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revision 1.12, Tue Apr 14 18:19:17 2009 UTC revision 1.13, Thu Nov 12 14:26:20 2009 UTC
# Line 332  Line 332 
332      || die "Could not write-open $tmp_upstream";      || die "Could not write-open $tmp_upstream";
333    
334  my %start_counts;    #...Hash to hold START codon counts  my %start_counts;    #...Hash to hold START codon counts
335    $start_counts{0}   = 0;
336    $start_counts{atg} = 0;
337    $start_counts{gtg} = 0;
338    $start_counts{ttg} = 0;
339    
340  $contig_id = qq();  $contig_id = qq();
341  while(defined($entry = <PREDICT>)) {  while(defined($entry = <PREDICT>)) {

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