[Bio] / FigKernelScripts / get_synonyms_from_ach_for_id.pl Repository:
ViewVC logotype

View of /FigKernelScripts/get_synonyms_from_ach_for_id.pl

Parent Directory Parent Directory | Revision Log Revision Log


Revision 1.2 - (download) (as text) (annotate)
Mon Jun 30 19:26:29 2008 UTC (11 years, 7 months ago) by wilke
Branch: MAIN
CVS Tags: mgrast_dev_08112011, rast_rel_2009_05_18, mgrast_dev_08022011, rast_rel_2014_0912, myrast_rel40, mgrast_dev_05262011, rast_rel_2008_12_18, mgrast_dev_04082011, rast_rel_2008_07_21, rast_rel_2010_0928, rast_2008_0924, mgrast_version_3_2, mgrast_dev_12152011, mgrast_dev_06072011, rast_rel_2008_09_30, rast_rel_2009_0925, rast_rel_2010_0526, rast_rel_2014_0729, mgrast_dev_02212011, rast_rel_2010_1206, mgrast_release_3_0, mgrast_dev_03252011, rast_rel_2010_0118, mgrast_rel_2008_0924, mgrast_rel_2008_1110_v2, rast_rel_2009_02_05, rast_rel_2011_0119, mgrast_rel_2008_0625, mgrast_release_3_0_4, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_1, mgrast_dev_03312011, mgrast_release_3_1_2, mgrast_release_3_1_1, mgrast_release_3_1_0, mgrast_dev_04132011, rast_rel_2008_10_09, mgrast_dev_04012011, rast_release_2008_09_29, mgrast_rel_2008_0806, mgrast_rel_2008_0923, mgrast_rel_2008_0919, rast_rel_2009_07_09, rast_rel_2010_0827, mgrast_rel_2008_1110, myrast_33, rast_rel_2011_0928, rast_rel_2008_09_29, mgrast_rel_2008_0917, rast_rel_2008_10_29, mgrast_dev_04052011, mgrast_dev_02222011, rast_rel_2009_03_26, mgrast_dev_10262011, rast_rel_2008_11_24, rast_rel_2008_08_07, HEAD
Changes since 1.1: +2 -4 lines
*** empty log message ***

#!/usr/bin/env /home/bartels/FIGdisk/env/cee/bin/perl

use FIG;
use Getopt::Std;
use strict;
use warnings;

use AnnoClearinghouse;


use vars qw($opt_p);

getopts('p:');


# initialize annotation clearinghouse
my $aclh = AnnoClearinghouse->new( "/vol/clearinghouse/v12" , "/vol/clearinghouse/contrib" , 1);

# set prefix
my $prefix_id = $opt_p || "fig|83333";

 

foreach my $entry ($aclh->get_synonyms_for_prefix($prefix_id) ){
  $entry =~s /:/\t/g;
  print $entry , "\n";
}





exit;









MCS Webmaster
ViewVC Help
Powered by ViewVC 1.0.3