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Revision 1.5 - (download) (as text) (annotate)
Wed Nov 12 18:29:31 2008 UTC (11 years ago) by dejongh
Branch: MAIN
CVS Tags: mgrast_dev_08112011, rast_rel_2009_05_18, mgrast_dev_08022011, rast_rel_2014_0912, myrast_rel40, mgrast_dev_05262011, rast_rel_2008_12_18, mgrast_dev_04082011, rast_rel_2010_0928, mgrast_version_3_2, mgrast_dev_12152011, mgrast_dev_06072011, rast_rel_2009_0925, rast_rel_2010_0526, rast_rel_2014_0729, mgrast_dev_02212011, rast_rel_2010_1206, mgrast_release_3_0, mgrast_dev_03252011, rast_rel_2010_0118, rast_rel_2009_02_05, rast_rel_2011_0119, mgrast_release_3_0_4, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_1, mgrast_dev_03312011, mgrast_release_3_1_2, mgrast_release_3_1_1, mgrast_release_3_1_0, mgrast_dev_04132011, mgrast_dev_04012011, rast_rel_2009_07_09, rast_rel_2010_0827, myrast_33, rast_rel_2011_0928, mgrast_dev_04052011, mgrast_dev_02222011, rast_rel_2009_03_26, mgrast_dev_10262011, rast_rel_2008_11_24, HEAD
Changes since 1.4: +1 -2 lines
switch to scenario_directory

use strict;
use model;
use FIGV;

my $orgdir;
while ((@ARGV > 0) && ($ARGV[0] =~ /^-/))
{
    my $arg = shift @ARGV;
    if ($arg =~ /^-orgdir/)
    {
	$orgdir = shift @ARGV;
    }
    else
    {
	die "Unknown option $arg\n";
    }
}

my ($genome_id) = @ARGV;

if (scalar @ARGV > 1)
{
    print "usage:  run_scenarios [genome-id]";
    exit -1;
}

if ($genome_id eq "")
{
    $genome_id = "All";
}

if ($orgdir)
{
    my $fig = new FIGV($orgdir);
    model::set_fig($fig);
}

model::run_supersets($genome_id,0);

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