransferase, subunit CbiE( EC:2.1.1.132 )  Precorrin-6y C5,15-methyltransferase, subunit CbiE( EC:2.1.1.132 )
64836    
64837  Precorrin-8X methylmutase (EC 5.4.1.2)  Precorrin-8X methylmutase
64838  precorrin-8X methylmutase( EC:1.7.7.1,EC:5.4.1.2 )  precorrin-8X methylmutase( EC:1.7.7.1,EC:5.4.1.2 )
64839  precorrin-8X methylmutase( EC:5.4.1.2 )  precorrin-8X methylmutase( EC:5.4.1.2 )
64840  Precorrin-8X methylmutase( EC:5.4.1.2 )  Precorrin-8X methylmutase( EC:5.4.1.2 )
# Line 68073  Line 68075 
68075  probable phosphoglycerate mutase  probable phosphoglycerate mutase
68076  probable phosphoglycerate mutase( EC:5.4.2.1 )  probable phosphoglycerate mutase( EC:5.4.2.1 )
68077    
68078  Probable phosphoglycerate mutase 2 (EC 5.4.2.1)  Probable phosphoglycerate mutase 2
68079  probable phosphoglycerate mutase 2( EC:5.4.2.1 )  probable phosphoglycerate mutase 2( EC:5.4.2.1 )
68080  Probable phosphoglycerate mutase 2( EC:5.4.2.1 )  Probable phosphoglycerate mutase 2( EC:5.4.2.1 )
68081    
# Line 73642  Line 73644 
73644  pyruvate dehydrogenase (acetyl-transferring)  pyruvate dehydrogenase (acetyl-transferring)
73645  Pyruvate dehydrogenase (acetyl-transferring)( EC:1.2.4.1 )  Pyruvate dehydrogenase (acetyl-transferring)( EC:1.2.4.1 )
73646    
73647  pyruvate dehydrogenase (cytochrome) (EC 1.2.2.2)  pyruvate dehydrogenase (cytochrome)
73648  pyruvate dehydrogenase [cytochrome]  pyruvate dehydrogenase [cytochrome]
73649  pyruvate dehydrogenase (cytochrome)( EC:1.2.2.2 )  pyruvate dehydrogenase (cytochrome)( EC:1.2.2.2 )
73650    

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