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Revision 1.22 - (download) (as text) (annotate)
Mon Dec 5 18:56:37 2005 UTC (13 years, 11 months ago) by olson
Branch: MAIN
CVS Tags: mgrast_dev_08112011, rast_rel_2009_05_18, mgrast_dev_08022011, rast_rel_2014_0912, rast_rel_2008_06_18, myrast_rel40, rast_rel_2008_06_16, mgrast_dev_05262011, rast_rel_2008_12_18, mgrast_dev_04082011, rast_rel_2008_07_21, rast_rel_2010_0928, rast_2008_0924, mgrast_version_3_2, mgrast_dev_12152011, rast_rel_2008_04_23, mgrast_dev_06072011, rast_rel_2008_09_30, rast_rel_2009_0925, rast_rel_2010_0526, rast_rel_2014_0729, mgrast_dev_02212011, rast_rel_2010_1206, caBIG-05Apr06-00, mgrast_release_3_0, mgrast_dev_03252011, rast_rel_2010_0118, mgrast_rel_2008_0924, mgrast_rel_2008_1110_v2, rast_rel_2009_02_05, rast_rel_2011_0119, mgrast_rel_2008_0625, mgrast_release_3_0_4, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_1, mgrast_dev_03312011, mgrast_release_3_1_2, mgrast_release_3_1_1, mgrast_release_3_1_0, mgrast_dev_04132011, rast_rel_2008_10_09, mgrast_dev_04012011, rast_release_2008_09_29, mgrast_rel_2008_0806, mgrast_rel_2008_0923, mgrast_rel_2008_0919, rast_rel_2009_07_09, rast_rel_2010_0827, mgrast_rel_2008_1110, myrast_33, rast_rel_2011_0928, rast_rel_2008_09_29, mgrast_rel_2008_0917, rast_rel_2008_10_29, mgrast_dev_04052011, mgrast_dev_02222011, caBIG-13Feb06-00, rast_rel_2009_03_26, mgrast_dev_10262011, rast_rel_2008_11_24, rast_rel_2008_08_07, HEAD
Changes since 1.21: +17 -0 lines
Add license words.

#
# Copyright (c) 2003-2006 University of Chicago and Fellowship
# for Interpretations of Genomes. All Rights Reserved.
#
# This file is part of the SEED Toolkit.
# 
# The SEED Toolkit is free software. You can redistribute
# it and/or modify it under the terms of the SEED Toolkit
# Public License. 
#
# You should have received a copy of the SEED Toolkit Public License
# along with this program; if not write to the University of Chicago
# at info@ci.uchicago.edu or the Fellowship for Interpretation of
# Genomes at veronika@thefig.info or download a copy from
# http://www.theseed.org/LICENSE.TXT.
#

use FIG;
use P2Pupdate;

my $fig = new FIG;

use strict;

my $usage = "usage: import_subsystems MainUser ImportedFrom < ExportedSubsystems";
my($main_user,$imported_from);

(
 ($main_user     = shift @ARGV) &&
 ($imported_from = shift @ARGV)
)
    || die $usage;

my($subsystems_dir) = "$FIG_Config::data/Subsystems";
&FIG::verify_dir($subsystems_dir);

my $tmp = "$FIG_Config::temp/import_sub.$$";

open(TMP, ">$tmp") or die "Cannot open $tmp for writing: $!";

#
# Directory new assignments are written to.
#

my $assignments_dir = "$FIG_Config::data/Assignments/$main_user";
&FIG::verify_dir($assignments_dir);

while (defined($_ = <STDIN>))
{
    while (defined($_) && ($_ !~ /^\#\#/))
    {
	print TMP $_;
	$_ = <STDIN>;
    }
    close(TMP);

    my $new_assignments = "$assignments_dir/" . &FIG::epoch_to_readable(time) . 
	    ":$imported_from:from_imported_subsystem";

    my $sub = new SubsystemFile(undef, $tmp, $fig);
    $sub->load();
    $sub->install(undef, $imported_from, $new_assignments);
}
exit;
&FIG::run("$FIG_Config::bin/index_subsystems");


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