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Revision 1.6 - (download) (as text) (annotate)
Sun Jul 31 01:09:59 2005 UTC (14 years, 4 months ago) by overbeek
Branch: MAIN
CVS Tags: caBIG-dataload-0, caBIG-00-00-00
Changes since 1.5: +1 -0 lines
 fixes to pick_gene_boundaries

# -*- perl -*-

use FIG;
my $fig = new FIG;

$usage = "usage: predict_starts Objects ClearCalls ProposedCorrections";

(
 ($objects       = shift @ARGV) &&
 ($clear_calls   = shift @ARGV) &&
 ($proposed      = shift @ARGV)
)
    || die $usage;

&FIG::run("make_calls_for_start_predictions < $objects > $FIG_Config::temp/with.calls.$$"); 
&FIG::run("order_corrections_for_start_predictions < $FIG_Config::temp/with.calls.$$ 2> $FIG_Config::temp/clear$$ > $FIG_Config::temp/proposed$$");
system "cat $FIG_Config::temp/clear$$ >> $clear_calls";
system "cat $FIG_Config::temp/proposed$$ >> $proposed";
system "cat $FIG_Config::temp/with.calls.$$";
unlink("$FIG_Config::temp/with.calls.$$","$FIG_Config::temp/clear$$","$FIG_Config::temp/proposed$$");



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