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Revision 1.23 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Nov 11 17:43:21 2010 UTC (9 years ago) by disz
Branch: MAIN
CVS Tags: HEAD, mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, myrast_rel40, rast_rel_2010_1206, rast_rel_2011_0119, rast_rel_2011_0928, rast_rel_2014_0729, rast_rel_2014_0912
Changes since 1.22: +6 -6 lines
Diff to previous 1.22
FigFam 6 digit problem

Revision 1.22 - (view) (download) (as text) (annotate) - [select for diffs]
Thu May 1 02:40:50 2008 UTC (11 years, 6 months ago) by overbeek
Branch: MAIN
CVS Tags: mgrast_rel_2008_0625, mgrast_rel_2008_0806, mgrast_rel_2008_0917, mgrast_rel_2008_0919, mgrast_rel_2008_0923, mgrast_rel_2008_0924, mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, rast_2008_0924, rast_rel_2008_06_16, rast_rel_2008_06_18, rast_rel_2008_07_21, rast_rel_2008_08_07, rast_rel_2008_09_29, rast_rel_2008_09_30, rast_rel_2008_10_09, rast_rel_2008_10_29, rast_rel_2008_11_24, rast_rel_2008_12_18, rast_rel_2009_02_05, rast_rel_2009_03_26, rast_rel_2009_05_18, rast_rel_2009_07_09, rast_rel_2009_0925, rast_rel_2010_0118, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928, rast_release_2008_09_29
Changes since 1.21: +1 -1 lines
Diff to previous 1.21
add connections between FIGfams and structures

Revision 1.21 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 17 20:48:15 2008 UTC (11 years, 7 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2008_04_23
Changes since 1.20: +1 -1 lines
Diff to previous 1.20
Introduct &FIG::get_figfams_data()

Revision 1.20 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Apr 11 14:15:16 2008 UTC (11 years, 7 months ago) by overbeek
Branch: MAIN
Changes since 1.19: +7 -5 lines
Diff to previous 1.19
changes to FIGfams

Revision 1.19 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Mar 1 15:52:45 2008 UTC (11 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.18: +1 -1 lines
Diff to previous 1.18
changes from ::data/FigfamsData to ::FigfamsData

Revision 1.18 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Oct 24 14:25:28 2007 UTC (12 years ago) by overbeek
Branch: MAIN
Changes since 1.17: +9 -0 lines
Diff to previous 1.17
add families_imlementing_role to FigFams.pm

Revision 1.17 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Oct 6 14:45:01 2007 UTC (12 years, 1 month ago) by overbeek
Branch: MAIN
Changes since 1.16: +13 -0 lines
Diff to previous 1.16
updates to computation of VCs

Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Oct 4 00:58:56 2007 UTC (12 years, 1 month ago) by overbeek
Branch: MAIN
Changes since 1.15: +34 -0 lines
Diff to previous 1.15
check figfams fixes

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Mar 18 01:19:06 2007 UTC (12 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.14: +1 -0 lines
Diff to previous 1.14
add help for alignment command in figfam.pl

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Feb 24 03:03:04 2007 UTC (12 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.13: +1 -1 lines
Diff to previous 1.13
try again with the minor fix

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Feb 24 03:00:25 2007 UTC (12 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.12: +2 -2 lines
Diff to previous 1.12
very minor fix to figfam.pl

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Feb 21 16:09:36 2007 UTC (12 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.11: +23 -0 lines
Diff to previous 1.11
Fixes to FigFam.pm

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Feb 18 16:08:18 2007 UTC (12 years, 9 months ago) by overbeek
Branch: MAIN
Changes since 1.10: +1 -1 lines
Diff to previous 1.10
fix error message in figfam.pl

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Dec 31 13:00:10 2006 UTC (12 years, 10 months ago) by overbeek
Branch: MAIN
Changes since 1.9: +11 -0 lines
Diff to previous 1.9
minor fix to check_all_subsystems

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 25 17:14:15 2006 UTC (12 years, 10 months ago) by overbeek
Branch: MAIN
Changes since 1.8: +5 -0 lines
Diff to previous 1.8
changes to support updating FIGfam functions

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jun 21 20:49:21 2006 UTC (13 years, 4 months ago) by overbeek
Branch: MAIN
Changes since 1.7: +1 -1 lines
Diff to previous 1.7
fixes to by_annotator.cgi

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Sun May 7 04:03:10 2006 UTC (13 years, 6 months ago) by overbeek
Branch: MAIN
Changes since 1.6: +13 -3 lines
Diff to previous 1.6
add new_versions_of_features

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Wed May 3 13:18:22 2006 UTC (13 years, 6 months ago) by overbeek
Branch: MAIN
Changes since 1.5: +36 -5 lines
Diff to previous 1.5
 update genome parameters in default assignments

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Apr 3 19:28:52 2006 UTC (13 years, 7 months ago) by overbeek
Branch: MAIN
Changes since 1.4: +5 -0 lines
Diff to previous 1.4
updates to ARPP/STAG

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Apr 1 18:24:23 2006 UTC (13 years, 7 months ago) by overbeek
Branch: MAIN
Changes since 1.3: +51 -12 lines
Diff to previous 1.3
fixes and errors to STAG

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Mar 25 23:12:56 2006 UTC (13 years, 7 months ago) by overbeek
Branch: MAIN
Changes since 1.2: +40 -17 lines
Diff to previous 1.2
add very buggy start of NewGenome.pm and FigFam stuff

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Mar 21 15:53:30 2006 UTC (13 years, 8 months ago) by overbeek
Branch: MAIN
Changes since 1.1: +0 -24 lines
Diff to previous 1.1
fixes to split_and_trim

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Mar 1 20:10:56 2006 UTC (13 years, 8 months ago) by overbeek
Branch: MAIN
add FigFam stuff

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