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revision 1.1, Mon Apr 20 19:19:39 2015 UTC revision 1.2, Mon Apr 20 19:22:43 2015 UTC
# Line 4  Line 4 
4  use Getopt::Long;  use Getopt::Long;
5  use SeedEnv;  use SeedEnv;
6    
7  my $usage = 'reps_for_wc1.pl -n [number of genomes] -l list of PSEED IDs > List of Rep IDs  my $usage = 'reps_for_wc.pl -n [number of genomes] -l list of PSEED IDs -o output_prefix > List of Rep IDs
8              -l list of  PSEED ids, 1 per line              -l list of  PSEED ids, 1 per line
9              -n number of reps you want              -n number of reps you want
10              -o output prefix for alignment and tree files              -o output prefix for alignment and tree files

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