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1 : overbeek 1.1 # -*- perl -*-
2 :     #
3 :     # Copyright (c) 2003-2006 University of Chicago and Fellowship
4 :     # for Interpretations of Genomes. All Rights Reserved.
5 :     #
6 :     # This file is part of the SEED Toolkit.
7 :     #
8 :     # The SEED Toolkit is free software. You can redistribute
9 :     # it and/or modify it under the terms of the SEED Toolkit
10 :     # Public License.
11 :     #
12 :     # You should have received a copy of the SEED Toolkit Public License
13 :     # along with this program; if not write to the University of Chicago
14 :     # at info@ci.uchicago.edu or the Fellowship for Interpretation of
15 :     # Genomes at veronika@thefig.info or download a copy from
16 :     # http://www.theseed.org/LICENSE.TXT.
17 :     #
18 :    
19 :     use FIG;
20 :     use File::Path;
21 :    
22 :     $0 =~ m/([^\/]+)$/o;
23 :     $usage = "$1 Workspace_Directory";
24 :     (($workdir = shift) && (!-d $workdir))
25 :     || die "Working directory $workdir already exists\n usage: $usage\n\n";
26 :    
27 : olson 1.2 &FIG::run("FigKernelScripts/make_ncbi_files $workdir $workdir/NR");
28 :     &FIG::run("FigKernelScripts/make_sp_uni_files $workdir $workdir/NR");
29 :     &FIG::run("FigKernelScripts/make_kegg_files $workdir $workdir/NR");

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