[Bio] / FigKernelScripts / make_protein_weights_and_rates.pl Repository:
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revision 1.1, Sat Jan 13 03:49:35 2007 UTC revision 1.2, Mon Jan 29 18:14:50 2007 UTC
# Line 15  Line 15 
15  my $treeP = &gjonewicklib::read_newick_tree($tree);  my $treeP = &gjonewicklib::read_newick_tree($tree);
16    
17  my($cats,$weights) = proml::estimate_protein_site_rates(\@align,$treeP);  my($cats,$weights) = proml::estimate_protein_site_rates(\@align,$treeP);
18  print "$cats->[0]\n",  print scalar @{$cats->[0]}, "\n",
19      join(" ",@{$cats->[1]}),"\n",        join( " ", @{$cats->[0]} ), "\n",
20      $cats->[2],"\n",        $cats->[1], "\n",
21      "$weights\n";      "$weights\n";

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