[Bio] / FigKernelScripts / extract_metagene_contigs.pl Repository:
ViewVC logotype

Log of /FigKernelScripts/extract_metagene_contigs.pl

Parent Directory Parent Directory


Links to HEAD: (view) (download) (as text) (annotate)
Sticky Tag:

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Aug 23 23:29:45 2010 UTC (9 years, 2 months ago) by gdpusch
Branch: MAIN
CVS Tags: HEAD, mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, myrast_rel40, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119, rast_rel_2011_0928, rast_rel_2014_0729, rast_rel_2014_0912
Changes since 1.11: +11 -2 lines
Diff to previous 1.11
Updated search for executables to revised software environment.

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 1 21:18:30 2009 UTC (10 years, 7 months ago) by arodri7
Branch: MAIN
CVS Tags: rast_rel_2009_05_18, rast_rel_2009_07_09, rast_rel_2009_0925, rast_rel_2010_0118, rast_rel_2010_0526
Changes since 1.10: +1 -1 lines
Diff to previous 1.10
 correction

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 1 21:00:25 2009 UTC (10 years, 7 months ago) by arodri7
Branch: MAIN
Changes since 1.9: +15 -4 lines
Diff to previous 1.9
correct double truncated MGA calls

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Mar 25 19:05:57 2009 UTC (10 years, 7 months ago) by arodri7
Branch: MAIN
Changes since 1.8: +19 -6 lines
Diff to previous 1.8
added ability to output new sequences as nucleotides

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Mar 21 21:46:39 2009 UTC (10 years, 7 months ago) by gdpusch
Branch: MAIN
Changes since 1.7: +92 -86 lines
Diff to previous 1.7
Stuck in hack to handle truncated STARTs from MGA. Not currently handling partials from MG. Suggest doing a major rewrite using FIG and FIGV sequence and locus functions; current code duplicates FIG and FIGV functionality, with hacks.

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Mar 18 16:55:21 2009 UTC (10 years, 8 months ago) by arodri7
Branch: MAIN
Changes since 1.6: +4 -4 lines
Diff to previous 1.6
added fragment end and start correction

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Mar 18 16:51:27 2009 UTC (10 years, 8 months ago) by arodri7
Branch: MAIN
Changes since 1.5: +11 -4 lines
Diff to previous 1.5
added fragment end and start correction

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Mar 14 15:26:21 2009 UTC (10 years, 8 months ago) by arodri7
Branch: MAIN
CVS Tags: rast_rel_2009_03_26
Changes since 1.4: +40 -31 lines
Diff to previous 1.4
revised errors

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Mar 9 18:02:43 2009 UTC (10 years, 8 months ago) by arodri7
Branch: MAIN
Changes since 1.3: +196 -34 lines
Diff to previous 1.3
corrected parsing errors on using mga

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Mar 4 16:22:26 2009 UTC (10 years, 8 months ago) by arodri7
Branch: MAIN
Changes since 1.2: +11 -1 lines
Diff to previous 1.2
add changes

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Nov 16 17:00:52 2008 UTC (11 years ago) by arodri7
Branch: MAIN
CVS Tags: rast_rel_2008_12_18, rast_rel_2009_02_05
Changes since 1.1: +1 -1 lines
Diff to previous 1.1
update metagene process

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Nov 3 21:11:46 2008 UTC (11 years ago) by arodri7
Branch: MAIN
CVS Tags: mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, rast_rel_2008_11_24
changes to figfam update scripts

This form allows you to request diffs between any two revisions of this file. For each of the two "sides" of the diff, select a symbolic revision name using the selection box, or choose 'Use Text Field' and enter a numeric revision.

  Diffs between and
  Type of Diff should be a

Sort log by:

MCS Webmaster
ViewVC Help
Powered by ViewVC 1.0.3