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Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Feb 22 22:11:21 2017 UTC (2 years, 8 months ago) by gdpusch
Branch: MAIN
Changes since 1.3: +80 -17 lines
Diff to previous 1.3
Extract RNAs as well as PEGs.

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 28 21:21:21 2016 UTC (3 years, 1 month ago) by gdpusch
Branch: MAIN
Changes since 1.2: +68 -4 lines
Diff to previous 1.2
Added support for RNA and pseudogene features. (The RNA function standardization probably needs some more work. :-(

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 24 15:54:16 2015 UTC (3 years, 10 months ago) by gdpusch
Branch: MAIN
Changes since 1.1: +3 -7 lines
Diff to previous 1.1
Add test to flip to "metagenome" mode for genomes smaller than 25 kbp, so that PRODIGAL will not bail out.FigKernelPackages/Prodigal.pm

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Feb 7 17:13:11 2011 UTC (8 years, 9 months ago) by gdpusch
Branch: MAIN
CVS Tags: mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, myrast_rel40, rast_rel_2011_0928, rast_rel_2014_0729, rast_rel_2014_0912
SVR GenBank parser using Gary\'s code

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