Log of /FigKernelScripts/promote_orfs_to_pegs.pl

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Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Feb 13 14:54:27 2008 UTC (11 years, 10 months ago) by gdpusch
Branch: MAIN
CVS Tags: mgrast_rel_2008_0625, mgrast_rel_2008_0806, mgrast_rel_2008_0917, mgrast_rel_2008_0919, mgrast_rel_2008_0923, mgrast_rel_2008_0924, mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, rast_2008_0924, rast_rel_2008_04_23, rast_rel_2008_06_16, rast_rel_2008_06_18, rast_rel_2008_07_21, rast_rel_2008_08_07, rast_rel_2008_09_29, rast_rel_2008_09_30, rast_rel_2008_10_09, rast_rel_2008_10_29, rast_rel_2008_11_24, rast_rel_2008_12_18, rast_rel_2009_02_05, rast_rel_2009_03_26, rast_rel_2009_05_18, rast_rel_2009_07_09, rast_rel_2009_0925, rast_rel_2010_0118, rast_rel_2010_0526, rast_release_2008_09_29
Changes since 1.12: +29 -9 lines
Diff to previous 1.12

Final clean-up. -- /gdp

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Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 6 00:07:06 2007 UTC (12 years ago) by gdpusch
Branch: MAIN
Changes since 1.11: +64 -54 lines
Diff to previous 1.11

Added bulletproofing against empty "neighbors" file. -- /gdp

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Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Oct 10 20:24:21 2007 UTC (12 years, 2 months ago) by gdpusch
Branch: MAIN
Changes since 1.10: +4 -6 lines
Diff to previous 1.10

Minor revision to comments. -- /gdp

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Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Sep 13 19:55:02 2007 UTC (12 years, 3 months ago) by olson
Branch: MAIN
Changes since 1.9: +4 -0 lines
Diff to previous 1.9

add comment

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Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jun 8 18:11:21 2007 UTC (12 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.8: +5 -6 lines
Diff to previous 1.8

add use strict, fix crash resulting from badly scoped var.

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Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jun 7 19:01:48 2007 UTC (12 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.7: +24 -18 lines
Diff to previous 1.7

disable auto_assign at this stage

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Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Thu May 17 12:44:39 2007 UTC (12 years, 7 months ago) by gdpusch
Branch: MAIN
Changes since 1.6: +4 -6 lines
Diff to previous 1.6

Attempt to prevent failure during clean-up from NFS leavings. -- /gdp

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Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Nov 14 17:35:44 2006 UTC (13 years, 1 month ago) by olson
Branch: MAIN
Changes since 1.5: +10 -1 lines
Diff to previous 1.5

Changes for rapid propagation on the cluster.

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Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Oct 28 14:27:05 2006 UTC (13 years, 1 month ago) by overbeek
Branch: MAIN
Changes since 1.4: +91 -2 lines
Diff to previous 1.4

Added code to BLAST ORFs before promoting them, and to run `auto_assign` on the result. -- /gdp

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Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Oct 5 00:28:58 2006 UTC (13 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.3: +1 -1 lines
Diff to previous 1.3

fixes to rapid prop technology and added diffsF.cgi

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Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Sep 15 11:25:42 2006 UTC (13 years, 3 months ago) by overbeek
Branch: MAIN
Changes since 1.2: +2 -0 lines
Diff to previous 1.2

fix yet another bug in all_bbhs - this one relating to deleted_fids

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Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 13 03:27:45 2006 UTC (13 years, 3 months ago) by overbeek
Branch: MAIN
Changes since 1.1: +8 -1 lines
Diff to previous 1.1

Added some clean-up logic. -- /gdp

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Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Sep 4 22:24:32 2006 UTC (13 years, 3 months ago) by overbeek
Branch: MAIN

add promote_orfs_to_pegs